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Ryan Thummel - Publications

Affiliations: 
Anatomy and Cell Biology Wayne State University, Detroit, MI, United States 
Area:
Cell Biology, Human Development
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37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Kramer AC, Gurdziel K, Thummel R. A Comparative Analysis of Gene and Protein Expression Throughout a Full 28-Day Retinal Regeneration Time-Course in Adult Zebrafish. Frontiers in Cell and Developmental Biology. 9: 741514. PMID 34790663 DOI: 10.3389/fcell.2021.741514  0.304
2021 Turkalj B, Quallich D, Bessert DA, Kramer AC, Cook TA, Thummel R. Development and characterization of a chronic photoreceptor degeneration model in adult zebrafish that does not trigger a regenerative response. Experimental Eye Research. 209: 108630. PMID 34029596 DOI: 10.1016/j.exer.2021.108630  0.305
2020 Ang NB, Saera-Vila A, Walsh C, Hitchcock PF, Kahana A, Thummel R, Nagashima M. Midkine-a functions as a universal regulator of proliferation during epimorphic regeneration in adult zebrafish. Plos One. 15: e0232308. PMID 32530962 DOI: 10.1371/Journal.Pone.0232308  0.412
2019 Mei F, Rolain M, Zhou XY, Singh PK, Thummel R, Kumar A. Zebrafish are Resistant to Endophthalmitis. Pathogens (Basel, Switzerland). 8. PMID 31717750 DOI: 10.3390/Pathogens8040207  0.337
2018 Ranski AH, Kramer AC, Morgan GW, Perez JL, Thummel R. Characterization of retinal regeneration in adult zebrafish following multiple rounds of phototoxic lesion. Peerj. 6: e5646. PMID 30258730 DOI: 10.7717/Peerj.5646  0.431
2017 Thomas JL, Morgan GW, Dolinski KM, Thummel R. Characterization of the pleiotropic roles of Sonic Hedgehog during retinal regeneration in adult zebrafish. Experimental Eye Research. PMID 29030175 DOI: 10.1016/J.Exer.2017.10.003  0.485
2017 Thummel R, Iovine MK. Using Morpholinos to Examine Gene Function During Fin Regeneration Methods of Molecular Biology. 1565: 79-85. PMID 28364235 DOI: 10.1007/978-1-4939-6817-6_7  0.348
2017 Rabinowitz JS, Robitaille AM, Wang Y, Ray CA, Thummel R, Gu H, Djukovic D, Raftery D, Berndt JD, Moon RT. Transcriptomic, proteomic, and metabolomic landscape of positional memory in the caudal fin of zebrafish. Proceedings of the National Academy of Sciences of the United States of America. PMID 28096348 DOI: 10.1073/Pnas.1620755114  0.332
2016 Edwards H, Rubenstein M, Dombkowski AA, Caldwell JT, Chu R, Xavier AC, Thummel R, Neely M, Matherly LH, Ge Y, Taub JW. Gene Signature of High White Blood Cell Count in B-Precursor Acute Lymphoblastic Leukemia. Plos One. 11: e0161539. PMID 27536776 DOI: 10.1371/Journal.Pone.0161539  0.316
2015 Taylor SM, Alvarez-Delfin K, Saade CJ, Thomas JL, Thummel R, Fadool JM, Hitchcock PF. The bHLH Transcription Factor NeuroD Governs Photoreceptor Genesis and Regeneration Through Delta-Notch Signaling. Investigative Ophthalmology & Visual Science. 56: 7496-7515. PMID 26580854 DOI: 10.1167/Iovs.15-17616  0.362
2015 Thomas JL, Ranski AH, Morgan GW, Thummel R. Reactive gliosis in the adult zebrafish retina. Experimental Eye Research. 143: 98-109. PMID 26492821 DOI: 10.1016/J.Exer.2015.09.017  0.452
2015 Gramage E, D'Cruz T, Taylor S, Thummel R, Hitchcock PF. Midkine-a protein localization in the developing and adult retina of the zebrafish and its function during photoreceptor regeneration. Plos One. 10: e0121789. PMID 25803551 DOI: 10.1371/Journal.Pone.0121789  0.476
2013 Thomas JL, Thummel R. A novel light damage paradigm for use in retinal regeneration studies in adult zebrafish. Journal of Visualized Experiments : Jove. e51017. PMID 24192580 DOI: 10.3791/51017  0.445
2013 Lenkowski JR, Qin Z, Sifuentes CJ, Thummel R, Soto CM, Moens CB, Raymond PA. Retinal regeneration in adult zebrafish requires regulation of TGFβ signaling. Glia. 61: 1687-97. PMID 23918319 DOI: 10.1002/Glia.22549  0.451
2012 Hyde DR, Godwin AR, Thummel R. In vivo electroporation of morpholinos into the regenerating adult zebrafish tail fin. Journal of Visualized Experiments : Jove. PMID 22491016 DOI: 10.3791/3632  0.429
2012 Thomas JL, Nelson CM, Luo X, Hyde DR, Thummel R. Characterization of multiple light damage paradigms reveals regional differences in photoreceptor loss. Experimental Eye Research. 97: 105-16. PMID 22425727 DOI: 10.1016/J.Exer.2012.02.004  0.376
2012 Thomas JL, Ochocinska MJ, Hitchcock PF, Thummel R. Using the Tg(nrd:egfp)/albino zebrafish line to characterize in vivo expression of neurod. Plos One. 7: e29128. PMID 22235264 DOI: 10.1371/Journal.Pone.0029128  0.436
2011 Thummel R, Bailey TJ, Hyde DR. In vivo electroporation of morpholinos into the adult zebrafish retina. Journal of Visualized Experiments : Jove. e3603. PMID 22231802 DOI: 10.3791/3603  0.464
2011 Qin Z, Kidd AR, Thomas JL, Poss KD, Hyde DR, Raymond PA, Thummel R. FGF signaling regulates rod photoreceptor cell maintenance and regeneration in zebrafish. Experimental Eye Research. 93: 726-34. PMID 21945172 DOI: 10.1016/J.Exer.2011.09.003  0.44
2011 Thomas JL, Vihtelic TS, denDekker AD, Willer G, Luo X, Murphy TR, Gregg RG, Hyde DR, Thummel R. The loss of vacuolar protein sorting 11 (vps11) causes retinal pathogenesis in a vertebrate model of syndromic albinism. Investigative Ophthalmology & Visual Science. 52: 3119-28. PMID 21330665 DOI: 10.1167/Iovs.10-5957  0.391
2011 Thomas JL, Hitchcock P, Thummel R. Characterization of neuroD during zebrafish retinal development and regeneration Developmental Biology. 356: 218-219. DOI: 10.1016/J.Ydbio.2011.05.346  0.396
2010 Thummel R, Enright JM, Kassen SC, Montgomery JE, Bailey TJ, Hyde DR. Pax6a and Pax6b are required at different points in neuronal progenitor cell proliferation during zebrafish photoreceptor regeneration. Experimental Eye Research. 90: 572-82. PMID 20152834 DOI: 10.1016/J.Exer.2010.02.001  0.432
2010 Craig SE, Thummel R, Ahmed H, Vasta GR, Hyde DR, Hitchcock PF. The zebrafish galectin Drgal1-l2 is expressed by proliferating Müller glia and photoreceptor progenitors and regulates the regeneration of rod photoreceptors. Investigative Ophthalmology & Visual Science. 51: 3244-52. PMID 20071673 DOI: 10.1167/Iovs.09-4879  0.425
2009 Kassen SC, Thummel R, Campochiaro LA, Harding MJ, Bennett NA, Hyde DR. CNTF induces photoreceptor neuroprotection and Müller glial cell proliferation through two different signaling pathways in the adult zebrafish retina. Experimental Eye Research. 88: 1051-64. PMID 19450453 DOI: 10.1016/J.Exer.2009.01.007  0.422
2008 Thummel R, Kassen SC, Enright JM, Nelson CM, Montgomery JE, Hyde DR. Characterization of Müller glia and neuronal progenitors during adult zebrafish retinal regeneration. Experimental Eye Research. 87: 433-44. PMID 18718467 DOI: 10.1016/J.Exer.2008.07.009  0.458
2008 Kassen SC, Thummel R, Burket CT, Campochiaro LA, Harding MJ, Hyde DR. The Tg(ccnb1:EGFP) transgenic zebrafish line labels proliferating cells during retinal development and regeneration. Molecular Vision. 14: 951-63. PMID 18509551  0.377
2008 Hoptak-Solga AD, Nielsen S, Jain I, Thummel R, Hyde DR, Iovine MK. Connexin43 (GJA1) is required in the population of dividing cells during fin regeneration. Developmental Biology. 317: 541-8. PMID 18406403 DOI: 10.1016/J.Ydbio.2008.02.051  0.358
2008 Thummel R, Kassen SC, Montgomery JE, Enright JM, Hyde DR. Inhibition of Müller glial cell division blocks regeneration of the light-damaged zebrafish retina. Developmental Neurobiology. 68: 392-408. PMID 18161852 DOI: 10.1002/Dneu.20596  0.467
2008 Burket CT, Montgomery JE, Thummel R, Kassen SC, LaFave MC, Langenau DM, Zon LI, Hyde DR. Generation and characterization of transgenic zebrafish lines using different ubiquitous promoters. Transgenic Research. 17: 265-79. PMID 17968670 DOI: 10.1007/S11248-007-9152-5  0.389
2008 Thummel R, Enright JM, Kassen SC, Montgomery JE, Hyde DR. Pax6 is required for neuronal progenitor cell proliferation during cone cell regeneration Developmental Biology. 319: 557. DOI: 10.1016/J.Ydbio.2008.05.319  0.372
2007 Thummel R, Ju M, Sarras MP, Godwin AR. Both Hoxc13 orthologs are functionally important for zebrafish tail fin regeneration. Development Genes and Evolution. 217: 413-20. PMID 17437127 DOI: 10.1007/S00427-007-0154-3  0.374
2006 Thummel R, Burket CT, Hyde DR. Two different transgenes to study gene silencing and re-expression during zebrafish caudal fin and retinal regeneration. Thescientificworldjournal. 6: 65-81. PMID 17205188 DOI: 10.1100/Tsw.2006.328  0.404
2006 Thummel R, Bai S, Sarras MP, Song P, McDermott J, Brewer J, Perry M, Zhang X, Hyde DR, Godwin AR. Inhibition of zebrafish fin regeneration using in vivo electroporation of morpholinos against fgfr1 and msxb. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 235: 336-46. PMID 16273523 DOI: 10.1002/Dvdy.20630  0.39
2006 Thummel R, Bai S, Sarras MP, Song P, Zhang X, Hyde DR, Godwin R. Inhibition of zebrafish fin regeneration using in vivo electroporation of morpholinos against fgfr1 and msxb Developmental Biology. 295: 356. DOI: 10.1016/J.Ydbio.2006.04.095  0.313
2006 MPS, Thummel R, Godman A. Role of Hox genes in zebrafish caudal fin regeneration Matrix Biology. 25. DOI: 10.1016/J.Matbio.2006.08.071  0.321
2005 Thummel R, Burket CT, Brewer JL, Sarras MP, Li L, Perry M, McDermott JP, Sauer B, Hyde DR, Godwin AR. Cre-mediated site-specific recombination in zebrafish embryos. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 233: 1366-77. PMID 15977183 DOI: 10.1002/dvdy.20475  0.307
2004 Thummel R, Li L, Tanase C, Sarras MP, Godwin AR. Differences in expression pattern and function between zebrafish hoxc13 orthologs: recruitment of Hoxc13b into an early embryonic role. Developmental Biology. 274: 318-33. PMID 15385162 DOI: 10.1016/J.Ydbio.2004.07.018  0.334
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