| Year |
Citation |
Score |
| 2018 |
Kittana H, Gomes-Neto JC, Heck K, Geis AL, Segura Muñoz RR, Cody LA, Schmaltz RJ, Bindels LB, Sinha R, Hostetter JM, Benson AK, Ramer-Tait AE. Commensal Strains Can Promote Intestinal Inflammation via Differential Interleukin-6 Production. Frontiers in Immunology. 9: 2318. PMID 30356663 DOI: 10.3389/Fimmu.2018.02318 |
0.365 |
|
| 2018 |
Martínez I, Maldonado-Gomez MX, Gomes-Neto JC, Kittana H, Ding H, Schmaltz R, Joglekar P, Cardona RJ, Marsteller NL, Kembel SW, Benson AK, Peterson DA, Ramer-Tait AE, Walter J. Experimental evaluation of the importance of colonization history in early-life gut microbiota assembly. Elife. 7. PMID 30226190 DOI: 10.7554/Elife.36521 |
0.425 |
|
| 2017 |
Gomes-Neto JC, Kittana H, Mantz S, Segura Munoz RR, Schmaltz RJ, Bindels LB, Clarke J, Hostetter JM, Benson AK, Walter J, Ramer-Tait AE. A gut pathobiont synergizes with the microbiota to instigate inflammatory disease marked by immunoreactivity against other symbionts but not itself. Scientific Reports. 7: 17707. PMID 29255158 DOI: 10.1038/S41598-017-18014-5 |
0.352 |
|
| 2017 |
Sanders ME, Benson A, Lebeer S, Merenstein DJ, Klaenhammer TR. Shared mechanisms among probiotic taxa: implications for general probiotic claims. Current Opinion in Biotechnology. 49: 207-216. PMID 29128720 DOI: 10.1016/J.Copbio.2017.09.007 |
0.329 |
|
| 2017 |
Gomes-Neto JC, Mantz S, Held K, Sinha R, Segura Munoz RR, Schmaltz R, Benson AK, Walter J, Ramer-Tait AE. A real-time PCR assay for accurate quantification of the individual members of the Altered Schaedler Flora microbiota in gnotobiotic mice. Journal of Microbiological Methods. PMID 28189782 DOI: 10.1016/J.Mimet.2017.02.003 |
0.41 |
|
| 2017 |
Zhang X, Mallick H, Tang Z, Zhang L, Cui X, Benson AK, Yi N. Negative binomial mixed models for analyzing microbiome count data. Bmc Bioinformatics. 18: 4. PMID 28049409 DOI: 10.1186/S12859-016-1441-7 |
0.31 |
|
| 2015 |
Ringel-Kulka T, Benson AK, Carroll IM, Kim J, Legge RM, Ringel Y. Molecular Characterization of the Intestinal Microbiota in Patients With and Without Abdominal Bloating. American Journal of Physiology. Gastrointestinal and Liver Physiology. ajpgi.00044.2015. PMID 26702134 DOI: 10.1152/ajpgi.00044.2015 |
0.748 |
|
| 2015 |
Benson AK. Host genetic architecture and the landscape of microbiome composition: humans weigh in. Genome Biology. 16: 203. PMID 26395444 DOI: 10.1186/S13059-015-0775-1 |
0.338 |
|
| 2014 |
Leamy LJ, Kelly SA, Nietfeldt J, Legge RM, Ma F, Hua K, Sinha R, Peterson DA, Walter J, Benson AK, Pomp D. Host genetics and diet, but not immunoglobulin A expression, converge to shape compositional features of the gut microbiome in an advanced intercross population of mice. Genome Biology. 15: 552. PMID 25516416 DOI: 10.1186/S13059-014-0552-6 |
0.777 |
|
| 2014 |
Benson AK, David JR, Gilbreth SE, Smith G, Nietfeldt J, Legge R, Kim J, Sinha R, Duncan CE, Ma J, Singh I. Microbial successions are associated with changes in chemical profiles of a model refrigerated fresh pork sausage during an 80-day shelf life study. Applied and Environmental Microbiology. 80: 5178-94. PMID 24928886 DOI: 10.1128/Aem.00774-14 |
0.736 |
|
| 2014 |
Peng J, Narasimhan S, Marchesi JR, Benson A, Wong FS, Wen L. Long term effect of gut microbiota transfer on diabetes development. Journal of Autoimmunity. 53: 85-94. PMID 24767831 DOI: 10.1016/J.Jaut.2014.03.005 |
0.316 |
|
| 2014 |
Wells JE, Kim M, Bono JL, Kuehn LA, Benson AK. Meat Science and Muscle Biology Symposium: Escherichia coli O157:H7, diet, and fecal microbiome in beef cattle. Journal of Animal Science. 92: 1345-55. PMID 24492542 DOI: 10.2527/Jas.2013-7282 |
0.324 |
|
| 2014 |
Kim M, Kim J, Kuehn LA, Bono JL, Berry ED, Kalchayanand N, Freetly HC, Benson AK, Wells JE. Investigation of bacterial diversity in the feces of cattle fed different diets. Journal of Animal Science. 92: 683-94. PMID 24352967 DOI: 10.2527/Jas.2013-6841 |
0.599 |
|
| 2013 |
Frese SA, Mackenzie DA, Peterson DA, Schmaltz R, Fangman T, Zhou Y, Zhang C, Benson AK, Cody LA, Mulholland F, Juge N, Walter J. Molecular characterization of host-specific biofilm formation in a vertebrate gut symbiont. Plos Genetics. 9: e1004057. PMID 24385934 DOI: 10.1371/Journal.Pgen.1004057 |
0.4 |
|
| 2013 |
Ma J, Benson AK, Kachman SD, Jacobsen DJ, Harshman LG. Drosophila melanogaster Selection for Survival after Infection with Bacillus cereus Spores: Evolutionary Genetic and Phenotypic Investigations of Respiration and Movement. International Journal of Evolutionary Biology. 2013: 576452. PMID 23634317 DOI: 10.1155/2013/576452 |
0.469 |
|
| 2013 |
Ringel Y, Benson AK, Carroll IM, Kim J, Maharshak N, Legge R, Ringel-Kulka T. Tu2090 Molecular Characterization of the Intestinal Microbiota Focusing on Subgroups of Patients With Irritable Bowel Syndrome. Gastroenterology. 144: S-926. DOI: 10.1016/S0016-5085(13)63445-9 |
0.765 |
|
| 2012 |
Ma J, Benson AK, Kachman SD, Hu Z, Harshman LG. Drosophila melanogaster Selection for Survival of Bacillus cereus Infection: Life History Trait Indirect Responses. International Journal of Evolutionary Biology. 2012: 935970. PMID 23094195 DOI: 10.1155/2012/935970 |
0.466 |
|
| 2012 |
McKnite AM, Perez-Munoz ME, Lu L, Williams EG, Brewer S, Andreux PA, Bastiaansen JW, Wang X, Kachman SD, Auwerx J, Williams RW, Benson AK, Peterson DA, Ciobanu DC. Murine gut microbiota is defined by host genetics and modulates variation of metabolic traits. Plos One. 7: e39191. PMID 22723961 DOI: 10.1371/Journal.Pone.0039191 |
0.436 |
|
| 2012 |
Sanapareddy N, Legge RM, Jovov B, McCoy A, Burcal L, Araujo-Perez F, Randall TA, Galanko J, Benson A, Sandler RS, Rawls JF, Abdo Z, Fodor AA, Keku TO. Increased rectal microbial richness is associated with the presence of colorectal adenomas in humans. The Isme Journal. 6: 1858-68. PMID 22622349 DOI: 10.1038/Ismej.2012.43 |
0.765 |
|
| 2012 |
Bokulich NA, Joseph CM, Allen G, Benson AK, Mills DA. Next-generation sequencing reveals significant bacterial diversity of botrytized wine. Plos One. 7: e36357. PMID 22563494 DOI: 10.1371/Journal.Pone.0036357 |
0.391 |
|
| 2012 |
Russo SE, Legge R, Weber KA, Brodie EL, Goldfarb KC, Benson AK, Tan S. Bacterial community structure of contrasting soils underlying Bornean rain forests: Inferences from microarray and next-generation sequencing methods Soil Biology and Biochemistry. 55: 48-59. DOI: 10.1016/J.Soilbio.2012.05.021 |
0.741 |
|
| 2012 |
Palmer NA, Saathoff AJ, Kim J, Benson A, Tobias CM, Twigg P, Vogel KP, Madhavan S, Sarath G. Next-Generation Sequencing of Crown and Rhizome Transcriptome from an Upland, Tetraploid Switchgrass Bioenergy Research. 5: 649-661. DOI: 10.1007/S12155-011-9171-1 |
0.542 |
|
| 2011 |
Kasaikina MV, Kravtsova MA, Lee BC, Seravalli J, Peterson DA, Walter J, Legge R, Benson AK, Hatfield DL, Gladyshev VN. Dietary selenium affects host selenoproteome expression by influencing the gut microbiota. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 25: 2492-9. PMID 21493887 DOI: 10.1096/Fj.11-181990 |
0.775 |
|
| 2011 |
Frese SA, Benson AK, Tannock GW, Loach DM, Kim J, Zhang M, Oh PL, Heng NC, Patil PB, Juge N, Mackenzie DA, Pearson BM, Lapidus A, Dalin E, Tice H, et al. The evolution of host specialization in the vertebrate gut symbiont Lactobacillus reuteri. Plos Genetics. 7: e1001314. PMID 21379339 DOI: 10.1371/Journal.Pgen.1001314 |
0.601 |
|
| 2010 |
Benson AK, Kelly SA, Legge R, Ma F, Low SJ, Kim J, Zhang M, Oh PL, Nehrenberg D, Hua K, Kachman SD, Moriyama EN, Walter J, Peterson DA, Pomp D. Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors. Proceedings of the National Academy of Sciences of the United States of America. 107: 18933-8. PMID 20937875 DOI: 10.1073/Pnas.1007028107 |
0.766 |
|
| 2010 |
Oh PL, Benson AK, Peterson DA, Patil PB, Moriyama EN, Roos S, Walter J. Diversification of the gut symbiont Lactobacillus reuteri as a result of host-driven evolution. The Isme Journal. 4: 377-87. PMID 19924154 DOI: 10.1038/Ismej.2009.123 |
0.42 |
|
| 2009 |
MartÃnez I, Wallace G, Zhang C, Legge R, Benson AK, Carr TP, Moriyama EN, Walter J. Diet-induced metabolic improvements in a hamster model of hypercholesterolemia are strongly linked to alterations of the gut microbiota. Applied and Environmental Microbiology. 75: 4175-84. PMID 19411417 DOI: 10.1128/Aem.00380-09 |
0.756 |
|
| 2009 |
Steele M, Ziebell K, Zhang Y, Benson A, Johnson R, Laing C, Taboada E, Gannon V. Genomic regions conserved in lineage II Escherichia coli O157:H7 strains. Applied and Environmental Microbiology. 75: 3271-80. PMID 19329668 DOI: 10.1128/Aem.02123-08 |
0.345 |
|
| 2009 |
Yang Z, Kim J, Zhang C, Zhang M, Nietfeldt J, Southward CM, Surette MG, Kachman SD, Benson AK. Genomic instability in regions adjacent to a highly conserved pch prophage in Escherichia coli O157:H7 generates diversity in expression patterns of the LEE pathogenicity island. Journal of Bacteriology. 191: 3553-68. PMID 19329643 DOI: 10.1128/Jb.01738-08 |
0.654 |
|
| 2008 |
Ziebell K, Steele M, Zhang Y, Benson A, Taboada EN, Laing C, McEwen S, Ciebin B, Johnson R, Gannon V. Genotypic characterization and prevalence of virulence factors among Canadian Escherichia coli O157:H7 strains. Applied and Environmental Microbiology. 74: 4314-23. PMID 18487402 DOI: 10.1128/Aem.02821-07 |
0.304 |
|
| 2007 |
Dempsey MP, Dobson M, Zhang C, Zhang M, Lion C, Gutiérrez-Martín CB, Iwen PC, Fey PD, Olson ME, Niemeyer D, Francesconi S, Crawford R, Stanley M, Rhodes J, Wagner DM, ... ... Benson AK, et al. Genomic deletion marking an emerging subclone of Francisella tularensis subsp. holarctica in France and the Iberian Peninsula. Applied and Environmental Microbiology. 73: 7465-70. PMID 17890329 DOI: 10.1128/Aem.00646-07 |
0.325 |
|
| 2007 |
Zhang Y, Laing C, Steele M, Ziebell K, Johnson R, Benson AK, Taboada E, Gannon VP. Genome evolution in major Escherichia coli O157:H7 lineages. Bmc Genomics. 8: 121. PMID 17506902 DOI: 10.1186/1471-2164-8-121 |
0.338 |
|
| 2007 |
Steele M, Ziebell K, Zhang Y, Benson A, Konczy P, Johnson R, Gannon V. Identification of Escherichia coli O157:H7 genomic regions conserved in strains with a genotype associated with human infection. Applied and Environmental Microbiology. 73: 22-31. PMID 17056689 DOI: 10.1128/Aem.00982-06 |
0.344 |
|
| 2006 |
Makarova K, Slesarev A, Wolf Y, Sorokin A, Mirkin B, Koonin E, Pavlov A, Pavlova N, Karamychev V, Polouchine N, Shakhova V, Grigoriev I, Lou Y, Rohksar D, Lucas S, ... ... Benson A, et al. Comparative genomics of the lactic acid bacteria. Proceedings of the National Academy of Sciences of the United States of America. 103: 15611-6. PMID 17030793 DOI: 10.1073/Pnas.0607117103 |
0.347 |
|
| 2006 |
Goh YJ, Zhang C, Benson AK, Schlegel V, Lee JH, Hutkins RW. Identification of a putative operon involved in fructooligosaccharide utilization by Lactobacillus paracasei. Applied and Environmental Microbiology. 72: 7518-30. PMID 17028235 DOI: 10.1128/Aem.00877-06 |
0.33 |
|
| 2005 |
Zhang C, Nietfeldt J, Zhang M, Benson AK. Functional consequences of genome evolution in Listeria monocytogenes: the lmo0423 and lmo0422 genes encode sigmaC and LstR, a lineage II-specific heat shock system. Journal of Bacteriology. 187: 7243-53. PMID 16237008 DOI: 10.1128/Jb.187.21.7243-7253.2005 |
0.32 |
|
| 2004 |
Yang Z, Kovar J, Kim J, Nietfeldt J, Smith DR, Moxley RA, Olson ME, Fey PD, Benson AK. Identification of common subpopulations of non-sorbitol-fermenting, beta-glucuronidase-negative Escherichia coli O157:H7 from bovine production environments and human clinical samples. Applied and Environmental Microbiology. 70: 6846-54. PMID 15528552 DOI: 10.1128/Aem.70.11.6846-6854.2004 |
0.654 |
|
| 2004 |
Gilbreth SE, Benson AK, Hutkins RW. Catabolite repression and virulence gene expression in Listeria monocytogenes. Current Microbiology. 49: 95-8. PMID 15297913 DOI: 10.1007/S00284-004-4204-Z |
0.301 |
|
| 2004 |
Samrakandi MM, Zhang C, Zhang M, Nietfeldt J, Kim J, Iwen PC, Olson ME, Fey PD, Duhamel GE, Hinrichs SH, Cirillo JD, Benson AK. Genome diversity among regional populations of Francisella tularensis subspecies tularensis and Francisella tularensis subspecies holarctica isolated from the US. Fems Microbiology Letters. 237: 9-17. PMID 15268932 DOI: 10.1016/J.Femsle.2004.06.008 |
0.563 |
|
| 2004 |
Cetin MS, Zhang C, Hutkins RW, Benson AK. Regulation of transcription of compatible solute transporters by the general stress sigma factor, sigmaB, in Listeria monocytogenes. Journal of Bacteriology. 186: 794-802. PMID 14729706 DOI: 10.1128/Jb.186.3.794-802.2004 |
0.587 |
|
| 2003 |
Zhang C, Zhang M, Ju J, Nietfeldt J, Wise J, Terry PM, Olson M, Kachman SD, Wiedmann M, Samadpour M, Benson AK. Genome diversification in phylogenetic lineages I and II of Listeria monocytogenes: identification of segments unique to lineage II populations. Journal of Bacteriology. 185: 5573-84. PMID 12949110 DOI: 10.1128/Jb.185.18.5573-5584.2003 |
0.338 |
|
| 2003 |
Byrne CM, Erol I, Call JE, Kaspar CW, Buege DR, Hiemke CJ, Fedorka-Cray PJ, Benson AK, Wallace FM, Luchansky JB. Characterization of Escherichia coli O157:H7 from downer and healthy dairy cattle in the upper Midwest region of the United States. Applied and Environmental Microbiology. 69: 4683-8. PMID 12902258 DOI: 10.1128/Aem.69.8.4683-4688.2003 |
0.312 |
|
| 2001 |
Kim J, Nietfeldt J, Ju J, Wise J, Fegan N, Desmarchelier P, Benson AK. Ancestral divergence, genome diversification, and phylogeographic variation in subpopulations of sorbitol-negative, beta-glucuronidase-negative enterohemorrhagic Escherichia coli O157. Journal of Bacteriology. 183: 6885-97. PMID 11698378 DOI: 10.1128/Jb.183.23.6885-6897.2001 |
0.559 |
|
| 2000 |
Becker LA, Evans SN, Hutkins RW, Benson AK. Role of sigma(B) in adaptation of Listeria monocytogenes to growth at low temperature. Journal of Bacteriology. 182: 7083-7. PMID 11092874 DOI: 10.1128/Jb.182.24.7083-7087.2000 |
0.563 |
|
| 1999 |
Kim J, Nietfeldt J, Benson AK. Octamer-based genome scanning distinguishes a unique subpopulation of Escherichia coli O157:H7 strains in cattle. Proceedings of the National Academy of Sciences of the United States of America. 96: 13288-93. PMID 10557313 DOI: 10.1073/Pnas.96.23.13288 |
0.555 |
|
| 1998 |
Becker LA, Cetin MS, Hutkins RW, Benson AK. Identification of the gene encoding the alternative sigma factor sigmaB from Listeria monocytogenes and its role in osmotolerance. Journal of Bacteriology. 180: 4547-54. PMID 9721294 DOI: 10.1128/Jb.180.17.4547-4554.1998 |
0.697 |
|
| Show low-probability matches. |