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Eric M. Mendenhall, Ph.D. - Publications

Affiliations: 
2006 University of Minnesota, Twin Cities, Minneapolis, MN 
Area:
Cell Biology, Genetics, Molecular Biology
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27 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Moyers BA, Partridge EC, Mackiewicz M, Betti MJ, Darji R, Meadows SK, Newberry KM, Brandsmeier LA, Wold BJ, Mendenhall EM, Myers RM. Characterization of human transcription factor function and patterns of gene regulation in HepG2 cells. Genome Research. PMID 37852782 DOI: 10.1101/gr.278205.123  0.421
2020 Moore JE, Purcaro MJ, Pratt HE, Epstein CB, Shoresh N, Adrian J, Kawli T, Davis CA, Dobin A, Kaul R, Halow J, Van Nostrand EL, Freese P, Gorkin DU, ... ... Mendenhall EM, et al. Expanded encyclopaedias of DNA elements in the human and mouse genomes. Nature. 583: 699-710. PMID 32728249 DOI: 10.1038/S41586-020-2493-4  0.411
2020 Snyder MP, Gingeras TR, Moore JE, Weng Z, Gerstein MB, Ren B, Hardison RC, Stamatoyannopoulos JA, Graveley BR, Feingold EA, Pazin MJ, Pagan M, Gilchrist DA, Hitz BC, ... ... Mendenhall EM, et al. Perspectives on ENCODE. Nature. 583: 693-698. PMID 32728248 DOI: 10.1038/S41586-020-2449-8  0.451
2020 Partridge EC, Chhetri SB, Prokop JW, Ramaker RC, Jansen CS, Goh ST, Mackiewicz M, Newberry KM, Brandsmeier LA, Meadows SK, Messer CL, Hardigan AA, Coppola CJ, Dean EC, Jiang S, ... ... Mendenhall EM, et al. Occupancy maps of 208 chromatin-associated proteins in one human cell type. Nature. 583: 720-728. PMID 32728244 DOI: 10.1038/S41586-020-2023-4  0.464
2020 Meadows SK, Brandsmeier LA, Newberry KM, Betti MJ, Nesmith AS, Mackiewicz M, Partridge EC, Mendenhall EM, Myers RM. Epitope Tagging ChIP-Seq of DNA Binding Proteins Using CETCh-Seq. Methods in Molecular Biology (Clifton, N.J.). 2117: 3-34. PMID 31960370 DOI: 10.1007/978-1-0716-0301-7_1  0.354
2019 Swahn H, Sabith Ebron J, Lamar KM, Yin S, Kerschner JL, NandyMazumdar M, Coppola C, Mendenhall EM, Leir SH, Harris A. Coordinate regulation of ELF5 and EHF at the chr11p13 CF modifier region. Journal of Cellular and Molecular Medicine. PMID 31557407 DOI: 10.1111/Jcmm.14646  0.422
2018 Prokop JW, Yeo NC, Ottmann C, Chhetri SB, Florus KL, Ross EJ, Sosonkina N, Link BA, Freedman BI, Coppola CJ, McDermott-Roe C, Leysen S, Milroy LG, Meijer FA, Geurts AM, ... ... Mendenhall EM, et al. Characterization of Coding/Noncoding Variants forin Patients with CKD. Journal of the American Society of Nephrology : Jasn. PMID 29476007 DOI: 10.1681/Asn.2017080856  0.358
2016 Coppola CJ, Ramaker R, Mendenhall EM. Identification and Function of Enhancers in the Human Genome. Human Molecular Genetics. PMID 27402881 DOI: 10.1093/Hmg/Ddw216  0.423
2016 Partridge EC, Watkins TA, Mendenhall EM. Every transcription factor deserves its map: Scaling up epitope tagging of proteins to bypass antibody problems. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. PMID 27311628 DOI: 10.1002/Bies.201600028  0.389
2015 Savic D, Partridge EC, Newberry KM, Smith SB, Meadows SK, Roberts BS, Mackiewicz M, Mendenhall EM, Myers RM. CETCh-seq: CRISPR epitope tagging ChIP-seq of DNA-binding proteins. Genome Research. 25: 1581-9. PMID 26355004 DOI: 10.1101/Gr.193540.115  0.389
2015 Biagioli M, Ferrari F, Mendenhall EM, Zhang Y, Erdin S, Vijayvargia R, Vallabh SM, Solomos N, Manavalan P, Ragavendran A, Ozsolak F, Lee JM, Talkowski ME, Gusella JF, Macdonald ME, et al. Htt CAG repeat expansion confers pleiotropic gains of mutant huntingtin function in chromatin regulation. Human Molecular Genetics. 24: 2442-57. PMID 25574027 DOI: 10.1093/Hmg/Ddv006  0.422
2014 Attanasio C, Nord AS, Zhu Y, Blow MJ, Biddie SC, Mendenhall EM, Dixon J, Wright C, Hosseini R, Akiyama JA, Holt A, Plajzer-Frick I, Shoukry M, Afzal V, Ren B, et al. Tissue-specific SMARCA4 binding at active and repressed regulatory elements during embryogenesis. Genome Research. 24: 920-9. PMID 24752179 DOI: 10.1101/Gr.168930.113  0.411
2013 Mendenhall EM, Williamson KE, Reyon D, Zou JY, Ram O, Joung JK, Bernstein BE. Locus-specific editing of histone modifications at endogenous enhancers. Nature Biotechnology. 31: 1133-6. PMID 24013198 DOI: 10.1038/Nbt.2701  0.446
2013 Mendenhall EM, Williamson K, Reyon D, Joung JK, Bernstein BE. Identification of promoter targets of enhancers by epigenetic knockdown using TAL DNA binding proteins Epigenetics & Chromatin. 6. DOI: 10.1186/1756-8935-6-S1-O12  0.429
2012 Mendenhall EM, Bernstein BE. DNA-protein interactions in high definition. Genome Biology. 13: 139. PMID 22283870 DOI: 10.1186/Gb-2012-13-1-139  0.309
2010 Mendenhall EM, Koche RP, Truong T, Zhou VW, Issac B, Chi AS, Ku M, Bernstein BE. GC-rich sequence elements recruit PRC2 in mammalian ES cells. Plos Genetics. 6: e1001244. PMID 21170310 DOI: 10.1371/Journal.Pgen.1001244  0.466
2008 Ku M, Koche RP, Rheinbay E, Mendenhall EM, Endoh M, Mikkelsen TS, Presser A, Nusbaum C, Xie X, Chi AS, Adli M, Kasif S, Ptaszek LM, Cowan CA, Lander ES, et al. Genomewide analysis of PRC1 and PRC2 occupancy identifies two classes of bivalent domains. Plos Genetics. 4: e1000242. PMID 18974828 DOI: 10.1371/Journal.Pgen.1000242  0.419
2008 Mendenhall EM, Bernstein BE. Chromatin state maps: new technologies, new insights. Current Opinion in Genetics & Development. 18: 109-15. PMID 18339538 DOI: 10.1016/J.Gde.2008.01.010  0.405
2007 Mikkelsen TS, Ku M, Jaffe DB, Issac B, Lieberman E, Giannoukos G, Alvarez P, Brockman W, Kim TK, Koche RP, Lee W, Mendenhall E, O'Donovan A, Presser A, Russ C, et al. Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. Nature. 448: 553-60. PMID 17603471 DOI: 10.1038/Nature06008  0.492
2006 Pickart MA, Klee EW, Nielsen AL, Sivasubbu S, Mendenhall EM, Bill BR, Chen E, Eckfeldt CE, Knowlton M, Robu ME, Larson JD, Deng Y, Schimmenti LA, Ellis LB, Verfaillie CM, et al. Genome-wide reverse genetics framework to identify novel functions of the vertebrate secretome. Plos One. 1: e104. PMID 17218990 DOI: 10.1371/Journal.Pone.0000104  0.726
2005 Eckfeldt CE, Mendenhall EM, Verfaillie CM. The molecular repertoire of the 'almighty' stem cell. Nature Reviews. Molecular Cell Biology. 6: 726-37. PMID 16103873 DOI: 10.1038/Nrm1713  0.72
2005 Eckfeldt CE, Mendenhall EM, Flynn CM, Wang TF, Pickart MA, Grindle SM, Ekker SC, Verfaillie CM. Functional analysis of human hematopoietic stem cell gene expression using zebrafish. Plos Biology. 3: e254. PMID 16089502 DOI: 10.1371/Journal.Pbio.0030254  0.78
2005 Leung AY, Mendenhall EM, Kwan TT, Liang R, Eckfeldt C, Chen E, Hammerschmidt M, Grindley S, Ekker SC, Verfaillie CM. Characterization of expanded intermediate cell mass in zebrafish chordin morphant embryos. Developmental Biology. 277: 235-54. PMID 15572152 DOI: 10.1016/J.Ydbio.2004.09.032  0.75
2005 Flynn CM, Mendenhall EM, Eckfeldt CE, Wagner JE, Verfaillie CM. SNX5, a Novel Gene Linked to Fanconi Anemia Causes Hematopoietic Failure When Knocked down in Zebrafish. Blood. 106: 183-183. DOI: 10.1182/Blood.V106.11.183.183  0.76
2005 Eckfeldt CE, Mendenhall EM, Verfaillie CM. SPRY1 Is a Negative Regulator of Long-Term In Vivo Engraftment and Ex Vivo Expansion of Primitive Human Umbilical Cord Blood Cells. Blood. 106: 1715-1715. DOI: 10.1182/Blood.V106.11.1715.1715  0.755
2004 Mendenhall EM, Eckfeldt CE, Ekker SC, Verfaillie CM. The Role of Sprouty Family Members in Hematopiesis in Zebrafish and Mammals. Blood. 104: 137-137. DOI: 10.1182/Blood.V104.11.137.137  0.765
2004 Eckfeldt CE, Mendenhall EM, Ekker SC, Verfaillie CM. Functional Analysis of the Differential Gene Expression Profile of Human HSC Using a Functional Genomics Screen in the Zebrafish. Blood. 104: 136-136. DOI: 10.1182/Blood.V104.11.136.136  0.776
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