Enzo Marinari - Publications

Affiliations: 
Università degli Studi di Roma La Sapienza, Roma, Lazio, Italy 
Area:
Physics

22/25 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Miotto M, Marinari E, De Martino A. Competing endogenous RNA crosstalk at system level. Plos Computational Biology. 15: e1007474. PMID 31675359 DOI: 10.1371/journal.pcbi.1007474  1
2019 Baity-Jesi M, Calore E, Cruz A, Fernandez LA, Gil-Narvión JM, Gordillo-Guerrero A, Iñiguez D, Lasanta A, Maiorano A, Marinari E, Martin-Mayor V, Moreno-Gordo J, Muñoz Sudupe A, Navarro D, Parisi G, et al. The Mpemba effect in spin glasses is a persistent memory effect. Proceedings of the National Academy of Sciences of the United States of America. PMID 31311870 DOI: 10.1073/Pnas.1819803116  1
2019 Mori M, Marinari E, De Martino A. A yield-cost tradeoff governs s decision between fermentation and respiration in carbon-limited growth. Npj Systems Biology and Applications. 5: 16. PMID 31069113 DOI: 10.1038/s41540-019-0093-4  1
2017 Martirosyan A, De Martino A, Pagnani A, Marinari E. ceRNA crosstalk stabilizes protein expression and affects the correlation pattern of interacting proteins. Scientific Reports. 7: 43673. PMID 28266541 DOI: 10.1038/srep43673  1
2017 Baity-Jesi M, Calore E, Cruz A, Fernandez LA, Gil-Narvión JM, Gordillo-Guerrero A, Iñiguez D, Maiorano A, Marinari E, Martin-Mayor V, Monforte-Garcia J, Muñoz Sudupe A, Navarro D, Parisi G, Perez-Gaviro S, et al. A statics-dynamics equivalence through the fluctuation-dissipation ratio provides a window into the spin-glass phase from nonequilibrium measurements. Proceedings of the National Academy of Sciences of the United States of America. PMID 28174274 DOI: 10.1073/Pnas.1621242114  1
2016 Grigolon S, Di Patti F, De Martino A, Marinari E. Noise processing by microRNA-mediated circuits: The Incoherent Feed-Forward Loop, revisited. Heliyon. 2: e00095. PMID 27441269 DOI: 10.1016/J.Heliyon.2016.E00095  1
2016 Mori M, Hwa T, Martin OC, De Martino A, Marinari E. Constrained Allocation Flux Balance Analysis. Plos Computational Biology. 12: e1004913. PMID 27355325 DOI: 10.1371/Journal.Pcbi.1004913  1
2016 Martirosyan A, Figliuzzi M, Marinari E, De Martino A. Probing the Limits to MicroRNA-Mediated Control of Gene Expression. Plos Computational Biology. 12: e1004715. PMID 26812364 DOI: 10.1371/journal.pcbi.1004715  1
2015 Cammarota C, Marinari E. Spontaneous energy-barrier formation in entropy-driven glassy dynamics. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 92: 010301. PMID 26274105 DOI: 10.1103/Physreve.92.010301  1
2015 Capuani F, De Martino D, Marinari E, De Martino A. Quantitative constraint-based computational model of tumor-to-stroma coupling via lactate shuttle. Scientific Reports. 5: 11880. PMID 26149467 DOI: 10.1038/srep11880  1
2015 Barucca P, Rocchi J, Marinari E, Parisi G, Ricci-Tersenghi F. Cross-correlations of American baby names. Proceedings of the National Academy of Sciences of the United States of America. PMID 26069207 DOI: 10.1073/Pnas.1507143112  1
2014 Figliuzzi M, De Martino A, Marinari E. RNA-based regulation: dynamics and response to perturbations of competing RNAs. Biophysical Journal. 107: 1011-22. PMID 25140437 DOI: 10.1016/j.bpj.2014.06.035  1
2013 De Martino D, Capuani F, Mori M, De Martino A, Marinari E. Counting and correcting thermodynamically infeasible flux cycles in genome-scale metabolic networks. Metabolites. 3: 946-66. PMID 24958259 DOI: 10.3390/metabo3040946  1
2013 Massucci FA, DiNuzzo M, Giove F, Maraviglia B, Castillo IP, Marinari E, De Martino A. Energy metabolism and glutamate-glutamine cycle in the brain: a stoichiometric modeling perspective. Bmc Systems Biology. 7: 103. PMID 24112710 DOI: 10.1186/1752-0509-7-103  1
2013 Figliuzzi M, Marinari E, De Martino A. MicroRNAs as a selective channel of communication between competing RNAs: a steady-state theory. Biophysical Journal. 104: 1203-13. PMID 23473503 DOI: 10.1016/j.bpj.2013.01.012  1
2012 De Martino D, Figliuzzi M, De Martino A, Marinari E. A scalable algorithm to explore the Gibbs energy landscape of genome-scale metabolic networks. Plos Computational Biology. 8: e1002562. PMID 22737065 DOI: 10.1371/journal.pcbi.1002562  1
2012 Baños RA, Cruz A, Fernandez LA, Gil-Narvion JM, Gordillo-Guerrero A, Guidetti M, Iñiguez D, Maiorano A, Marinari E, Martin-Mayor V, Monforte-Garcia J, Muñoz Sudupe A, Navarro D, Parisi G, Perez-Gaviro S, et al. Thermodynamic glass transition in a spin glass without time-reversal symmetry. Proceedings of the National Academy of Sciences of the United States of America. 109: 6452-6. PMID 22493229 DOI: 10.1073/Pnas.1203295109  1
2009 Martelli C, De Martino A, Marinari E, Marsili M, Pérez Castillo I. Identifying essential genes in Escherichia coli from a metabolic optimization principle. Proceedings of the National Academy of Sciences of the United States of America. 106: 2607-11. PMID 19196991 DOI: 10.1073/pnas.0813229106  1
2008 Van Kerrebroeck V, Marinari E. Ranking vertices or edges of a network by loops: a new approach. Physical Review Letters. 101: 098701. PMID 18851664 DOI: 10.1103/PhysRevLett.101.098701  1
2007 Marinari E, Semerjian G, Van Kerrebroeck V. Finding long cycles in graphs. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 75: 066708. PMID 17677390 DOI: 10.1103/Physreve.75.066708  1
2003 Hwa T, Marinari E, Sneppen K, Tang Lh. Localization of denaturation bubbles in random DNA sequences Proceedings of the National Academy of Sciences of the United States of America. 100: 4411-4416. PMID 12672955 DOI: 10.1073/Pnas.0736291100  1
2002 Marinari E, Pagnani A, Ricci-Tersenghi F. Zero-temperature properties of RNA secondary structures. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 65: 041919. PMID 12005885 DOI: 10.1103/PhysRevE.65.041919  1
Low-probability matches
2021 Benedetti M, Dotsenko V, Fischetti G, Marinari E, Oshanin G. Recognition capabilities of a Hopfield model with auxiliary hidden neurons. Physical Review. E. 103: L060401. PMID 34271731 DOI: 10.1103/PhysRevE.103.L060401  0.01
2019 Marinari E. Forgetting Memories and Their Attractiveness. Neural Computation. 31: 503-516. PMID 30645177 DOI: 10.1162/neco_a_01162  0.01
2016 Dean DS, Iorio A, Marinari E, Oshanin G. Sample-to-sample fluctuations of power spectrum of a random motion in a periodic Sinai model. Physical Review. E. 94: 032131. PMID 27739768 DOI: 10.1103/PhysRevE.94.032131  0.01
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