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Maryann E. Martone - Publications

Affiliations: 
University of California, San Diego, La Jolla, CA 
Area:
neuroinformatics, neuroanatomy
Website:
http://ncmir.ucsd.edu/
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Year Citation  Score
2023 Hawrylycz M, Martone ME, Ascoli GA, Bjaalie JG, Dong HW, Ghosh SS, Gillis J, Hertzano R, Haynor DR, Hof PR, Kim Y, Lein E, Liu Y, Miller JA, Mitra PP, et al. A guide to the BRAIN Initiative Cell Census Network data ecosystem. Plos Biology. 21: e3002133. PMID 37390046 DOI: 10.1371/journal.pbio.3002133  0.711
2022 Bandrowski A, Pairish M, Eckmann P, Grethe J, Martone ME. The Antibody Registry: ten years of registering antibodies. Nucleic Acids Research. PMID 36370112 DOI: 10.1093/nar/gkac927  0.725
2022 Surles-Zeigler MC, Sincomb T, Gillespie TH, de Bono B, Bresnahan J, Mawe GM, Grethe JS, Tappan S, Heal M, Martone ME. Extending and using anatomical vocabularies in the stimulating peripheral activity to relieve conditions project. Frontiers in Neuroinformatics. 16: 819198. PMID 36090663 DOI: 10.3389/fninf.2022.819198  0.626
2022 Chou A, Torres-Espín A, Huie JR, Krukowski K, Lee S, Nolan A, Guglielmetti C, Hawkins BE, Chaumeil MM, Manley GT, Beattie MS, Bresnahan JC, Martone ME, Grethe JS, Rosi S, et al. Empowering Data Sharing and Analytics through the Open Data Commons for Traumatic Brain Injury Research. Neurotrauma Reports. 3: 139-157. PMID 35403104 DOI: 10.1089/neur.2021.0061  0.607
2022 Poline JB, Kennedy DN, Sommer FT, Ascoli GA, Van Essen DC, Ferguson AR, Grethe JS, Hawrylycz MJ, Thompson PM, Poldrack RA, Ghosh SS, Keator DB, Athey TL, Vogelstein JT, Mayberg HS, ... Martone ME, et al. Is Neuroscience FAIR? A Call for Collaborative Standardisation of Neuroscience Data. Neuroinformatics. PMID 35061216 DOI: 10.1007/s12021-021-09557-0  0.759
2021 Osanlouy M, Bandrowski A, de Bono B, Brooks D, Cassarà AM, Christie R, Ebrahimi N, Gillespie T, Grethe JS, Guercio LA, Heal M, Lin M, Kuster N, Martone ME, Neufeld E, et al. The SPARC DRC: Building a Resource for the Autonomic Nervous System Community. Frontiers in Physiology. 12: 693735. PMID 34248680 DOI: 10.3389/fphys.2021.693735  0.76
2021 Hsu CN, Chang CH, Poopradubsil T, Lo A, William KA, Lin KW, Bandrowski A, Ozyurt IB, Grethe JS, Martone ME. Antibody Watch: Text mining antibody specificity from the literature. Plos Computational Biology. 17: e1008967. PMID 34043624 DOI: 10.1371/journal.pcbi.1008967  0.725
2021 Palmer RHC, Johnson EC, Won H, Polimanti R, Kapoor M, Chitre A, Bogue MA, Benca-Bachman CE, Parker CC, Ursu O, Verma A, Reynolds T, Ernst J, Bray M, Kwon SB, ... ... Martone M, et al. Integration of Evidence across Human and Model Organism Studies: A Meeting Report. Genes, Brain, and Behavior. e12738. PMID 33893716 DOI: 10.1111/gbb.12738  0.643
2021 Abrams MB, Bjaalie JG, Das S, Egan GF, Ghosh SS, Goscinski WJ, Grethe JS, Kotaleski JH, Ho ETW, Kennedy DN, Lanyon LJ, Leergaard TB, Mayberg HS, Milanesi L, Mouček R, ... ... Martone ME, et al. Correction to: A Standards Organization for Open and FAIR Neuroscience: the International Neuroinformatics Coordinating Facility. Neuroinformatics. PMID 33851344 DOI: 10.1007/s12021-021-09522-x  0.56
2021 Abrams MB, Bjaalie JG, Das S, Egan GF, Ghosh SS, Goscinski WJ, Grethe JS, Kotaleski JH, Ho ETW, Kennedy DN, Lanyon LJ, Leergaard TB, Mayberg HS, Milanesi L, Mouček R, ... ... Martone ME, et al. A Standards Organization for Open and FAIR Neuroscience: the International Neuroinformatics Coordinating Facility. Neuroinformatics. PMID 33506383 DOI: 10.1007/s12021-020-09509-0  0.614
2020 Menke J, Roelandse M, Ozyurt B, Martone M, Bandrowski A. The Rigor and Transparency Index Quality Metric for Assessing Biological and Medical Science Methods. Iscience. 23: 101698. PMID 33196023 DOI: 10.1016/j.isci.2020.101698  0.602
2020 Lin D, Crabtree J, Dillo I, Downs RR, Edmunds R, Giaretta D, De Giusti M, L'Hours H, Hugo W, Jenkyns R, Khodiyar V, Martone ME, Mokrane M, Navale V, Petters J, et al. The TRUST Principles for digital repositories. Scientific Data. 7: 144. PMID 32409645 DOI: 10.1038/S41597-020-0486-7  0.323
2020 Katz DS, Chue Hong NP, Clark T, Fenner M, Martone ME. Software and Data Citation Computing in Science & Engineering. 22: 4-7. DOI: 10.1109/Mcse.2020.2969730  0.332
2020 Hsu C, Bandrowski AE, Gillespie TH, Udell J, Lin K, Ozyurt IB, Grethe JS, Martone ME. Comparing the Use of Research Resource Identifiers and Natural Language Processing for Citation of Databases, Software, and Other Digital Artifacts Computing in Science & Engineering. 22: 22-32. DOI: 10.1109/Mcse.2019.2952838  0.769
2020 Lin K, Bandrowski AE, Guo V, Hsu C, Ozyurt IB, Pascual L, Grethe JS, Martone ME. Improving Scientific Rigor and Reproducibility: Check Research Resources Information When Planning Experiments Using dkNET The Faseb Journal. 34: 1-1. DOI: 10.1096/Fasebj.2020.34.S1.04748  0.755
2019 Prager EM, Chambers KE, Plotkin JL, McArthur DL, Bandrowski AE, Bansal N, Martone ME, Bergstrom HC, Bespalov A, Graf C. Improving transparency and scientific rigor in academic publishing. Cancer Reports (Hoboken, N.J.). 2: e1150. PMID 32721132 DOI: 10.1002/cnr2.1150  0.624
2019 Fouad K, Bixby JL, Callahan A, Grethe JS, Jakeman LB, Lemmon VP, Magnuson DS, Martone ME, Nielson JL, Schwab J, Taylor-Burds C, Tetzlaff W, Torres-Espín A, Ferguson AR. FAIR SCI Ahead: the evolution of the Open Data Commons for preclinical spinal cord injury research (ODC-SCI.org). Journal of Neurotrauma. PMID 31608767 DOI: 10.1089/Neu.2019.6674  0.627
2019 Fenner M, Crosas M, Grethe JS, Kennedy D, Hermjakob H, Rocca-Serra P, Durand G, Berjon R, Karcher S, Martone M, Clark T. A data citation roadmap for scholarly data repositories. Scientific Data. 6: 28. PMID 30971690 DOI: 10.1038/S41597-019-0031-8  0.642
2019 Wilkinson MD, Dumontier M, Jan Aalbersberg I, Appleton G, Axton M, Baak A, Blomberg N, Boiten JW, da Silva Santos LB, Bourne PE, Bouwman J, Brookes AJ, Clark T, Crosas M, Dillo I, ... ... Martone ME, et al. Addendum: The FAIR Guiding Principles for scientific data management and stewardship. Scientific Data. 6: 6. PMID 30890711 DOI: 10.1038/S41597-019-0009-6  0.618
2019 Kennedy DN, Abraham SA, Bates JF, Crowley A, Ghosh S, Gillespie T, Goncalves M, Grethe JS, Halchenko YO, Hanke M, Haselgrove C, Hodge SM, Jarecka D, Kaczmarzyk J, Keator DB, ... ... Martone ME, et al. Everything Matters: The ReproNim Perspective on Reproducible Neuroimaging. Frontiers in Neuroinformatics. 13: 1. PMID 30792636 DOI: 10.3389/Fninf.2019.00001  0.644
2019 Babic Z, Capes-Davis A, Martone ME, Bairoch A, Ozyurt IB, Gillespie TH, Bandrowski AE. Incidences of problematic cell lines are lower in papers that use RRIDs to identify cell lines. Elife. 8. PMID 30693867 DOI: 10.7554/Elife.41676  0.619
2019 Lin K, Bandrowski A, Gillespie T, Go J, Hagstrom S, Hsu C, Ozyurt I, Grethe J, Martone M. MON-176 Making Informed Decisions on the Selection of Antibodies Using dkNET (NIDDK Information Network) Journal of the Endocrine Society. 3. DOI: 10.1210/Js.2019-Mon-176  0.731
2018 Prager EM, Chambers KE, Plotkin JL, McArthur DL, Bandrowski AE, Bansal N, Martone ME, Bergstrom HC, Bespalov A, Graf C. Improving transparency and scientific rigor in academic publishing. Brain and Behavior. e01141. PMID 30506879 DOI: 10.1002/Brb3.1141  0.656
2018 Prager EM, Chambers KE, Plotkin JL, McArthur DL, Bandrowski AE, Bansal N, Martone ME, Bergstrom HC, Bespalov A, Graf C. Improving transparency and scientific rigor in academic publishing. Journal of Neuroscience Research. PMID 30506706 DOI: 10.1002/Jnr.24340  0.656
2018 Cousijn H, Kenall A, Ganley E, Harrison M, Kernohan D, Lemberger T, Murphy F, Polischuk P, Taylor S, Martone M, Clark T. A data citation roadmap for scientific publishers. Scientific Data. 5: 180259. PMID 30457573 DOI: 10.1038/Sdata.2018.259  0.325
2018 Wimalaratne SM, Juty N, Kunze J, Janée G, McMurry JA, Beard N, Jimenez R, Grethe JS, Hermjakob H, Martone ME, Clark T. Uniform resolution of compact identifiers for biomedical data. Scientific Data. 5: 180029. PMID 29737976 DOI: 10.1038/Sdata.2018.29  0.649
2018 Martone ME, Garcia-Castro A, VandenBos GR. Data sharing in psychology. The American Psychologist. 73: 111-125. PMID 29481105 DOI: 10.1037/Amp0000242  0.344
2018 Martone M, Goscinski W, Das S, Yamaguchi Y, Ho ETW, Leergaard T, Hellgren-Kotaleski J, Wachtler T, Kennedy D, Abrams M. Call for community review of the Brain Imaging Data Structure – a standard for organizing and describing MRI data sets F1000research. 7. DOI: 10.7490/F1000Research.1115998.1  0.309
2018 LIN K, BANDROWSKI A, GO J, OZYURT IB, GILLESPIE T, GRETHE JS, MARTONE ME. Discover and Track Obesity Relevant Research Resources Using dkNET (NIDDK Information Network) Diabetes. 67: 2006-P. DOI: 10.2337/Db18-2006-P  0.775
2018 Staines H, Martone ME. Community feedback on scholarly content: why it is important and why it should be preserved Insights the Uksg Journal. 31. DOI: 10.1629/Uksg.418  0.321
2018 Martone M, Grethe J. 28. The Neuroscience Big Data Landscape and FAIR Biological Psychiatry. 83. DOI: 10.1016/J.Biopsych.2018.02.045  0.619
2017 Newton AJH, Seidenstein AH, McDougal RA, Pérez-Cervera A, Huguet G, M-Seara T, Haimerl C, Angulo-Garcia D, Torcini A, Cossart R, Malvache A, Skiker K, Maouene M, Ragognetti G, Lorusso L, ... ... Martone M, et al. 26th Annual Computational Neuroscience Meeting (CNS*2017): Part 3 Bmc Neuroscience. 18. DOI: 10.1186/S12868-017-0372-1  0.623
2016 Bandrowski AE, Martone ME. RRIDs: A Simple Step toward Improving Reproducibility through Rigor and Transparency of Experimental Methods. Neuron. 90: 434-6. PMID 27151636 DOI: 10.1016/J.Neuron.2016.04.030  0.668
2016 Bandrowski A, Brush M, Grethe JS, Haendel MA, Kennedy DN, Hill S, Hof PR, Martone ME, Pols M, Tan SC, Washington N, Zudilova-Seinstra E, Vasilevsky N. The Resource Identification Initiative: a cultural shift in publishing. Brain and Behavior. 6: e00417. PMID 27110440 DOI: 10.1002/Brb3.417  0.777
2016 Wilkinson MD, Dumontier M, Aalbersberg IJ, Appleton G, Axton M, Baak A, Blomberg N, Boiten JW, da Silva Santos LB, Bourne PE, Bouwman J, Brookes AJ, Clark T, Crosas M, Dillo I, ... ... Martone ME, et al. The FAIR Guiding Principles for scientific data management and stewardship. Scientific Data. 3: 160018. PMID 26978244 DOI: 10.1038/Sdata.2016.18  0.648
2016 Ozyurt IB, Grethe JS, Martone ME, Bandrowski AE. Resource Disambiguator for the Web: Extracting Biomedical Resources and Their Citations from the Scientific Literature. Plos One. 11: e0146300. PMID 26730820 DOI: 10.1371/Journal.Pone.0146300  0.777
2016 Bandrowski A, Brush M, Grethe JS, Haendel MA, Kennedy DN, Hill S, Hof PR, Martone ME, Pols M, Tan SC, Washington N, Zudilova-Seinstra E, Vasilevsky N. The Resource Identification Initiative: A cultural shift in publishing. The Journal of Comparative Neurology. 524: 8-22. PMID 26599696 DOI: 10.1002/Cne.23913  0.776
2016 Hastings J, Frishkoff G, Smith B, Jensen M, Poldrack R, Lomax J, Bandrowski A, Imam F, Turner J, Martone M, Nowakowski P. Interdyscyplinarne perspektywy rozwoju, integracji i zastosowań ontologii poznawczych Avant: Journal of the Philosophical-Interdisciplinary Vanguard. 101-117. DOI: 10.26913/70302016.0109.0007  0.633
2016 Bandrowski A, Brush M, Grethe JS, Haendel MA, Kennedy DN, Hill S, Hof PR, Martone ME, Pols M, Tan SC, Washington N, Zudilova-Seinstra E, Vasilevsky N. The Resource Identification Initiative: A cultural shift in publishing Brain and Behavior. 6: 1-14. DOI: 10.1002/brb3.417  0.557
2015 Bandrowski A, Brush M, Grethe JS, Haendel MA, Kennedy DN, Hill S, Hof PR, Martone ME, Pols M, Tan S, Washington N, Zudilova-Seinstra E, Vasilevsky N. The Resource Identification Initiative: A cultural shift in publishing. F1000research. 4: 134. PMID 26594330 DOI: 10.12688/F1000Research.6555.2  0.777
2015 Bandrowski A, Brush M, Grethe JS, Haendel MA, Kennedy DN, Hill S, Hof PR, Martone ME, Pols M, Tan SS, Washington N, Zudilova-Seinstra E, Vasilevsky N. The Resource Identification Initiative: A Cultural Shift in Publishing. Neuroinformatics. PMID 26589523 DOI: 10.1007/S12021-015-9284-3  0.777
2015 Sivagnanam S, Majumdar A, Yoshimoto K, Astakhov V, Bandrowski A, Martone M, Carnevale NT. Early experiences in developing and managing the neuroscience gateway. Concurrency and Computation : Practice & Experience. 27: 473-488. PMID 26523124 DOI: 10.1002/Cpe.3283  0.656
2015 Whetzel PL, Grethe JS, Banks DE, Martone ME. The NIDDK Information Network: A Community Portal for Finding Data, Materials, and Tools for Researchers Studying Diabetes, Digestive, and Kidney Diseases. Plos One. 10: e0136206. PMID 26393351 DOI: 10.1371/Journal.Pone.0136206  0.676
2014 Ferguson AR, Nielson JL, Cragin MH, Bandrowski AE, Martone ME. Big data from small data: data-sharing in the 'long tail' of neuroscience. Nature Neuroscience. 17: 1442-7. PMID 25349910 DOI: 10.1038/Nn.3838  0.676
2014 Hastings J, Frishkoff GA, Smith B, Jensen M, Poldrack RA, Lomax J, Bandrowski A, Imam F, Turner JA, Martone ME. Interdisciplinary perspectives on the development, integration, and application of cognitive ontologies. Frontiers in Neuroinformatics. 8: 62. PMID 24999329 DOI: 10.3389/Fninf.2014.00062  0.655
2014 Nichols BN, Mejino JL, Detwiler LT, Nilsen TT, Martone ME, Turner JA, Rubin DL, Brinkley JF. Neuroanatomical domain of the foundational model of anatomy ontology. Journal of Biomedical Semantics. 5: 1. PMID 24398054 DOI: 10.1186/2041-1480-5-1  0.342
2014 Carnevale T, Majumdar A, Sivagnanam S, Yoshimoto K, Astakhov V, Bandrowski A, Martone M. The neuroscience gateway portal: high performance computing made easy Bmc Neuroscience. 15. DOI: 10.1186/1471-2202-15-S1-P101  0.662
2014 Whetzel PL, Grethe JS, Bandrowski A, Banks D, Condit C, Gupta A, Larson SD, Li Y, Ozyurt B, Stagg A, Martone ME, Marenco L, Miller PL, Wang R, Shepherd GM. SciCrunch: A cooperative and collaborative data and resource discovery platform for scientific communities Ceur Workshop Proceedings. 1327: 102-103.  0.675
2013 Martone ME, Ascoli GA. Connecting connectomes. Neuroinformatics. 11: 389-92. PMID 24096724 DOI: 10.1007/s12021-013-9207-0  0.409
2013 Roncaglia P, Martone ME, Hill DP, Berardini TZ, Foulger RE, Imam FT, Drabkin H, Mungall CJ, Lomax J. The Gene Ontology (GO) Cellular Component Ontology: integration with SAO (Subcellular Anatomy Ontology) and other recent developments. Journal of Biomedical Semantics. 4: 20. PMID 24093723 DOI: 10.1186/2041-1480-4-20  0.333
2013 Larson SD, Martone ME. NeuroLex.org: an online framework for neuroscience knowledge. Frontiers in Neuroinformatics. 7: 18. PMID 24009581 DOI: 10.3389/Fninf.2013.00018  0.694
2013 Maynard SM, Mungall CJ, Lewis SE, Imam FT, Martone ME. A knowledge based approach to matching human neurodegenerative disease and animal models. Frontiers in Neuroinformatics. 7: 7. PMID 23717278 DOI: 10.3389/Fninf.2013.00007  0.309
2013 Orloff DN, Iwasa JH, Martone ME, Ellisman MH, Kane CM. The cell: an image library-CCDB: a curated repository of microscopy data. Nucleic Acids Research. 41: D1241-50. PMID 23203874 DOI: 10.1093/Nar/Gks1257  0.579
2013 Gupta A, Condit C, Grethe JS, Bandrowski A, Qian X, Martone ME. Semantic query reformulation - The NIF experience Acm International Conference Proceeding Series. DOI: 10.1145/2484838.2484839  0.715
2013 Sivagnanam S, Astakhov V, Yoshimoto K, Carnevale T, Martone M, Majumdar A, Bandrowski A. A neuroscience gateway - Software and implementation Acm International Conference Proceeding Series. DOI: 10.1145/2484762.2484816  0.584
2012 Cachat J, Bandrowski A, Grethe JS, Gupta A, Astakhov V, Imam F, Larson SD, Martone ME. A survey of the neuroscience resource landscape: perspectives from the neuroscience information framework. International Review of Neurobiology. 103: 39-68. PMID 23195120 DOI: 10.1016/B978-0-12-388408-4.00003-4  0.801
2012 Imam FT, Larson SD, Bandrowski A, Grethe JS, Gupta A, Martone ME. Development and use of Ontologies Inside the Neuroscience Information Framework: A Practical Approach. Frontiers in Genetics. 3: 111. PMID 22737162 DOI: 10.3389/Fgene.2012.00111  0.802
2012 Burette AC, Lesperance T, Crum J, Martone M, Volkmann N, Ellisman MH, Weinberg RJ. Electron tomographic analysis of synaptic ultrastructure. The Journal of Comparative Neurology. 520: 2697-711. PMID 22684938 DOI: 10.1002/Cne.23067  0.572
2012 Hamilton DJ, Shepherd GM, Martone ME, Ascoli GA. An ontological approach to describing neurons and their relationships. Frontiers in Neuroinformatics. 6: 15. PMID 22557965 DOI: 10.3389/Fninf.2012.00015  0.666
2012 Bandrowski AE, Cachat J, Li Y, Müller HM, Sternberg PW, Ciccarese P, Clark T, Marenco L, Wang R, Astakhov V, Grethe JS, Martone ME. A hybrid human and machine resource curation pipeline for the Neuroscience Information Framework. Database : the Journal of Biological Databases and Curation. 2012: bas005. PMID 22434839 DOI: 10.1093/Database/Bas005  0.787
2012 Giuly RJ, Martone ME, Ellisman MH. Method: automatic segmentation of mitochondria utilizing patch classification, contour pair classification, and automatically seeded level sets. Bmc Bioinformatics. 13: 29. PMID 22321695 DOI: 10.1186/1471-2105-13-29  0.563
2012 Imam FT, Larson S, Bandrowski A, Grethe JS, Gupta A, Martone ME. Maturation of neuroscience information framework: An ontology driven information system for neuroscience Frontiers in Artificial Intelligence and Applications. 239: 15-28. DOI: 10.3233/978-1-61499-084-0-15  0.768
2012 Astakhov V, Bandrowski A, Gupta A, Kulungowski AW, Grethe JS, Bouwer J, Molina T, Rowley V, Penticoff S, Terada M, Wong W, Hakozaki H, Kwon O, Martone ME, Ellisman M. Prototype of Kepler processing workflows for microscopy and neuroinformatics Procedia Computer Science. 9: 1595-1603. DOI: 10.1016/j.procs.2012.04.175  0.762
2011 Berlanga ML, Phan S, Bushong EA, Wu S, Kwon O, Phung BS, Lamont S, Terada M, Tasdizen T, Martone ME, Ellisman MH. Three-dimensional reconstruction of serial mouse brain sections: solution for flattening high-resolution large-scale mosaics. Frontiers in Neuroanatomy. 5: 17. PMID 21629828 DOI: 10.3389/Fnana.2011.00017  0.729
2011 Berlanga ML, Price DL, Phung BS, Giuly R, Terada M, Yamada N, Cyr M, Caron MG, Laakso A, Martone ME, Ellisman MH. Multiscale imaging characterization of dopamine transporter knockout mice reveals regional alterations in spine density of medium spiny neurons. Brain Research. 1390: 41-9. PMID 21439946 DOI: 10.1016/J.Brainres.2011.03.044  0.563
2011 Akil H, Martone ME, Van Essen DC. Challenges and opportunities in mining neuroscience data. Science (New York, N.Y.). 331: 708-12. PMID 21311009 DOI: 10.1126/Science.1199305  0.567
2011 Hawrylycz M, Baldock RA, Burger A, Hashikawa T, Johnson GA, Martone M, Ng L, Lau C, Larson SD, Larsen SD, Nissanov J, Puelles L, Ruffins S, Verbeek F, Zaslavsky I, et al. Digital atlasing and standardization in the mouse brain. Plos Computational Biology. 7: e1001065. PMID 21304938 DOI: 10.1371/Journal.Pcbi.1001065  0.701
2011 Cone A, Boassa D, Fuller K, Martone M, Sosinsky G. Comparison of Pannexin1 ATP Channel Expression in Rat Brain Tissue Microscopy and Microanalysis. 17: 336-337. DOI: 10.1017/S1431927611002558  0.631
2011 Bouwer J, Astakov V, Wong W, Molina T, Rowley V, Lamont S, Hakozaki H, Kwon O, Kulungowski A, Terada M, Peltier S, Martone M, Ellisman M. Petabyte Data Management and Automated Data Workflow in Neuroscience: Delivering Data from the Instruments to the Researcher's Fingertips Microscopy and Microanalysis. 17: 276-277. DOI: 10.1017/S143192761100225X  0.776
2011 Ellisman M, Shu X, Lev-Ram V, Deerinck T, Tsien R, Lamont S, Martinez J, Berlanga M, Bushong E, Martone M, Larson S. Bridging Gaps in Imaging by Applying EM Tomography and Serial Block Face SEM, Including a New Genetically Encoded Tag for Correlated Light and 3D Electron Microscopy of Intact Cells, Tissues and Organisms: Integrating the Resulting Correlated Image Data Using the Whole Brain Catalog Microscopy and Microanalysis. 17: 2-3. DOI: 10.1017/S1431927611000882  0.76
2011 Mungall CJ, Anderson D, Bandrowski A, Canada B, Chatyr-Aryamontri A, Cheng K, Conn PM, Dolinski K, Ellisman M, Eppig J, Grethe JS, Kemnitz J, Iadonato S, Larson SD, Magness C, ... Martone ME, et al. An ontology-based approach to linking model organisms and resources to human diseases Ceur Workshop Proceedings. 833: 263-265.  0.688
2011 Imam FT, Larson SD, Grethe JS, Gupta A, Bandrowski A, Martone ME. NIFSTD and neurolex: A comprehensive neuroscience ontology development based on multiple biomedical ontologies and community involvement Ceur Workshop Proceedings. 833: 349-356.  0.583
2010 Turner JA, Mejino JL, Brinkley JF, Detwiler LT, Lee HJ, Martone ME, Rubin DL. Application of neuroanatomical ontologies for neuroimaging data annotation. Frontiers in Neuroinformatics. 4. PMID 20725521 DOI: 10.3389/Fninf.2010.00010  0.33
2009 Larson SD, Martone ME. Ontologies for Neuroscience: What are they and What are they Good for? Frontiers in Neuroscience. 3: 60-7. PMID 19753098 DOI: 10.3389/Neuro.01.007.2009  0.698
2009 Hayashi T, Martone ME, Yu Z, Thor A, Doi M, Holst MJ, Ellisman MH, Hoshijima M. Three-dimensional electron microscopy reveals new details of membrane systems for Ca2+ signaling in the heart. Journal of Cell Science. 122: 1005-13. PMID 19295127 DOI: 10.1242/Jcs.028175  0.54
2009 Larson SD, Maynard SM, Imam F, Martone ME. NeuroLex.org-A semantic wiki for neuroinformatics based on the NIF standard ontology Ceur Workshop Proceedings. 559. DOI: 10.3389/Conf.Neuro.11.2009.08.078  0.643
2009 Larson S, Maynard S, Imam F, Martone M. NeuroLex.org - A semantic wiki for neuroinformatics based on the NIF Standard Ontology Frontiers in Neuroinformatics. 3. DOI: 10.3389/conf.neuro.11.2009.08.078  0.614
2009 Martone M, Mosca E, Alfieri R, Viti F, Merelli I, Milanesi L. The Neuroscience Information Framework (NIF): a neuroscience-centered portal for searching and accessing diverse resources Frontiers in Neuroinformatics. 3. DOI: 10.3389/Conf.Neuro.11.2009.08.073  0.324
2009 Larson S, Aprea C, Maynard S, Imam F, Ellisman M, Martone M. A multi-scale spatial and semantic knowledge framework for neuroanatomy Frontiers in Neuroinformatics. 3. DOI: 10.3389/Conf.Neuro.11.2009.08.015  0.721
2009 Maynard S, Fong L, Larson S, Memon A, Lewis S, Mungall C, Martone M. Using ontologies to define the relation between neurodegenerative disease and associated animal model phenotypes Frontiers in Neuroinformatics. 3. DOI: 10.3389/Conf.Neuro.11.2009.08.009  0.627
2009 Young L, Tu SW, Tennakoon L, Vismer D, Astakhov V, Gupta A, Grethe JS, Martone ME, Das AK, McAuliffe MJ. Ontology driven data integration for autism research Proceedings - Ieee Symposium On Computer-Based Medical Systems. DOI: 10.1109/CBMS.2009.5255362  0.601
2009 Hawrylycz M, Boline J, Burger A, Hashikawa T, Johnson GA, Martone M, Ng L, Nissanov J, Puelles L, Ruffins S, Verbeek F, Zaslavsky I. The INCF Digital Atlasing Program: Report on Digital Atlasing Standards in the Rodent Brain Nature Precedings. 1-1. DOI: 10.1038/Npre.2009.4000.1  0.308
2008 Bug W, Astahkov V, Boline J, Fennema-Notestine C, Grethe JS, Gupta A, Kennedy DN, Rubin DL, Sanders B, Turner JA, Martone ME. Data federation in the Biomedical Informatics Research Network: tools for semantic annotation and query of distributed multiscale brain data. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 1220. PMID 18999211  0.729
2008 Buccigrossi R, Ellisman M, Grethe J, Haselgrove C, Kennedy DN, Martone M, Preuss N, Reynolds K, Sullivan M, Turner J, Wagner K. The Neuroimaging Informatics Tools and Resources Clearinghouse (NITRC). Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 1000. PMID 18999128 DOI: 10.3389/Conf.Neuro.11.2008.01.122  0.716
2008 Marenco L, Ascoli GA, Martone ME, Shepherd GM, Miller PL. The NIF LinkOut broker: a web resource to facilitate federated data integration using NCBI identifiers. Neuroinformatics. 6: 219-27. PMID 18975149 DOI: 10.1007/S12021-008-9025-Y  0.665
2008 Bug WJ, Ascoli GA, Grethe JS, Gupta A, Fennema-Notestine C, Laird AR, Larson SD, Rubin D, Shepherd GM, Turner JA, Martone ME. The NIFSTD and BIRNLex vocabularies: building comprehensive ontologies for neuroscience. Neuroinformatics. 6: 175-94. PMID 18975148 DOI: 10.1007/S12021-008-9032-Z  0.797
2008 Gupta A, Bug W, Marenco L, Qian X, Condit C, Rangarajan A, Müller HM, Miller PL, Sanders B, Grethe JS, Astakhov V, Shepherd G, Sternberg PW, Martone ME. Federated access to heterogeneous information resources in the Neuroscience Information Framework (NIF). Neuroinformatics. 6: 205-17. PMID 18958629 DOI: 10.1007/S12021-008-9033-Y  0.71
2008 Marenco L, Li Y, Martone ME, Sternberg PW, Shepherd GM, Miller PL. Issues in the design of a pilot concept-based query interface for the neuroinformatics information framework. Neuroinformatics. 6: 229-39. PMID 18953674 DOI: 10.1007/S12021-008-9035-9  0.524
2008 Gardner D, Akil H, Ascoli GA, Bowden DM, Bug W, Donohue DE, Goldberg DH, Grafstein B, Grethe JS, Gupta A, Halavi M, Kennedy DN, Marenco L, Martone ME, Miller PL, et al. The neuroscience information framework: a data and knowledge environment for neuroscience. Neuroinformatics. 6: 149-60. PMID 18946742 DOI: 10.1007/S12021-008-9024-Z  0.805
2008 Martone ME, Tran J, Wong WW, Sargis J, Fong L, Larson S, Lamont SP, Gupta A, Ellisman MH. The cell centered database project: an update on building community resources for managing and sharing 3D imaging data. Journal of Structural Biology. 161: 220-31. PMID 18054501 DOI: 10.1016/J.Jsb.2007.10.003  0.766
2008 Sosinsky GE, Crum J, Jones YZ, Lanman J, Smarr B, Terada M, Martone ME, Deerinck TJ, Johnson JE, Ellisman MH. The combination of chemical fixation procedures with high pressure freezing and freeze substitution preserves highly labile tissue ultrastructure for electron tomography applications. Journal of Structural Biology. 161: 359-71. PMID 17962040 DOI: 10.1016/J.Jsb.2007.09.002  0.553
2007 Larson SD, Fong LL, Gupta A, Condit C, Bug WJ, Martone ME. A formal ontology of subcellular neuroanatomy. Frontiers in Neuroinformatics. 1: 3. PMID 18974798 DOI: 10.3389/Neuro.11.003.2007  0.693
2007 Marenco L, Nadkarni P, Martone M, Gupta A. Interoperability across neuroscience databases. Methods in Molecular Biology (Clifton, N.J.). 401: 23-36. PMID 18368358 DOI: 10.1007/978-1-59745-520-6_2  0.35
2007 Toni N, Teng EM, Bushong EA, Aimone JB, Zhao C, Consiglio A, van Praag H, Martone ME, Ellisman MH, Gage FH. Synapse formation on neurons born in the adult hippocampus. Nature Neuroscience. 10: 727-34. PMID 17486101 DOI: 10.1038/Nn1908  0.707
2007 Chang SY, Zagha E, Kwon ES, Ozaita A, Bobik M, Martone ME, Ellisman MH, Heintz N, Rudy B. Distribution of Kv3.3 potassium channel subunits in distinct neuronal populations of mouse brain. The Journal of Comparative Neurology. 502: 953-72. PMID 17444489 DOI: 10.1002/Cne.21353  0.564
2007 Martone ME, Sargis J, Tran J, Wong WW, Jiles H, Mangir C. Database resources for cellular electron microscopy. Methods in Cell Biology. 79: 799-822. PMID 17327184 DOI: 10.1016/S0091-679X(06)79031-8  0.391
2007 Bouwer JC, Mackey MR, Lawrence A, Deerinck TJ, Jones YZ, Terada M, Martone ME, Peltier ST, Ellisman MH. The application of energy-filtered electron microscopy to tomography of thick, selectively stained biological samples. Methods in Cell Biology. 79: 643-60. PMID 17327179 DOI: 10.1016/S0091-679X(06)79026-4  0.763
2007 Deerinck TJ, Giepmans BN, Smarr BL, Martone ME, Ellisman MH. Light and electron microscopic localization of multiple proteins using quantum dots. Methods in Molecular Biology (Clifton, N.J.). 374: 43-53. PMID 17237528 DOI: 10.1385/1-59745-369-2:43  0.564
2007 Martone M, Price D, Thor A, Terada M, Berlanga M, Memon A, Wong W, Zaslavsky I, Ellisman M. Multiscale Investigation of the Mammalian Nervous System: Imaging and Informatics Microscopy and Microanalysis. 13. DOI: 10.1017/S143192760707715X  0.535
2007 Burette A, Crum J, Martone M, Ellisman M, Weinberg R. The Architecture of the Presynaptic Active Zone Microscopy and Microanalysis. 13. DOI: 10.1017/S1431927607074521  0.523
2006 Smalheiser NR, Torvik VI, Bischoff-Grethe A, Burhans LB, Gabriel M, Homayouni R, Kashef A, Martone ME, Perkins GA, Price DL, Talk AC, West R. Collaborative development of the Arrowsmith two node search interface designed for laboratory investigators. Journal of Biomedical Discovery and Collaboration. 1: 8. PMID 16817965 DOI: 10.1186/1747-5333-1-8  0.304
2006 Chow SK, Hakozaki H, Price DL, MacLean NA, Deerinck TJ, Bouwer JC, Martone ME, Peltier ST, Ellisman MH. Automated microscopy system for mosaic acquisition and processing. Journal of Microscopy. 222: 76-84. PMID 16774516 DOI: 10.1111/J.1365-2818.2006.01577.X  0.768
2006 Price DL, Chow SK, Maclean NA, Hakozaki H, Peltier S, Martone ME, Ellisman MH. High-resolution large-scale mosaic imaging using multiphoton microscopy to characterize transgenic mouse models of human neurological disorders. Neuroinformatics. 4: 65-80. PMID 16595859 DOI: 10.1385/Ni:4:1:65  0.595
2006 Astakhov V, Gupta A, Grethe JS, Ross E, Little D, Yilmaz A, Qian X, Santini S, Martone M, Ellisman M. Semantically based data integration environment for biomedical research Proceedings - Ieee Symposium On Computer-Based Medical Systems. 2006: 171-176. DOI: 10.1109/CBMS.2006.143  0.71
2006 Singh R, Schwarz N, Taesombut N, Lee D, Jeong B, Renambot L, Lin AW, West R, Otsuka H, Naito S, Peltier ST, Martone ME, Nozaki K, Leigh J, Ellisman MH. Real-time multi-scale brain data acquisition, assembly, and analysis using an end-to-end OptIPuter Future Generation Computer Systems. 22: 1032-1039. DOI: 10.1016/J.Future.2006.03.017  0.595
2005 Ouyang Y, Wong M, Capani F, Rensing N, Lee CS, Liu Q, Neusch C, Martone ME, Wu JY, Yamada K, Ellisman MH, Choi DW. Transient decrease in F-actin may be necessary for translocation of proteins into dendritic spines. The European Journal of Neuroscience. 22: 2995-3005. PMID 16367766 DOI: 10.1111/J.1460-9568.2005.04521.X  0.537
2005 Coggan JS, Bartol TM, Esquenazi E, Stiles JR, Lamont S, Martone ME, Berg DK, Ellisman MH, Sejnowski TJ. Evidence for ectopic neurotransmission at a neuronal synapse. Science (New York, N.Y.). 309: 446-51. PMID 16020730 DOI: 10.1126/Science.1108239  0.548
2005 Grethe JS, Baru C, Gupta A, James M, Ludaescher B, Martone ME, Papadopoulos PM, Peltier ST, Rajasekar A, Santini S, Zaslavsky IN, Ellisman MH. Biomedical informatics research network: building a national collaboratory to hasten the derivation of new understanding and treatment of disease. Studies in Health Technology and Informatics. 112: 100-9. PMID 15923720  0.711
2004 Bouwer JC, Mackey MR, Lawrence A, Deerinck TJ, Jones YZ, Terada M, Martone ME, Peltier S, Ellisman MH. Automated most-probable loss tomography of thick selectively stained biological specimens with quantitative measurement of resolution improvement. Journal of Structural Biology. 148: 297-306. PMID 15522778 DOI: 10.1016/J.Jsb.2004.08.005  0.766
2004 Bobik M, Ellisman MH, Rudy B, Martone ME. Potassium channel subunit Kv3.2 and the water channel aquaporin-4 are selectively localized to cerebellar pinceau. Brain Research. 1026: 168-78. PMID 15488478 DOI: 10.1016/J.Brainres.2004.07.088  0.553
2004 Martone ME, Gupta A, Ellisman MH. E-neuroscience: challenges and triumphs in integrating distributed data from molecules to brains. Nature Neuroscience. 7: 467-72. PMID 15114360 DOI: 10.1038/Nn1229  0.621
2004 Bushong EA, Martone ME, Ellisman MH. Maturation of astrocyte morphology and the establishment of astrocyte domains during postnatal hippocampal development. International Journal of Developmental Neuroscience : the Official Journal of the International Society For Developmental Neuroscience. 22: 73-86. PMID 15036382 DOI: 10.1016/J.Ijdevneu.2003.12.008  0.707
2004 Bouwer JC, Mackey M, Lawrence A, Deerinck TJ, Jones Y, Terada M, Martone ME, Peltier S, Ellisman MH. Automated energy filtered most probable loss tomography of thick selectively stained biological samples Microscopy and Microanalysis. 10: 1208-1209. DOI: 10.1017/S1431927604887762  0.736
2004 Price DL, Chow SK, Hakozaki H, Phung V, Smarr B, Peltier S, Martone ME, Ellisman MH. Application of a multi-photon high-resolution large-scale montage imaging technique to characterize transgenic mouse models of human neurodisorders Microscopy and Microanalysis. 10: 1482-1483. DOI: 10.1017/S1431927604886586  0.546
2003 Martone ME, Zhang S, Gupta A, Qian X, He H, Price DL, Wong M, Santini S, Ellisman MH. The cell-centered database: a database for multiscale structural and protein localization data from light and electron microscopy. Neuroinformatics. 1: 379-95. PMID 15043222 DOI: 10.1385/Ni:1:4:379  0.627
2003 Gupta A, Ludäscher B, Grethe JS, Martone ME. Towards a formalization of disease-specific ontologies for neuroinformatics. Neural Networks : the Official Journal of the International Neural Network Society. 16: 1277-92. PMID 14622884 DOI: 10.1016/J.Neunet.2003.07.008  0.616
2003 Mironov AA, Mironov AA, Beznoussenko GV, Trucco A, Lupetti P, Smith JD, Geerts WJ, Koster AJ, Burger KN, Martone ME, Deerinck TJ, Ellisman MH, Luini A. ER-to-Golgi carriers arise through direct en bloc protrusion and multistage maturation of specialized ER exit domains. Developmental Cell. 5: 583-94. PMID 14536060 DOI: 10.1016/S1534-5807(03)00294-6  0.553
2003 Bushong EA, Martone ME, Ellisman MH. Examination of the relationship between astrocyte morphology and laminar boundaries in the molecular layer of adult dentate gyrus. The Journal of Comparative Neurology. 462: 241-51. PMID 12794746 DOI: 10.1002/Cne.10728  0.694
2003 Zhang S, Price D, Qian X, Gupta A, Wong M, Ellisman M, Martone M. A Cell Centered Database (CCDB) for Multi-Scale Microscopy Data Management Microscopy and Microanalysis. 9: 1502-1503. DOI: 10.1017/S143192760344751X  0.57
2003 Martone ME, Zhang S, Peltier S, Lin AW, Lee D, Molina T, Gupta A, Ellisman MH. Informatics Resources for Electron Tomography Microscopy and Microanalysis. 9: 1164-1165. DOI: 10.1017/S1431927603445820  0.558
2003 Peltier ST, Lin AW, Lee D, Mock S, Lamont S, Molina T, Wong M, Dai L, Martone ME, Ellismann MH. The Telescience Portal for advanced tomography applications Journal of Parallel and Distributed Computing. 63: 539-550. DOI: 10.1016/S0743-7315(03)00061-3  0.376
2003 Ludäscher B, Gupta A, Martone ME. A model-based mediator system for scientific data management Bioinformatics: Managing Scientific Data. 335-370. DOI: 10.1016/B978-155860829-0/50014-0  0.337
2002 Martone ME, Gupta A, Wong M, Qian X, Sosinsky G, Ludäscher B, Ellisman MH. A cell-centered database for electron tomographic data. Journal of Structural Biology. 138: 145-55. PMID 12160711 DOI: 10.1016/S1047-8477(02)00006-0  0.622
2002 Ozaita A, Martone ME, Ellisman MH, Rudy B. Differential subcellular localization of the two alternatively spliced isoforms of the Kv3.1 potassium channel subunit in brain. Journal of Neurophysiology. 88: 394-408. PMID 12091563 DOI: 10.1152/Jn.2002.88.1.394  0.552
2002 Wiseman PW, Capani F, Squier JA, Martone ME. Counting dendritic spines in brain tissue slices by image correlation spectroscopy analysis. Journal of Microscopy. 205: 177-86. PMID 11879432 DOI: 10.1046/J.0022-2720.2001.00985.X  0.301
2002 Bushong EA, Martone ME, Jones YZ, Ellisman MH. Protoplasmic astrocytes in CA1 stratum radiatum occupy separate anatomical domains. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 22: 183-92. PMID 11756501 DOI: 10.1523/Jneurosci.22-01-00183.2002  0.716
2001 Capani F, Ellisman MH, Martone ME. Filamentous actin is concentrated in specific subpopulations of neuronal and glial structures in rat central nervous system. Brain Research. 923: 1-11. PMID 11743966 DOI: 10.1016/S0006-8993(01)03189-4  0.568
2001 Perkins GA, Wang L, Huang LJ, Humphries K, Yao VJ, Martone M, Deerinck TJ, Barraclough DM, Violin JD, Smith D, Newton A, Scott JD, Taylor SS, Ellisman MH. PKA, PKC, and AKAP localization in and around the neuromuscular junction. Bmc Neuroscience. 2: 17. PMID 11716788 DOI: 10.1186/1471-2202-2-17  0.534
2001 Capani F, Deerinck TJ, Ellisman MH, Bushong E, Bobik M, Martone ME. Phalloidin-eosin followed by photo-oxidation: a novel method for localizing F-actin at the light and electron microscopic levels. The Journal of Histochemistry and Cytochemistry : Official Journal of the Histochemistry Society. 49: 1351-61. PMID 11668188 DOI: 10.1177/002215540104901103  0.71
2001 Capani F, Martone ME, Deerinck TJ, Ellisman MH. Selective localization of high concentrations of F-actin in subpopulations of dendritic spines in rat central nervous system: a three-dimensional electron microscopic study. The Journal of Comparative Neurology. 435: 156-70. PMID 11391638 DOI: 10.1002/Cne.1199  0.568
2001 Hand GM, Martone ME, Stelljes A, Ellisman MH, Sosinsky GE. Specific labeling of connexin43 in NRK cells using tyramide-based signal amplification and fluorescence photooxidation. Microscopy Research and Technique. 52: 331-43. PMID 11180624 DOI: 10.1002/1097-0029(20010201)52:3<331::Aid-Jemt1017>3.0.Co;2-H  0.574
2001 Bobik M, Capani F, Martone ME, Ellisman M. Novel Molecular Specializations of the Pinceau in Rat Cerebellum as Revealed by Correlated Confocal Microscopy and Electron Tomography Microscopy and Microanalysis. 7: 96-97. DOI: 10.1017/S1431927600026556  0.566
2001 Martone ME, Peltier S, Lamont S, Gupta A, Ludaescher B, Khetani S, Molina T, Ellisman MH. Increasing Access to Tomographic Resources: Web-based Telemicroscopy and Database Microscopy and Microanalysis. 7: 92-93. DOI: 10.1017/S1431927600026532  0.581
2001 Stelljes A, Bushong EA, Martone ME, Wiseman PW, Hood KL, Mayford M, Ellisman MH. Study of Distribution and Transport Events of the GluR1 AMPA Receptor: Combination of Genetically Modified Receptors and Multi-Resolution Microscopy Microscopy and Microanalysis. 7: 40-41. DOI: 10.1017/S1431927600026271  0.683
2000 Martone ME, Hu BR, Ellisman MH. Alterations of hippocampal postsynaptic densities following transient ischemia. Hippocampus. 10: 610-6. PMID 11075832 DOI: 10.1002/1098-1063(2000)10:5<610::Aid-Hipo12>3.0.Co;2-E  0.571
2000 Martone ME, Deerinck TJ, Yamada N, Bushong E, Ellisman MH. Correlated 3D Light and Electron Microscopy: Use of High Voltage Electron Microscopy and Electron Tomography for Imaging Large Biological Structures Journal of Histotechnology. 23: 261-270. DOI: 10.1179/His.2000.23.3.261  0.719
1999 Ellisman M, Martone M. Stephen j. young (1938-1999) Journal of Structural Biology. 125: 253. PMID 10222282 DOI: 10.1006/Jsbi.1999.4099  0.492
1999 Hu BR, Fux CM, Martone ME, Zivin JA, Ellisman MH. Persistent phosphorylation of cyclic AMP responsive element-binding protein and activating transcription factor-2 transcription factors following transient cerebral ischemia in rat brain. Neuroscience. 89: 437-52. PMID 10077326 DOI: 10.1016/S0306-4522(98)00352-2  0.532
1999 Martone ME, Jones YZ, Young SJ, Ellisman MH, Zivin JA, Hu BR. Modification of postsynaptic densities after transient cerebral ischemia: a quantitative and three-dimensional ultrastructural study. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 19: 1988-97. PMID 10066252 DOI: 10.1523/Jneurosci.19-06-01988.1999  0.56
1999 Martone ME, Edelmann VM, Ellisman MH, Nef P. Cellular and subcellular distribution of the calcium-binding protein NCS-1 in the central nervous system of the rat. Cell and Tissue Research. 295: 395-407. PMID 10022960 DOI: 10.1007/S004410051246  0.564
1999 Shoop RD, Martone ME, Yamada N, Ellisman MH, Berg DK. Neuronal acetylcholine receptors with alpha7 subunits are concentrated on somatic spines for synaptic signaling in embryonic chick ciliary ganglia. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 19: 692-704. PMID 9880590 DOI: 10.1523/Jneurosci.19-02-00692.1999  0.548
1999 Martone ME, Deerinck TJ, Young SJ, Ellisman MH. Three Dimensional Protein Localization Using High Voltage Electron Microscopy. Acta Histochemica Et Cytochemica. 32: 35-43. DOI: 10.1267/Ahc.32.35  0.573
1999 Bushong E, Martone ME, Foster C, Ellisman MH. Effectiveness Of Immunolabeling Gfap For Estimating Astrocytic Shape And Volume Microscopy and Microanalysis. 5: 1340-1341. DOI: 10.1017/S143192760002002X  0.676
1999 Shoop R, Martone M, Yamada N, Ellisman M, Berg D. Localization of Nicotinic Acetylcholine Receptors on Somatic Spines of Chick Ciliary Ganglion Neurons Microscopy and Microanalysis. 5: 1028-1029. DOI: 10.1017/S1431927600018468  0.531
1999 Capani F, Martone ME, Deerinck TJ, Ellisman MH. Localization of Actin Filaments in the Central Nervous System Using Phalloidin and Correlative Light and Electron Microscopy Microscopy and Microanalysis. 5: 498-499. DOI: 10.1017/S1431927600015816  0.543
1998 Martone ME, Pollock JA, Ellisman MH. Subcellular localization of mRNA in neuronal cells. Contributions of high-resolution in situ hybridization techniques. Molecular Neurobiology. 18: 227-46. PMID 10206470 DOI: 10.1007/Bf02741301  0.563
1998 Hu BR, Park M, Martone ME, Fischer WH, Ellisman MH, Zivin JA. Assembly of proteins to postsynaptic densities after transient cerebral ischemia. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 18: 625-33. PMID 9425004 DOI: 10.1523/Jneurosci.18-02-00625.1998  0.539
1998 Sosinsky G, Martone M, Handel G, Musil L, Ellisman M. Correlative Confocal and Electron Microscopy of the Connexin43 Gap Junction Protein in NRK Cells: Balancing Fixation Conditions, Cell Permeabilization, Antigen-Antibody Interaction and Cell Ultrastructure. Microscopy and Microanalysis. 4: 450-451. DOI: 10.1017/S1431927600022376  0.548
1997 Perkins GA, Renken CW, Song JY, Frey TG, Young SJ, Lamont S, Martone ME, Lindsey S, Ellisman MH. Electron tomography of large, multicomponent biological structures. Journal of Structural Biology. 120: 219-27. PMID 9441927 DOI: 10.1006/Jsbi.1997.3920  0.567
1997 Ouyang Y, Martone ME, Deerinck TJ, Airey JA, Sutko JL, Ellisman MH. Differential distribution and subcellular localization of ryanodine receptor isoforms in the chicken cerebellum during development. Brain Research. 775: 52-62. PMID 9439828 DOI: 10.1016/S0006-8993(97)00840-8  0.557
1997 Martone ME, Holash JA, Bayardo A, Pasquale EB, Ellisman MH. Immunolocalization of the receptor tyrosine kinase EphA4 in the adult rat central nervous system. Brain Research. 771: 238-50. PMID 9401744 DOI: 10.1016/S0006-8993(97)00792-0  0.562
1997 Sekirnjak C, Martone ME, Weiser M, Deerinck T, Bueno E, Rudy B, Ellisman M. Subcellular localization of the K+ channel subunit Kv3.1b in selected rat CNS neurons. Brain Research. 766: 173-87. PMID 9359601 DOI: 10.1016/S0006-8993(97)00527-1  0.563
1997 Perkins G, Renken C, Martone ME, Young SJ, Ellisman M, Frey T. Electron tomography of neuronal mitochondria: three-dimensional structure and organization of cristae and membrane contacts. Journal of Structural Biology. 119: 260-72. PMID 9245766 DOI: 10.1006/Jsbi.1997.3885  0.544
1997 Martone ME, Alba SA, Edelman VM, Airey JA, Ellisman MH. Distribution of inositol-1,4,5-trisphosphate and ryanodine receptors in rat neostriatum. Brain Research. 756: 9-21. PMID 9187309 DOI: 10.1016/S0006-8993(96)01430-8  0.547
1997 Ellisman MH, Young SJ, Fan GY, Perkins G, Lamont S, Martone ME. Highlights of Selected Microscopy Research Resource Activities at San Diego Microscopy and Microanalysis. 3: 275-276. DOI: 10.1017/S1431927600008266  0.573
1997 Martone ME, Edelman VM, Thor A, Young SJ, Lamont SP, Ross J, Ellisman MH. Three-Dimensional Analysis of Tranverse Tubules in Normal and Failing Heart: A Combined Confocal and High Voltage Electron Microscope Study Microscopy and Microanalysis. 3: 231-232. DOI: 10.1017/S1431927600008047  0.545
1996 Knowles RB, Sabry JH, Martone ME, Deerinck TJ, Ellisman MH, Bassell GJ, Kosik KS. Translocation of RNA granules in living neurons. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 16: 7812-20. PMID 8987809 DOI: 10.1523/Jneurosci.16-24-07812.1996  0.548
1996 Martone ME, Pollock JA, Jones YZ, Ellisman MH. Ultrastructural localization of dendritic messenger RNA in adult rat hippocampus. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 16: 7437-46. PMID 8922399 DOI: 10.1523/Jneurosci.16-23-07437.1996  0.565
1996 Schaad NC, De Castro E, Nef S, Hegi S, Hinrichsen R, Martone ME, Ellisman MH, Sikkink R, Rusnak F, Sygush J, Nef P. Direct modulation of calmodulin targets by the neuronal calcium sensor NCS-1. Proceedings of the National Academy of Sciences of the United States of America. 93: 9253-8. PMID 8799187 DOI: 10.1073/Pnas.93.17.9253  0.536
1995 Weiser M, Bueno E, Sekirnjak C, Martone ME, Baker H, Hillman D, Chen S, Thornhill W, Ellisman M, Rudy B. The potassium channel subunit KV3.1b is localized to somatic and axonal membranes of specific populations of CNS neurons. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 15: 4298-314. PMID 7790912 DOI: 10.1523/Jneurosci.15-06-04298.1995  0.559
1995 Luznik L, Martone ME, Kraus G, Zhang Y, Xu Y, Ellisman MH, Wong-Staal F. Localization of human immunodeficiency virus Rev in transfected and virus-infected cells. Aids Research and Human Retroviruses. 11: 795-804. PMID 7546906 DOI: 10.1089/Aid.1995.11.795  0.539
1995 Weiser M, Bueno E, Sekirnjak C, Martone M, Baker H, Hillman D, Chen S, Thornhill W, Ellisman M, Rudy B. The potassium channel subunit KV3.1b is localized to somatic and axonal membranes of specific populations of CNS neurons The Journal of Neuroscience. 15: 4298-4314. DOI: 10.1523/JNEUROSCI.15-06-04298.1995  0.485
1994 Soto GE, Young SJ, Martone ME, Deerinck TJ, Lamont S, Carragher BO, Hama K, Ellisman MH. Serial section electron tomography: a method for three-dimensional reconstruction of large structures. Neuroimage. 1: 230-43. PMID 9343574 DOI: 10.1006/Nimg.1994.1008  0.565
1994 Martone ME, Young SJ, Armstrong DM, Groves PM. The distribution of cholinergic perikarya with respect to enkephalin-rich patches in the caudate nucleus of the adult cat. Journal of Chemical Neuroanatomy. 8: 47-59. PMID 7893420 DOI: 10.1016/0891-0618(94)90035-3  0.678
1994 Deerinck TJ, Martone ME, Lev-Ram V, Green DP, Tsien RY, Spector DL, Huang S, Ellisman MH. Fluorescence photooxidation with eosin: a method for high resolution immunolocalization and in situ hybridization detection for light and electron microscopy. The Journal of Cell Biology. 126: 901-10. PMID 7519623 DOI: 10.1083/Jcb.126.4.901  0.555
1993 Martone ME, Zhang Y, Simpliciano VM, Carragher BO, Ellisman MH. Three-dimensional visualization of the smooth endoplasmic reticulum in Purkinje cell dendrites. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 13: 4636-46. PMID 8229189 DOI: 10.1523/Jneurosci.13-11-04636.1993  0.568
1993 Martone ME, Armstrong DM, Young SJ, Groves PM. Cholinergic neurons are distributed preferentially in areas rich in substance P-like immunoreactivity in the caudate nucleus of the adult cat. Neuroscience. 56: 567-79. PMID 7504794 DOI: 10.1016/0306-4522(93)90357-L  0.666
1992 Hessler D, Young SJ, Carragher BO, Martone ME, Lamont S, Whittaker M, Milligan RA, Masliah E, Hinshaw JE, Ellisman MH. Programs for visualization in three-dimensional microscopy. Neuroimage. 1: 55-67. PMID 9343557 DOI: 10.1016/1053-8119(92)90007-A  0.574
1992 Martone ME, Armstrong DM, Young SJ, Groves PM. Ultrastructural examination of enkephalin and substance P input to cholinergic neurons within the rat neostriatum. Brain Research. 594: 253-62. PMID 1280527 DOI: 10.1016/0006-8993(92)91132-X  0.677
1991 Sawyer SF, Martone ME, Groves PM. A GABA immunocytochemical study of rat motor thalamus: light and electron microscopic observations. Neuroscience. 42: 103-24. PMID 1713652 DOI: 10.1016/0306-4522(91)90152-E  0.68
1990 Ryan LJ, Linder JC, Martone ME, Groves PM. Histological and ultrastructural evidence that D-amphetamine causes degeneration in neostriatum and frontal cortex of rats. Brain Research. 518: 67-77. PMID 1975218 DOI: 10.1016/0006-8993(90)90955-B  0.765
1988 Ryan LJ, Martone ME, Linder JC, Groves PM. Cocaine, in contrast to D-amphetamine, does not cause axonal terminal degeneration in neostriatum and agranular frontal cortex of Long-Evans rats. Life Sciences. 43: 1403-9. PMID 3185100 DOI: 10.1016/0024-3205(88)90307-4  0.752
1988 Ryan LJ, Martone ME, Linder JC, Groves PM. Continuous amphetamine administration induces tyrosine hydroxylase immunoreactive patches in the adult rat neostriatum. Brain Research Bulletin. 21: 133-7. PMID 2905931 DOI: 10.1016/0361-9230(88)90129-3  0.754
1988 Groves PM, Martone M, Young SJ, Armstrong DM. Three-dimensional pattern of enkephalin-like immunoreactivity in the caudate nucleus of the cat The Journal of Neuroscience. 8: 892-900. DOI: 10.1523/Jneurosci.08-03-00892.1988  0.68
1987 Beatty WW, Salmon DP, Bernstein N, Martone M, Lyon L, Butters N. Procedural learning in a patient with amnesia due to hypoxia. Brain and Cognition. 6: 386-402. PMID 3117075 DOI: 10.1016/0278-2626(87)90135-7  0.481
1986 Martone M, Butters N, Trauner D. Some analyses of forgetting of pictorial material in amnesic and demented patients. Journal of Clinical and Experimental Neuropsychology. 8: 161-78. PMID 2941450 DOI: 10.1080/01688638608401309  0.486
1986 Butters N, Wolfe J, Granholm E, Martone M. An assessment of verbal recall, recognition and fluency abilities in patients with Huntington's disease. Cortex; a Journal Devoted to the Study of the Nervous System and Behavior. 22: 11-32. PMID 2940074 DOI: 10.1016/S0010-9452(86)80030-2  0.48
1985 Butters N, Wolfe J, Martone M, Granholm E, Cermak LS. Memory disorders associated with Huntington's disease: verbal recall, verbal recognition and procedural memory. Neuropsychologia. 23: 729-43. PMID 2934642 DOI: 10.1016/0028-3932(85)90080-6  0.495
1984 Martone M, Butters N, Payne M, Becker JT, Sax DS. Dissociations between skill learning and verbal recognition in amnesia and dementia. Archives of Neurology. 41: 965-70. PMID 6236779 DOI: 10.1001/Archneur.1984.04050200071020  0.579
Low-probability matches (unlikely to be authored by this person)
2014 Chaudhri VK, Elenius D, Goldenkranz A, Gong A, Martone ME, Webb W, Yorke-Smith N. Comparative analysis of knowledge representation and reasoning requirements across a range of life sciences textbooks. Journal of Biomedical Semantics. 5: 51. PMID 25785183 DOI: 10.1186/2041-1480-5-51  0.297
2016 Kramer B, Bosman J, Ignac M, Kral C, Kalleinen T, Koskinen P, Bruno I, Buckland A, Callaghan S, Champieux R, Chapman C, Hagstrom S, Martone M, Murphy F, O'Donnell DP. Defining the Scholarly Commons - Reimagining Research Communication. Report of Force11 SCWG Workshop, Madrid, Spain, February 25-27, 2016 Research Ideas and Outcomes. 2. DOI: 10.3897/Rio.2.E9340  0.295
2013 Cone AC, Ambrosi C, Scemes E, Martone ME, Sosinsky GE. A comparative antibody analysis of pannexin1 expression in four rat brain regions reveals varying subcellular localizations. Frontiers in Pharmacology. 4: 6. PMID 23390418 DOI: 10.3389/Fphar.2013.00006  0.292
2012 Eliceiri KW, Berthold MR, Goldberg IG, Ibáñez L, Manjunath BS, Martone ME, Murphy RF, Peng H, Plant AL, Roysam B, Stuurman N, Stuurmann N, Swedlow JR, Tomancak P, Carpenter AE. Biological imaging software tools. Nature Methods. 9: 697-710. PMID 22743775 DOI: 10.1038/Nmeth.2084  0.291
2014 Kenneally C, Ivins O, Martone M, Mueller B, Trippe W. Re-envisioning the business of information: Policies, practices and procedures Information Services and Use. 34: 75-84. DOI: 10.3233/Isu-140729  0.291
2010 Kola J(, Harris J, Lawrie S, Rector A, Goble C, Martone M. Towards an ontology for psychosis Cognitive Systems Research. 11: 42-52. DOI: 10.1016/J.Cogsys.2008.08.005  0.29
2003 Sosinsky GE, Martone ME. Imaging of Big and Messy Biological Structures Using Electron Tomography Microscopy Today. 11: 8-15. DOI: 10.1017/S1551929500053001  0.283
2001 Sosinsky G, Hand G, Gaietta G, Deerinck T, Martone M, Adams S, Stelljes A, Jordan K, Laird DW, Tsien R, Ellisman M. Three-Dimensional Cellular Organization of Gap Junction Connexins Revealed by Specific Labeling and Electron Tomography Microscopy and Microanalysis. 7: 80-81. DOI: 10.1017/S1431927600026477  0.28
1999 Martone ME. Bridging the Resolution Gap: Correlated 3D Light and Electron Microscopic Analysis of Large Biological Structures Microscopy and Microanalysis. 5: 526-527. DOI: 10.1017/S1431927600015956  0.269
2014 Tasel SF, Hassanpour R, Mumcuoglu EU, Perkins GC, Martone M. Automatic detection of mitochondria from electron microscope tomography images: A curve fitting approach Progress in Biomedical Optics and Imaging - Proceedings of Spie. 9034. DOI: 10.1117/12.2043517  0.266
2012 Mumcuoglu EU, Hassanpour R, Tasel SF, Perkins G, Martone ME, Gurcan MN. Computerized detection and segmentation of mitochondria on electron microscope images. Journal of Microscopy. 246: 248-65. PMID 22506967 DOI: 10.1111/J.1365-2818.2012.03614.X  0.263
2015 Martone ME. FORCE11: Building the Future for Research Communications and e-Scholarship Bioscience. 65: 635. DOI: 10.1093/Biosci/Biv095  0.262
2012 Eliceiri KW, Berthold MR, Goldberg IG, Ibáñez L, Manjunath BS, Martone ME, Murphy RF, Peng H, Plant AL, Roysam B, Stuurmann N, Swedlow JR, Tomancak P, Carpenter AE. Erratum: Corrigendum: Biological imaging software tools Nature Methods. 9: 1031-1031. DOI: 10.1038/Nmeth1012-1031A  0.258
2012 Eliceiri KW, Berthold MR, Goldberg IG, Ibáñez L, Manjunath BS, Martone ME, Murphy RF, Peng H, Plant AL, Roysam B, Stuurmann N, Swedlow JR, Tomancak P, Carpenter AE. Erratum: Corrigendum: Biological imaging software tools Nature Methods. 9: 1031-1031. DOI: 10.1038/Nmeth1012-1031B  0.256
2005 Lugli G, Larson J, Martone ME, Jones Y, Smalheiser NR. Dicer and eIF2c are enriched at postsynaptic densities in adult mouse brain and are modified by neuronal activity in a calpain-dependent manner. Journal of Neurochemistry. 94: 896-905. PMID 16092937 DOI: 10.1111/J.1471-4159.2005.03224.X  0.256
2000 Hu BR, Martone ME, Jones YZ, Liu CL. Protein aggregation after transient cerebral ischemia. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 20: 3191-9. PMID 10777783 DOI: 10.1523/Jneurosci.20-09-03191.2000  0.256
2014 Martone ME. Brain and Behavior: we want you to share your data. Brain and Behavior. 4: 1-3. PMID 24653948 DOI: 10.1002/Brb3.192  0.255
2024 Martone ME. The past, present and future of neuroscience data sharing: a perspective on the state of practices and infrastructure for FAIR. Frontiers in Neuroinformatics. 17: 1276407. PMID 38250019 DOI: 10.3389/fninf.2023.1276407  0.248
2019 Martone M, Das S, Goscinski W, Hellgren-Kotaleski J, Ho ETW, Kennedy D, Leergaard T, Wachtler T, Yamaguchi Y, Abrams M. Call for community review of PyNN — A simulator-independent language for building neuronal network models F1000research. 8. DOI: 10.7490/F1000Research.1116399.1  0.246
2019 Martone M, Gerkin R, Moucek R, Das S, Goscinski W, Hellgren-Kotaleski J, Ho ETW, Kennedy D, Leergaard T, Abrams M. Call for community review of Neurodata Without Borders: Neurophysiology (NWB:N) 2.0--a data standard forneurophysiology F1000research. 8. DOI: 10.7490/F1000Research.1117538.1  0.244
2020 Martone M, Gerkin R, Moucek R, Das S, Goscinski W, Hellgren-Kotaleski J, Kennedy D, Leergaard T, Boline J, Abrams M. NIX – Neuroscience information exchange format F1000research. 9. DOI: 10.7490/F1000Research.1117858.1  0.243
2004 Liu CL, Martone ME, Hu BR. Protein ubiquitination in postsynaptic densities after transient cerebral ischemia. Journal of Cerebral Blood Flow and Metabolism : Official Journal of the International Society of Cerebral Blood Flow and Metabolism. 24: 1219-25. PMID 15545915 DOI: 10.1097/01.Wcb.0000136706.77918.21  0.242
2011 Hawrylycz M, Baldock RA, Burger A, Hashikawa T, Johnson GA, Martone M, Ng L, Lau C, Larsen SD, Nissanov J, Puelles L, Ruffins S, Verbeek F, Zaslavsky I, Boline J. Correction: Digital Atlasing and Standardization in the Mouse Brain Plos Computational Biology. 7. DOI: 10.1371/Annotation/22C5808A-56Cf-46E5-Ba1B-456E838A5428  0.241
1998 Martone ME, Thor A, Young SJ, MHE. Correlated 3D Light and Electron Microscopy of Large, Complex Structures: Analysis of Transverse Tubules in Heart Failure Microscopy and Microanalysis. 4: 440-441. DOI: 10.1017/S1431927600022327  0.24
1999 Ouyang YB, Tan Y, Comb M, Liu CL, Martone ME, Siesjö BK, Hu BR. Survival- and death-promoting events after transient cerebral ischemia: phosphorylation of Akt, release of cytochrome C and Activation of caspase-like proteases. Journal of Cerebral Blood Flow and Metabolism : Official Journal of the International Society of Cerebral Blood Flow and Metabolism. 19: 1126-35. PMID 10532637 DOI: 10.1097/00004647-199910000-00009  0.24
2019 Martone M, Das S, Goscinski W, Hellgren-Kotaleski J, Ho ETW, Kennedy D, Leergaard T, Wachtler T, Yamaguchi Y, Abrams M. Call for community review of NeuroML — A Model Description Language for Computational Neuroscience F1000research. 8. DOI: 10.7490/F1000Research.1116398.1  0.238
2002 Miller S, Yasuda M, Coats JK, Jones Y, Martone ME, Mayford M. Disruption of dendritic translation of CaMKIIalpha impairs stabilization of synaptic plasticity and memory consolidation. Neuron. 36: 507-19. PMID 12408852 DOI: 10.1016/S0896-6273(02)00978-9  0.237
2018 Martone M. The importance of community feedback in the INCF standards and best practices endorsement process F1000research. 7. DOI: 10.7490/F1000Research.1116069.1  0.236
2009 Boline J, Burger A, Hashikawa T, Johnson AG, Martone M, Ng L, Nissanov J, Puelles L, Ruffins S, Verbeek F, Zaslavsky I, Hawrylycz M. Digital Atlasing and Standardization in the Rodent Brain Frontiers in Neuroinformatics. 3. DOI: 10.3389/Conf.Neuro.11.2009.08.069  0.236
2019 Martone M, Aghazarian M. The Scholarly Commons Serials Librarian. 76: 220-224. DOI: 10.1080/0361526X.2019.1587699  0.236
2021 Murphy F, Bar-Sinai M, Martone ME. A tool for assessing alignment of biomedical data repositories with open, FAIR, citation and trustworthy principles. Plos One. 16: e0253538. PMID 34242248 DOI: 10.1371/journal.pone.0253538  0.236
2011 Green T, Vera C, Sussman MA, Martone M, Sung LA. Mechanobiology of erythrocytes from adult mice homozygous for a targeted disruption of the e-tmod gene at exon 1 Cellular and Molecular Bioengineering. 4: 637-647. DOI: 10.1007/S12195-011-0203-X  0.234
2016 Martone ME. Complete Cells and a Complete Scientist: A Tribute to Dr. Gina Sosinsky Microscopy and Microanalysis. 22: 1100-1101. DOI: 10.1017/S1431927616006346  0.232
2001 Zhou Q, Chu PH, Huang C, Cheng CF, Martone ME, Knoll G, Shelton GD, Evans S, Chen J. Ablation of Cypher, a PDZ-LIM domain Z-line protein, causes a severe form of congenital myopathy. The Journal of Cell Biology. 155: 605-12. PMID 11696561 DOI: 10.1083/Jcb.200107092  0.22
2002 Ryoke T, Gu Y, Ikeda Y, Martone ME, Oh SS, Jeon ES, Knowlton KU, Ross J. Apoptosis and oncosis in the early progression of left ventricular dysfunction in the cardiomyopathic hamster. Basic Research in Cardiology. 97: 65-75. PMID 12004790 DOI: 10.1007/S395-002-8389-4  0.217
2019 Abrams M, Martone M, Goscinski W, Das S, Yamaguchi Y, Ho ETW, Leergaard T, Hellgren-Kotaleski J, Wachtler T, Kennedy D. INCF Standards and Best Practices Review Criteria version 2.0 F1000research. 8. DOI: 10.7490/F1000Research.1116386.1  0.217
1999 Zhou Q, Ruiz-Lozano P, Martone ME, Chen J. Cypher, a striated muscle-restricted PDZ and LIM domain-containing protein, binds to alpha-actinin-2 and protein kinase C. The Journal of Biological Chemistry. 274: 19807-13. PMID 10391924 DOI: 10.1074/Jbc.274.28.19807  0.217
2019 Martone M, Goscinski W, Das S, Yamaguchi Y, Ho ETW, Leergaard T, Hellgren-Kotaleski J, Wachtler T, Kennedy D, Abrams M. International Neuroinformatics Coordinating Facility Review Criteria for Endorsement of Standards and Best Practices v. 1.0 F1000research. 8. DOI: 10.7490/F1000Research.1116388.1  0.217
2000 Ikeda Y, Martone M, Gu Y, Hoshijima M, Thor A, Oh SS, Peterson KL, Ross J. Altered membrane proteins and permeability correlate with cardiac dysfunction in cardiomyopathic hamsters American Journal of Physiology - Heart and Circulatory Physiology. 278. PMID 10749734 DOI: 10.1152/Ajpheart.2000.278.4.H1362  0.21
1999 Minamisawa S, Hoshijima M, Chu G, Ward CA, Frank K, Gu Y, Martone ME, Wang Y, Ross J, Kranias EG, Giles WR, Chien KR. Chronic phospholamban-sarcoplasmic reticulum calcium ATPase interaction is the critical calcium cycling defect in dilated cardiomyopathy. Cell. 99: 313-22. PMID 10555147 DOI: 10.1016/S0092-8674(00)81662-1  0.207
2017 Chodacki J, Lemberger T, Lin J, Martone M, Mietchen D, Polka J, Sever R, Strasser C. Technical aspects of preprint services in the life sciences: a workshop report Research Ideas and Outcomes. 3: e11825. DOI: 10.3897/Rio.3.E11825  0.207
2021 Torres-Espín A, Almeida CA, Chou A, Huie JR, Chiu M, Vavrek R, Sacramento J, Orr MB, Gensel JC, Grethe JS, Martone ME, Fouad K, Ferguson AR. Promoting FAIR Data Through Community-driven Agile Design: the Open Data Commons for Spinal Cord Injury (odc-sci.org). Neuroinformatics. PMID 34347243 DOI: 10.1007/s12021-021-09533-8  0.206
1999 Badorff C, Lee GH, Lamphear BJ, Martone ME, Campbell KP, Rhoads RE, Knowlton KU. Enteroviral protease 2A cleaves dystrophin: evidence of cytoskeletal disruption in an acquired cardiomyopathy. Nature Medicine. 5: 320-6. PMID 10086389 DOI: 10.1038/6543  0.204
2005 Liu C, Martone M, Ge P, Zhang F, Chen S, Hu B. Translational complex aggregation after transient cerebral ischemia Journal of Cerebral Blood Flow and Metabolism. 25. DOI: 10.1038/Sj.Jcbfm.9591524.0061  0.202
2023 Kleven H, Gillespie TH, Zehl L, Dickscheid T, Bjaalie JG, Martone ME, Leergaard TB. AtOM, an ontology model to standardize use of brain atlases in tools, workflows, and data infrastructures. Scientific Data. 10: 486. PMID 37495585 DOI: 10.1038/s41597-023-02389-4  0.199
2022 Gillespie TH, Tripathy SJ, Sy MF, Martone ME, Hill SL. The Neuron Phenotype Ontology: A FAIR Approach to Proposing and Classifying Neuronal Types. Neuroinformatics. PMID 35267146 DOI: 10.1007/s12021-022-09566-7  0.187
2021 Eke DO, Bernard A, Bjaalie JG, Chavarriaga R, Hanakawa T, Hannan AJ, Hill SL, Martone ME, McMahon A, Ruebel O, Crook S, Thiels E, Pestilli F. International data governance for neuroscience. Neuron. PMID 34914921 DOI: 10.1016/j.neuron.2021.11.017  0.178
2008 Kumar VS, Rutt B, Kurc T, Catalyurek UV, Pan TC, Chow S, Lamont S, Martone M, Saltz JH. Large-scale biomedical image analysis in grid environments. Ieee Transactions On Information Technology in Biomedicine : a Publication of the Ieee Engineering in Medicine and Biology Society. 12: 154-61. PMID 18348945 DOI: 10.1109/TITB.2007.908466  0.177
2007 Gupta A, Larson SD, Condit C, Gupta S, Fong L, Chen L, Martone ME. Toward an ontological database for subcellular neuroanatomy Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 4802: 64-73.  0.172
2016 Murray-Rust P, Martone M, Molloy J, Arrow T, MacGillivray M, Kittel C, Kasberger S, Steel G, Oppenheim C, Ranganathan A, Tennant J, Udell J. ContentMine/Hypothes.is Proposal Research Ideas and Outcomes. 2: e8424. DOI: 10.3897/Rio.2.E8424  0.168
2007 Ure J, Procter R, Martone M, Porteous D, Lloyd S, Lawrie S, Job D, Baldock R, Philp A, Liewald D, Rakebrandt F, Blaikie A, McKay C, Anderson S, Ainsworth J, et al. Data integration in eHealth: a domain/disease specific roadmap. Studies in Health Technology and Informatics. 126: 144-53. PMID 17476057  0.157
2021 Barch DM, Norris SMP, Martone ME. Using Cloud-Based Resources for Neuroimaging Research: A Practical Approach. Nam Perspectives. 2021. PMID 34611606 DOI: 10.31478/202107B  0.155
2003 Zhang S, Price D, Qian X, Gupta A, Wong M, Ellisman MH, Martone ME. A Cell Centered Database (CCDB) for multi-scale microscopy data management Microscopy and Microanalysis. 9: 1502-1503.  0.154
2004 Zaslavsky I, He H, Tran J, Martone ME, Gupta A. Integrating brain data spatially: Spatial data infrastructure and atlas environment for online federation and analysis of brain images International Conference On Database and Expert Systems Applications - Dexa. 15: 389-393.  0.148
2003 Zhang S, Qian X, Gupta A, Martone ME. A practical approach for microscopy imaging data management (MIDM) in neuroscience Proceedings of the International Conference On Scientific and Statistical Database Management, Ssdbm. 2003: 237-240. DOI: 10.1109/SSDM.2003.1214986  0.143
2022 de Bono B, Gillespie T, Surles-Zeigler MC, Kokash N, Grethe JS, Martone M. Representing Normal and Abnormal Physiology as Routes of Flow in ApiNATOMY. Frontiers in Physiology. 13: 795303. PMID 35547570 DOI: 10.3389/fphys.2022.795303  0.14
2022 Martone ME. A decade of GigaScience: the importance of community organizations for open and FAIR efforts in neuroinformatics. Gigascience. 11. PMID 35701370 DOI: 10.1093/gigascience/giac060  0.136
2000 Martone ME, Deerinck TJ, Yamada N, Bushong E, Ellisman MH. Correlated 3D light and electron microscopy: Use of high voltage electron microscopy and electron tomography for imaging large biological structures Journal of Histotechnology. 23: 261-270.  0.13
2003 Martone ME, Zhang S, Peltier S, Lin AW, Lee D, Molina T, Gupta A, Ellisman MH. Informatics resources for electron tomography Microscopy and Microanalysis. 9: 1164-1165.  0.13
2007 Fong LL, Larson SD, Gupta A, Condit C, Bug WJ, Chen L, West R, Lamont S, Terada M, Martone ME. An ontology-driven knowledge environment for subcellular neuroanatomy Ceur Workshop Proceedings. 258.  0.122
2000 Ludäscher B, Gupta A, Martone ME. Model-based information integration in a neuroscience mediator system Proceedings of the 26th International Conference On Very Large Data Bases, Vldb'00. 639-642.  0.12
2010 Kim HS, Schulze JP, Cone AC, Sosinsky GE, Martone ME. Dimensionality Reduction on Multi-Dimensional Transfer Functions for Multi-Channel Volume Data Sets. Information Visualization. 9: 167-180. PMID 21841914 DOI: 10.1057/ivs.2010.6  0.12
2010 Kim HS, Schulze JP, Cone AC, Sosinsky GE, Martone ME. Multi-Channel Transfer Function with Dimensionality Reduction. Proceedings of Spie--the International Society For Optical Engineering. 7530: 75300A. PMID 20582228 DOI: 10.1117/12.839526  0.108
1999 Martone ME, Deerinck TJ, Young SJ, Ellisman MH. Three dimensional protein localization using high voltage electron microscopy Acta Histochemica Et Cytochemica. 32: 35-43.  0.103
2007 Bug W, Wong WW, Gustafson C, Johnson GA, Martone ME, Price DL, Rosen GD, Williams RW, Zaslavsky I, Nissanov J. Brain atlasing tool interoperation: NeuroTerrain-Smart Atlas synergistic visualization and analysis environment Proceedings of the 3rd International Ieee Embs Conference On Neural Engineering. 280-283. DOI: 10.1109/CNE.2007.369665  0.1
2002 Qian X, Ludäscher B, Martone ME, Gupta A. Navigating virtual information sources with Know-ME Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2287: 739-741.  0.098
2007 Larson SD, Martone ME. Rule-based reasoning with a ulti-scale neuroanatomical ontology Ceur Workshop Proceedings. 258.  0.077
2013 Sivagnanam S, Majumdar A, Yoshimoto K, Astakhov V, Bandrowski A, Martone M, Carnevale NT. Introducing the neuroscience gateway Ceur Workshop Proceedings. 993.  0.075
2004 Zaslavsky I, Martone M, Gupta A. Mapping the brain with GIS Geospatial Solutions. 14: 58.  0.073
2005 McCarren J, Heuser J, Roth R, Yamada N, Martone M, Brahamsha B. Inactivation of swmA results in the loss of an outer cell layer in a swimming synechococcus strain. Journal of Bacteriology. 187: 224-30. PMID 15601706 DOI: 10.1128/Jb.187.1.224-230.2005  0.071
2006 Kumar VS, Rutt B, Kurc T, Catalyurek U, Saltz J, Chow S, Lamont S, Martone M. Large image correction and warping in a cluster environment Proceedings of the 2006 Acm/Ieee Conference On Supercomputing, Sc'06. DOI: 10.1145/1188455.1188539  0.066
2001 Ludäscher B, Gupta A, Martone ME. Model-based mediation with domain maps Proceedings - International Conference On Data Engineering. 81-90.  0.066
2007 Ceyhan E, Fong L, Tasky TN, Hurdal MK, Beg MF, Martone ME, Ratnanather JT. Type-specific analysis of morphometry of dendrite spines of mice Ispa 2007 - Proceedings of the 5th International Symposium On Image and Signal Processing and Analysis. 7-12. DOI: 10.1109/ISPA.2007.4383655  0.055
2003 Gupta A, Ludäscher B, Martone ME. BIRN-M: A Semantic Mediator for Solving Real-World Neuroscience Problems Proceedings of the Acm Sigmod International Conference On Management of Data. 678.  0.045
2006 Lewis JP, Mostafavi I, Sosinsky G, Martone ME, West R. Shape priors by kernel density modeling of PCA residual structure Proceedings - International Conference On Image Processing, Icip. 4: IV333-IV336. DOI: 10.1109/ICIP.2007.4380022  0.045
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