| Year |
Citation |
Score |
| 2023 |
Craig JM, Gerhard GS, Sharma S, Yankovskiy A, Miura S, Kumar S. Methods for Estimating Personal Disease Risk and Phylogenetic Diversity of Hematopoietic Stem Cells. Molecular Biology and Evolution. PMID 38124397 DOI: 10.1093/molbev/msad279 |
0.463 |
|
| 2023 |
Miura S, Dolker T, Sanderford M, Kumar S. Improving cellular phylogenies through the integrated use of mutation order and optimality principles. Computational and Structural Biotechnology Journal. 21: 3894-3903. PMID 37602230 DOI: 10.1016/j.csbj.2023.07.018 |
0.553 |
|
| 2023 |
Zhang J, Kumar S. Masatoshi Nei (1931-2023). Nature Ecology & Evolution. PMID 37380699 DOI: 10.1038/s41559-023-02119-4 |
0.303 |
|
| 2023 |
Huzar J, Shenoy M, Sanderford MD, Kumar S, Miura S. Bootstrap confidence for molecular evolutionary estimates from tumor bulk sequencing data. Frontiers in Bioinformatics. 3: 1090730. PMID 37261293 DOI: 10.3389/fbinf.2023.1090730 |
0.557 |
|
| 2022 |
Chroni A, Miura S, Hamilton L, Vu T, Gaffney SG, Aly V, Karim S, Sanderford M, Townsend JP, Kumar S. Clone Phylogenetics Reveals Metastatic Tumor Migrations, Maps, and Models. Cancers. 14. PMID 36077861 DOI: 10.3390/cancers14174326 |
0.466 |
|
| 2022 |
Amendola A, Canuti M, Bianchi S, Kumar S, Fappani C, Gori M, Colzani D, Kosakovsky Pond SL, Miura S, Baggieri M, Marchi A, Borghi E, Zuccotti G, Raviglione MC, Magurano F, et al. Molecular evidence for SARS-CoV-2 in samples collected from patients with morbilliform eruptions since late 2019 in Lombardy, northern Italy. Environmental Research. 113979. PMID 36029839 DOI: 10.1016/j.envres.2022.113979 |
0.469 |
|
| 2022 |
Miura S, Vu T, Choi J, Townsend JP, Karim S, Kumar S. A phylogenetic approach to study the evolution of somatic mutational processes in cancer. Communications Biology. 5: 617. PMID 35732905 DOI: 10.1038/s42003-022-03560-0 |
0.498 |
|
| 2022 |
Caraballo-Ortiz MA, Miura S, Sanderford M, Dolker T, Tao Q, Weaver S, Pond SLK, Kumar S. TopHap: rapid inference of key phylogenetic structures from common haplotypes in large genome collections with limited diversity. Bioinformatics (Oxford, England). 38: 2719-2726. PMID 35561179 DOI: 10.1093/bioinformatics/btac186 |
0.568 |
|
| 2022 |
Huzar J, Kim H, Kumar S, Miura S. MOCA for Integrated Analysis of Gene Expression and Genetic Variation in Single Cells. Frontiers in Genetics. 13: 831040. PMID 35432484 DOI: 10.3389/fgene.2022.831040 |
0.57 |
|
| 2022 |
Caraballo-Ortiz MA, Miura S, Sanderford M, Dolker T, Tao Q, Weaver S, Pond SLK, Kumar S. TopHap: Rapid inference of key phylogenetic structures from common haplotypes in large genome collections with limited diversity. Bioinformatics (Oxford, England). PMID 35325058 DOI: 10.1093/bioinformatics/btac186 |
0.572 |
|
| 2021 |
Caraballo-Ortiz MA, Miura S, Sanderford M, Dolker T, Tao Q, Weaver S, Pond SLK, Kumar S. TopHap: Rapid inference of key phylogenetic structures from common haplotypes in large genome collections with limited diversity. Biorxiv : the Preprint Server For Biology. PMID 34931186 DOI: 10.1101/2021.12.13.472454 |
0.571 |
|
| 2021 |
Townsend JP, Hassler HB, Wang Z, Miura S, Singh J, Kumar S, Ruddle NH, Galvani AP, Dornburg A. The durability of immunity against reinfection by SARS-CoV-2: a comparative evolutionary study. The Lancet. Microbe. PMID 34632431 DOI: 10.1016/S2666-5247(21)00219-6 |
0.457 |
|
| 2021 |
Chroni A, Miura S, Oladeinde O, Aly V, Kumar S. Migrations of cancer cells through the lens of phylogenetic biogeography. Scientific Reports. 11: 17184. PMID 34433859 DOI: 10.1038/s41598-021-96215-9 |
0.527 |
|
| 2021 |
Kumar S, Sharma S. Evolutionary Sparse Learning for Phylogenomics. Molecular Biology and Evolution. PMID 34343318 DOI: 10.1093/molbev/msab227 |
0.33 |
|
| 2021 |
Kumar S, Tao Q, Weaver S, Sanderford M, Caraballo-Ortiz MA, Sharma S, Pond SLK, Miura S. An evolutionary portrait of the progenitor SARS-CoV-2 and its dominant offshoots in COVID-19 pandemic. Molecular Biology and Evolution. PMID 33942847 DOI: 10.1093/molbev/msab118 |
0.537 |
|
| 2021 |
Tamura K, Stecher G, Kumar S. MEGA11: Molecular Evolutionary Genetics Analysis version 11. Molecular Biology and Evolution. PMID 33892491 DOI: 10.1093/molbev/msab120 |
0.342 |
|
| 2021 |
Jaiswal SK, Mahajan S, Chakraborty A, Kumar S, Sharma VK. The genome sequence of reveals adaptive evolution of drought tolerance mechanisms. Iscience. 24: 102079. PMID 33644713 DOI: 10.1016/j.isci.2021.102079 |
0.302 |
|
| 2020 |
Kumar S, Chroni A, Tamura K, Sanderford M, Oladeinde O, Aly V, Vu T, Miura S. PathFinder: Bayesian inference of clone migration histories in cancer. Bioinformatics (Oxford, England). 36: i675-i683. PMID 33381835 DOI: 10.1093/bioinformatics/btaa795 |
0.488 |
|
| 2020 |
Barba-Montoya J, Tao Q, Kumar S. Using a GTR+Γ substitution model for dating sequence divergence when stationarity and time-reversibility assumptions are violated. Bioinformatics (Oxford, England). 36: i884-i894. PMID 33381826 DOI: 10.1093/bioinformatics/btaa820 |
0.313 |
|
| 2020 |
Kumar S, Tao Q, Weaver S, Sanderford M, Caraballo-Ortiz MA, Sharma S, Pond SLK, Miura S. An evolutionary portrait of the progenitor SARS-CoV-2 and its dominant offshoots in COVID-19 pandemic. Biorxiv : the Preprint Server For Biology. PMID 32995781 DOI: 10.1101/2020.09.24.311845 |
0.543 |
|
| 2020 |
Miura S, Vu T, Deng J, Buturla T, Oladeinde O, Choi J, Kumar S. Power and pitfalls of computational methods for inferring clone phylogenies and mutation orders from bulk sequencing data. Scientific Reports. 10: 3498. PMID 32103044 DOI: 10.1038/S41598-020-59006-2 |
0.539 |
|
| 2020 |
Miura S, Tamura K, Tao Q, Huuki LA, Kosakovsky Pond SL, Priest J, Deng J, Kumar S. A new method for inferring timetrees from temporally sampled molecular sequences. Plos Computational Biology. 16: e1007046. PMID 31951607 DOI: 10.1371/Journal.Pcbi.1007046 |
0.579 |
|
| 2019 |
Chroni A, Vu T, Miura S, Kumar S. Delineation of Tumor Migration Paths by Using a Bayesian Biogeographic Approach. Cancers. 11. PMID 31783570 DOI: 10.3390/Cancers11121880 |
0.491 |
|
| 2019 |
Tao Q, Tamura K, Battistuzzi F, Kumar S. A new method for detecting autocorrelation of evolutionary rates in large phylogenies. Molecular Biology and Evolution. PMID 30689923 DOI: 10.1093/molbev/msz014 |
0.736 |
|
| 2018 |
Miura S, Huuki LA, Buturla T, Vu T, Gomez K, Kumar S. Computational enhancement of single-cell sequences for inferring tumor evolution. Bioinformatics (Oxford, England). 34: i917-i926. PMID 30423071 DOI: 10.1093/Bioinformatics/Bty571 |
0.523 |
|
| 2018 |
Miura S, Gomez K, Murillo O, Huuki LA, Vu T, Buturla T, Kumar S. Predicting clone genotypes from tumor bulk sequencing of multiple samples. Bioinformatics (Oxford, England). PMID 29931046 DOI: 10.1093/Bioinformatics/Bty469 |
0.542 |
|
| 2018 |
Tamura K, Tao Q, Kumar S. Theoretical Foundation of the RelTime Method for Estimating Divergence Times from Variable Evolutionary Rates. Molecular Biology and Evolution. 35: 1770-1782. PMID 29893954 DOI: 10.1093/molbev/msy044 |
0.301 |
|
| 2018 |
Battistuzzi FU, Tao Q, Jones L, Tamura K, Kumar S. RelTime relaxes the strict molecular clock throughout the phylogeny. Genome Biology and Evolution. PMID 29878203 DOI: 10.1093/gbe/evy118 |
0.704 |
|
| 2018 |
Gomez K, Miura S, Huuki LA, Spell BS, Townsend JP, Kumar S. Somatic evolutionary timings of driver mutations. Bmc Cancer. 18: 85. PMID 29347918 DOI: 10.1186/S12885-017-3977-Y |
0.488 |
|
| 2017 |
Kumar S, Konikoff C, Sanderford M, Liu L, Newfeld S, Ye J, Kulathinal RJ. FlyExpress 7: An Integrated Discovery Platform To Study Co-expressed Genes Using In Situ Hybridization Images in Drosophila. G3 (Bethesda, Md.). PMID 28667017 DOI: 10.1534/G3.117.040345 |
0.8 |
|
| 2017 |
Katsura Y, Stanley CE, Kumar S, Nei M. The Reliability and Stability of an Inferred Phylogenetic Tree from Empirical Data. Molecular Biology and Evolution. PMID 28100791 DOI: 10.1093/molbev/msw272 |
0.473 |
|
| 2016 |
Shay JW, Homma N, Zhou R, Naseer MI, Chaudhary AG, Al-Qahtani M, Hirokawa N, Goudarzi M, Fornace AJ, Baeesa S, Hussain D, Bangash M, Alghamdi F, Schulten H, Carracedo A, ... ... Kumar S, et al. Abstracts from the 3rd International Genomic Medicine Conference (3rd IGMC 2015) Bmc Genomics. 17: 487-487. PMID 27454254 DOI: 10.1186/S12864-016-2858-0 |
0.48 |
|
| 2016 |
Kumar S, Hedges SB. Advances in time estimation methods for molecular data. Molecular Biology and Evolution. PMID 26882983 DOI: 10.1093/molbev/msw026 |
0.331 |
|
| 2015 |
Miura S, Tate S, Kumar S. Using Disease-Associated Coding Sequence Variation to Investigate Functional Compensation by Human Paralogous Proteins. Evolutionary Bioinformatics Online. 11: 245-251. PMID 26604664 DOI: 10.4137/Ebo.S30594 |
0.553 |
|
| 2015 |
Filipski A, Tamura K, Billing-Ross P, Murillo O, Kumar S. Phylogenetic placement of metagenomic reads using the minimum evolution principle. Bmc Genomics. 16: S13. PMID 25923672 DOI: 10.1186/1471-2164-16-S1-S13 |
0.725 |
|
| 2015 |
Battistuzzi FU, Billing-Ross P, Murillo O, Filipski A, Kumar S. A Protocol for Diagnosing the Effect of Calibration Priors on Posterior Time Estimates: A Case Study for the Cambrian Explosion of Animal Phyla. Molecular Biology and Evolution. 32: 1907-12. PMID 25808541 DOI: 10.1093/Molbev/Msv075 |
0.775 |
|
| 2014 |
Filipski A, Murillo O, Freydenzon A, Tamura K, Kumar S. Prospects for building large timetrees using molecular data with incomplete gene coverage among species. Molecular Biology and Evolution. 31: 2542-50. PMID 24974376 DOI: 10.1093/Molbev/Msu200 |
0.738 |
|
| 2014 |
Montiel I, Konikoff C, Braun B, Packard M, Gramates SL, Sun Q, Ye J, Kumar S. myFX: a turn-key software for laboratory desktops to analyze spatial patterns of gene expression in Drosophila embryos. Bioinformatics (Oxford, England). 30: 1319-21. PMID 24413523 DOI: 10.1093/Bioinformatics/Btu007 |
0.791 |
|
| 2013 |
Zhang W, Feng D, Li R, Chernikov A, Chrisochoides N, Osgood C, Konikoff C, Newfeld S, Kumar S, Ji S. A mesh generation and machine learning framework for Drosophila gene expression pattern image analysis. Bmc Bioinformatics. 14: 372. PMID 24373308 DOI: 10.1186/1471-2105-14-372 |
0.794 |
|
| 2013 |
Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Molecular Biology and Evolution. 30: 2725-9. PMID 24132122 DOI: 10.1093/Molbev/Mst197 |
0.716 |
|
| 2012 |
Tamura K, Battistuzzi FU, Billing-Ross P, Murillo O, Filipski A, Kumar S. Estimating divergence times in large molecular phylogenies. Proceedings of the National Academy of Sciences of the United States of America. 109: 19333-8. PMID 23129628 DOI: 10.1073/Pnas.1213199109 |
0.799 |
|
| 2012 |
Kumar S, Stecher G, Peterson D, Tamura K. MEGA-CC: computing core of molecular evolutionary genetics analysis program for automated and iterative data analysis. Bioinformatics (Oxford, England). 28: 2685-6. PMID 22923298 DOI: 10.1093/bioinformatics/bts507 |
0.3 |
|
| 2012 |
Konikoff CE, Karr TL, McCutchan M, Newfeld SJ, Kumar S. Comparison of embryonic expression within multigene families using the FlyExpress discovery platform reveals more spatial than temporal divergence. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 241: 150-60. PMID 21960044 DOI: 10.1002/dvdy.22749 |
0.801 |
|
| 2012 |
Kumar S, Filipski AJ, Battistuzzi FU, Kosakovsky Pond SL, Tamura K. Statistics and truth in phylogenomics. Molecular Biology and Evolution. 29: 457-72. PMID 21873298 DOI: 10.1093/molbev/msr202 |
0.792 |
|
| 2011 |
Kumar S, Konikoff C, Van Emden B, Busick C, Davis KT, Ji S, Wu LW, Ramos H, Brody T, Panchanathan S, Ye J, Karr TL, Gerold K, McCutchan M, Newfeld SJ. FlyExpress: visual mining of spatiotemporal patterns for genes and publications in Drosophila embryogenesis. Bioinformatics (Oxford, England). 27: 3319-20. PMID 21994220 DOI: 10.1093/Bioinformatics/Btr567 |
0.792 |
|
| 2011 |
Kumar S, Dudley JT, Filipski A, Liu L. Phylomedicine: an evolutionary telescope to explore and diagnose the universe of disease mutations. Trends in Genetics : Tig. 27: 377-86. PMID 21764165 DOI: 10.1016/J.Tig.2011.06.004 |
0.721 |
|
| 2011 |
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution. 28: 2731-9. PMID 21546353 DOI: 10.1093/Molbev/Msr121 |
0.586 |
|
| 2011 |
Battistuzzi FU, Billing-Ross P, Paliwal A, Kumar S. Fast and slow implementations of relaxed-clock methods show similar patterns of accuracy in estimating divergence times. Molecular Biology and Evolution. 28: 2439-42. PMID 21498604 DOI: 10.1093/molbev/msr100 |
0.723 |
|
| 2011 |
Pacheco MA, Battistuzzi FU, Lentino M, Aguilar RF, Kumar S, Escalante AA. Evolution of modern birds revealed by mitogenomics: timing the radiation and origin of major orders. Molecular Biology and Evolution. 28: 1927-42. PMID 21242529 DOI: 10.1093/Molbev/Msr014 |
0.759 |
|
| 2010 |
Stone AC, Battistuzzi FU, Kubatko LS, Perry GH, Trudeau E, Lin H, Kumar S. More reliable estimates of divergence times in Pan using complete mtDNA sequences and accounting for population structure. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 365: 3277-88. PMID 20855302 DOI: 10.1098/Rstb.2010.0096 |
0.722 |
|
| 2010 |
Battistuzzi FU, Filipski A, Hedges SB, Kumar S. Performance of relaxed-clock methods in estimating evolutionary divergence times and their credibility intervals. Molecular Biology and Evolution. 27: 1289-300. PMID 20093431 DOI: 10.1093/Molbev/Msq014 |
0.794 |
|
| 2009 |
Marco A, Konikoff C, Karr TL, Kumar S. Relationship between gene co-expression and sharing of transcription factor binding sites in Drosophila melanogaster. Bioinformatics (Oxford, England). 25: 2473-7. PMID 19633094 DOI: 10.1093/Bioinformatics/Btp462 |
0.786 |
|
| 2009 |
Kumar S, Suleski MP, Markov GJ, Lawrence S, Marco A, Filipski AJ. Positional conservation and amino acids shape the correct diagnosis and population frequencies of benign and damaging personal amino acid mutations. Genome Research. 19: 1562-9. PMID 19546171 DOI: 10.1101/Gr.091991.109 |
0.763 |
|
| 2009 |
Horiike T, Miyata D, Hamada K, Saruhashi S, Shinozawa T, Kumar S, Chakraborty R, Komiyama T, Tateno Y. Phylogenetic construction of 17 bacterial phyla by new method and carefully selected orthologs. Gene. 429: 59-64. PMID 19000750 DOI: 10.1016/j.gene.2008.10.006 |
0.3 |
|
| 2008 |
Ji S, Sun L, Jin R, Kumar S, Ye J. Automated annotation of Drosophila gene expression patterns using a controlled vocabulary. Bioinformatics (Oxford, England). 24: 1881-8. PMID 18632750 DOI: 10.1093/Bioinformatics/Btn347 |
0.308 |
|
| 2008 |
Kumar S, Nei M, Dudley J, Tamura K. MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. Briefings in Bioinformatics. 9: 299-306. PMID 18417537 DOI: 10.1093/Bib/Bbn017 |
0.573 |
|
| 2007 |
Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, ... ... Kumar S, et al. Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450: 203-18. PMID 17994087 DOI: 10.1038/Nature06341 |
0.791 |
|
| 2007 |
Tamura K, Dudley J, Nei M, Kumar S. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Molecular Biology and Evolution. 24: 1596-9. PMID 17488738 DOI: 10.1093/molbev/msm092 |
0.588 |
|
| 2007 |
Kumar S, Dudley J. Bioinformatics software for biologists in the genomics era Bioinformatics. 23: 1713-1717. PMID 17485425 DOI: 10.1093/Bioinformatics/Btm239 |
0.316 |
|
| 2007 |
Kumar S, Filipski A. Multiple sequence alignment: in pursuit of homologous DNA positions. Genome Research. 17: 127-35. PMID 17272647 DOI: 10.1101/Gr.5232407 |
0.719 |
|
| 2005 |
Kumar S, Filipski A, Swarna V, Walker A, Hedges SB. Placing confidence limits on the molecular age of the human-chimpanzee divergence. Proceedings of the National Academy of Sciences of the United States of America. 102: 18842-7. PMID 16365310 DOI: 10.1073/Pnas.0509585102 |
0.714 |
|
| 2005 |
Gadagkar SR, Rosenberg MS, Kumar S. Inferring species phylogenies from multiple genes: concatenated sequence tree versus consensus gene tree. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. 304: 64-74. PMID 15593277 DOI: 10.1002/Jez.B.21026 |
0.591 |
|
| 2004 |
Gurunathan R, Van Emden B, Panchanathan S, Kumar S. Identifying spatially similar gene expression patterns in early stage fruit fly embryo images: binary feature versus invariant moment digital representations. Bmc Bioinformatics. 5: 202. PMID 15603586 DOI: 10.1186/1471-2105-5-202 |
0.754 |
|
| 2004 |
Subramanian S, Kumar S. Gene expression intensity shapes evolutionary rates of the proteins encoded by the vertebrate genome Genetics. 168: 373-381. PMID 15454550 DOI: 10.1534/Genetics.104.028944 |
0.327 |
|
| 2004 |
Kumar S, Tamura K, Nei M. MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Briefings in Bioinformatics. 5: 150-63. PMID 15260895 DOI: 10.1093/Bib/5.2.150 |
0.595 |
|
| 2004 |
Tamura K, Nei M, Kumar S. Prospects for inferring very large phylogenies by using the neighbor-joining method. Proceedings of the National Academy of Sciences of the United States of America. 101: 11030-5. PMID 15258291 DOI: 10.1073/pnas.0404206101 |
0.575 |
|
| 2004 |
Tamura K, Subramanian S, Kumar S. Temporal Patterns of Fruit Fly (Drosophila) Evolution Revealed by Mutation Clocks Molecular Biology and Evolution. 21: 36-44. PMID 12949132 DOI: 10.1093/Molbev/Msg236 |
0.329 |
|
| 2003 |
Rosenberg MS, Subramanian S, Kumar S. Patterns of transitional mutation biases within and among mammalian genomes. Molecular Biology and Evolution. 20: 988-93. PMID 12716982 DOI: 10.1093/Molbev/Msg113 |
0.553 |
|
| 2003 |
Blair Hedges S, Kumar S. Genomic clocks and evolutionary timescales. Trends in Genetics : Tig. 19: 200-6. PMID 12683973 DOI: 10.1016/S0168-9525(03)00053-2 |
0.363 |
|
| 2003 |
Rosenberg MS, Kumar S. Heterogeneity of nucleotide frequencies among evolutionary lineages and phylogenetic inference. Molecular Biology and Evolution. 20: 610-21. PMID 12679548 DOI: 10.1093/Molbev/Msg067 |
0.539 |
|
| 2003 |
Rosenberg MS, Kumar S. Taxon sampling, bioinformatics, and phylogenomics. Systematic Biology. 52: 119-24. PMID 12554445 DOI: 10.1080/10635150390132894 |
0.535 |
|
| 2003 |
Tamura K, Kumar S. Evolutionary distance estimation under heterogeneous substitution pattern among lineages. Molecular Biology and Evolution. 19: 1727-36. PMID 12270899 DOI: 10.1093/OXFORDJOURNALS.MOLBEV.A003995 |
0.325 |
|
| 2002 |
Kumar S, Jayaraman K, Panchanathan S, Gurunathan R, Marti-Subirana A, Newfeld SJ. BEST: a novel computational approach for comparing gene expression patterns from early stages of Drosophila melanogaster development. Genetics. 162: 2037-47. PMID 12524369 |
0.764 |
|
| 2002 |
Jiang Z, Melville JS, Cao H, Kumar S, Filipski A, Gibbins AM. Measuring conservation of contiguous sets of autosomal markers on bovine and porcine genomes in relation to the map of the human genome. Genome / National Research Council Canada = GéNome / Conseil National De Recherches Canada. 45: 769-76. PMID 12175081 DOI: 10.1139/G02-038 |
0.702 |
|
| 2001 |
Rosenberg MS, Kumar S. Incomplete taxon sampling is not a problem for phylogenetic inference. Proceedings of the National Academy of Sciences of the United States of America. 98: 10751-6. PMID 11526218 DOI: 10.1073/Pnas.191248498 |
0.552 |
|
| 2001 |
Rosenberg MS, Kumar S. Traditional phylogenetic reconstruction methods reconstruct shallow and deep evolutionary relationships equally well. Molecular Biology and Evolution. 18: 1823-7. PMID 11504861 DOI: 10.1093/Oxfordjournals.Molbev.A003969 |
0.454 |
|
| 1998 |
Nei M, Kumar S, Takahashi K. The optimization principle in phylogenetic analysis tends to give incorrect topologies when the number of nucleotides or amino acids used is small. Proceedings of the National Academy of Sciences of the United States of America. 95: 12390-7. PMID 9770497 DOI: 10.1073/pnas.95.21.12390 |
0.503 |
|
| 1997 |
Zhang J, Kumar S, Nei M. Small-sample tests of episodic adaptive evolution: a case study of primate lysozymes. Molecular Biology and Evolution. 14: 1335-8. PMID 9402743 DOI: 10.1093/Oxfordjournals.Molbev.A025743 |
0.543 |
|
| 1997 |
Zhang J, Kumar S. Detection of convergent and parallel evolution at the amino acid sequence level. Molecular Biology and Evolution. 14: 527-36. PMID 9159930 DOI: 10.1093/OXFORDJOURNALS.MOLBEV.A025789 |
0.466 |
|
| 1995 |
Rzhetsky A, Kumar S, Nei M. Four-cluster analysis: a simple method to test phylogenetic hypotheses. Molecular Biology and Evolution. 12: 163-7. PMID 7877491 DOI: 10.1093/OXFORDJOURNALS.MOLBEV.A040185 |
0.463 |
|
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