Xin Yu - Publications

Affiliations: 
2014-2020 High Field Magnetic Resonance Max Planck Institute for Biological Cybernetics, Tübingen, Baden-Württemberg, Germany 
 2018- Radiology Mass General Hospital and Harvard Medical School 
Area:
Neuroimaging, fMRI, plasticity, Neurovascular Coupling,

37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Choi S, Zeng H, Chen Y, Sobczak F, Qian C, Yu X. Laminar-Specific Functional Connectivity Mapping with Multi-Slice Line-Scanning fMRI. Cerebral Cortex (New York, N.Y. : 1991). PMID 35107125 DOI: 10.1093/cercor/bhab497  0.321
2021 Pais-Roldán P, Mateo C, Pan WJ, Acland B, Kleinfeld D, Snyder LH, Yu X, Keilholz S. Contribution of animal models toward understanding resting state functional connectivity. Neuroimage. 245: 118630. PMID 34644593 DOI: 10.1016/j.neuroimage.2021.118630  0.58
2021 Chen X, Jiang Y, Choi S, Pohmann R, Scheffler K, Kleinfeld D, Yu X. Assessment of single-vessel cerebral blood velocity by phase contrast fMRI. Plos Biology. 19: e3000923. PMID 34499636 DOI: 10.1371/journal.pbio.3000923  0.737
2021 Mächler P, Broggini T, Mateo C, Thunemann M, Fomin-Thunemann N, Doran PR, Sencan I, Kilic K, Desjardins M, Uhlirova H, Yaseen MA, Boas DA, Linninger AA, Vergassola M, Yu X, et al. A Suite of Neurophotonic Tools to Underpin the Contribution of Internal Brain States in fMRI. Current Opinion in Biomedical Engineering. 18. PMID 33959688 DOI: 10.1016/j.cobme.2021.100273  0.732
2020 Choi S, Takahashi K, Jiang Y, Köhler S, Zeng H, Wang Q, Ma Y, Yu X. Real-Time fMRI Brain Mapping in Animals. Journal of Visualized Experiments : Jove. PMID 33044460 DOI: 10.3791/61463  0.584
2020 Sobczak F, He Y, Sejnowski TJ, Yu X. Predicting the fMRI Signal Fluctuation with Recurrent Neural Networks Trained on Vascular Network Dynamics. Cerebral Cortex (New York, N.Y. : 1991). PMID 32940658 DOI: 10.1093/Cercor/Bhaa260  0.621
2020 Drew PJ, Mateo C, Turner KL, Yu X, Kleinfeld D. Ultra-slow Oscillations in fMRI and Resting-State Connectivity: Neuronal and Vascular Contributions and Technical Confounds. Neuron. PMID 32791040 DOI: 10.1016/J.Neuron.2020.07.020  0.609
2020 Chen Y, Sobczak F, Pais-Roldán P, Schwarz C, Koretsky AP, Yu X. Mapping the Brain-Wide Network Effects by Optogenetic Activation of the Corpus Callosum. Cerebral Cortex (New York, N.Y. : 1991). PMID 32556241 DOI: 10.1093/Cercor/Bhaa164  0.681
2020 Ovsepian SV, Jiang Y, Sardella TCP, Malekzadeh-Najafabadi J, Burton NC, Yu X, Ntziachristos V. Visualizing cortical response to optogenetic stimulation and sensory inputs using multispectral handheld optoacoustic imaging. Photoacoustics. 17: 100153. PMID 32154103 DOI: 10.1016/J.Pacs.2019.100153  0.595
2020 Pais-Roldán P, Takahashi K, Sobczak F, Chen Y, Zhao X, Zeng H, Jiang Y, Yu X. Indexing brain state-dependent pupil dynamics with simultaneous fMRI and optical fiber calcium recording. Proceedings of the National Academy of Sciences of the United States of America. PMID 32139609 DOI: 10.1073/Pnas.1909937117  0.598
2019 Handwerker J, Pérez-Rodas M, Beyerlein M, Vincent F, Beck A, Freytag N, Yu X, Pohmann R, Anders J, Scheffler K. A CMOS NMR needle for probing brain physiology with high spatial and temporal resolution. Nature Methods. PMID 31768059 DOI: 10.1038/S41592-019-0640-3  0.552
2019 Chen X, Sobczak F, Chen Y, Jiang Y, Qian C, Lu Z, Ayata C, Logothetis NK, Yu X. Mapping optogenetically-driven single-vessel fMRI with concurrent neuronal calcium recordings in the rat hippocampus. Nature Communications. 10: 5239. PMID 31748553 DOI: 10.1038/s41467-019-12850-x  0.691
2019 He Y, Wang M, Yu X. High spatiotemporal vessel-specific hemodynamic mapping with multi-echo single-vessel fMRI. Journal of Cerebral Blood Flow and Metabolism : Official Journal of the International Society of Cerebral Blood Flow and Metabolism. 271678X19886240. PMID 31696765 DOI: 10.1177/0271678X19886240  0.55
2019 Chen Y, Pais-Roldan P, Chen X, Frosz MH, Yu X. MRI-guided robotic arm drives optogenetic fMRI with concurrent Ca recording. Nature Communications. 10: 2536. PMID 31182714 DOI: 10.1038/S41467-019-10450-3  0.38
2019 Pais-Roldán P, Edlow BL, Jiang Y, Stelzer J, Zou M, Yu X. Multimodal assessment of recovery from coma in a rat model of diffuse brainstem tegmentum injury. Neuroimage. PMID 30708105 DOI: 10.1016/J.Neuroimage.2019.01.060  0.593
2018 Pais-Roldán P, Biswal B, Scheffler K, Yu X. Identifying Respiration-Related Aliasing Artifacts in the Rodent Resting-State fMRI. Frontiers in Neuroscience. 12: 788. PMID 30455623 DOI: 10.3389/Fnins.2018.00788  0.654
2018 He Y, Wang M, Chen X, Pohmann R, Polimeni JR, Scheffler K, Rosen BR, Kleinfeld D, Yu X. Ultra-Slow Single-Vessel BOLD and CBV-Based fMRI Spatiotemporal Dynamics and Their Correlation with Neuronal Intracellular Calcium Signals. Neuron. PMID 29398359 DOI: 10.1016/J.Neuron.2018.01.025  0.751
2018 Wang M, He Y, Sejnowski TJ, Yu X. Brain-state dependent astrocytic Ca2+ signals are coupled to both positive and negative BOLD-fMRI signals. Proceedings of the National Academy of Sciences of the United States of America. PMID 29382752 DOI: 10.1073/Pnas.1711692115  0.595
2017 Chung S, Jeong JH, Ko S, Yu X, Kim YH, Isaac JTR, Koretsky AP. Peripheral Sensory Deprivation Restores Critical-Period-like Plasticity to Adult Somatosensory Thalamocortical Inputs. Cell Reports. 19: 2707-2717. PMID 28658619 DOI: 10.1016/J.Celrep.2017.06.018  0.541
2017 Kleinfeld D, He Y, Mateo C, Scheffler K, Rosen B, Yu X. Two-photon and fMRI measurements of activity dependent single vessel dynamics in mouse Brain. DOI: 10.1364/Brain.2017.Brs1B.4  0.715
2016 Pais-Roldán P, Singh AP, Schulz H, Yu X. High magnetic field induced otolith fusion in the zebrafish larvae. Scientific Reports. 6: 24151. PMID 27063288 DOI: 10.1038/Srep24151  0.301
2016 Yu X, He Y, Wang M, Merkle H, Dodd SJ, Silva AC, Koretsky AP. Sensory and optogenetically driven single-vessel fMRI. Nature Methods. PMID 26855362 DOI: 10.1038/Nmeth.3765  0.785
2015 Wang X, Wang J, He Y, Li H, Yuan H, Evans A, Yu X, He Y, Wang H. Apolipoprotein E ε4 Modulates Cognitive Profiles, Hippocampal Volume, and Resting-State Functional Connectivity in Alzheimer's Disease. Journal of Alzheimer's Disease : Jad. 45: 781-95. PMID 25624419 DOI: 10.3233/Jad-142556  0.392
2015 Wang J, Wang X, He Y, Yu X, Wang H, He Y. Apolipoprotein E ε4 modulates functional brain connectome in Alzheimer's disease. Human Brain Mapping. 36: 1828-46. PMID 25619771 DOI: 10.1002/Hbm.22740  0.4
2014 Qian C, Yu X, Pothayee N, Dodd S, Bouraoud N, Star R, Bennett K, Koretsky A. Live nephron imaging by MRI. American Journal of Physiology. Renal Physiology. 307: F1162-8. PMID 25186296 DOI: 10.1152/Ajprenal.00326.2014  0.565
2014 Yu X, Koretsky AP. Interhemispheric plasticity protects the deafferented somatosensory cortex from functional takeover after nerve injury. Brain Connectivity. 4: 709-17. PMID 25117691 DOI: 10.1089/Brain.2014.0259  0.631
2014 Yu X, Qian C, Chen DY, Dodd SJ, Koretsky AP. Deciphering laminar-specific neural inputs with line-scanning fMRI. Nature Methods. 11: 55-8. PMID 24240320 DOI: 10.1038/Nmeth.2730  0.621
2013 Qian C, Yu X, Chen DY, Dodd S, Bouraoud N, Pothayee N, Chen Y, Beeman S, Bennett K, Murphy-Boesch J, Koretsky A. Wireless amplified nuclear MR detector (WAND) for high-spatial-resolution MR imaging of internal organs: preclinical demonstration in a rodent model. Radiology. 268: 228-36. PMID 23392428 DOI: 10.1148/Radiol.13121352  0.554
2012 Yu X, Chung S, Chen DY, Wang S, Dodd SJ, Walters JR, Isaac JT, Koretsky AP. Thalamocortical inputs show post-critical-period plasticity. Neuron. 74: 731-42. PMID 22632730 DOI: 10.1016/J.Neuron.2012.04.024  0.692
2012 Yu X, Glen D, Wang S, Dodd S, Hirano Y, Saad Z, Reynolds R, Silva AC, Koretsky AP. Direct imaging of macrovascular and microvascular contributions to BOLD fMRI in layers IV-V of the rat whisker-barrel cortex. Neuroimage. 59: 1451-60. PMID 21851857 DOI: 10.1016/J.Neuroimage.2011.08.001  0.766
2011 Yu X, Nieman BJ, Sudarov A, Szulc KU, Abdollahian DJ, Bhatia N, Lalwani AK, Joyner AL, Turnbull DH. Morphological and functional midbrain phenotypes in Fibroblast Growth Factor 17 mutant mice detected by Mn-enhanced MRI. Neuroimage. 56: 1251-8. PMID 21356319 DOI: 10.1016/J.Neuroimage.2011.02.068  0.702
2010 Yu X, Wang S, Chen DY, Dodd S, Goloshevsky A, Koretsky AP. 3D mapping of somatotopic reorganization with small animal functional MRI. Neuroimage. 49: 1667-76. PMID 19770051 DOI: 10.1016/J.Neuroimage.2009.09.021  0.631
2008 Yu X, Zou J, Babb JS, Johnson G, Sanes DH, Turnbull DH. Statistical mapping of sound-evoked activity in the mouse auditory midbrain using Mn-enhanced MRI. Neuroimage. 39: 223-30. PMID 17919926 DOI: 10.1016/J.Neuroimage.2007.08.029  0.735
2007 Yu X, Sanes DH, Aristizabal O, Wadghiri YZ, Turnbull DH. Large-scale reorganization of the tonotopic map in mouse auditory midbrain revealed by MRI. Proceedings of the National Academy of Sciences of the United States of America. 104: 12193-8. PMID 17620614 DOI: 10.1073/Pnas.0700960104  0.713
2006 Deans AE, Wadghiri YZ, Bernas LM, Yu X, Rutt BK, Turnbull DH. Cellular MRI contrast via coexpression of transferrin receptor and ferritin. Magnetic Resonance in Medicine : Official Journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine. 56: 51-9. PMID 16724301 DOI: 10.1002/Mrm.20914  0.722
2005 Yu X, Wadghiri YZ, Sanes DH, Turnbull DH. In vivo auditory brain mapping in mice with Mn-enhanced MRI. Nature Neuroscience. 8: 961-8. PMID 15924136 DOI: 10.1038/Nn1477  0.727
2004 Wadghiri YZ, Blind JA, Duan X, Moreno C, Yu X, Joyner AL, Turnbull DH. Manganese-enhanced magnetic resonance imaging (MEMRI) of mouse brain development. Nmr in Biomedicine. 17: 613-9. PMID 15761950 DOI: 10.1002/Nbm.932  0.714
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