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Jessica M. Oakes, Ph.D. - Publications

Affiliations: 
2013 Engineering Sciences (Mechanical Engineering) University of California, San Diego, La Jolla, CA 
Area:
Mechanical Engineering, Radiology, Physiology Biology
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20 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Poorbahrami K, Vignon-Clementel IE, Shadden SC, Oakes JM. A whole lung in silico model to estimate age dependent particle dosimetry. Scientific Reports. 11: 11180. PMID 34045500 DOI: 10.1038/s41598-021-90509-8  0.34
2020 Stevens Boster K, Dong M, Oakes J, Bellini C, Rayz V, LaDisa J, Parker D, Wilson N, Shadden SC, Marsden A, Goergen C. Integrated Image-Based Computational Fluid Dynamics Modeling Software as an Instructional Tool. Journal of Biomechanical Engineering. PMID 32529203 DOI: 10.1115/1.4047479  0.483
2020 Farra YM, Eden MJ, Coleman JR, Kulkarni P, Ferris CF, Oakes JM, Bellini C. Acute neuroradiological, behavioral, and physiological effects of nose-only exposure to vaporized cannabis in C57BL/6 mice. Inhalation Toxicology. 1-18. PMID 32475185 DOI: 10.1080/08958378.2020.1767237  0.314
2020 Farghadan A, Poorbahrami K, Jalal S, Oakes JM, Coletti F, Arzani A. Particle transport and deposition correlation with near-wall flow characteristic under inspiratory airflow in lung airways. Computers in Biology and Medicine. 120: 103703. PMID 32217283 DOI: 10.1016/J.Compbiomed.2020.103703  0.472
2019 Oakes JM, Shadden SC. Response to the Letter to the Editor "Airflow Simulation in Pulmonary Conducting Airways" by M. Monjezi and H. Jamaati. Annals of Biomedical Engineering. PMID 31650298 DOI: 10.1007/S10439-019-02385-Z  0.312
2019 Poorbahrami K, Mummy DG, Fain SB, Oakes JM. Patient-Specific Modeling of Aerosol Delivery in Healthy and Asthmatic Adults. Journal of Applied Physiology (Bethesda, Md. : 1985). PMID 31513445 DOI: 10.1152/Japplphysiol.00221.2019  0.461
2018 Oakes JM, Mummy D, Poorbahrami K, Zha W, Fain SB. Patient-Specific Computational Simulations of Hyperpolarized 3He MRI Ventilation Defects in Healthy and Asthmatic Subjects. Ieee Transactions On Bio-Medical Engineering. PMID 30281426 DOI: 10.1109/Tbme.2018.2872845  0.342
2018 Poorbahrami K, Oakes JM. Regional flow and deposition variability in adult female lungs: A numerical simulation pilot study. Clinical Biomechanics (Bristol, Avon). PMID 29395490 DOI: 10.1016/J.Clinbiomech.2017.12.014  0.457
2017 Oakes JM, Roth SC, Shadden SC. Airflow Simulations in Infant, Child, and Adult Pulmonary Conducting Airways. Annals of Biomedical Engineering. PMID 29264667 DOI: 10.1007/S10439-017-1971-9  0.339
2016 Oakes JM, Shadden SC, Grandmont C, Vignon-Clementel IE. Aerosol Transport Throughout Inspiration and Expiration in the Pulmonary Airways. International Journal For Numerical Methods in Biomedical Engineering. PMID 27860424 DOI: 10.1002/Cnm.2847  0.502
2015 Oakes JM, Hofemeier P, Vignon-Clementel IE, Sznitman J. Aerosols in healthy and emphysematous in silico pulmonary acinar rat models. Journal of Biomechanics. PMID 26726781 DOI: 10.1016/J.Jbiomech.2015.11.026  0.529
2015 Oakes JM, Marsden AL, Grandmont C, Darquenne C, Vignon-Clementel IE. Distribution of aerosolized particles in healthy and emphysematous rat lungs: comparison between experimental and numerical studies. Journal of Biomechanics. 48: 1147-57. PMID 25682537 DOI: 10.1016/J.Jbiomech.2015.01.004  0.633
2014 Darquenne C, Borja MG, Oakes JM, Breen EC, Olfert IM, Scadeng M, Prisk GK. Increase in relative deposition of fine particles in the rat lung periphery in the absence of gravity. Journal of Applied Physiology (Bethesda, Md. : 1985). 117: 880-6. PMID 25170069 DOI: 10.1152/Japplphysiol.00298.2014  0.47
2014 Oakes JM, Breen EC, Scadeng M, Tchantchou GS, Darquenne C. MRI-based measurements of aerosol deposition in the lung of healthy and elastase-treated rats. Journal of Applied Physiology (Bethesda, Md. : 1985). 116: 1561-8. PMID 24790020 DOI: 10.1152/Japplphysiol.01165.2013  0.529
2014 Oakes JM, Marsden AL, Grandmont C, Shadden SC, Darquenne C, Vignon-Clementel IE. Airflow and particle deposition simulations in health and emphysema: from in vivo to in silico animal experiments. Annals of Biomedical Engineering. 42: 899-914. PMID 24318192 DOI: 10.1007/S10439-013-0954-8  0.62
2013 Oakes JM, Scadeng M, Breen EC, Prisk GK, Darquenne C. Regional distribution of aerosol deposition in rat lungs using magnetic resonance imaging. Annals of Biomedical Engineering. 41: 967-78. PMID 23354670 DOI: 10.1007/S10439-013-0745-2  0.479
2012 Oakes JM, Scadeng M, Breen EC, Marsden AL, Darquenne C. Rat airway morphometry measured from in situ MRI-based geometric models. Journal of Applied Physiology (Bethesda, Md. : 1985). 112: 1921-31. PMID 22461437 DOI: 10.1152/Japplphysiol.00018.2012  0.608
2012 Oakes JM, Marsden AL, Grandmont C, Darquenne C, Vignon-Clementel IE. Multiscale model of airflow in healthy and emphysema rat lungs Asme 2012 Summer Bioengineering Conference, Sbc 2012. 1263-1264. DOI: 10.1115/SBC2012-80418  0.562
2010 Oakes JM, Day S, Weinstein SJ, Robinson RJ. Flow field analysis in expanding healthy and emphysematous alveolar models using particle image velocimetry. Journal of Biomechanical Engineering. 132: 021008. PMID 20370245 DOI: 10.1115/1.4000870  0.477
2010 Oakes JM, Marsden AL, Scadeng M, Darquenne C. Image-based morphometry and airflow simulation in rat lungs Asme 2010 Summer Bioengineering Conference, Sbc 2010. 655-656. DOI: 10.1115/SBC2010-19561  0.558
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