Mladen Alan Velimir Vouk - Publications

Affiliations: 
North Carolina State University, Raleigh, NC 
Area:
Computer Science, Biochemistry
Website:
https://www.csc.ncsu.edu/people/vouk

40 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Jararweh Y, Al-Ayyoub M, Darabseh A, Benkhelifa E, Vouk M, Rindos A. Software defined cloud: Survey, system and evaluation Future Generation Computer Systems. 58: 56-74. DOI: 10.1016/J.Future.2015.10.015  0.312
2014 Vu SK, Belloti AA, Gabriel CJ, Brochu HN, Miller ES, Bitzer DL, Vouk MA. Modeling ribosome dynamics to optimize heterologous protein production in escherichia coli 2014 Ieee Global Conference On Signal and Information Processing, Globalsip 2014. 1422-1425. DOI: 10.1109/GlobalSIP.2014.7032363  0.669
2012 Lobo R, Bitzer DL, Vouk MA. Locally invertible multidimensional convolutional encoders Ieee Transactions On Information Theory. 58: 1774-1782. DOI: 10.1109/Tit.2011.2178129  0.699
2011 Nagappan M, Peeler A, Vouk M. Modeling cloud failure data: A case study of the virtual computing lab Proceedings - International Conference On Software Engineering. 8-14. DOI: 10.1145/1985500.1985503  0.625
2011 Nagappan M, Murphy B, Vouk M. Which code construct metrics are symptoms of post release failures Proceedings - International Conference On Software Engineering. 65-68. DOI: 10.1145/1985374.1985389  0.647
2010 Nagappan M, Vouk MA. Abstracting log lines to log event types for mining software system logs Proceedings - International Conference On Software Engineering. 114-117. DOI: 10.1109/MSR.2010.5463281  0.632
2010 Anbalagan P, Vouk M. Towards a Bayesian approach in modeling the disclosure of unique security faults in open source projects Proceedings - International Symposium On Software Reliability Engineering, Issre. 101-110. DOI: 10.1109/ISSRE.2010.48  0.627
2009 Xing C, Bitzer DL, Alexander WE, Vouk MA, Stomp AM. Identification of protein-coding sequences using the hybridization of 18S rRNA and mRNA during translation. Nucleic Acids Research. 37: 591-601. PMID 19073698 DOI: 10.1093/Nar/Gkn917  0.717
2009 Anbalagan P, Vouk M. On mining data across software repositories Proceedings of the 2009 6th Ieee International Working Conference On Mining Software Repositories, Msr 2009. 171-174. DOI: 10.1109/MSR.2009.5069498  0.652
2009 Nagappan M, Wu K, Vouk MA. Efficiently extracting operational profiles from execution logs using suffix arrays Proceedings - International Symposium On Software Reliability Engineering, Issre. 41-50. DOI: 10.1109/ISSRE.2009.23  0.641
2009 Anbalagan P, Vouk M. On predicting the time taken to correct bug reports in open source projects Ieee International Conference On Software Maintenance, Icsm. 523-526. DOI: 10.1109/ICSM.2009.5306337  0.634
2009 Anbalagan P, Vouk M. An empirical study of security problem reports in Linux distributions 2009 3rd International Symposium On Empirical Software Engineering and Measurement, Esem 2009. 481-484. DOI: 10.1109/ESEM.2009.5315985  0.63
2008 Anbalagan P, Vouk M. On reliability analysis of open source software - FEDORA Proceedings - International Symposium On Software Reliability Engineering, Issre. 325-326. DOI: 10.1109/ISSRE.2008.53  0.663
2008 Nagappan M, Vouk MA, Wu K, Sim A, Shoshani A. Efficient operational profiling of systems using suffix arrays on execution logs Proceedings - International Symposium On Software Reliability Engineering, Issre. 313-314. DOI: 10.1109/ISSRE.2008.45  0.62
2008 Chang CS, Klasky S, Cummings J, Samtaney R, Shoshani A, Sugiyama L, Keyes D, Ku S, Park G, Parker S, Podhorszki N, Strauss H, Abbasi H, Adams M, Barreto R, ... ... Vouk M, et al. Toward a first-principles integrated simulation of tokamak edge plasmas Journal of Physics: Conference Series. 125. DOI: 10.1088/1742-6596/125/1/012042  0.633
2008 Nagappan M, Vouk MA. A model for sharing of confidential provenance information in a query based system Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 5272: 62-69.  0.619
2006 Ponnala L, Stomp AM, Bitzer DL, Vouk MA. Analysis of free energy signals arising from nucleotide hybridization between rRNA and mRNA sequences during translation in eubacteria. Eurasip Journal On Bioinformatics & Systems Biology. 23613. PMID 18427589 DOI: 10.1155/Bsb/2006/23613  0.706
2006 Xing C, Bitzer DL, Alexander WE, Stomp AM, Vouk MA. Free energy analysis on the coding region of the individual genes of Saccharomyces cerevisiae. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 1: 4225-8. PMID 17947071 DOI: 10.1109/IEMBS.2006.259972  0.696
2006 Ponnala L, Bitzer DL, Stomp A, Vouk MA. A computational model for reading frame maintenance. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 1: 4540-3. PMID 17946637 DOI: 10.1109/IEMBS.2006.259717  0.706
2006 Starmer J, Stomp A, Vouk M, Bitzer D. Predicting Shine-Dalgarno sequence locations exposes genome annotation errors Plos Computational Biology. 2: 454-466. PMID 16710451 DOI: 10.1371/Journal.Pcbi.0020057  0.669
2006 May EE, Vouk MA, Bitzer DL. Classification of Escherichia coli K-12 ribosome binding sites. An error-control coding model. Ieee Engineering in Medicine and Biology Magazine : the Quarterly Magazine of the Engineering in Medicine & Biology Society. 25: 90-7. PMID 16485396 DOI: 10.1109/Memb.2006.1578668  0.696
2006 Ponnala L, Stomp A, Bitzer DL, Vouk MA. Statistical significance and biological relevance of a sinusoidal pattern detected in translational free energy signals 2006 Ieee International Workshop On Genomic Signal Processing and Statistics, Gensips 2006. 55-56. DOI: 10.1109/GENSIPS.2006.353153  0.697
2006 Oothongsap P, Viniotis Y, Vouk M. Theoretical analysis of the SABUL congestion control algorithm Telecommunication Systems. 31: 115-139. DOI: 10.1007/S11235-006-6516-8  0.738
2006 Lobo RG, Bitzer DL, Vouk MA. Locally invertible multivariate polynomial matrices Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 3969: 427-441.  0.648
2005 Bell KZ, Vouk MA. On effectiveness of pairwise methodology for testing network-centric software Iti 3rd International Conference On Information and Communications Technology, Icict 2005 - Enabling Technologies For the New Knowledge Society. 2005: 221-235. DOI: 10.1109/ITICT.2005.1609626  0.668
2004 Mishra M, Vu SK, Bitzer DL, Vouk MA. Free energy periodicity in prokaryotic coding and its role in identification of +1 ribosomal frameshifting in the Escherichia Coli K-12 gene prfb. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 4: 2848-51. PMID 17270871 DOI: 10.1109/IEMBS.2004.1403812  0.705
2004 Ponnala L, Barnes TM, Bitzer DL, Vouk M. The search for the optimal ribosome 3' tail end in E. coli. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 4: 2824-7. PMID 17270865 DOI: 10.1109/IEMBS.2004.1403806  0.676
2004 May EE, Vouk MA, Bitzer DL, Rosnick DI. Coding theory based models for protein translation initiation in prokaryotic organisms. Bio Systems. 76: 249-60. PMID 15351148 DOI: 10.1016/J.Biosystems.2004.05.017  0.71
2004 May EE, Vouk MA, Bitzer DL, Rosnick DI. An error-correcting code framework for genetic sequence analysis Journal of the Franklin Institute. 341: 89-109. DOI: 10.1016/J.Jfranklin.2003.12.009  0.691
2004 Ponnala L, Barnes TM, Bitzer DL, Vouk MA. Ribosome tail ends as "signal detectors" for protein production in prokaryotes Technology For Life: North Carolina Symposium On Biotechnology and Bioinformatics - 2004 Proceedings. 15-23.  0.674
2004 Xing C, Mishra M, Vu SK, Alexander WE, Bitzer DL, Vouk MA. Free energy based analysis of the coding region of Saccharomyces cerevisiae Technology For Life: North Carolina Symposium On Biotechnology and Bioinformatics - 2004 Proceedings. 25-27.  0.692
2003 May EE, Vouk MA, Bitzer DL, Rosnick DI. Binding motif based code models for prokaryotic translation initiation Proceedings of the Ieee/Embs Region 8 International Conference On Information Technology Applications in Biomedicine, Itab. 2003: 5-8. DOI: 10.1109/ITAB.2003.1222399  0.693
2003 Ponnala L, Bitzer DL, Vouk MA. On finding convolutional code generators for translation initiation of Escherichia Coli K-12 Annual International Conference of the Ieee Engineering in Medicine and Biology - Proceedings. 4: 3854-3857.  0.709
2002 May EE, Vouk MA, Bitzer DL, Rosnick DI. Constructing optimal convolutional code models for prokaryotic translation initiation Annual International Conference of the Ieee Engineering in Medicine and Biology - Proceedings. 3: 2188-2189.  0.707
2000 Rosnick DI, Bitzer DL, Vouk MA, May EE. Free energy periodicity in E.coli coding Annual International Conference of the Ieee Engineering in Medicine and Biology - Proceedings. 4: 2470-2473.  0.705
2000 May EE, Vouk MA, Bitzer DL, Rosnick DI. The ribosome as a table-driven convolutional decoder for the Escherichia coli K-12 translation initiation system Annual International Conference of the Ieee Engineering in Medicine and Biology - Proceedings. 4: 2466-2469.  0.658
1999 Vouk MA, Bitzer DL, Klevans RL. Workflow and end-user quality of service issues in Web-based education Ieee Transactions On Knowledge and Data Engineering. 11: 673-687. DOI: 10.1109/69.790839  0.637
1997 Koorapaty H, Dholakia A, Bitzer DL, Vouk MA. Determination of inverses and syndrome formers for 2-D convolutional encoders Ieee International Symposium On Information Theory - Proceedings. 288. DOI: 10.1109/ISIT.1997.613209  0.628
1995 Dholakia A, Vouk MA, Bitzer DL. Table Based Decoding of Rate One-Half Convolutional Codes Ieee Transactions On Communications. 43: 681-686. DOI: 10.1109/26.380090  0.694
1994 Bitzer DL, Dholakia A, Koorapaty H, Vouk MA. Locally invertible rate-1/n convolutional encoders Ieee International Symposium On Information Theory - Proceedings. 19. DOI: 10.1109/ISIT.1994.394952  0.643
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