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Scott M. Knudsen, Ph.D. - Publications

Affiliations: 
2006 Biochemistry University of Texas at Austin, Austin, Texas, U.S.A. 
Area:
Biochemistry
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22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Katsikis G, Collis JF, Knudsen SM, Agache V, Sader JE, Manalis SR. Inertial and viscous flywheel sensing of nanoparticles. Nature Communications. 12: 5099. PMID 34429420 DOI: 10.1038/s41467-021-25266-3  0.536
2019 Stockslager MA, Olcum S, Knudsen SM, Kimmerling RJ, Cermak N, Payer KR, Agache V, Manalis SR. Rapid and high-precision sizing of single particles using parallel suspended microchannel resonator arrays and deconvolution. The Review of Scientific Instruments. 90: 085004. PMID 31472632 DOI: 10.1063/1.5100861  0.582
2019 Hamza B, Ng SR, Prakadan SM, Delgado FF, Chin CR, King EM, Yang LF, Davidson SM, DeGouveia KL, Cermak N, Navia AW, Winter PS, Drake RS, Tammela T, Li CM, ... ... Knudsen SM, et al. Optofluidic real-time cell sorter for longitudinal CTC studies in mouse models of cancer. Proceedings of the National Academy of Sciences of the United States of America. PMID 30674677 DOI: 10.1073/Pnas.1814102116  0.559
2016 Cermak N, Becker JW, Knudsen SM, Chisholm SW, Manalis SR, Polz MF. Direct single-cell biomass estimates for marine bacteria via Archimedes' principle. The Isme Journal. PMID 27922599 DOI: 10.1038/Ismej.2016.161  0.565
2016 Cermak N, Olcum S, Delgado FF, Wasserman SC, Payer KR, A Murakami M, Knudsen SM, Kimmerling RJ, Stevens MM, Kikuchi Y, Sandikci A, Ogawa M, Agache V, Baléras F, Weinstock DM, et al. High-throughput measurement of single-cell growth rates using serial microfluidic mass sensor arrays. Nature Biotechnology. PMID 27598230 DOI: 10.1038/Nbt.3666  0.572
2015 Knudsen SM, Cermak N, Feijó Delgado F, Setlow B, Setlow P, Manalis SR. Water and Small Molecule Permeation of Dormant Bacillus subtilis Spores. Journal of Bacteriology. PMID 26483518 DOI: 10.1128/Jb.00435-15  0.561
2013 Feijó Delgado F, Cermak N, Hecht VC, Son S, Li Y, Knudsen SM, Olcum S, Higgins JM, Chen J, Grover WH, Manalis SR. Intracellular water exchange for measuring the dry mass, water mass and changes in chemical composition of living cells. Plos One. 8: e67590. PMID 23844039 DOI: 10.1371/Journal.Pone.0067590  0.59
2012 Knudsen SM, von Muhlen MG, Manalis SR. Quantifying particle coatings using high-precision mass measurements. Analytical Chemistry. 84: 1240-2. PMID 22243334 DOI: 10.1021/Ac300034R  0.57
2010 von Muhlen MG, Brault ND, Knudsen SM, Jiang S, Manalis SR. Label-free biomarker sensing in undiluted serum with suspended microchannel resonators. Analytical Chemistry. 82: 1905-10. PMID 20148583 DOI: 10.1021/Ac9027356  0.603
2009 Knudsen SM, von Muhlen MG, Schauer DB, Manalis SR. Determination of bacterial antibiotic resistance based on osmotic shock response. Analytical Chemistry. 81: 7087-90. PMID 20337387 DOI: 10.1021/Ac900968R  0.553
2007 Burg TP, Godin M, Knudsen SM, Shen W, Carlson G, Foster JS, Babcock K, Manalis SR. Weighing of biomolecules, single cells and single nanoparticles in fluid. Nature. 446: 1066-9. PMID 17460669 DOI: 10.1038/Nature05741  0.604
2007 Chunara R, Godin M, Knudsen SM, Manalis SR. Mass-based readout for agglutination assays Applied Physics Letters. 91. DOI: 10.1063/1.2806197  0.572
2006 Knudsen SM, Lee J, Ellington AD, Savran CA. Ribozyme-mediated signal augmentation on a mass-sensitive biosensor. Journal of the American Chemical Society. 128: 15936-7. PMID 17165697 DOI: 10.1021/Ja064137M  0.527
2006 Garibotti AV, Knudsen SM, Ellington AD, Seeman NC. Functional DNAzymes organized into two-dimensional arrays. Nano Letters. 6: 1505-7. PMID 16834439 DOI: 10.1021/Nl0609955  0.448
2006 Knudsen SM, Ellington AD. Aptazymes: Allosteric Ribozymes and Deoxyribozymes as Biosensors The Aptamer Handbook: Functional Oligonucleotides and Their Applications. 290-310. DOI: 10.1002/3527608192.ch13  0.404
2005 Bayer TS, Booth LN, Knudsen SM, Ellington AD. Arginine-rich motifs present multiple interfaces for specific binding by RNA. Rna (New York, N.Y.). 11: 1848-57. PMID 16314457 DOI: 10.1261/Rna.2167605  0.47
2004 Savran CA, Knudsen SM, Ellington AD, Manalis SR. Micromechanical detection of proteins using aptamer-based receptor molecules. Analytical Chemistry. 76: 3194-8. PMID 15167801 DOI: 10.1021/Ac049859F  0.63
2004 Knudsen SM, Ellington AD. Ribozyme déjà vu. Nature Structural & Molecular Biology. 11: 301-3. PMID 15048102 DOI: 10.1038/Nsmb0404-301  0.434
2004 Robertson MP, Knudsen SM, Ellington AD. In vitro selection of ribozymes dependent on peptides for activity. Rna (New York, N.Y.). 10: 114-27. PMID 14681590 DOI: 10.1261/Rna.5900204  0.589
2003 Hesselberth JR, Robertson MP, Knudsen SM, Ellington AD. Simultaneous detection of diverse analytes with an aptazyme ligase array. Analytical Biochemistry. 312: 106-12. PMID 12531194 DOI: 10.1016/S0003-2697(02)00441-4  0.68
2002 Knudsen SM, Robertson MP, Ellington AD. In vitro selection using modified or unnatural nucleotides. Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. Unit 9.6. PMID 18428900 DOI: 10.1002/0471142700.Nc0906S07  0.565
2002 Thompson KM, Syrett HA, Knudsen SM, Ellington AD. Group I aptazymes as genetic regulatory switches. Bmc Biotechnology. 2: 21. PMID 12466025 DOI: 10.1186/1472-6750-2-21  0.441
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