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Brett M. Tyler - Publications

Affiliations: 
1988-2002 University of California, Davis, Davis, CA 
 2002-2011 Virginia Polytechnic Institute and State University, Blacksburg, VA, United States 
 2012- Botany and Plant Pathology Oregon State University, Corvallis, OR 
Area:
Molecular Biology, Plant Pathology Agriculture, Biochemistry
Website:
https://bpp.oregonstate.edu/users/brett-tyler
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132 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Gu B, Shao G, Gao W, Miao J, Wang Q, Liu X, Tyler BM. Transcriptional Variability Associated With CRISPR-Mediated Gene Replacements at the Locus. Frontiers in Microbiology. 12: 645331. PMID 33815332 DOI: 10.3389/fmicb.2021.645331  0.392
2020 Tian B, Xie J, Fu Y, Cheng J, Li B, Chen T, Zhao Y, Gao Z, Yang P, Barbetti MJ, Tyler BM, Jiang D. A cosmopolitan fungal pathogen of dicots adopts an endophytic lifestyle on cereal crops and protects them from major fungal diseases. The Isme Journal. PMID 32814863 DOI: 10.1038/S41396-020-00744-6  0.325
2020 Adams TM, Armitage AD, Sobczyk MK, Bates HJ, Tabima JF, Kronmiller BA, Tyler BM, Grünwald NJ, Dunwell JM, Nellist CF, Harrison RJ. Genomic Investigation of the Strawberry Pathogen Indicates Pathogenicity Is Associated With Transcriptional Variation in Three Key Races. Frontiers in Microbiology. 11: 490. PMID 32351458 DOI: 10.3389/Fmicb.2020.00490  0.481
2020 Fang Y, Coelho MA, Shu H, Schotanus K, Thimmappa BC, Yadav V, Chen H, Malc EP, Wang J, Mieczkowski PA, Kronmiller B, Tyler BM, Sanyal K, Dong S, Nowrousian M, et al. Long transposon-rich centromeres in an oomycete reveal divergence of centromere features in Stramenopila-Alveolata-Rhizaria lineages. Plos Genetics. 16: e1008646. PMID 32150559 DOI: 10.1371/Journal.Pgen.1008646  0.344
2020 Kashyap A, Rhodes A, Kronmiller B, Berger J, Champagne A, Davis EW, Finnegan MV, Geniza M, Hendrix DA, Löhr CV, Petro VM, Sharpton TJ, Wells J, Epps CW, Jaiswal P, ... Tyler BM, et al. Pan-tissue transcriptome analysis of long noncoding RNAs in the American beaver Castor canadensis. Bmc Genomics. 21: 153. PMID 32050897 DOI: 10.1186/S12864-019-6432-4  0.334
2019 Zhang X, Liu B, Zou F, Shen D, Yin Z, Wang R, He F, Wang Y, Tyler BM, Fan W, Qian W, Dou D. Whole Genome Re-sequencing Reveals Natural Variation and Adaptive Evolution of . Frontiers in Microbiology. 10: 2792. PMID 31849921 DOI: 10.3389/Fmicb.2019.02792  0.465
2019 Wang L, Chen H, Li J, Shu H, Zhang X, Wang Y, Tyler BM, Dong S. Effector gene silencing mediated by histone methylation underpins host adaptation in an oomycete plant pathogen. Nucleic Acids Research. PMID 31819959 DOI: 10.1093/Nar/Gkz1160  0.456
2019 Wang W, Xue Z, Miao J, Cai M, Zhang C, Li T, Zhang B, Tyler BM, Liu X. , an Oxathiapiprolin-Resistance Gene, Functions as a Novel Selection Marker for Transformation and CRISPR/Cas9 Mediated Genome Editing. Frontiers in Microbiology. 10: 2402. PMID 31708886 DOI: 10.3389/Fmicb.2019.02402  0.405
2019 Qi T, Guo J, Liu P, He F, Wan C, Islam MA, Tyler BM, Kang Z, Guo J. Stripe Rust Effector PstGSRE1 Disrupts Nuclear Localization of ROS-Promoting Transcription Factor TaLOL2 to Defeat ROS-Induced Defense in Wheat. Molecular Plant. PMID 31606466 DOI: 10.1016/J.Molp.2019.09.010  0.371
2019 Li T, Wang Q, Feng R, Li L, Ding L, Fan G, Li W, Du Y, Zhang M, Huang G, Schäfer P, Meng Y, Tyler BM, Shan W. Negative regulators of plant immunity derived from cinnamyl alcohol dehydrogenases are targeted by multiple Phytophthora Avr3a-like effectors. The New Phytologist. PMID 31436314 DOI: 10.1111/Nph.16139  0.337
2019 Shen D, Tang Z, Wang C, Wang J, Dong Y, Chen Y, Wei Y, Cheng B, Zhang M, Grenville-Briggs LJ, Tyler BM, Dou D, Xia A. Infection mechanisms and putative effector repertoire of the mosquito pathogenic oomycete Pythium guiyangense uncovered by genomic analysis. Plos Genetics. 15: e1008116. PMID 31017897 DOI: 10.1371/Journal.Pgen.1008116  0.358
2019 Dale AL, Feau N, Everhart SE, Dhillon B, Wong B, Sheppard J, Bilodeau GJ, Brar A, Tabima JF, Shen D, Brasier CM, Tyler BM, Grünwald NJ, Hamelin RC. Mitotic Recombination and Rapid Genome Evolution in the Invasive Forest Pathogen . Mbio. 10. PMID 30862749 DOI: 10.1128/Mbio.02452-18  0.433
2019 Malar C M, Yuzon JD, Das S, Das A, Panda A, Ghosh S, Tyler BM, Kasuga T, Tripathy S. Haplotype-phased genome assembly of virulent Phythophthora ramorum isolate ND886 facilitated by long-read sequencing reveals effector polymorphisms and copy number variation. Molecular Plant-Microbe Interactions : Mpmi. PMID 30794480 DOI: 10.1094/Mpmi-08-18-0222-R  0.332
2018 Bollmann SR, Press CM, Tyler BM, Grünwald NJ. Expansion and Divergence of Argonaute Genes in the Oomycete Genus . Frontiers in Microbiology. 9: 2841. PMID 30555430 DOI: 10.3389/Fmicb.2018.02841  0.404
2018 Li H, Wang H, Jing M, Zhu J, Guo B, Wang Y, Lin Y, Chen H, Kong L, Ma Z, Wang Y, Ye W, Dong S, Tyler BM, Wang Y. A effector recruits a host cytoplasmic transacetylase into nuclear speckles to enhance plant susceptibility. Elife. 7. PMID 30346270 DOI: 10.7554/Elife.40039  0.323
2018 Wang Z, Tyler BM, Liu X. Protocol of Phytophthora capsici Transformation Using the CRISPR-Cas9 System. Methods in Molecular Biology (Clifton, N.J.). 1848: 265-274. PMID 30182240 DOI: 10.1007/978-1-4939-8724-5_17  0.453
2018 Miao J, Chi Y, Lin D, Tyler B, Liu XL. Mutations in ORP1 conferring oxathiapiprolin resistance confirmed by genome editing using CRISPR/Cas9 in Phytophthora capsici and P. sojae. Phytopathology. PMID 29979095 DOI: 10.1094/Phyto-01-18-0010-R  0.311
2018 Miao J, Li X, Lin D, Liu X, Tyler BM. Oxysterol-binding protein-related protein 2 is not essential for Phytophthora sojae based on CRISPR/Cas9 deletions. Environmental Microbiology Reports. PMID 29521469 DOI: 10.1111/1758-2229.12638  0.311
2018 Wang Y, Xu Y, Sun Y, Wang H, Qi J, Wan B, Ye W, Lin Y, Shao Y, Dong S, Tyler BM, Wang Y. Leucine-rich repeat receptor-like gene screen reveals that Nicotiana RXEG1 regulates glycoside hydrolase 12 MAMP detection. Nature Communications. 9: 594. PMID 29426870 DOI: 10.1038/S41467-018-03010-8  0.382
2017 Deb D, Anderson R, Kin THY, Tyler BM, McDowell JM. Conserved RxLR effectors from oomycetes Hyaloperonospora arabidopsidis and Phytophthora sojae suppress PAMP- and effector-triggered immunity in diverse plants. Molecular Plant-Microbe Interactions : Mpmi. PMID 29106332 DOI: 10.1094/Mpmi-07-17-0169-Fi  0.411
2017 Tabima J, Kronmiller B, Press C, Tyler BM, Zasada I, Grünwald NJ. Whole genome sequences of the raspberry and strawberry pathogens Phytophthora rubi and P. fragariae. Molecular Plant-Microbe Interactions : Mpmi. PMID 28682157 DOI: 10.1094/Mpmi-04-17-0081-A  0.351
2017 Fang Y, Jang HS, Watson GW, Wellappili DP, Tyler BM. Distinctive Nuclear Localization Signals in the Oomycete Phytophthora sojae. Frontiers in Microbiology. 8: 10. PMID 28210240 DOI: 10.3389/Fmicb.2017.00010  0.334
2017 Ali SS, Shao J, Lary DJ, Kronmiller B, Shen D, Strem MD, Amoako-Attah I, Akrofi AY, Begoude BA, Ten Hoopen GM, Coulibaly K, Kebe BI, Melnick RL, Guiltinan MJ, Tyler BM, et al. Phytophthora megakarya and P. palmivora, closely related causal agents of cacao black pod rot, underwent increases in genome sizes and gene numbers by different mechanisms. Genome Biology and Evolution. PMID 28186564 DOI: 10.1093/Gbe/Evx021  0.454
2017 Fang Y, Cui L, Gu B, Arredondo F, Tyler BM. Efficient Genome Editing in the Oomycete Phytophthora sojae Using CRISPR/Cas9. Current Protocols in Microbiology. 44: 21A.1.1-21A.1.26. PMID 28166383 DOI: 10.1002/Cpmc.25  0.366
2017 Ma Z, Zhu L, Song T, Wang Y, Zhang Q, Xia Y, Qiu M, Lin Y, Li H, Kong L, Fang Y, Ye W, Wang Y, Dong S, Zheng X, ... Tyler BM, et al. A paralogous decoy protects Phytophthora sojae apoplastic effector PsXEG1 from a host inhibitor. Science (New York, N.Y.). PMID 28082413 DOI: 10.1126/Science.Aai7919  0.336
2016 Panda A, Sen D, Ghosh A, Gupta A, C MM, Mishra GP, Singh D, Ye W, Tyler BM, Tripathy S. EuMicrobedbLite: A lightweight genomic resource and analytic platform for draft oomycete genomes. Molecular Plant Pathology. PMID 27785876 DOI: 10.1111/Mpp.12505  0.341
2016 Ye W, Wang Y, Tyler BM, Wang Y. Comparative Genomic Analysis among Four Representative Isolates of Phytophthora sojae Reveals Genes under Evolutionary Selection. Frontiers in Microbiology. 7: 1547. PMID 27746768 DOI: 10.3389/Fmicb.2016.01547  0.499
2016 Jing M, Guo B, Li H, Yang B, Wang H, Kong G, Zhao Y, Xu H, Wang Y, Ye W, Dong S, Qiao Y, Tyler BM, Ma W, Wang Y. A Phytophthora sojae effector suppresses endoplasmic reticulum stress-mediated immunity by stabilizing plant Binding immunoglobulin Proteins. Nature Communications. 7: 11685. PMID 27256489 DOI: 10.1038/Ncomms11685  0.318
2016 Ye W, Wang Y, Shen D, Li D, Pu T, Jiang Z, Zhang Z, Zheng X, Tyler BM, Wang Y. Sequencing of the litchi downy blight pathogen reveals it is a Phytophthora species with downy mildew-like characteristics. Molecular Plant-Microbe Interactions : Mpmi. PMID 27183038 DOI: 10.1094/Mpmi-03-16-0056-R  0.375
2016 Bollmann SR, Fang Y, Press CM, Tyler BM, Grünwald NJ. Diverse Evolutionary Trajectories for Small RNA Biogenesis Genes in the Oomycete Genus Phytophthora. Frontiers in Plant Science. 7: 284. PMID 27014308 DOI: 10.3389/Fpls.2016.00284  0.43
2015 Fang Y, Tyler BM. Efficient Disruption and Replacement of an Effector Gene in the Oomycete Phytophthora sojae using CRISPR/Cas9. Molecular Plant Pathology. PMID 26507366 DOI: 10.1111/Mpp.12318  0.466
2015 Helliwell EE, Vega-Arreguín J, Shi Z, Bailey B, Xiao S, Maximova SN, Tyler BM, Guiltinan MJ. Enhanced resistance in Theobroma cacao against oomycete and fungal pathogens by secretion of phosphatidylinositol-3-phosphate-binding proteins. Plant Biotechnology Journal. PMID 26214158 DOI: 10.1111/Pbi.12436  0.335
2015 Fister AS, O'Neil ST, Shi Z, Zhang Y, Tyler BM, Guiltinan MJ, Maximova SN. Two Theobroma cacao genotypes with contrasting pathogen tolerance show aberrant transcriptional and ROS responses after salicylic acid treatment. Journal of Experimental Botany. PMID 26163705 DOI: 10.1093/Jxb/Erv334  0.392
2015 Ma Z, Song T, Zhu L, Ye W, Wang Y, Shao Y, Dong S, Zhang Z, Dou D, Zheng X, Tyler BM, Wang Y. A Phytophthora sojae Glycoside Hydrolase 12 Protein Is a Major Virulence Factor during Soybean Infection and Is Recognized as a PAMP. The Plant Cell. PMID 26163574 DOI: 10.1105/Tpc.15.00390  0.329
2015 Zhu C, Yang X, Lv R, Li Z, Ding X, Tyler BM, Zhang X. Phytophthora capsici homolog of the cell cycle regulator SDA1 is required for sporangial morphology, mycelial growth and plant infection. Molecular Plant Pathology. PMID 26095317 DOI: 10.1111/Mpp.12285  0.335
2015 Blondeau K, Blaise F, Graille M, Kale SD, Linglin J, Ollivier B, Labarde A, Lazar N, Daverdin G, Balesdent MH, Choi DH, Tyler BM, Rouxel T, van Tilbeurgh H, Fudal I. Crystal structure of the effector AvrLm4-7 of Leptosphaeria maculans reveals insights into its translocation into plant cell and recognition by resistance proteins. The Plant Journal : For Cell and Molecular Biology. PMID 26082394 DOI: 10.1111/Tpj.12913  0.377
2015 Fu L, Zhu C, Ding X, Yang X, Morris PF, Tyler BM, Zhang X. Characterization of Cell-Death-Inducing Members of the Pectate Lyase Gene Family in Phytophthora capsici and Their Contributions to Infection of Pepper. Molecular Plant-Microbe Interactions : Mpmi. MPMI11140352R. PMID 25775270 DOI: 10.1094/Mpmi-11-14-0352-R  0.484
2014 Purwantini E, Torto-Alalibo T, Lomax J, Setubal JC, Tyler BM, Mukhopadhyay B. Genetic resources for methane production from biomass described with the Gene Ontology. Frontiers in Microbiology. 5: 634. PMID 25520705 DOI: 10.3389/Fmicb.2014.00634  0.325
2014 Torto-Alalibo T, Purwantini E, Lomax J, Setubal JC, Mukhopadhyay B, Tyler BM. Genetic resources for advanced biofuel production described with the Gene Ontology. Frontiers in Microbiology. 5: 528. PMID 25346727 DOI: 10.3389/Fmicb.2014.00528  0.376
2013 Ye W, Wang Y, Dong S, Tyler BM, Wang Y. Phylogenetic and transcriptional analysis of an expanded bZIP transcription factor family in Phytophthora sojae. Bmc Genomics. 14: 839. PMID 24286285 DOI: 10.1186/1471-2164-14-839  0.471
2013 Jiang RH, de Bruijn I, Haas BJ, Belmonte R, Löbach L, Christie J, van den Ackerveken G, Bottin A, Bulone V, Díaz-Moreno SM, Dumas B, Fan L, Gaulin E, Govers F, Grenville-Briggs LJ, ... ... Tyler BM, et al. Distinctive expansion of potential virulence genes in the genome of the oomycete fish pathogen Saprolegnia parasitica. Plos Genetics. 9: e1003272. PMID 23785293 DOI: 10.1371/Journal.Pgen.1003272  0.444
2013 Tyler BM, Kale SD, Wang Q, Tao K, Clark HR, Drews K, Antignani V, Rumore A, Hayes T, Plett JM, Fudal I, Gu B, Chen Q, Affeldt KJ, Berthier E, et al. Microbe-independent entry of oomycete RxLR effectors and fungal RxLR-like effectors into plant and animal cells is specific and reproducible. Molecular Plant-Microbe Interactions : Mpmi. 26: 611-6. PMID 23550528 DOI: 10.1094/Mpmi-02-13-0051-Ia  0.319
2013 Song T, Kale SD, Arredondo FD, Shen D, Su L, Liu L, Wu Y, Wang Y, Dou D, Tyler BM. Two RxLR avirulence genes in Phytophthora sojae determine soybean Rps1k-mediated disease resistance. Molecular Plant-Microbe Interactions : Mpmi. 26: 711-20. PMID 23530601 DOI: 10.1094/Mpmi-12-12-0289-R  0.466
2013 Sun F, Kale SD, Azurmendi HF, Li D, Tyler BM, Capelluto DG. Structural basis for interactions of the Phytophthora sojae RxLR effector Avh5 with phosphatidylinositol 3-phosphate and for host cell entry. Molecular Plant-Microbe Interactions : Mpmi. 26: 330-44. PMID 23075041 DOI: 10.1094/Mpmi-07-12-0184-R  0.346
2013 Wilson ML, Cai Y, Hanlon R, Taylor S, Chevreux B, Setubal JC, Tyler BM, Peccoud J. Sequence verification of synthetic DNA by assembly of sequencing reads. Nucleic Acids Research. 41: e25. PMID 23042248 DOI: 10.1093/Nar/Gks908  0.354
2012 Jiang RH, Tyler BM. Mechanisms and evolution of virulence in oomycetes. Annual Review of Phytopathology. 50: 295-318. PMID 22920560 DOI: 10.1146/Annurev-Phyto-081211-172912  0.454
2012 Anderson RG, Casady MS, Fee RA, Vaughan MM, Deb D, Fedkenheuer K, Huffaker A, Schmelz EA, Tyler BM, McDowell JM. Homologous RXLR effectors from Hyaloperonospora arabidopsidis and Phytophthora sojae suppress immunity in distantly related plants. The Plant Journal : For Cell and Molecular Biology. 72: 882-93. PMID 22709376 DOI: 10.1111/J.1365-313X.2012.05079.X  0.445
2012 Sun F, Azurmendi HF, Kale SD, Li D, Xiao S, Tyler BM, Capelluto DG. Insight into the Structural Basis and Intermolecular Interactions of the Phytophthora Sojae Avirulence Homolog-5 with Phosphatidylinositol-3-Phosphate Biophysical Journal. 102: 301a. DOI: 10.1016/J.Bpj.2011.11.1666  0.34
2011 Dong S, Yin W, Kong G, Yang X, Qutob D, Chen Q, Kale SD, Sui Y, Zhang Z, Dou D, Zheng X, Gijzen M, Tyler BM, Wang Y. Phytophthora sojae avirulence effector Avr3b is a secreted NADH and ADP-ribose pyrophosphorylase that modulates plant immunity. Plos Pathogens. 7: e1002353. PMID 22102810 DOI: 10.1371/Journal.Ppat.1002353  0.415
2011 Gu B, Kale SD, Wang Q, Wang D, Pan Q, Cao H, Meng Y, Kang Z, Tyler BM, Shan W. Rust secreted protein Ps87 is conserved in diverse fungal pathogens and contains a RXLR-like motif sufficient for translocation into plant cells. Plos One. 6: e27217. PMID 22076138 DOI: 10.1371/Journal.Pone.0027217  0.383
2011 Kale SD, Tyler BM. Entry of oomycete and fungal effectors into plant and animal host cells. Cellular Microbiology. 13: 1839-48. PMID 21819515 DOI: 10.1111/J.1462-5822.2011.01659.X  0.333
2011 Falin LJ, Tyler BM. Using interpolation to estimate system uncertainty in gene expression experiments. Plos One. 6: e22071. PMID 21799771 DOI: 10.1371/Journal.Pone.0022071  0.334
2011 Dong S, Yu D, Cui L, Qutob D, Tedman-Jones J, Kale SD, Tyler BM, Wang Y, Gijzen M. Sequence variants of the Phytophthora sojae RXLR effector Avr3a/5 are differentially recognized by Rps3a and Rps5 in soybean. Plos One. 6: e20172. PMID 21779316 DOI: 10.1371/Journal.Pone.0020172  0.463
2011 Plett JM, Kemppainen M, Kale SD, Kohler A, Legué V, Brun A, Tyler BM, Pardo AG, Martin F. A secreted effector protein of Laccaria bicolor is required for symbiosis development. Current Biology : Cb. 21: 1197-203. PMID 21757352 DOI: 10.1016/J.Cub.2011.05.033  0.331
2011 Wang Q, Han C, Ferreira AO, Yu X, Ye W, Tripathy S, Kale SD, Gu B, Sheng Y, Sui Y, Wang X, Zhang Z, Cheng B, Dong S, Shan W, ... ... Tyler BM, et al. Transcriptional programming and functional interactions within the Phytophthora sojae RXLR effector repertoire. The Plant Cell. 23: 2064-86. PMID 21653195 DOI: 10.1105/Tpc.111.086082  0.363
2011 Kale SD, Tyler BM. Assaying effector function in planta using double-barreled particle bombardment. Methods in Molecular Biology (Clifton, N.J.). 712: 153-72. PMID 21359807 DOI: 10.1007/978-1-61737-998-7_13  0.43
2011 Rouxel T, Grandaubert J, Hane JK, Hoede C, van de Wouw AP, Couloux A, Dominguez V, Anthouard V, Bally P, Bourras S, Cozijnsen AJ, Ciuffetti LM, Degrave A, Dilmaghani A, Duret L, ... ... Tyler BM, et al. Effector diversification within compartments of the Leptosphaeria maculans genome affected by Repeat-Induced Point mutations. Nature Communications. 2: 202. PMID 21326234 DOI: 10.1038/Ncomms1189  0.401
2011 Sun F, Li D, Tyler BM, Capelluto DG. Characterization of the Phosphatidylinositol 3-Phosphate Binding Mechanism of the Phytophthora Sojae Effector Avh5 Biophysical Journal. 100: 551a. DOI: 10.1016/J.Bpj.2010.12.3208  0.321
2010 Baxter L, Tripathy S, Ishaque N, Boot N, Cabral A, Kemen E, Thines M, Ah-Fong A, Anderson R, Badejoko W, Bittner-Eddy P, Boore JL, Chibucos MC, Coates M, Dehal P, ... ... Tyler BM, et al. Signatures of adaptation to obligate biotrophy in the Hyaloperonospora arabidopsidis genome. Science (New York, N.Y.). 330: 1549-51. PMID 21148394 DOI: 10.1126/Science.1195203  0.381
2010 Torto-Alalibo T, Collmer CW, Gwinn-Giglio M, Lindeberg M, Meng S, Chibucos MC, Tseng TT, Lomax J, Biehl B, Ireland A, Bird D, Dean RA, Glasner JD, Perna N, Setubal JC, ... ... Tyler BM, et al. Unifying themes in microbial associations with animal and plant hosts described using the gene ontology. Microbiology and Molecular Biology Reviews : Mmbr. 74: 479-503. PMID 21119014 DOI: 10.1128/Mmbr.00017-10  0.452
2010 Kale SD, Gu B, Capelluto DG, Dou D, Feldman E, Rumore A, Arredondo FD, Hanlon R, Fudal I, Rouxel T, Lawrence CB, Shan W, Tyler BM. External lipid PI3P mediates entry of eukaryotic pathogen effectors into plant and animal host cells. Cell. 142: 284-95. PMID 20655469 DOI: 10.1016/J.Cell.2010.06.008  0.325
2010 Lévesque CA, Brouwer H, Cano L, Hamilton JP, Holt C, Huitema E, Raffaele S, Robideau GP, Thines M, Win J, Zerillo MM, Beakes GW, Boore JL, Busam D, Dumas B, ... ... Tyler BM, et al. Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire. Genome Biology. 11: R73. PMID 20626842 DOI: 10.1186/Gb-2010-11-7-R73  0.487
2010 Dou D, Kale SD, Liu T, Tang Q, Wang X, Arredondo FD, Basnayake S, Whisson S, Drenth A, Maclean D, Tyler BM. Different domains of Phytophthora sojae effector Avr4/6 are recognized by soybean resistance genes Rps4 and Rps6. Molecular Plant-Microbe Interactions : Mpmi. 23: 425-35. PMID 20192830 DOI: 10.1094/Mpmi-23-4-0425  0.492
2010 Wang H, Waller L, Tripathy S, St. Martin SK, Zhou L, Krampis K, Tucker DM, Mao Y, Hoeschele I, Saghai Maroof M, Tyler BM, Dorrance AE. Analysis of Genes Underlying Soybean Quantitative Trait Loci Conferring Partial Resistance to Phytophthora sojae The Plant Genome. 3: 23-40. DOI: 10.3835/Plantgenome2009.12.0029  0.366
2009 Tyler BM. Viewing the microbial world through the lens of the Gene Ontology. Trends in Microbiology. 17: 259-61. PMID 19577929 DOI: 10.1016/J.Tim.2009.05.002  0.328
2009 Dong S, Qutob D, Tedman-Jones J, Kuflu K, Wang Y, Tyler BM, Gijzen M. The Phytophthora sojae avirulence locus Avr3c encodes a multi-copy RXLR effector with sequence polymorphisms among pathogen strains. Plos One. 4: e5556. PMID 19440541 DOI: 10.1371/Journal.Pone.0005556  0.48
2009 Qutob D, Tedman-Jones J, Dong S, Kuflu K, Pham H, Wang Y, Dou D, Kale SD, Arredondo FD, Tyler BM, Gijzen M. Copy number variation and transcriptional polymorphisms of Phytophthora sojae RXLR effector genes Avr1a and Avr3a. Plos One. 4: e5066. PMID 19343173 DOI: 10.1371/Journal.Pone.0005066  0.458
2009 Meng S, Torto-Alalibo T, Chibucos MC, Tyler BM, Dean RA. Common processes in pathogenesis by fungal and oomycete plant pathogens, described with Gene Ontology terms. Bmc Microbiology. 9: S7. PMID 19278555 DOI: 10.1186/1471-2180-9-S1-S7  0.346
2009 Chibucos MC, Tyler BM. Common themes in nutrient acquisition by plant symbiotic microbes, described by the Gene Ontology. Bmc Microbiology. 9: S6. PMID 19278554 DOI: 10.1186/1471-2180-9-S1-S6  0.377
2009 Chibucos MC, Collmer CW, Torto-Alalibo T, Gwinn-Giglio M, Lindeberg M, Li D, Tyler BM. Programmed cell death in host-symbiont associations, viewed through the Gene Ontology. Bmc Microbiology. 9: S5. PMID 19278553 DOI: 10.1186/1471-2180-9-S1-S5  0.35
2009 Torto-Alalibo T, Collmer CW, Lindeberg M, Bird D, Collmer A, Tyler BM. Common and contrasting themes in host cell-targeted effectors from bacterial, fungal, oomycete and nematode plant symbionts described using the Gene Ontology. Bmc Microbiology. 9: S3. PMID 19278551 DOI: 10.1186/1471-2180-9-S1-S3  0.415
2009 Tseng TT, Tyler BM, Setubal JC. Protein secretion systems in bacterial-host associations, and their description in the Gene Ontology. Bmc Microbiology. 9: S2. PMID 19278550 DOI: 10.1186/1471-2180-9-S1-S2  0.367
2009 Zhou L, Mideros SX, Bao L, Hanlon R, Arredondo FD, Tripathy S, Krampis K, Jerauld A, Evans C, St Martin SK, Maroof MA, Hoeschele I, Dorrance AE, Tyler BM. Infection and genotype remodel the entire soybean transcriptome. Bmc Genomics. 10: 49. PMID 19171053 DOI: 10.1186/1471-2164-10-49  0.336
2009 Tyler BM. Entering and breaking: virulence effector proteins of oomycete plant pathogens. Cellular Microbiology. 11: 13-20. PMID 18783481 DOI: 10.1111/J.1462-5822.2008.01240.X  0.338
2009 Qutob D, Tedman-Jones J, Dong S, Kuflu K, Pham H, Wang Y, Dou D, Kale SD, Arredondo FD, Tyler BM, Gijzen M. Correction: Copy Number Variation and Transcriptional Polymorphisms of Phytophthora sojae RXLR Effector Genes Avr1a and Avr3a Plos One. 4. DOI: 10.1371/annotation/2a2adcf8-afbc-4d46-92c6-d543d6b29182  0.304
2008 Dou D, Kale SD, Wang X, Jiang RH, Bruce NA, Arredondo FD, Zhang X, Tyler BM. RXLR-mediated entry of Phytophthora sojae effector Avr1b into soybean cells does not require pathogen-encoded machinery. The Plant Cell. 20: 1930-47. PMID 18621946 DOI: 10.1105/Tpc.107.056093  0.394
2008 Dou D, Kale SD, Wang X, Chen Y, Wang Q, Wang X, Jiang RH, Arredondo FD, Anderson RG, Thakur PB, McDowell JM, Wang Y, Tyler BM. Conserved C-terminal motifs required for avirulence and suppression of cell death by Phytophthora sojae effector Avr1b. The Plant Cell. 20: 1118-33. PMID 18390593 DOI: 10.1105/Tpc.107.057067  0.4
2008 Jiang RH, Tripathy S, Govers F, Tyler BM. RXLR effector reservoir in two Phytophthora species is dominated by a single rapidly evolving superfamily with more than 700 members. Proceedings of the National Academy of Sciences of the United States of America. 105: 4874-9. PMID 18344324 DOI: 10.1073/Pnas.0709303105  0.486
2007 Tyler BM. Phytophthora sojae: root rot pathogen of soybean and model oomycete. Molecular Plant Pathology. 8: 1-8. PMID 20507474 DOI: 10.1111/J.1364-3703.2006.00373.X  0.396
2007 Torto-Alalibo TA, Tripathy S, Smith BM, Arredondo FD, Zhou L, Li H, Chibucos MC, Qutob D, Gijzen M, Mao C, Sobral BW, Waugh ME, Mitchell TK, Dean RA, Tyler BM. Expressed sequence tags from phytophthora sojae reveal genes specific to development and infection. Molecular Plant-Microbe Interactions : Mpmi. 20: 781-93. PMID 17601166 DOI: 10.1094/Mpmi-20-7-0781  0.422
2007 Martin FN, Bensasson D, Tyler BM, Boore JL. Mitochondrial genome sequences and comparative genomics of Phytophthora ramorum and P. sojae. Current Genetics. 51: 285-96. PMID 17310332 DOI: 10.1007/S00294-007-0121-6  0.377
2006 Krampis K, Tyler BM, Boore JL. Extensive variation in nuclear mitochondrial DNA content between the genomes of Phytophthora sojae and Phytophthora ramorum. Molecular Plant-Microbe Interactions : Mpmi. 19: 1329-36. PMID 17153917 DOI: 10.1094/Mpmi-19-1329  0.384
2006 Tripathy S, Tyler BM. The repertoire of transfer RNA genes is tuned to codon usage bias in the genomes of Phytophthora sojae and Phytophthora ramorum. Molecular Plant-Microbe Interactions : Mpmi. 19: 1322-8. PMID 17153916 DOI: 10.1094/Mpmi-19-1322  0.425
2006 Jiang RH, Tyler BM, Govers F. Comparative analysis of Phytophthora genes encoding secreted proteins reveals conserved synteny and lineage-specific gene duplications and deletions. Molecular Plant-Microbe Interactions : Mpmi. 19: 1311-21. PMID 17153915 DOI: 10.1094/Mpmi-19-1311  0.508
2006 Zhang X, Scheuring C, Tripathy S, Xu Z, Wu C, Ko A, Tian SK, Arredondo F, Lee MK, Santos FA, Jiang RH, Zhang HB, Tyler BM. An integrated BAC and genome sequence physical map of Phytophthora sojae. Molecular Plant-Microbe Interactions : Mpmi. 19: 1302-10. PMID 17153914 DOI: 10.1094/Mpmi-19-1302  0.341
2006 Valer K, Fliegmann J, Fröhlich A, Tyler BM, Ebel J. Spatial and temporal expression patterns of Avr1b-1 and defense-related genes in soybean plants upon infection with Phytophthora sojae. Fems Microbiology Letters. 265: 60-8. PMID 17010107 DOI: 10.1111/J.1574-6968.2006.00467.X  0.442
2006 Tyler BM, Tripathy S, Zhang X, Dehal P, Jiang RH, Aerts A, Arredondo FD, Baxter L, Bensasson D, Beynon JL, Chapman J, Damasceno CM, Dorrance AE, Dou D, Dickerman AW, et al. Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis. Science (New York, N.Y.). 313: 1261-6. PMID 16946064 DOI: 10.1126/Science.1128796  0.42
2006 Tripathy S, Pandey VN, Fang B, Salas F, Tyler BM. VMD: a community annotation database for oomycetes and microbial genomes. Nucleic Acids Research. 34: D379-81. PMID 16381891 DOI: 10.1093/Nar/Gkj042  0.412
2005 Rehmany AP, Gordon A, Rose LE, Allen RL, Armstrong MR, Whisson SC, Kamoun S, Tyler BM, Birch PR, Beynon JL. Differential recognition of highly divergent downy mildew avirulence gene alleles by RPP1 resistance genes from two Arabidopsis lines. The Plant Cell. 17: 1839-50. PMID 15894715 DOI: 10.1105/Tpc.105.031807  0.483
2004 Shan W, Cao M, Leung D, Tyler BM. The Avr1b locus of Phytophthora sojae encodes an elicitor and a regulator required for avirulence on soybean plants carrying resistance gene Rps1b. Molecular Plant-Microbe Interactions : Mpmi. 17: 394-403. PMID 15077672 DOI: 10.1094/Mpmi.2004.17.4.394  0.458
2002 Tyler BM. Molecular basis of recognition between phytophthora pathogens and their hosts. Annual Review of Phytopathology. 40: 137-67. PMID 12147757 DOI: 10.1146/Annurev.Phyto.40.120601.125310  0.409
2001 Chamnanpunt J, Shan WX, Tyler BM. High frequency mitotic gene conversion in genetic hybrids of the oomycete Phytophthora sojae. Proceedings of the National Academy of Sciences of the United States of America. 98: 14530-5. PMID 11724938 DOI: 10.1073/Pnas.251464498  0.398
2001 Tyler BM. Genetics and genomics of the oomycete-host interface. Trends in Genetics : Tig. 17: 611-4. PMID 11672843 DOI: 10.1016/S0168-9525(01)02517-3  0.393
2000 de la Serna I, Cujec TP, Shi Y, Tyler BM. Non-coordinate regulation of 5S rRNA genes and the gene encoding the 5S rRNA-binding ribosomal protein homolog in Neurospora crassa. Molecular & General Genetics : Mgg. 263: 987-94. PMID 10954084 DOI: 10.1007/Pl00008699  0.719
1999 de la Serna I, Ng D, Tyler BM. Carbon regulation of ribosomal genes in Neurospora crassa occurs by a mechanism which does not require Cre-1, the homologue of the Aspergillus carbon catabolite repressor, CreA. Fungal Genetics and Biology : Fg & B. 26: 253-69. PMID 10361038 DOI: 10.1006/Fgbi.1999.1121  0.739
1996 Cujec TP, Tyler BM. Functional promoter elements common to ribosomal protein and ribosomal RNA genes in Neurospora crassa. Molecular & General Genetics : Mgg. 253: 205-16. PMID 9003305 DOI: 10.1007/S004380050314  0.466
1996 Mao Y, Tyler BM. Cloning and sequence analysis of elicitin genes of Phytophthora sojae. Fungal Genetics and Biology : Fg & B. 20: 169-72. PMID 8810521 DOI: 10.1006/Fgbi.1996.0031  0.438
1996 Mao Y, Tyler BM. The Phytophthora sojae genome contains tandem repeat sequences which vary from strain to strain. Fungal Genetics and Biology : Fg & B. 20: 43-51. PMID 8634945 DOI: 10.1006/Fgbi.1996.0008  0.464
1996 Cujec TP, Tyler BM. Nutritional and growth control of ribosomal protein mRNA and rRNA in Neurospora crassa. Nucleic Acids Research. 24: 943-50. PMID 8600464 DOI: 10.1093/Nar/24.5.943  0.353
1996 Gijzen M, Förster H, Coffey MD, Tyler B. Cosegregation of Avr4 and Avr6 in Phytophthora sojae Canadian Journal of Botany. 74: 800-802. DOI: 10.1139/B96-100  0.436
1993 Judelson HS, Coffey MD, Arredondo FR, Tyler BM. Transformation of the oomycete pathogen Phytophthora megasperma f. sp. glycinea occurs by DNA integration into single or multiple chromosomes. Current Genetics. 23: 211-8. PMID 8382110 DOI: 10.1007/Bf00351498  0.322
1993 Kamoun S, Klucher KM, Coffey MD, Tyler BM. A gene encoding a host-specific elicitor protein of Phytophthora parasitica. Molecular Plant-Microbe Interactions : Mpmi. 6: 573-81. PMID 8274771 DOI: 10.1094/Mpmi-6-573  0.435
1993 Tyler BM. To kill or not to kill: the genetic relationship between a parasite and an endophyte. Trends in Microbiology. 1: 252-4. PMID 8162404 DOI: 10.1016/0966-842X(93)90045-S  0.318
1992 Judelson HS, Tyler BM, Michelmore RW. Regulatory sequences for expressing genes in oomycete fungi. Molecular & General Genetics : Mgg. 234: 138-46. PMID 1495476 DOI: 10.1007/Bf00272355  0.49
1991 Shi YG, Tyler BM. Coordinate expression of ribosomal protein genes in Neurospora crassa and identification of conserved upstream sequences. Nucleic Acids Research. 19: 6511-7. PMID 1836561 DOI: 10.1093/Nar/19.23.6511  0.493
1991 Shi YG, Tyler BM. All internal promoter elements of Neurospora crassa 5 S rRNA and tRNA genes, including the A boxes, are functionally gene-specific. The Journal of Biological Chemistry. 266: 8015-9. PMID 1827115  0.357
1991 Judelson HS, Tyler BM, Michelmore RW. Transformation of the oomycete pathogen, Phytophthora infestans. Molecular Plant-Microbe Interactions : Mpmi. 4: 602-7. PMID 1804404 DOI: 10.1094/Mpmi-4-602  0.397
1990 Tyler BM. Two complex regions, including a TATA sequence, are required for transcription by RNA polymerase I in Neurospora crassa. Nucleic Acids Research. 18: 1805-11. PMID 2139932 DOI: 10.1093/Nar/18.7.1805  0.455
1990 Tyler BM, Harrison K. A Neurospora crassa ribosomal protein gene, homologous to yeast CRY1, contains sequences potentially coordinating its transcription with rRNA genes. Nucleic Acids Research. 18: 5759-65. PMID 1977135 DOI: 10.1093/Nar/18.19.5759  0.511
1990 Austin B, Hall RM, Tyler BM. Optimized vectors and selection for transformation of Neurospora crassa and Aspergillus nidulans to bleomycin and phleomycin resistance. Gene. 93: 157-62. PMID 1699844 DOI: 10.1016/0378-1119(90)90152-H  0.413
1990 TYLER B. Coordinate transcription of ribosomal. Component genes in Cell Biology International Reports. 14: 15. DOI: 10.1016/0309-1651(90)90168-X  0.334
1990 Austin B, Tyler BM. Strategies for high-efficiency cotransformation ofNeurospora crassa Experimental Mycology. 14: 9-17. DOI: 10.1016/0147-5975(90)90082-5  0.365
1989 Geever RF, Huiet L, Baum JA, Tyler BM, Patel VB, Rutledge BJ, Case ME, Giles NH. DNA sequence, organization and regulation of the qa gene cluster of Neurospora crassa. Journal of Molecular Biology. 207: 15-34. PMID 2525625 DOI: 10.1016/0022-2836(89)90438-5  0.775
1987 Tyler BM. Transcription of Neurospora crassa 5 S rRNA genes requires a TATA box and three internal elements. Journal of Molecular Biology. 196: 801-11. PMID 2960818 DOI: 10.1016/0022-2836(87)90406-2  0.442
1985 Tyler BM, Giles NH. Accurate transcription of cloned Neurospora RNA polymerase II-dependent genes in vitro by homologous soluble extracts. Proceedings of the National Academy of Sciences of the United States of America. 82: 5450-4. PMID 2991927 DOI: 10.1073/Pnas.82.16.5450  0.649
1985 Tyler BM, Giles NH. Structure of a Neurospora RNA polymerase I promoter defined by transcription in vitro with homologous extracts. Nucleic Acids Research. 13: 4311-32. PMID 2989792 DOI: 10.1093/Nar/13.12.4311  0.613
1985 Giles NH, Case ME, Baum J, Geever R, Huiet L, Patel V, Tyler B. Gene organization and regulation in the qa (quinic acid) gene cluster of Neurospora crassa. Microbiological Reviews. 49: 338-58. PMID 2931582 DOI: 10.1128/Mmbr.49.3.338-358.1985  0.748
1985 Giles NH, Case ME, Baum J, Geever R, Huiet L, Patel V, Tyler B. Gene organization and regulation in the qa (quinic acid) gene cluster of Neurospora crassa. Microbiological Reviews. 49: 338-358. DOI: 10.1128/mmbr.49.3.338-358.1985  0.737
1984 Huiet L, Tyler BM, Giles NH. A leucine tRNA gene adjacent to the QA gene cluster of Neurospora crassa. Nucleic Acids Research. 12: 5757-65. PMID 6235483 DOI: 10.1093/Nar/12.14.5757  0.681
1984 Tyler BM, Giles NH. Accurate transcription of homologous 5S rRNA and tRNA genes and splicing of tRNA in vitro by soluble extracts of Neurospora. Nucleic Acids Research. 12: 5737-55. PMID 6235482 DOI: 10.1093/Nar/12.14.5737  0.639
1984 Tyler BM, Geever RF, Case ME, Giles NH. Cis-acting and trans-acting regulatory mutations define two types of promoters controlled by the qa-1F gene of Neurospora. Cell. 36: 493-502. PMID 6198093 DOI: 10.1016/0092-8674(84)90242-3  0.727
1984 Huiet L, Tyler BM, Giles NH. A leucine tRNA gene adjacent to the QA gene du of Neurospora crassa Nucleic Acids Research. 12: 5757-5765. DOI: 10.1093/nar/12.14.5757  0.617
1983 Geever RF, Case ME, Tyler BM, Buxton F, Giles NH. Point mutations and DNA rearrangements 5' to the inducible qa-2 gene of Neurospora allow activator protein-independent transcription. Proceedings of the National Academy of Sciences of the United States of America. 80: 7298-302. PMID 6316356 DOI: 10.1073/Pnas.80.23.7298  0.743
1982 Tyler BM, Cowman AF, Gerondakis SD, Adams JM, Bernard O. mRNA for surface immunoglobulin gamma chains encodes a highly conserved transmembrane sequence and a 28-residue intracellular domain. Proceedings of the National Academy of Sciences of the United States of America. 79: 2008-12. PMID 6804950 DOI: 10.1073/Pnas.79.6.2008  0.555
1981 Tyler BM, Cowman AF, Adams JM, Harris AW. Generation of long mRNA for membrane immunoglobulin gamma 2a chains by differential splicing. Nature. 293: 406-8. PMID 7278993 DOI: 10.1038/293406A0  0.529
1981 Cory S, Tyler BM, Adams JM. Sets of immunoglobulin V kappa genes homologous to ten cloned V kappa sequences: implications for the number of germline V kappa genes. Journal of Molecular and Applied Genetics. 1: 103-16. PMID 6286818  0.564
1981 Adams JM, Kemp DJ, Bernard O, Gough N, Webb E, Tyler B, Gerondakis S, Cory S. Organization and expression of murine immunoglobulin genes. Immunological Reviews. 59: 5-32. PMID 6273295 DOI: 10.1111/J.1600-065X.1981.Tb00454.X  0.593
1980 Tyler BM, Adams JM. Organization of the sequences flanking immunoglobulin heavy chain genes and their role in class switching. Nucleic Acids Research. 8: 5579-98. PMID 6780980 DOI: 10.1093/Nar/8.23.5579  0.602
1980 Gough NM, Kemp DJ, Tyler BM, Adams JM, Cory S. Intervening sequences divide the gene for the constant region of mouse immunoglobulin mu chains into segments, each encoding a domain. Proceedings of the National Academy of Sciences of the United States of America. 77: 554-8. PMID 6767239 DOI: 10.1073/Pnas.77.1.554  0.633
1980 Adams JM, Gough NM, Webb EA, Tyler BM, Jackson J, Cory S. Molecular cloning of mouse immunoglobulin heavy chain messenger ribonucleic acids coding for mu, alpha, gamma 1, gamma 2a, and gamma 3 chains. Biochemistry. 19: 2711-9. PMID 6249338 DOI: 10.1021/Bi00553A027  0.486
1980 Tyler BM, Adams JM. Enrichment of specific genes from genomic DNA or from clone library DNA, using R-looping. Gene. 10: 147-55. PMID 6248419 DOI: 10.1016/0378-1119(80)90132-8  0.553
1979 Pahel G, Tyler B. A new glnA-linked regulatory gene for glutamine synthetase in Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 76: 4544-8. PMID 41243  0.3
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