Tomomi Shimogori - Related publications

Affiliations: 
RIKEN 
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Peng H, Xie P, Liu L, Kuang X, Wang Y, Qu L, Gong H, Jiang S, Li A, Ruan Z, Ding L, Yao Z, Chen C, Chen M, Daigle TL, et al. Morphological diversity of single neurons in molecularly defined cell types. Nature. 598: 174-181. PMID 34616072 DOI: 10.1038/s41586-021-03941-1   
2021 Freeman AK, Glendining KA, Jasoni CL. Developmental genes controlling neural circuit formation are expressed in the early postnatal hypothalamus and cellular lining of the third ventricle. Journal of Neuroendocrinology. e13020. PMID 34423876 DOI: 10.1111/jne.13020   
2021 Yoon G, Lim YH, Jo D, Ryu J, Song J, Kim YK. Obesity-linked circular RNA circTshz2-2 regulates the neuronal cell cycle and spatial memory in the brain. Molecular Psychiatry. PMID 34561612 DOI: 10.1038/s41380-021-01303-x   
2021 Fearnley S, Raja R, Cloutier JF. Spatiotemporal expression of IgLON family members in the developing mouse nervous system. Scientific Reports. 11: 19536. PMID 34599206 DOI: 10.1038/s41598-021-97768-5   
2021 Richard EM, Bakhtiari S, Marsh APL, Kaiyrzhanov R, Wagner M, Shetty S, Pagnozzi A, Nordlie SM, Guida BS, Cornejo P, Magee H, Liu J, Norton BY, Webster RI, Worgan L, et al. Bi-allelic variants in SPATA5L1 lead to intellectual disability, spastic-dystonic cerebral palsy, epilepsy, and hearing loss. American Journal of Human Genetics. 108: 2006-2016. PMID 34626583 DOI: 10.1016/j.ajhg.2021.08.003   
2021 Sun X, Li W, Gong X, Hu G, Ge J, Wu J, Gao X. Investigating the Regulation of Neural Differentiation and Injury in PC12 Cells Using Microstructure Topographic Cues. Biosensors. 11. PMID 34677355 DOI: 10.3390/bios11100399   
2021 Salazar K, Espinoza F, Cerda-Gallardo G, Ferrada L, Magdalena R, Ramírez E, Ulloa V, Saldivia N, Troncoso N, Oviedo MJ, Barahona MJ, Martínez F, Nualart F. SVCT2 Overexpression and Ascorbic Acid Uptake Increase Cortical Neuron Differentiation, Which Is Dependent on Vitamin C Recycling between Neurons and Astrocytes. Antioxidants (Basel, Switzerland). 10. PMID 34573045 DOI: 10.3390/antiox10091413   
2021 Hernández R, Jiménez-Luna C, Ortiz R, Setién F, López M, Perazzoli G, Esteller M, Berdasco M, Prados J, Melguizo C. Impact of the Epigenetically Regulated Hoxa-5 Gene in Neural Differentiation from Human Adipose-Derived Stem Cells. Biology. 10. PMID 34440035 DOI: 10.3390/biology10080802   
2021 Tasdemir-Yilmaz OE, Druckenbrod NR, Olukoya OO, Dong W, Yung AR, Bastille I, Pazyra-Murphy MF, Sitko AA, Hale EB, Vigneau S, Gimelbrant AA, Kharchenko PV, Goodrich LV, Segal RA. Diversity of developing peripheral glia revealed by single-cell RNA sequencing. Developmental Cell. PMID 34469751 DOI: 10.1016/j.devcel.2021.08.005   
2021 Hatayama K, Kim B, Chen X, Lim YP, Davidson JO, Bennet L, Gunn AJ, Stonestreet BS. Changes in Cellular Localization of Inter-Alpha Inhibitor Proteins after Cerebral Ischemia in the Near-Term Ovine Fetus. International Journal of Molecular Sciences. 22. PMID 34639091 DOI: 10.3390/ijms221910751   
2021 Finneran DJ, Njoku IP, Flores-Pazarin D, Ranabothu MR, Nash KR, Morgan D, Gordon MN. Toward Development of Neuron Specific Transduction After Systemic Delivery of Viral Vectors. Frontiers in Neurology. 12: 685802. PMID 34512509 DOI: 10.3389/fneur.2021.685802   
2021 Henningsen JB, Soylu-Kucharz R, Björkqvist M, Petersén Å. Effects of excitotoxicity in the hypothalamus in transgenic mouse models of Huntington disease. Heliyon. 7: e07808. PMID 34458633 DOI: 10.1016/j.heliyon.2021.e07808   
2021 Komuro Y, Galas L, Morozov YM, Fahrion JK, Raoult E, Lebon A, Tilot AK, Kikuchi S, Ohno N, Vaudry D, Rakic P, Komuro H. The Role of Galanin in Cerebellar Granule Cell Migration in the Early Postnatal Mouse during Normal Development and After Injury. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 34462307 DOI: 10.1523/JNEUROSCI.0900-15.2021   
2021 Fajner V, Giavazzi F, Sala S, Oldani A, Martini E, Napoletano F, Parazzoli D, Cesare G, Cerbino R, Maspero E, Vaccari T, Polo S. Hecw controls oogenesis and neuronal homeostasis by promoting the liquid state of ribonucleoprotein particles. Nature Communications. 12: 5488. PMID 34531401 DOI: 10.1038/s41467-021-25809-8   
2021 An J, Chen B, Tian D, Guo Y, Yan Y, Yang H. Regulation of Neurogenesis and Neuronal Differentiation by Natural Compounds. Current Stem Cell Research & Therapy. PMID 34493197 DOI: 10.2174/1574888X16666210907141447   
2021 Wang LL, Serrano C, Zhong X, Ma S, Zou Y, Zhang CL. Revisiting astrocyte to neuron conversion with lineage tracing in vivo. Cell. PMID 34582787 DOI: 10.1016/j.cell.2021.09.005   
2021 Bueichekú E, Gonzalez-de-Echavarri JM, Ortiz-Teran L, Montal V, d'Oleire Uquillas F, De Marcos L, Orwig W, Kim CM, Ortiz-Teran E, Basaia S, Diez I, Sepulcre J. Divergent connectomic organization delineates genetic evolutionary traits in the human brain. Scientific Reports. 11: 19692. PMID 34608211 DOI: 10.1038/s41598-021-99082-6   
2021 Yamasaki Y, Lim YM, Minami R, Tsuda L. A splicing variant of Charlatan, a Drosophila REST-like molecule, preferentially localizes to axons. Biochemical and Biophysical Research Communications. 578: 35-41. PMID 34536827 DOI: 10.1016/j.bbrc.2021.09.002   
2021 Sarkar D, Shariq M, Dwivedi D, Krishnan N, Naumann R, Bhalla US, Ghosh HS. Adult brain neurons require continual expression of the schizophrenia-risk gene Tcf4 for structural and functional integrity. Translational Psychiatry. 11: 494. PMID 34564703 DOI: 10.1038/s41398-021-01618-x   
2021 Farhy-Tselnicker I, Boisvert MM, Liu H, Dowling C, Erikson GA, Blanco-Suarez E, Farhy C, Shokhirev MN, Ecker JR, Allen NJ. Activity-dependent modulation of synapse-regulating genes in astrocytes. Elife. 10. PMID 34494546 DOI: 10.7554/eLife.70514   
2021 Zhang X, Fu Y, Ding Z, Zhu N, Zhao M, Song Y, Huang X, Chen S, Yang Y, Zhang C, Hu Q, Ni Y, Ding L. Functional Heterogeneity of Reelin in the Oral Squamous Cell Carcinoma Microenvironment. Frontiers in Oncology. 11: 692390. PMID 34485127 DOI: 10.3389/fonc.2021.692390   
2021 Sokhadze G, Campbell PW, Charalambakis N, Govindaiah G, Guido W, McGee AW. Cre driver mouse lines for thalamocortical circuit mapping. The Journal of Comparative Neurology. PMID 34545582 DOI: 10.1002/cne.25248   
2021 Miressi F, Benslimane N, Favreau F, Rassat M, Richard L, Bourthoumieu S, Laroche C, Magy L, Magdelaine C, Sturtz F, Lia AS, Faye PA. GDAP1 Involvement in Mitochondrial Function and Oxidative Stress, Investigated in a Charcot-Marie-Tooth Model of hiPSCs-Derived Motor Neurons. Biomedicines. 9. PMID 34440148 DOI: 10.3390/biomedicines9080945   
2021 Cunningham JG, Scripter JD, Nti SA, Tucker ES. Early construction of the thalamocortical axon pathway requires c-Jun N-terminal kinase signaling within the ventral forebrain. Developmental Dynamics : An Official Publication of the American Association of Anatomists. PMID 34494344 DOI: 10.1002/dvdy.416   
2021 Sampieri L, Funes Chabán M, Di Giusto P, Rozés-Salvador V, Alvarez C. CREB3L2 Modulates Nerve Growth Factor-Induced Cell Differentiation. Frontiers in Molecular Neuroscience. 14: 650338. PMID 34421533 DOI: 10.3389/fnmol.2021.650338   
2021 Chorghay Z, MacFarquhar D, Li VJ, Aufmkolk S, Schohl A, Wiseman PW, Káradóttir RT, Ruthazer ES. Activity-dependent alteration of early myelin ensheathment in a developing sensory circuit. The Journal of Comparative Neurology. PMID 34599848 DOI: 10.1002/cne.25253   
2021 Irfan M, Evonuk KS, DeSilva TM. Microglia phagocytose oligodendrocyte progenitor cells and synapses during early postnatal development: implications for white versus gray matter maturation. The Febs Journal. PMID 34496137 DOI: 10.1111/febs.16190   
2021 Lange J, Wood-Kaczmar A, Ali A, Farag S, Ghosh R, Parker J, Casey C, Uno Y, Kunugi A, Ferretti P, Andre R, Tabrizi SJ. Mislocalization of Nucleocytoplasmic Transport Proteins in Human Huntington's Disease PSC-Derived Striatal Neurons. Frontiers in Cellular Neuroscience. 15: 742763. PMID 34658796 DOI: 10.3389/fncel.2021.742763   
2021 Li X, Pan Y, Gui J, Fang Z, Huang D, Luo H, Cheng L, Chen H, Song X, Jiang L. The Role and Mechanism of AMIGO3 in the Formation of Aberrant Neural Circuits After Status Convulsion in Immature Mice. Frontiers in Molecular Neuroscience. 14: 748115. PMID 34650403 DOI: 10.3389/fnmol.2021.748115   
2021 Agrawal M, Welshhans K. Local Translation Across Neural Development: A Focus on Radial Glial Cells, Axons, and Synaptogenesis. Frontiers in Molecular Neuroscience. 14: 717170. PMID 34434089 DOI: 10.3389/fnmol.2021.717170   
2021 Rosenberg HJ, Rao M. Enteric glia in homeostasis and disease: From fundamental biology to human pathology. Iscience. 24: 102863. PMID 34401661 DOI: 10.1016/j.isci.2021.102863   
2021 Peck LJ, Patel R, Diaz P, Wintle YM, Dickenson AH, Todd AJ, Calvo M, Bennett D. Studying independent knock-out mice reveals toxicity of exogenous LacZ to central nociceptor terminals and differential effects of Kv1.6 on acute and neuropathic pain sensation. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 34544832 DOI: 10.1523/JNEUROSCI.0187-21.2021   
2021 Follis RM, Tep C, Genaro-Mattos TC, Kim ML, Ryu JC, Morrison VE, Chan JR, Porter N, Carter BD, Yoon SO. Metabolic control of sensory neuron survival by the p75 neurotrophin receptor in Schwann cells. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 34507952 DOI: 10.1523/JNEUROSCI.3243-20.2021   
2021 Dziabis JE, Bilbo SD. Microglia and Sensitive Periods in Brain Development. Current Topics in Behavioral Neurosciences. PMID 34463934 DOI: 10.1007/7854_2021_242   
2021 Sun C, Rosenstock TR, Cohen MA, Sarkar S. Autophagy Dysfunction as a Phenotypic Readout in hiPSC-Derived Neuronal Cell Models of Neurodegenerative Diseases. Methods in Molecular Biology (Clifton, N.J.). PMID 34490597 DOI: 10.1007/7651_2021_420   
2021 Ponroy Bally B, Murai KK. Astrocytes in Down Syndrome Across the Lifespan. Frontiers in Cellular Neuroscience. 15: 702685. PMID 34483840 DOI: 10.3389/fncel.2021.702685   
2021 Osso LA, Rankin KA, Chan JR. Experience-dependent myelination following stress is mediated by the neuropeptide dynorphin. Neuron. PMID 34536353 DOI: 10.1016/j.neuron.2021.08.015   
2021 Yang H, Andersson U, Brines M. Neurons Are a Primary Driver of Inflammation via Release of HMGB1. Cells. 10. PMID 34685772 DOI: 10.3390/cells10102791   
2021 Lee TH, Liu PS, Wang SJ, Tsai MM, Shanmugam V, Hsieh HL. Bradykinin, as a Reprogramming Factor, Induces Transdifferentiation of Brain Astrocytes into Neuron-like Cells. Biomedicines. 9. PMID 34440126 DOI: 10.3390/biomedicines9080923   
2021 Cheng YC, Snavely A, Barrett LB, Zhang X, Herman C, Frost DJ, Riva P, Tochitsky I, Kawaguchi R, Singh B, Ivanis J, Huebner EA, Arvanites A, Oza V, Davidow L, et al. Topoisomerase I inhibition and peripheral nerve injury induce DNA breaks and ATF3-associated axon regeneration in sensory neurons. Cell Reports. 36: 109666. PMID 34496254 DOI: 10.1016/j.celrep.2021.109666   
2021 Cheng W, Ndoka E, Maung JN, Pan W, Rupp AC, Rhodes CJ, Olson DP, Myers MG. NTS Prlh overcomes orexigenic stimuli and ameliorates dietary and genetic forms of obesity. Nature Communications. 12: 5175. PMID 34462445 DOI: 10.1038/s41467-021-25525-3   
2021 Kao TJ, Wang CY, Hsu TI, Wu YH, Chuang JY, Huang CC, Hsieh CT. TDP-43 is Essential for Eph Receptor-Class-Specific Spinal Motor Axon Trajectory into the Limb. Neuroscience Research. PMID 34687812 DOI: 10.1016/j.neures.2021.10.006   
2021 Bassil R, Shields K, Granger K, Zein I, Ng S, Chih B. Improved modeling of human AD with an automated culturing platform for iPSC neurons, astrocytes and microglia. Nature Communications. 12: 5220. PMID 34471104 DOI: 10.1038/s41467-021-25344-6   
2021 Lee S, Lee W, Yang S, Suh YJ, Hong DG, Chang SC, Kim HS, Lee J. Di--butyl phthalate disrupts neuron maturation in primary rat embryo neurons and male C57BL/6 mice. Journal of Toxicology and Environmental Health. Part A. 1-15. PMID 34488563 DOI: 10.1080/15287394.2021.1973631   
2021 An J, He Y, Yin J, Ding Z, Han Q, Chen Y, Wang Q, Chai Z, Yu J, Song L, Xiao B, Ma C. Temporal and spatial evolution of various functional neurons during demyelination induced by cuprizone. Journal of Neurophysiology. PMID 34669500 DOI: 10.1152/jn.00224.2021   
2021 Banovac I, Sedmak D, Judaš M, Petanjek Z. Von Economo Neurons - Primate-Specific or Commonplace in the Mammalian Brain? Frontiers in Neural Circuits. 15: 714611. PMID 34539353 DOI: 10.3389/fncir.2021.714611   
2021 Luo K, Wang L, Shen Y, She S, Cui Y, Liu K. TET3-mediated accumulation of DNA hydroxymethylation contributes to the activity-dependent gene expression of Rab3a in post-mitotic neurons. Journal of Integrative Neuroscience. 20: 529-539. PMID 34645086 DOI: 10.31083/j.jin2003057   
2021 Schnatz A, Müller C, Brahmer A, Krämer-Albers EM. Extracellular Vesicles in neural cell interaction and CNS homeostasis. Faseb Bioadvances. 3: 577-592. PMID 34377954 DOI: 10.1096/fba.2021-00035   
2021 Zhu S, Stanslowsky N, Fernández-Trillo J, Mamo TM, Yu P, Kalmbach N, Ritter B, Eggenschwiler R, Ouwendijk WJD, Mzinza D, Tan L, Leffler A, Spohn M, Brown RJP, Kropp KA, et al. Generation of hiPSC-derived low threshold mechanoreceptors containing axonal termini resembling bulbous sensory nerve endings and expressing Piezo1 and Piezo2. Stem Cell Research. 56: 102535. PMID 34607262 DOI: 10.1016/j.scr.2021.102535   
2021 Dudink I, Hüppi PS, Sizonenko SV, Castillo-Melendez M, Sutherland AE, Allison BJ, Miller SL. Altered trajectory of neurodevelopment associated with fetal growth restriction. Experimental Neurology. 113885. PMID 34627856 DOI: 10.1016/j.expneurol.2021.113885