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Simone Bianco, Ph.D. - Publications

Affiliations: 
2007 University of North Texas, Denton, TX, United States 
Area:
Condensed Matter Physics
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33 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Catching A, Te Yeh M, Bianco S, Capponi S, Andino R. A tradeoff between enterovirus A71 particle stability and cell entry. Nature Communications. 14: 7450. PMID 37978288 DOI: 10.1038/s41467-023-43029-0  0.673
2022 Daniels KG, Wang S, Simic MS, Bhargava HK, Capponi S, Tonai Y, Yu W, Bianco S, Lim WA. Decoding CAR T cell phenotype using combinatorial signaling motif libraries and machine learning. Science (New York, N.Y.). eabq0225. PMID 36480602 DOI: 10.1126/science.abq0225  0.656
2022 Agarwal A, Beck KL, Capponi S, Kunitomi M, Nayar G, Seabolt E, Mahadeshwar G, Bianco S, Mukherjee V, Kaufman JH. Predicting Epitope Candidates for SARS-CoV-2. Viruses. 14. PMID 36016459 DOI: 10.3390/v14081837  0.724
2021 Beck KL, Seabolt E, Agarwal A, Nayar G, Bianco S, Krishnareddy H, Ngo TA, Kunitomi M, Mukherjee V, Kaufman JH. Semi-Supervised Pipeline for Autonomous Annotation of SARS-CoV-2 Genomes. Viruses. 13. PMID 34960694 DOI: 10.3390/v13122426  0.545
2021 Xiao Y, Lidsky PV, Shirogane Y, Aviner R, Wu CT, Li W, Zheng W, Talbot D, Catching A, Doitsh G, Su W, Gekko CE, Nayak A, Ernst JD, Brodsky L, ... ... Bianco S, et al. A defective viral genome strategy elicits broad protective immunity against respiratory viruses. Cell. PMID 34852237 DOI: 10.1016/j.cell.2021.11.023  0.723
2021 Gopalakrishnan V, Pethe S, Kefayati S, Srinivasan R, Hake P, Deshpande A, Liu X, Hoang E, Davila M, Bianco S, Kaufman JH. Globally local: Hyper-local modeling for accurate forecast of COVID-19. Epidemics. 37: 100510. PMID 34688165 DOI: 10.1016/j.epidem.2021.100510  0.522
2021 Capponi S, Wang S, Navarro EJ, Bianco S. AI-driven prediction of SARS-CoV-2 variant binding trends from atomistic simulations. The European Physical Journal. E, Soft Matter. 44: 123. PMID 34613523 DOI: 10.1140/epje/s10189-021-00119-5  0.661
2021 Shirogane Y, Rousseau E, Voznica J, Xiao Y, Su W, Catching A, Whitfield ZJ, Rouzine IM, Bianco S, Andino R. Experimental and mathematical insights on the interactions between poliovirus and a defective interfering genome. Plos Pathogens. 17: e1009277. PMID 34570820 DOI: 10.1371/journal.ppat.1009277  0.751
2021 Catching A, Capponi S, Yeh MT, Bianco S, Andino R. Examining the interplay between face mask usage, asymptomatic transmission, and social distancing on the spread of COVID-19. Scientific Reports. 11: 15998. PMID 34362936 DOI: 10.1038/s41598-021-94960-5  0.649
2020 Yeh MT, Capponi S, Catching A, Bianco S, Andino R. Mapping Attenuation Determinants in Enterovirus-D68. Viruses. 12. PMID 32784424 DOI: 10.3390/V12080867  0.68
2020 Pastore VP, Zimmerman TG, Biswas SK, Bianco S. Annotation-free learning of plankton for classification and anomaly detection. Scientific Reports. 10: 12142. PMID 32699302 DOI: 10.1038/S41598-020-68662-3  0.711
2019 Kaufman JH, Elkins CA, Davis M, Weis AM, Huang BC, Mammel MK, Patel IR, Beck KL, Edlund S, Chambliss D, Douglas J, Bianco S, Kunitomi M, Weimer BC. Insular Microbiogeography: Three Pathogens as Exemplars. Current Issues in Molecular Biology. 36: 89-108. PMID 31596250 DOI: 10.21775/Cimb.036.089  0.591
2019 Douglas JV, Bianco S, Edlund S, Engelhardt T, Filter M, Günther T, Hu KM, Nixon EJ, Sevilla NL, Swaid A, Kaufman JH. STEM: An Open Source Tool for Disease Modeling. Health Security. 17: 291-306. PMID 31433284 DOI: 10.1089/Hs.2019.0018  0.58
2017 Nieddu GT, Billings L, Kaufman JH, Forgoston E, Bianco S. Extinction pathways and outbreak vulnerability in a stochastic Ebola model. Journal of the Royal Society, Interface. 14. PMID 28202592 DOI: 10.1098/Rsif.2016.0847  0.596
2016 Xiao Y, Rouzine IM, Bianco S, Acevedo A, Goldstein EF, Farkov M, Brodsky L, Andino R. RNA Recombination Enhances Adaptability and Is Required for Virus Spread and Virulence. Cell Host & Microbe. 19: 493-503. PMID 27078068 DOI: 10.1016/J.Chom.2016.03.009  0.308
2015 Jones BA, Lessler J, Bianco S, Kaufman JH. Statistical Mechanics and Thermodynamics of Viral Evolution. Plos One. 10: e0137482. PMID 26422205 DOI: 10.1371/Journal.Pone.0137482  0.622
2015 Jones BA, Lessler J, Bianco S, Kaufman JH. Testing for a Thermodynamic Temperature. Plos One. DOI: 10.1371/Journal.Pone.0137482.G011  0.525
2015 Jones BA, Lessler J, Bianco S, Kaufman JH. Eigenstates of the System. Plos One. DOI: 10.1371/Journal.Pone.0137482.G005  0.544
2015 Jones BA, Lessler J, Bianco S, Kaufman JH. Viral Mutation Probabilities. Plos One. DOI: 10.1371/Journal.Pone.0137482.G004  0.567
2014 Stern A, Bianco S, Yeh MT, Wright C, Butcher K, Tang C, Nielsen R, Andino R. Costs and benefits of mutational robustness in RNA viruses. Cell Reports. 8: 1026-36. PMID 25127138 DOI: 10.1016/J.Celrep.2014.07.011  0.455
2013 Li Z, Bianco S, Zhang Z, Tang C. Generic Properties of Random Gene Regulatory Networks. Quantitative Biology. 1: 253-260. PMID 25328770 DOI: 10.1007/S40484-014-0026-6  0.435
2013 Hu K, Thoens C, Bianco S, Edlund S, Davis M, Douglas J, Kaufman JH. The effect of antibody-dependent enhancement, cross immunity, and vector population on the dynamics of dengue fever. Journal of Theoretical Biology. 319: 62-74. PMID 23206388 DOI: 10.1016/J.Jtbi.2012.11.021  0.594
2011 Schwartz IB, Forgoston E, Bianco S, Shaw LB. Converging towards the optimal path to extinction. Journal of the Royal Society, Interface / the Royal Society. 8: 1699-707. PMID 21571943 DOI: 10.1098/Rsif.2011.0159  0.555
2011 Bianco S, Shaw LB. Asymmetry in the presence of migration stabilizes multistrain disease outbreaks. Bulletin of Mathematical Biology. 73: 248-60. PMID 20464521 DOI: 10.1007/S11538-010-9541-4  0.565
2011 Forgoston E, Bianco S, Shaw LB, Schwartz IB. Maximal sensitive dependence and the optimal path to epidemic extinction. Bulletin of Mathematical Biology. 73: 495-514. PMID 20352495 DOI: 10.1007/S11538-010-9537-0  0.551
2009 Bianco S, Shaw LB, Schwartz IB. Epidemics with multistrain interactions: the interplay between cross immunity and antibody-dependent enhancement. Chaos (Woodbury, N.Y.). 19: 043123. PMID 20059219 DOI: 10.1063/1.3270261  0.543
2009 Ignaccolo M, De Michele C, Bianco S. The droplike nature of rain and its invariant statistical properties Journal of Hydrometeorology. 10: 79-95. DOI: 10.1175/2008Jhm975.1  0.627
2008 Paradisi P, Grigolini P, Bianco S, Akin OC. Renewal aging in non-homogeneous poisson processes with periodic rate modulation International Journal of Bifurcation and Chaos. 18: 2681-2691. DOI: 10.1142/S0218127408021890  0.504
2008 Bianco S, Geneston E, Grigolini P, Ignaccolo M. Renewal aging as emerging property of phase synchronization Physica a: Statistical Mechanics and Its Applications. 387: 1387-1392. DOI: 10.1016/J.Physa.2007.10.045  0.685
2007 Bianco S, Ignaccolo M, Rider MS, Ross MJ, Winsor P, Grigolini P. Brain, music, and non-Poisson renewal processes. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 75: 061911. PMID 17677304 DOI: 10.1103/Physreve.75.061911  0.681
2007 Bianco S, Grigolini P, Paradisi P. A fluctuating environment as a source of periodic modulation Chemical Physics Letters. 438: 336-340. DOI: 10.1016/J.Cplett.2007.03.013  0.474
2007 Bianco S, Grigolini P. Aging in financial market Chaos, Solitons and Fractals. 34: 41-50. DOI: 10.1016/J.Chaos.2007.01.048  0.469
2005 Bianco S, Grigolini P, Paradisi P. Fluorescence intermittency in blinking quantum dots: renewal or slow modulation? The Journal of Chemical Physics. 123: 174704. PMID 16375554 DOI: 10.1063/1.2102903  0.474
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