Axel Nimmerjahn, Ph.D. - Publications

Waitt Advanced Biophotonics Center Salk Institute for Biological Studies, La Jolla, CA, United States 
Cerebellum, neocortex, astrocytes, microglia

27 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Patriarchi T, Cho JR, Merten K, Marley A, Broussard GJ, Liang R, Williams J, Nimmerjahn A, von Zastrow M, Gradinaru V, Tian L. Imaging neuromodulators with high spatiotemporal resolution using genetically encoded indicators. Nature Protocols. PMID 31732722 DOI: 10.1038/S41596-019-0239-2  0.39
2018 Patriarchi T, Cho JR, Merten K, Howe MW, Marley A, Xiong WH, Folk RW, Broussard GJ, Liang R, Jang MJ, Zhong H, Dombeck D, von Zastrow M, Nimmerjahn A, Gradinaru V, et al. Ultrafast neuronal imaging of dopamine dynamics with designed genetically encoded sensors. Science (New York, N.Y.). PMID 29853555 DOI: 10.1126/Science.Aat4422  0.344
2017 Tufail Y, Cook D, Fourgeaud L, Powers CJ, Merten K, Clark CL, Hoffman E, Ngo A, Sekiguchi KJ, O'Shea CC, Lemke G, Nimmerjahn A. Phosphatidylserine Exposure Controls Viral Innate Immune Responses by Microglia. Neuron. PMID 28111081 DOI: 10.1016/J.Neuron.2016.12.021  0.336
2016 Sekiguchi KJ, Shekhtmeyster P, Merten K, Arena A, Cook D, Hoffman E, Ngo A, Nimmerjahn A. Imaging large-scale cellular activity in spinal cord of freely behaving mice. Nature Communications. 7: 11450. PMID 27121084 DOI: 10.1038/Ncomms11450  0.342
2016 Fourgeaud L, Través PG, Tufail Y, Leal-Bailey H, Lew ED, Burrola PG, Callaway P, Zagórska A, Rothlin CV, Nimmerjahn A, Lemke G. TAM receptors regulate multiple features of microglial physiology. Nature. PMID 27049947 DOI: 10.1038/Nature17630  0.353
2015 Nimmerjahn A, Bergles DE. Large-scale recording of astrocyte activity. Current Opinion in Neurobiology. 32: 95-106. PMID 25665733 DOI: 10.1016/J.Conb.2015.01.015  0.367
2014 Knowland D, Arac A, Sekiguchi KJ, Hsu M, Lutz SE, Perrino J, Steinberg GK, Barres BA, Nimmerjahn A, Agalliu D. Stepwise recruitment of transcellular and paracellular pathways underlies blood-brain barrier breakdown in stroke. Neuron. 82: 603-17. PMID 24746419 DOI: 10.1016/J.Neuron.2014.03.003  0.7
2013 Devor A, Bandettini PA, Boas DA, Bower JM, Buxton RB, Cohen LB, Dale AM, Einevoll GT, Fox PT, Franceschini MA, Friston KJ, Fujimoto JG, Geyer MA, Greenberg JH, Halgren E, ... ... Nimmerjahn A, et al. The challenge of connecting the dots in the B.R.A.I.N. Neuron. 80: 270-4. PMID 24139032 DOI: 10.1016/J.Neuron.2013.09.008  0.732
2012 Nimmerjahn A. Two-photon imaging of microglia in the mouse cortex in vivo. Cold Spring Harbor Protocols. 2012. PMID 22550299 DOI: 10.1101/Pdb.Prot069294  0.481
2012 Nimmerjahn A. Optical window preparation for two-photon imaging of microglia in mice. Cold Spring Harbor Protocols. 2012. PMID 22550298 DOI: 10.1101/Pdb.Prot069286  0.479
2012 Nimmerjahn A. Surgical implantation of a head plate in mice in preparation for in vivo two-photon imaging of microglia. Cold Spring Harbor Protocols. 2012. PMID 22550297 DOI: 10.1101/Pdb.Prot069278  0.458
2012 Nimmerjahn A, Helmchen F. In vivo labeling of cortical astrocytes with sulforhodamine 101 (SR101). Cold Spring Harbor Protocols. 2012: 326-34. PMID 22383644 DOI: 10.1101/Pdb.Prot068155  0.715
2012 Kerr JN, Nimmerjahn A. Functional imaging in freely moving animals. Current Opinion in Neurobiology. 22: 45-53. PMID 22237048 DOI: 10.1016/J.Conb.2011.12.002  0.728
2011 Tremblay MÈ, Stevens B, Sierra A, Wake H, Bessis A, Nimmerjahn A. The role of microglia in the healthy brain. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 16064-9. PMID 22072657 DOI: 10.1523/Jneurosci.4158-11.2011  0.565
2011 Ghosh KK, Burns LD, Cocker ED, Nimmerjahn A, Ziv Y, Gamal AE, Schnitzer MJ. Miniaturized integration of a fluorescence microscope. Nature Methods. 8: 871-8. PMID 21909102 DOI: 10.1038/Nmeth.1694  0.598
2009 Mukamel EA, Nimmerjahn A, Schnitzer MJ. Automated analysis of cellular signals from large-scale calcium imaging data. Neuron. 63: 747-60. PMID 19778505 DOI: 10.1016/J.Neuron.2009.08.009  0.719
2009 Nimmerjahn A, Mukamel EA, Schnitzer MJ. Motor behavior activates Bergmann glial networks. Neuron. 62: 400-12. PMID 19447095 DOI: 10.1016/J.Neuron.2009.03.019  0.711
2009 Nimmerjahn A. Astrocytes going live: advances and challenges. The Journal of Physiology. 587: 1639-47. PMID 19204050 DOI: 10.1113/Jphysiol.2008.167171  0.387
2008 Flusberg BA, Nimmerjahn A, Cocker ED, Mukamel EA, Barretto RP, Ko TH, Burns LD, Jung JC, Schnitzer MJ. High-speed, miniaturized fluorescence microscopy in freely moving mice. Nature Methods. 5: 935-8. PMID 18836457 DOI: 10.1038/Nmeth.1256  0.74
2005 Sullivan MR, Nimmerjahn A, Sarkisov DV, Helmchen F, Wang SS. In vivo calcium imaging of circuit activity in cerebellar cortex. Journal of Neurophysiology. 94: 1636-44. PMID 16079125 DOI: 10.1152/Jn.01013.2004  0.699
2005 Nimmerjahn A, Kirchhoff F, Helmchen F. Resting microglial cells are highly dynamic surveillants of brain parenchyma in vivo. Science (New York, N.Y.). 308: 1314-8. PMID 15831717 DOI: 10.1515/Nf-2005-0304  0.733
2004 Nimmerjahn A, Kirchhoff F, Kerr JN, Helmchen F. Sulforhodamine 101 as a specific marker of astroglia in the neocortex in vivo. Nature Methods. 1: 31-7. PMID 15782150 DOI: 10.1038/Nmeth706  0.768
2004 Dittgen T, Nimmerjahn A, Komai S, Licznerski P, Waters J, Margrie TW, Helmchen F, Denk W, Brecht M, Osten P. Lentivirus-based genetic manipulations of cortical neurons and their optical and electrophysiological monitoring in vivo. Proceedings of the National Academy of Sciences of the United States of America. 101: 18206-11. PMID 15608064 DOI: 10.1073/Pnas.0407976101  0.706
2004 Göbel W, Kerr JN, Nimmerjahn A, Helmchen F. Miniaturized two-photon microscope based on a flexible coherent fiber bundle and a gradient-index lens objective. Optics Letters. 29: 2521-3. PMID 15584281 DOI: 10.1364/Ol.29.002521  0.744
2004 Göbel W, Nimmerjahn A, Helmchen F. Distortion-free delivery of nanojoule femtosecond pulses from a Ti:sapphire laser through a hollow-core photonic crystal fiber. Optics Letters. 29: 1285-7. PMID 15209273 DOI: 10.1364/Ol.29.001285  0.651
2004 Kim J, Dittgen T, Nimmerjahn A, Waters J, Pawlak V, Helmchen F, Schlesinger S, Seeburg PH, Osten P. Sindbis vector SINrep(nsP2S726): a tool for rapid heterologous expression with attenuated cytotoxicity in neurons. Journal of Neuroscience Methods. 133: 81-90. PMID 14757348 DOI: 10.1016/J.Jneumeth.2003.09.029  0.743
2004 Helmchen F, Göbel W, Nimmerjahn A. Fiber-optic two-photon-excited fluorescence microscopy Frontiers in Optics. DOI: 10.1364/Fio.2004.Fwf4  0.672
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