| Year |
Citation |
Score |
| 2023 |
Funkhouser-Jones LJ, Xu R, Wilke G, Fu Y, Schriefer LA, Makimaa H, Rodgers R, Kennedy EA, VanDussen KL, Stappenbeck TS, Baldridge MT, Sibley LD. Microbiota-produced indole metabolites disrupt mitochondrial function and inhibit Cryptosporidium parvum growth. Cell Reports. 42: 112680. PMID 37384526 DOI: 10.1016/j.celrep.2023.112680 |
0.638 |
|
| 2023 |
Funkhouser-Jones LJ, Xu R, Wilke G, Fu Y, Shriefer LA, Makimaa H, Rodgers R, Kennedy EA, VanDussen KL, Stappenbeck TS, Baldridge MT, Sibley LD. Microbiota produced indole metabolites disrupt host cell mitochondrial energy production and inhibit growth. Biorxiv : the Preprint Server For Biology. PMID 37292732 DOI: 10.1101/2023.05.25.542157 |
0.652 |
|
| 2022 |
Lai CW, Bagadia P, Barisas DAG, Jarjour NN, Wong R, Ohara T, Muegge BD, Lu Q, Xiong S, Edelson BT, Murphy KM, Stappenbeck TS. Mesothelium-Derived Factors Shape GATA6-Positive Large Cavity Macrophages. Journal of Immunology (Baltimore, Md. : 1950). PMID 35868637 DOI: 10.4049/jimmunol.2200278 |
0.786 |
|
| 2021 |
Chiang IL, Wang Y, Fujii S, Muegge BD, Lu Q, Tarr PI, Stappenbeck T. Biofilm Formation and Virulence of is Modulated by pH of Gastrointestinal Tract. Infection and Immunity. IAI0038721. PMID 34424745 DOI: 10.1128/IAI.00387-21 |
0.778 |
|
| 2021 |
Xiong S, Whitehurst CE, Li L, Heo GS, Lai CW, Jain U, Muegge BD, Espenschied ST, Musich RJ, Chen M, Liu Y, Liu TC, Stappenbeck TS. Reverse translation approach generates a signature of penetrating fibrosis in Crohn's disease that is associated with anti-TNF response. Gut. PMID 34261752 DOI: 10.1136/gutjnl-2020-323405 |
0.785 |
|
| 2021 |
Liu TC, Kern JT, Jain U, Sonnek NM, Xiong S, Simpson KF, VanDussen KL, Winkler ES, Haritunians T, Malique A, Lu Q, Sasaki Y, Storer C, Diamond MS, Head RD, ... ... Stappenbeck TS, et al. Western diet induces Paneth cell defects through microbiome alterations and farnesoid X receptor and type I interferon activation. Cell Host & Microbe. PMID 34010595 DOI: 10.1016/j.chom.2021.04.004 |
0.695 |
|
| 2021 |
Jain U, Ver Heul AM, Xiong S, Gregory MH, Demers EG, Kern JT, Lai CW, Muegge BD, Barisas DAG, Leal-Ekman JS, Deepak P, Ciorba MA, Liu TC, Hogan DA, Debbas P, ... ... Stappenbeck TS, et al. is enriched in Crohn's disease intestinal tissue and impairs healing in mice. Science (New York, N.Y.). 371: 1154-1159. PMID 33707263 DOI: 10.1126/science.abd0919 |
0.799 |
|
| 2020 |
den Hartog G, Butcher LD, Ablack AL, Pace LA, Ablack JNG, Xiong R, Das S, Stappenbeck TS, Eckmann L, Ernst PB, Crowe SE. Apurinic/Apyrimidinic Endonuclease 1 Restricts the Internalization of Bacteria Into Human Intestinal Epithelial Cells Through the Inhibition of Rac1. Frontiers in Immunology. 11: 553994. PMID 33603730 DOI: 10.3389/fimmu.2020.553994 |
0.317 |
|
| 2020 |
VanDussen KL, Funkhouser-Jones LJ, Akey ME, Schaefer DA, Ackman K, Riggs MW, Stappenbeck TS, Sibley LD. Neonatal Mouse Gut Metabolites Influence Cryptosporidium parvum Infection in Intestinal Epithelial Cells. Mbio. 11. PMID 33323514 DOI: 10.1128/mBio.02582-20 |
0.666 |
|
| 2020 |
Osterman MT, VanDussen KL, Gordon IO, Davis EM, Li K, Simpson K, Ciorba M, Glover SC, Abraham B, Guo X, Yee EU, Allard FD, Perrigoue JG, Claggett B, Shen B, ... Stappenbeck TS, et al. Epithelial Cell Biomarkers Are Predictive of Response to Biologic Agents in Crohn's Disease. Inflammatory Bowel Diseases. PMID 32964238 DOI: 10.1093/ibd/izaa251 |
0.676 |
|
| 2020 |
Seiler KM, Bajinting A, Alvarado DM, Traore MA, Binkley MM, Goo WH, Lanik WE, Ou J, Ismail U, Iticovici M, King CR, VanDussen KL, Swietlicki EA, Gazit V, Guo J, ... ... Stappenbeck T, et al. Patient-derived small intestinal myofibroblasts direct perfused, physiologically responsive capillary development in a microfluidic Gut-on-a-Chip Model. Scientific Reports. 10: 3842. PMID 32123209 DOI: 10.1038/S41598-020-60672-5 |
0.7 |
|
| 2020 |
Hsieh S, Porter NT, Donermeyer DL, Horvath S, Strout G, Saunders BT, Zhang N, Zinselmeyer B, Martens EC, Stappenbeck TS, Allen PM. Polysaccharide Capsules Equip the Human Symbiont to Modulate Immune Responses to a Dominant Antigen in the Intestine. Journal of Immunology (Baltimore, Md. : 1950). PMID 31900343 DOI: 10.4049/Jimmunol.1901206 |
0.32 |
|
| 2020 |
Jarjour NN, Bradstreet TR, Schwarzkopf EA, Cook ME, Lai CW, Huang SC, Taneja R, Stappenbeck TS, Van Dyken SJ, Urban JF, Edelson BT. BHLHE40 Promotes T2 Cell-Mediated Antihelminth Immunity and Reveals Cooperative CSF2RB Family Cytokines. Journal of Immunology (Baltimore, Md. : 1950). PMID 31900338 DOI: 10.4049/Jimmunol.1900978 |
0.331 |
|
| 2020 |
Wilke G, Wang Y, Ravindran S, Stappenbeck T, Witola WH, Sibley LD. In Vitro Culture of Cryptosporidium parvum Using Stem Cell-Derived Intestinal Epithelial Monolayers. Methods in Molecular Biology (Clifton, N.J.). 2052: 351-372. PMID 31452172 DOI: 10.1007/978-1-4939-9748-0_20 |
0.4 |
|
| 2019 |
Wang Y, Chiang IL, Ohara TE, Fujii S, Cheng J, Muegge BD, Ver Heul A, Han ND, Lu Q, Xiong S, Chen F, Lai CW, Janova H, Wu R, Whitehurst CE, ... ... Stappenbeck TS, et al. Long-Term Culture Captures Injury-Repair Cycles of Colonic Stem Cells. Cell. PMID 31708126 DOI: 10.1016/J.Cell.2019.10.015 |
0.788 |
|
| 2019 |
Wilke G, Funkhouser-Jones LJ, Wang Y, Ravindran S, Wang Q, Beatty WL, Baldridge MT, VanDussen KL, Shen B, Kuhlenschmidt MS, Kuhlenschmidt TB, Witola WH, Stappenbeck TS, Sibley LD. A Stem-Cell-Derived Platform Enables Complete Cryptosporidium Development In Vitro and Genetic Tractability. Cell Host & Microbe. PMID 31231046 DOI: 10.1016/J.Chom.2019.05.007 |
0.697 |
|
| 2019 |
Lloyd-Price J, Arze C, Ananthakrishnan AN, Schirmer M, Avila-Pacheco J, Poon TW, Andrews E, Ajami NJ, Bonham KS, Brislawn CJ, Casero D, Courtney H, Gonzalez A, Graeber TG, Hall AB, ... ... Stappenbeck TS, et al. Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases. Nature. 569: 655-662. PMID 31142855 DOI: 10.1038/S41586-019-1237-9 |
0.378 |
|
| 2019 |
Malvin NP, Kern JT, Liu TC, Brody SL, Stappenbeck T. Autophagy proteins are required for club cell structure and function in airways. American Journal of Physiology. Lung Cellular and Molecular Physiology. PMID 31116580 DOI: 10.1152/Ajplung.00394.2018 |
0.374 |
|
| 2019 |
Pizarro TT, Stappenbeck TS, Rieder F, Rosen MJ, Colombel JF, Donowitz M, Towne J, Mazmanian SK, Faith JJ, Hodin RA, Garrett WS, Fichera A, Poritz LS, Cortes CJ, Shtraizent N, et al. Challenges in IBD Research: Preclinical Human IBD Mechanisms. Inflammatory Bowel Diseases. 25: S5-S12. PMID 31095706 DOI: 10.1093/Ibd/Izz075 |
0.319 |
|
| 2019 |
Jarjour NN, Schwarzkopf EA, Bradstreet TR, Shchukina I, Lin CC, Huang SC, Lai CW, Cook ME, Taneja R, Stappenbeck TS, Randolph GJ, Artyomov MN, Urban JF, Edelson BT. Bhlhe40 mediates tissue-specific control of macrophage proliferation in homeostasis and type 2 immunity. Nature Immunology. PMID 31061528 DOI: 10.1038/S41590-019-0382-5 |
0.352 |
|
| 2019 |
VanDussen KL, Sonnek NM, Stappenbeck TS. L-WRN conditioned medium for gastrointestinal epithelial stem cell culture shows replicable batch-to-batch activity levels across multiple research teams. Stem Cell Research. 37: 101430. PMID 30933720 DOI: 10.1016/J.Scr.2019.101430 |
0.649 |
|
| 2019 |
Jung H, Leal-Ekman JS, Lu Q, Stappenbeck TS. Atg14 protects the intestinal epithelium from TNF-triggered villus atrophy. Autophagy. PMID 30894050 DOI: 10.1080/15548627.2019.1596495 |
0.415 |
|
| 2019 |
Potdar AA, Li D, Haritunians T, VanDussen KL, Fiorino MF, Liu TC, Stappenbeck TS, Fleshner P, Targan SR, McGovern DPB, Bilsborough J. Ileal Gene Expression Data from Crohn's Disease Small Bowel Resections Indicate Distinct Clinical Sub-Groups. Journal of Crohn's & Colitis. PMID 30877309 DOI: 10.1093/Ecco-Jcc/Jjz021 |
0.677 |
|
| 2019 |
Kaiko GE, Chen F, Lai CW, Chiang IL, Perrigoue J, Stojmirović A, Li K, Muegge BD, Jain U, VanDussen KL, Goggins BJ, Keely S, Weaver J, Foster PS, Lawrence DA, ... ... Stappenbeck TS, et al. PAI-1 augments mucosal damage in colitis. Science Translational Medicine. 11. PMID 30842312 DOI: 10.1126/Scitranslmed.Aat0852 |
0.791 |
|
| 2019 |
Wegorzewska MM, Glowacki RWP, Hsieh SA, Donermeyer DL, Hickey CA, Horvath SC, Martens EC, Stappenbeck TS, Allen PM. Diet modulates colonic T cell responses by regulating the expression of a antigen. Science Immunology. 4. PMID 30737355 DOI: 10.1126/Sciimmunol.Aau9079 |
0.339 |
|
| 2019 |
Chen F, Stappenbeck TS. Microbiome control of innate reactivity. Current Opinion in Immunology. 56: 107-113. PMID 30677624 DOI: 10.1016/J.Coi.2018.12.003 |
0.308 |
|
| 2019 |
Davis EM, Zhang D, Glover SC, Stappenbeck T, Wang S, Liu JJ. P128 INHIBITION OF INTESTINAL EPITHELIAL CELL PYROPTOSIS AND ASSOCIATED MUCOSAL BARRIER DEFECTS IS A POTENTIAL THERAPEUTIC MECHANISM OF ACTION FOR MESALAMINE IN IBD Gastroenterology. 156: S88. DOI: 10.1053/J.Gastro.2019.01.204 |
0.383 |
|
| 2019 |
VanDussen KL, Liu T, Simpson KF, Ciorba MA, Haritunians T, Fleshner P, McGovern D, Head RD, Stappenbeck TS. Su1826 – Small Intestinal Epithelial Microvilli-Associated Defects Present in a Multi-Center Replication Cohort of Crohn’s Disease Patients Gastroenterology. 156: S-625. DOI: 10.1016/S0016-5085(19)38463-X |
0.687 |
|
| 2019 |
Xiong S, Liu T, Li F, Muegge B, Lai C, Jain U, Whitehurst CE, Stappenbeck TS. Sa1895 – Characterization and Modeling of the Creeping Fat that Occurs in Crohn’s Disease Gastroenterology. 156: S-445. DOI: 10.1016/S0016-5085(19)37961-2 |
0.765 |
|
| 2018 |
White JP, Xiong S, Malvin NP, Khoury-Hanold W, Heuckeroth RO, Stappenbeck TS, Diamond MS. Intestinal Dysmotility Syndromes following Systemic Infection by Flaviviruses. Cell. PMID 30293866 DOI: 10.1016/J.Cell.2018.08.069 |
0.347 |
|
| 2018 |
Liu TC, Kern JT, VanDussen KL, Xiong S, Kaiko GE, Wilen CB, Rajala MW, Caruso R, Holtzman MJ, Gao F, McGovern DP, Nunez G, Head RD, Stappenbeck TS. Interaction between smoking and ATG16L1T300A triggers Paneth cell defects in Crohn's disease. The Journal of Clinical Investigation. PMID 30137026 DOI: 10.1172/Jci120453 |
0.695 |
|
| 2018 |
Jain U, Lai CW, Xiong S, Goodwin VM, Lu Q, Muegge BD, Christophi GP, VanDussen KL, Cummings BP, Young E, Hambor J, Stappenbeck TS. Temporal Regulation of the Bacterial Metabolite Deoxycholate during Colonic Repair Is Critical for Crypt Regeneration. Cell Host & Microbe. PMID 30122655 DOI: 10.1016/J.Chom.2018.07.019 |
0.767 |
|
| 2018 |
Zhao D, Kim YH, Jeong S, Greenson JK, Chaudhry MS, Hoepting M, Anderson ER, van den Brink MR, Peled JU, Gomes AL, Slingerland AE, Donovan MJ, Harris AC, Levine JE, Özbek U, ... ... Stappenbeck TS, et al. Survival signal REG3-α prevents crypt apoptosis to control acute gastrointestinal graft-versus-host disease. The Journal of Clinical Investigation. PMID 30106382 DOI: 10.1172/Jci99261 |
0.679 |
|
| 2018 |
Wilke G, Ravindran S, Funkhouser-Jones L, Barks J, Wang Q, VanDussen KL, Stappenbeck TS, Kuhlenschmidt TB, Kuhlenschmidt MS, Sibley LD. Monoclonal Antibodies to Intracellular Stages of Cryptosporidium parvum Define Life Cycle Progression . Msphere. 3. PMID 29848759 DOI: 10.1128/mSphere.00124-18 |
0.607 |
|
| 2018 |
VanDussen KL, Stojmirović A, Li K, Liu TC, Kimes PK, Muegge BD, Simpson KF, Ciorba MA, Perrigoue JG, Friedman JR, Towne JE, Head RD, Stappenbeck TS. Abnormal Small Intestinal Epithelial Microvilli in Patients With Crohn's Disease. Gastroenterology. PMID 29782846 DOI: 10.1053/J.Gastro.2018.05.028 |
0.795 |
|
| 2018 |
Barisas DAG, Stappenbeck TS. Intestinal Stem Cells Live Off the Fat of the Land. Cell Stem Cell. 22: 611-612. PMID 29727673 DOI: 10.1016/J.Stem.2018.04.018 |
0.364 |
|
| 2018 |
Chang YL, Rossetti M, Vlamakis H, Casero D, Sunga G, Harre N, Miller S, Humphries R, Stappenbeck T, Simpson KW, Sartor RB, Wu G, Lewis J, Bushman F, McGovern DPB, et al. A screen of Crohn's disease-associated microbial metabolites identifies ascorbate as a novel metabolic inhibitor of activated human T cells. Mucosal Immunology. PMID 29695840 DOI: 10.1038/S41385-018-0022-7 |
0.355 |
|
| 2018 |
Verma MS, Fink MJ, Salmon GL, Fornelos N, Ohara TE, Ryu SH, Vlamakis H, Xavier RJ, Stappenbeck TS, Whitesides GM. A common mechanism links activities of butyrate in the colon. Acs Chemical Biology. PMID 29584955 DOI: 10.1021/Acschembio.8B00073 |
0.321 |
|
| 2018 |
VanDussen KL, Li K, Stojmirović A, Liu T-, Kimes PK, Perrigoue JG, Friedman JR, Towne JE, Head RD, Stappenbeck T. P050 Enterocyte microvillus length and associated gene expression are reduced in Crohn’s disease Journal of Crohn's and Colitis. 12: S117-S117. DOI: 10.1093/Ecco-Jcc/Jjx180.177 |
0.653 |
|
| 2018 |
VanDussen KL, Stojmirović A, Liu T, Kimes PK, Perrigoue JG, Friedman JR, Towne JE, Head RD, Stappenbeck TS. P066 INTESTINAL EPITHELIAL MICROVILLI ARE ABNORMAL IN CROHN’S DISEASE Inflammatory Bowel Diseases. 24: S24-S25. DOI: 10.1053/J.Gastro.2017.11.104 |
0.689 |
|
| 2018 |
VanDussen KL, Stojmirović A, Liu T, Kimes PK, Perrigoue JG, Friedman JR, Towne JE, Head RD, Stappenbeck TS. P066 INTESTINAL EPITHELIAL MICROVILLI ARE ABNORMAL IN CROHN'S DISEASE Gastroenterology. 154: S35. DOI: 10.1053/j.gastro.2017.11.104 |
0.667 |
|
| 2018 |
Liu T, Kern J, VanDussen KL, Xiong S, Caruso R, Nunez G, Head R, Stappenbeck TS. P063 INTERACTIONS OF GENETIC AND ENVIRONMENTAL FACTORS TRIGGER UNIQUE PPAR-GAMMA SIGNATURE IN PANETH CELLS IN CROHN’S DISEASE SUBJECTS AND RELEVANT MOUSE MODELS Inflammatory Bowel Diseases. 24: S24-S24. DOI: 10.1053/J.Gastro.2017.11.101 |
0.665 |
|
| 2018 |
Liu T, Kern J, VanDussen KL, Xiong S, Caruso R, Nunez G, Head R, Stappenbeck TS. P063 INTERACTIONS OF GENETIC AND ENVIRONMENTAL FACTORS TRIGGER UNIQUE PPAR-GAMMA SIGNATURE IN PANETH CELLS IN CROHN’S DISEASE SUBJECTS AND RELEVANT MOUSE MODELS Gastroenterology. 154: S34. DOI: 10.1053/j.gastro.2017.11.101 |
0.639 |
|
| 2018 |
Liu T, Kern J, VanDussen KL, Xiong S, Head R, Stappenbeck T. Su2030 - Farnesoid X Receptor Mediates Western Diet-Induced Paneth Cell Defects Gastroenterology. 154: S-1363. DOI: 10.1016/S0016-5085(18)34454-8 |
0.652 |
|
| 2018 |
Seiler K, Binkley M, Alvarado DM, Iticovici M, Goo W, VanDussen KL, Stappenbeck T, Rubin DC, George S, Ciorba MA, Meacham M, Warner BW. Tu1258 - Development of Patient-Derived “Small Intestine-On-A-Chip” Microfluidic Devices Gastroenterology. 154: S-917. DOI: 10.1016/S0016-5085(18)33084-1 |
0.644 |
|
| 2018 |
Zhao D, Kim Y, Greenson JK, Chaudhry MS, Hoepting M, Jeong S, Anderson ER, Harris AC, Levine JE, Ozbek U, Hooper LV, Stappenbeck TS, Heul AV, Liu T, Reddy P, et al. Regenerating Islet-Derived 3-Alpha (REG3A) Protects the Intestinal Stem Cell Niche to Control Acute Gastrointestinal Graft-Versus-Host Disease Biology of Blood and Marrow Transplantation. 24: S69-S70. DOI: 10.1016/J.Bbmt.2017.12.614 |
0.348 |
|
| 2017 |
Kim AH, Chung JJ, Akilesh S, Koziell A, Jain S, Hodgin JB, Miller MJ, Stappenbeck TS, Miner JH, Shaw AS. B cell-derived IL-4 acts on podocytes to induce proteinuria and foot process effacement. Jci Insight. 2. PMID 29093269 DOI: 10.1172/Jci.Insight.81836 |
0.317 |
|
| 2017 |
Sarkar A, Tindle C, Pranadinata RF, Reed S, Eckmann L, Stappenbeck TS, Ernst PB, Das S. ELMO1 regulates the induction of autophagy and bacterial clearance during enteric infection. The Journal of Infectious Diseases. PMID 29029244 DOI: 10.1093/Infdis/Jix528 |
0.348 |
|
| 2017 |
Chai JN, Peng Y, Rengarajan S, Solomon BD, Ai TL, Shen Z, Perry JSA, Knoop KA, Tanoue T, Narushima S, Honda K, Elson CO, Newberry RD, Stappenbeck TS, Kau AL, et al. Helicobacter species are potent drivers of colonic T cell responses in homeostasis and inflammation. Science Immunology. 2. PMID 28733471 DOI: 10.1126/Sciimmunol.Aal5068 |
0.396 |
|
| 2017 |
Liu TC, Naito T, Liu Z, VanDussen KL, Haritunians T, Li D, Endo K, Kawai Y, Nagasaki M, Kinouchi Y, McGovern DP, Shimosegawa T, Kakuta Y, Stappenbeck TS. LRRK2 but not ATG16L1 is associated with Paneth cell defect in Japanese Crohn's disease patients. Jci Insight. 2: e91917. PMID 28352666 DOI: 10.1172/Jci.Insight.91917 |
0.681 |
|
| 2017 |
Liu T, Naito T, Liu Z, VanDussen K, Haritunians T, Li D, Endo K, Kawai Y, Nagasaki M, Kinouchi Y, McGovern D, Shimosegawa T, Kakuta Y, Stappenbeck TS. Dichotomous Effects of ATG16L1 and LRRK2 in Modulating Paneth Cell Defect in Japanese and North American Crohn's Disease Patients Gastroenterology. 152: S982. DOI: 10.1016/S0016-5085(17)33325-5 |
0.677 |
|
| 2017 |
VanDussen KL, Liu T, Head R, Stappenbeck TS. RNA-SEQ of Formalin-Fixed, Paraffin-Embedded Intestinal Tissue Identifies an Epithelial Defect in crohn's Gastroenterology. 152: S565. DOI: 10.1016/S0016-5085(17)32044-9 |
0.665 |
|
| 2017 |
Liu T, Kern J, Caruso R, Gao F, McGovern D, Nunez G, Stappenbeck TS. Cigarette Smoking Triggers Paneth Cell Defect in Crohn's Disease Patients and Mice Harboring Susceptibility Allele ATG16L1 T300A Gastroenterology. 152: S153-S154. DOI: 10.1016/S0016-5085(17)30837-5 |
0.322 |
|
| 2016 |
Wagner VE, Dey N, Guruge J, Hsiao A, Ahern PP, Semenkovich NP, Blanton LV, Cheng J, Griffin N, Stappenbeck TS, Ilkayeva O, Newgard CB, Petri W, Haque R, Ahmed T, et al. Effects of a gut pathobiont in a gnotobiotic mouse model of childhood undernutrition. Science Translational Medicine. 8: 366ra164. PMID 27881825 DOI: 10.1126/Scitranslmed.Aah4669 |
0.58 |
|
| 2016 |
Desai MS, Seekatz AM, Koropatkin NM, Kamada N, Hickey CA, Wolter M, Pudlo NA, Kitamoto S, Terrapon N, Muller A, Young VB, Henrissat B, Wilmes P, Stappenbeck TS, Núñez G, et al. A Dietary Fiber-Deprived Gut Microbiota Degrades the Colonic Mucus Barrier and Enhances Pathogen Susceptibility. Cell. 167: 1339-1353.e21. PMID 27863247 DOI: 10.1016/J.Cell.2016.10.043 |
0.313 |
|
| 2016 |
Miyoshi H, VanDussen KL, Malvin NP, Ryu SH, Wang Y, Sonnek NM, Lai CW, Stappenbeck TS. Prostaglandin E2 promotes intestinal repair through an adaptive cellular response of the epithelium. The Embo Journal. PMID 27797821 DOI: 10.15252/Embj.201694660 |
0.718 |
|
| 2016 |
Stappenbeck TS, McGovern DP. Paneth Cell Alterations in the Development and Phenotype of Crohn's Disease. Gastroenterology. PMID 27729212 DOI: 10.1053/J.Gastro.2016.10.003 |
0.363 |
|
| 2016 |
Liu TC, Gurram B, Baldridge MT, Head R, Lam V, Luo C, Cao Y, Simpson P, Hayward M, Holtz ML, Bousounis P, Noe J, Lerner D, Cabrera J, Biank V, ... ... Stappenbeck TS, et al. Paneth cell defects in Crohn's disease patients promote dysbiosis. Jci Insight. 1: e86907. PMID 27699268 DOI: 10.1172/Jci.Insight.86907 |
0.414 |
|
| 2016 |
Uchiyama K, Sakiyama T, Hasebe T, Musch MW, Miyoshi H, Nakagawa Y, He TC, Lichtenstein L, Naito Y, Itoh Y, Yoshikawa T, Jabri B, Stappenbeck T, Chang EB. Butyrate and bioactive proteolytic form of Wnt-5a regulate colonic epithelial proliferation and spatial development. Scientific Reports. 6: 32094. PMID 27561676 DOI: 10.1038/Srep32094 |
0.322 |
|
| 2016 |
Garn H, Bahn S, Baune BT, Binder EB, Bisgaard H, Chatila TA, Chavakis T, Culmsee C, Dannlowski U, Gay S, Gern J, Haahtela T, Kircher T, Müller-Ladner U, Neurath MF, ... ... Stappenbeck T, et al. Current concepts in chronic inflammatory diseases: Interactions between microbes, cellular metabolism, and inflammation. The Journal of Allergy and Clinical Immunology. 138: 47-56. PMID 27373325 DOI: 10.1016/J.Jaci.2016.02.046 |
0.35 |
|
| 2016 |
Kaiko GE, Ryu SH, Koues OI, Collins PL, Solnica-Krezel L, Pearce EJ, Pearce EL, Oltz EM, Stappenbeck TS. The Colonic Crypt Protects Stem Cells from Microbiota-Derived Metabolites. Cell. PMID 27264604 DOI: 10.1016/J.Cell.2016.05.018 |
0.397 |
|
| 2016 |
Liu TC, Stappenbeck TS. Genetics and Pathogenesis of Inflammatory Bowel Disease. Annual Review of Pathology. PMID 26907531 DOI: 10.1146/Annurev-Pathol-012615-044152 |
0.323 |
|
| 2016 |
Liu TC, Gurram B, Baldridge M, Head R, Lam V, Luo C, Cao Y, Simpson P, Hayward M, Holtz M, Noe J, Lerner D, Cabrera J, Biank V, Stephens M, ... ... Stappenbeck T, et al. O-011 Paneth Cell Phenotypes Define a Subtype of Pediatric Crohn's Disease Through Alterations in Host-Microbial Interactions. Inflammatory Bowel Diseases. 22: S4. PMID 26849729 DOI: 10.1097/01.Mib.0000480097.23732.5E |
0.42 |
|
| 2016 |
VanDussen K, Miyoshi H, Sonnek N, Ciorba M, Stappenbeck T. O-013 Defining the Basis of Epithelial Defects in Crohnʼs Using Intestinal Spheroid Culture Inflammatory Bowel Diseases. 22: S1-S80. DOI: 10.1097/01.Mib.0000480099.17894.1F |
0.658 |
|
| 2016 |
Liu T, VanDussen KL, Stappenbeck T. Sa1823 Vitamin D Receptor Affects Small Intestinal Paneth Cell Phenotype in Crohn's Disease Patients Independent of ATG16L1 Modulation Gastroenterology. 150: S373. DOI: 10.1016/S0016-5085(16)31312-9 |
0.686 |
|
| 2016 |
Naito T, Liu T, Kakuta Y, Head R, Liu Z, Haritunians T, Li D, Endo K, Kinouchi Y, McGovern D, Stappenbeck T, Shimosegawa T. 321 Paneth Cell Phenotype is Associated With Novel Genetic Determinants and Clinical Outcome in Japanese Crohn's Disease Patients Gastroenterology. 150: S75. DOI: 10.1016/S0016-5085(16)30367-5 |
0.323 |
|
| 2015 |
Tinkum KL, Stemler KM, White LS, Loza AJ, Jeter-Jones S, Michalski BM, Kuzmicki C, Pless R, Stappenbeck TS, Piwnica-Worms D, Piwnica-Worms H. Fasting protects mice from lethal DNA damage by promoting small intestinal epithelial stem cell survival. Proceedings of the National Academy of Sciences of the United States of America. PMID 26644583 DOI: 10.1073/Pnas.1509249112 |
0.321 |
|
| 2015 |
Song C, Lee JS, Gilfillan S, Robinette ML, Newberry RD, Stappenbeck TS, Mack M, Cella M, Colonna M. Unique and redundant functions of NKp46+ ILC3s in models of intestinal inflammation. The Journal of Experimental Medicine. PMID 26458769 DOI: 10.1084/Jem.20151403 |
0.388 |
|
| 2015 |
Ebihara T, Song C, Ryu SH, Plougastel-Douglas B, Yang L, Levanon D, Groner Y, Bern MD, Stappenbeck TS, Colonna M, Egawa T, Yokoyama WM. Runx3 specifies lineage commitment of innate lymphoid cells. Nature Immunology. PMID 26414766 DOI: 10.1038/Ni.3272 |
0.362 |
|
| 2015 |
Avetisyan M, Wang H, Schill EM, Bery S, Grider JR, Hassell JA, Stappenbeck T, Heuckeroth RO. Hepatocyte Growth Factor and MET Support Mouse Enteric Nervous System Development, the Peristaltic Response, and Intestinal Epithelial Proliferation in Response to Injury. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 35: 11543-58. PMID 26290232 DOI: 10.1523/Jneurosci.5267-14.2015 |
0.379 |
|
| 2015 |
Ryu SH, Stappenbeck TS. Gut-Pancreatic Axis AMPlified in Islets of Langerhans. Immunity. 43: 216-8. PMID 26287677 DOI: 10.1016/J.Immuni.2015.08.003 |
0.335 |
|
| 2015 |
Manieri NA, Mack MR, Himmelrich MD, Worthley DL, Hanson EM, Eckmann L, Wang TC, Stappenbeck TS. Mucosally transplanted mesenchymal stem cells stimulate intestinal healing by promoting angiogenesis. The Journal of Clinical Investigation. 125: 3606-18. PMID 26280574 DOI: 10.1172/Jci81423 |
0.39 |
|
| 2015 |
Dickinson JD, Alevy Y, Malvin NP, Patel KK, Gunsten SP, Holtzman MJ, Stappenbeck TS, Brody SL. IL13 activates autophagy to regulate secretion in airway epithelial cells. Autophagy. 0. PMID 26062017 DOI: 10.1080/15548627.2015.1056967 |
0.593 |
|
| 2015 |
Elliott EN, Sheaffer KL, Schug J, Stappenbeck TS, Kaestner KH. Dnmt1 is essential to maintain progenitors in the perinatal intestinal epithelium. Development (Cambridge, England). 142: 2163-72. PMID 26023099 DOI: 10.1242/Dev.117341 |
0.324 |
|
| 2015 |
Hickey CA, Kuhn KA, Donermeyer DL, Porter NT, Jin C, Cameron EA, Jung H, Kaiko GE, Wegorzewska M, Malvin NP, Glowacki RW, Hansson GC, Allen PM, Martens EC, Stappenbeck TS. Colitogenic Bacteroides thetaiotaomicron Antigens Access Host Immune Cells in a Sulfatase-Dependent Manner via Outer Membrane Vesicles. Cell Host & Microbe. 17: 672-80. PMID 25974305 DOI: 10.1016/J.Chom.2015.04.002 |
0.344 |
|
| 2015 |
Eckmann L, Stappenbeck TS. IgG "detoxes" the intestinal mucosa. Cell Host & Microbe. 17: 538-9. PMID 25974292 DOI: 10.1016/J.Chom.2015.05.001 |
0.348 |
|
| 2015 |
Kau AL, Planer JD, Liu J, Rao S, Yatsunenko T, Trehan I, Manary MJ, Liu TC, Stappenbeck TS, Maleta KM, Ashorn P, Dewey KG, Houpt ER, Hsieh CS, Gordon JI. Functional characterization of IgA-targeted bacterial taxa from undernourished Malawian children that produce diet-dependent enteropathy. Science Translational Medicine. 7: 276ra24. PMID 25717097 DOI: 10.1126/Scitranslmed.Aaa4877 |
0.781 |
|
| 2015 |
Moon C, Baldridge MT, Wallace MA, Burnham CA, Virgin HW, Stappenbeck TS. Vertically transmitted faecal IgA levels determine extra-chromosomal phenotypic variation. Nature. 521: 90-3. PMID 25686606 DOI: 10.1038/Nature14139 |
0.61 |
|
| 2015 |
Norman JM, Handley SA, Baldridge MT, Droit L, Liu CY, Keller BC, Kambal A, Monaco CL, Zhao G, Fleshner P, Stappenbeck TS, McGovern DP, Keshavarzian A, Mutlu EA, Sauk J, et al. Disease-specific alterations in the enteric virome in inflammatory bowel disease. Cell. 160: 447-60. PMID 25619688 DOI: 10.1016/J.Cell.2015.01.002 |
0.4 |
|
| 2015 |
Sun L, Miyoshi H, Origanti S, Nice TJ, Barger AC, Manieri NA, Fogel LA, French AR, Piwnica-Worms D, Piwnica-Worms H, Virgin HW, Lenschow DJ, Stappenbeck TS. Type I interferons link viral infection to enhanced epithelial turnover and repair. Cell Host & Microbe. 17: 85-97. PMID 25482432 DOI: 10.1016/J.Chom.2014.11.004 |
0.326 |
|
| 2015 |
VanDussen KL, Marinshaw JM, Shaikh N, Miyoshi H, Moon C, Tarr PI, Ciorba MA, Stappenbeck TS. Development of an enhanced human gastrointestinal epithelial culture system to facilitate patient-based assays. Gut. 64: 911-20. PMID 25007816 DOI: 10.1136/Gutjnl-2013-306651 |
0.764 |
|
| 2015 |
Tinkum KL, Stemler KM, White LS, Loza AJ, Jeter-Jones S, Michalski BM, Kuzmicki CE, Pless R, Stappenbeck T, Piwnica-Worms D, Piwnica-Worms H. Abstract 2316: Fasting protects mice from lethal DNA damage by promoting small intestinal stem cell survival and by inhibiting acute inflammation Cancer Research. 75: 2316-2316. DOI: 10.1158/1538-7445.Am2015-2316 |
0.36 |
|
| 2014 |
Hannan TJ, Roberts PL, Riehl TE, van der Post S, Binkley JM, Schwartz DJ, Miyoshi H, Mack M, Schwendener RA, Hooton TM, Stappenbeck TS, Hansson GC, Stenson WF, Colonna M, Stapleton AE, et al. Inhibition of Cyclooxygenase-2 Prevents Chronic and Recurrent Cystitis. Ebiomedicine. 1: 46-57. PMID 26125048 DOI: 10.1016/J.Ebiom.2014.10.011 |
0.329 |
|
| 2014 |
Kuhn KA, Manieri NA, Liu TC, Stappenbeck TS. IL-6 stimulates intestinal epithelial proliferation and repair after injury. Plos One. 9: e114195. PMID 25478789 DOI: 10.1371/Journal.Pone.0114195 |
0.307 |
|
| 2014 |
Steed AL, Stappenbeck TS. Role of viruses and bacteria-virus interactions in autoimmunity. Current Opinion in Immunology. 31: 102-7. PMID 25459001 DOI: 10.1016/J.Coi.2014.10.006 |
0.307 |
|
| 2014 |
Kaiko GE, Stappenbeck TS. Host-microbe interactions shaping the gastrointestinal environment. Trends in Immunology. 35: 538-48. PMID 25220948 DOI: 10.1016/J.It.2014.08.002 |
0.366 |
|
| 2014 |
Lassen KG, Kuballa P, Conway KL, Patel KK, Becker CE, Peloquin JM, Villablanca EJ, Norman JM, Liu TC, Heath RJ, Becker ML, Fagbami L, Horn H, Mercer J, Yilmaz OH, ... ... Stappenbeck TS, et al. Atg16L1 T300A variant decreases selective autophagy resulting in altered cytokine signaling and decreased antibacterial defense. Proceedings of the National Academy of Sciences of the United States of America. 111: 7741-6. PMID 24821797 DOI: 10.1073/Pnas.1407001111 |
0.596 |
|
| 2014 |
Chen GY, Stappenbeck TS. Mucus, it is not just a static barrier. Science Signaling. 7: pe11. PMID 24782564 DOI: 10.1126/Scisignal.2005357 |
0.377 |
|
| 2014 |
Liu TC, Gao F, McGovern DP, Stappenbeck TS. Spatial and temporal stability of paneth cell phenotypes in Crohn's disease: implications for prognostic cellular biomarker development. Inflammatory Bowel Diseases. 20: 646-51. PMID 24552829 DOI: 10.1097/01.Mib.0000442838.21040.D7 |
0.388 |
|
| 2014 |
Moon C, VanDussen KL, Miyoshi H, Stappenbeck TS. Development of a primary mouse intestinal epithelial cell monolayer culture system to evaluate factors that modulate IgA transcytosis. Mucosal Immunology. 7: 818-28. PMID 24220295 DOI: 10.1038/Mi.2013.98 |
0.778 |
|
| 2014 |
VanDussen KL, Liu TC, Li D, Towfic F, Modiano N, Winter R, Haritunians T, Taylor KD, Dhall D, Targan SR, Xavier RJ, McGovern DP, Stappenbeck TS. Genetic variants synthesize to produce paneth cell phenotypes that define subtypes of Crohn's disease. Gastroenterology. 146: 200-9. PMID 24076061 DOI: 10.1053/J.Gastro.2013.09.048 |
0.702 |
|
| 2014 |
Liu T, Salzman NH, Arnold CA, Stappenbeck TS. Tu1165 Evolution of Paneth Cell Phenotype in Crohn's Disease: Implications for Disease Etiopathogenesis Gastroenterology. 146: S-772. DOI: 10.1016/S0016-5085(14)62786-4 |
0.362 |
|
| 2014 |
Haritunians T, Liu T, VanDussen KL, Li D, Stappenbeck TS, McGovern DP. 129 Genetic Variation Associated With Paneth Cell Morphological Changes in CD Gastroenterology. 146: S-36. DOI: 10.1016/S0016-5085(14)60124-4 |
0.652 |
|
| 2013 |
Miyoshi H, Stappenbeck TS. The young and the Wnt-less: transplantable fetal intestinal spheroids without Wnts. Cell Stem Cell. 13: 637-8. PMID 24315434 DOI: 10.1016/J.Stem.2013.11.019 |
0.335 |
|
| 2013 |
Miyoshi H, Stappenbeck TS. In vitro expansion and genetic modification of gastrointestinal stem cells in spheroid culture. Nature Protocols. 8: 2471-82. PMID 24232249 DOI: 10.1038/Nprot.2013.153 |
0.378 |
|
| 2013 |
Patel KK, Miyoshi H, Beatty WL, Head RD, Malvin NP, Cadwell K, Guan JL, Saitoh T, Akira S, Seglen PO, Dinauer MC, Virgin HW, Stappenbeck TS. Autophagy proteins control goblet cell function by potentiating reactive oxygen species production. The Embo Journal. 32: 3130-44. PMID 24185898 DOI: 10.1038/Emboj.2013.233 |
0.523 |
|
| 2013 |
Kuhn KA, Stappenbeck TS. Peripheral education of the immune system by the colonic microbiota. Seminars in Immunology. 25: 364-9. PMID 24169518 DOI: 10.1016/J.Smim.2013.10.002 |
0.324 |
|
| 2013 |
Conway KL, Kuballa P, Song JH, Patel KK, Castoreno AB, Yilmaz OH, Jijon HB, Zhang M, Aldrich LN, Villablanca EJ, Peloquin JM, Goel G, Lee IA, Mizoguchi E, Shi HN, ... ... Stappenbeck TS, et al. Atg16l1 is required for autophagy in intestinal epithelial cells and protection of mice from Salmonella infection. Gastroenterology. 145: 1347-57. PMID 23973919 DOI: 10.1053/J.Gastro.2013.08.035 |
0.531 |
|
| 2013 |
Byers DE, Alexander-Brett J, Patel AC, Agapov E, Dang-Vu G, Jin X, Wu K, You Y, Alevy Y, Girard JP, Stappenbeck TS, Patterson GA, Pierce RA, Brody SL, Holtzman MJ. Long-term IL-33-producing epithelial progenitor cells in chronic obstructive lung disease. The Journal of Clinical Investigation. 123: 3967-82. PMID 23945235 DOI: 10.1172/Jci65570 |
0.318 |
|
| 2013 |
Satpathy AT, Briseño CG, Lee JS, Ng D, Manieri NA, Kc W, Wu X, Thomas SR, Lee WL, Turkoz M, McDonald KG, Meredith MM, Song C, Guidos CJ, Newberry RD, ... ... Stappenbeck TS, et al. Notch2-dependent classical dendritic cells orchestrate intestinal immunity to attaching-and-effacing bacterial pathogens. Nature Immunology. 14: 937-48. PMID 23913046 DOI: 10.1038/Ni.2679 |
0.346 |
|
| 2013 |
Aly H, Rohatgi N, Marshall CA, Grossenheider TC, Miyoshi H, Stappenbeck TS, Matkovich SJ, McDaniel ML. A novel strategy to increase the proliferative potential of adult human β-cells while maintaining their differentiated phenotype. Plos One. 8: e66131. PMID 23776620 DOI: 10.1371/Journal.Pone.0066131 |
0.332 |
|
| 2013 |
Miyoshi H, Stappenbeck TS. Counteracting stem cell expansion during wound repair: distinct roles of non-canonical Wnt and TGF-β. Cell Cycle (Georgetown, Tex.). 12: 387-8. PMID 23324346 DOI: 10.4161/Cc.23552 |
0.379 |
|
| 2013 |
Patel KK, Stappenbeck TS. Autophagy and intestinal homeostasis. Annual Review of Physiology. 75: 241-62. PMID 23216414 DOI: 10.1146/annurev-physiol-030212-183658 |
0.563 |
|
| 2013 |
Liu T, VanDussen K, Gao F, Li D, Towfic F, Modiano N, Winter R, Haritunians T, Dhall D, Targan S, Xavier R, McGovern D, Stappenbeck T. O-025 Paneth Cell Phenotype Correlates with Genetics, Transcriptome Profile, Pathologic Hallmark and Predicts Clinical Outcome in Patients with Crohnʼs Disease Inflammatory Bowel Diseases. 19: S15. DOI: 10.1097/01.Mib.0000438994.14825.01 |
0.654 |
|
| 2013 |
VanDussen KL, Head R, Stappenbeck TS. Sa1816 RNA-Seq Analysis of Formalin-Fixed Paraffin-Embedded Intestinal Tissue Identifies a Gene Network Associated With Epithelial Dysregulation in Crohn's Disease Patients Gastroenterology. 144: S-312. DOI: 10.1016/S0016-5085(13)61126-9 |
0.677 |
|
| 2013 |
VanDussen KL, Marinshaw JM, Miyoshi H, Ciorba MA, Stappenbeck TS. 280 Efficient Isolation, Expansion and Differentiation of Human Epithelial Stem Cells From Endoscopic Biopsies of the Gastrointestinal Tract Gastroenterology. 144: S-62-S-63. DOI: 10.1016/S0016-5085(13)60226-7 |
0.677 |
|
| 2012 |
Yokoyama CC, Loh J, Zhao G, Stappenbeck TS, Wang D, Huang HV, Virgin HW, Thackray LB. Adaptive immunity restricts replication of novel murine astroviruses. Journal of Virology. 86: 12262-70. PMID 22951832 DOI: 10.1128/Jvi.02018-12 |
0.361 |
|
| 2012 |
Wakeman D, Schneider JE, Liu J, Wandu WS, Erwin CR, Guo J, Stappenbeck TS, Warner BW. Deletion of p38-alpha mitogen-activated protein kinase within the intestinal epithelium promotes colon tumorigenesis. Surgery. 152: 286-93. PMID 22828150 DOI: 10.1016/J.Surg.2012.05.009 |
0.336 |
|
| 2012 |
Moon C, Stappenbeck TS. Viral interactions with the host and microbiota in the intestine. Current Opinion in Immunology. 24: 405-10. PMID 22626624 DOI: 10.1016/J.Coi.2012.05.002 |
0.624 |
|
| 2012 |
Manieri NA, Drylewicz MR, Miyoshi H, Stappenbeck TS. Igf2bp1 is required for full induction of Ptgs2 mRNA in colonic mesenchymal stem cells in mice. Gastroenterology. 143: 110-21.e10. PMID 22465430 DOI: 10.1053/J.Gastro.2012.03.037 |
0.77 |
|
| 2012 |
Malvin NP, Seno H, Stappenbeck TS. Colonic epithelial response to injury requires Myd88 signaling in myeloid cells Mucosal Immunology. 5: 194-206. PMID 22258450 DOI: 10.1038/Mi.2011.65 |
0.407 |
|
| 2012 |
Ciorba MA, Riehl TE, Rao MS, Moon C, Ee X, Nava GM, Walker MR, Marinshaw JM, Stappenbeck TS, Stenson WF. Lactobacillus probiotic protects intestinal epithelium from radiation injury in a TLR-2/cyclo-oxygenase-2-dependent manner. Gut. 61: 829-38. PMID 22027478 DOI: 10.1136/Gutjnl-2011-300367 |
0.647 |
|
| 2011 |
Lathrop SK, Bloom SM, Rao SM, Nutsch K, Lio CW, Santacruz N, Peterson DA, Stappenbeck TS, Hsieh CS. Peripheral education of the immune system by colonic commensal microbiota. Nature. 478: 250-4. PMID 21937990 DOI: 10.1038/Nature10434 |
0.641 |
|
| 2011 |
Nava GM, Stappenbeck TS. Diversity of the autochthonous colonic microbiota. Gut Microbes. 2: 99-104. PMID 21694499 DOI: 10.4161/Gmic.2.2.15416 |
0.387 |
|
| 2011 |
Bloom SM, Bijanki VN, Nava GM, Sun L, Malvin NP, Donermeyer DL, Dunne WM, Allen PM, Stappenbeck TS. Commensal Bacteroides species induce colitis in host-genotype-specific fashion in a mouse model of inflammatory bowel disease. Cell Host & Microbe. 9: 390-403. PMID 21575910 DOI: 10.1016/J.Chom.2011.04.009 |
0.667 |
|
| 2011 |
Sun L, Nava GM, Stappenbeck TS. Host genetic susceptibility, dysbiosis, and viral triggers in inflammatory bowel disease. Current Opinion in Gastroenterology. 27: 321-7. PMID 21483258 DOI: 10.1097/Mog.0B013E32834661B4 |
0.365 |
|
| 2011 |
Patel AC, Brody SL, Stappenbeck TS, Holtzman MJ. Tracking cell lineage to rediscover (again) the switch from ciliated to mucous cells. American Journal of Respiratory Cell and Molecular Biology. 44: 261-3. PMID 21364232 DOI: 10.1165/Rcmb.2010-0468Ed |
0.314 |
|
| 2011 |
Lee G, Origanti S, White LS, Sun J, Stappenbeck TS, Piwnica-Worms H. Contributions made by CDC25 phosphatases to proliferation of intestinal epithelial stem and progenitor cells. Plos One. 6: e15561. PMID 21283624 DOI: 10.1371/Journal.Pone.0015561 |
0.43 |
|
| 2011 |
von Furstenberg RJ, Gulati AS, Baxi A, Doherty JM, Stappenbeck TS, Gracz AD, Magness ST, Henning SJ. Sorting mouse jejunal epithelial cells with CD24 yields a population with characteristics of intestinal stem cells. American Journal of Physiology. Gastrointestinal and Liver Physiology. 300: G409-17. PMID 21183658 DOI: 10.1152/Ajpgi.00453.2010 |
0.366 |
|
| 2011 |
Manieri NA, Stappenbeck TS. Mesenchymal stem cell therapy of intestinal disease: are their effects systemic or localized? Current Opinion in Gastroenterology. 27: 119-24. PMID 21150589 DOI: 10.1097/Mog.0B013E3283423F20 |
0.394 |
|
| 2011 |
Nava GM, Friedrichsen HJ, Stappenbeck TS. Spatial organization of intestinal microbiota in the mouse ascending colon. The Isme Journal. 5: 627-38. PMID 20981114 DOI: 10.1038/Ismej.2010.161 |
0.336 |
|
| 2011 |
Stappenbeck TS, Rioux JD, Mizoguchi A, Saitoh T, Huett A, Darfeuille-Michaud A, Wileman T, Mizushima N, Carding S, Akira S, Parkes M, Xavier RJ. Crohn disease: a current perspective on genetics, autophagy and immunity. Autophagy. 7: 355-74. PMID 20729636 DOI: 10.4161/Auto.7.4.13074 |
0.362 |
|
| 2010 |
Cadwell K, Patel KK, Maloney NS, Liu TC, Ng AC, Storer CE, Head RD, Xavier R, Stappenbeck TS, Virgin HW. Virus-plus-susceptibility gene interaction determines Crohn's disease gene Atg16L1 phenotypes in intestine. Cell. 141: 1135-45. PMID 20602997 DOI: 10.1016/J.Cell.2010.05.009 |
0.526 |
|
| 2010 |
Edelson BT, KC W, Juang R, Kohyama M, Benoit LA, Klekotka PA, Moon C, Albring JC, Ise W, Michael DG, Bhattacharya D, Stappenbeck TS, Holtzman MJ, Sung SS, Murphy TL, et al. Peripheral CD103+ dendritic cells form a unified subset developmentally related to CD8alpha+ conventional dendritic cells. The Journal of Experimental Medicine. 207: 823-36. PMID 20351058 DOI: 10.1084/Jem.20091627 |
0.614 |
|
| 2010 |
Hamm CM, Reimers MA, McCullough CK, Gorbe EB, Lu J, Gu CC, Li E, Dieckgraefe BK, Gong Q, Stappenbeck TS, Stone CD, Dietz DW, Hunt SR. NOD2 status and human ileal gene expression. Inflammatory Bowel Diseases. 16: 1649-57. PMID 20155851 DOI: 10.1002/Ibd.21208 |
0.309 |
|
| 2010 |
Stappenbeck TS. The role of autophagy in Paneth cell differentiation and secretion Mucosal Immunology. 3: 8-10. PMID 19890269 DOI: 10.1038/Mi.2009.121 |
0.413 |
|
| 2010 |
von Furstenberg RJ, Gulati AS, Stappenbeck TS, Henning SJ. 787 Sorting With CD24 Yields a Population Markedly Enriched for Markers of Intestinal Stem Cells Gastroenterology. 138: S-111. DOI: 10.1016/S0016-5085(10)60508-2 |
0.352 |
|
| 2009 |
Cadwell K, Stappenbeck TS, Virgin HW. Role of autophagy and autophagy genes in inflammatory bowel disease. Current Topics in Microbiology and Immunology. 335: 141-67. PMID 19802564 DOI: 10.1007/978-3-642-00302-8_7 |
0.403 |
|
| 2009 |
Lee G, White LS, Hurov KE, Stappenbeck TS, Piwnica-Worms H. Response of small intestinal epithelial cells to acute disruption of cell division through CDC25 deletion. Proceedings of the National Academy of Sciences of the United States of America. 106: 4701-6. PMID 19273838 DOI: 10.1073/Pnas.0900751106 |
0.394 |
|
| 2009 |
Cadwell K, Patel KK, Komatsu M, Virgin HW, Stappenbeck TS. A common role for Atg16L1, Atg5 and Atg7 in small intestinal Paneth cells and Crohn disease. Autophagy. 5: 250-2. PMID 19139628 DOI: 10.4161/Auto.5.2.7560 |
0.595 |
|
| 2009 |
Liu JY, Seno H, Miletic AV, Mills JC, Swat W, Stappenbeck TS. Vav proteins are necessary for correct differentiation of mouse cecal and colonic enterocytes. Journal of Cell Science. 122: 324-34. PMID 19139088 DOI: 10.1242/Jcs.033720 |
0.403 |
|
| 2009 |
Walker MR, Patel KK, Stappenbeck TS. The stem cell niche. The Journal of Pathology. 217: 169-80. PMID 19089901 DOI: 10.1002/path.2474 |
0.525 |
|
| 2008 |
Cadwell K, Liu JY, Brown SL, Miyoshi H, Loh J, Lennerz JK, Kishi C, Kc W, Carrero JA, Hunt S, Stone CD, Brunt EM, Xavier RJ, Sleckman BP, Li E, ... ... Stappenbeck TS, et al. A key role for autophagy and the autophagy gene Atg16l1 in mouse and human intestinal Paneth cells. Nature. 456: 259-63. PMID 18849966 DOI: 10.1038/Nature07416 |
0.356 |
|
| 2008 |
Geske MJ, Zhang X, Patel KK, Ornitz DM, Stappenbeck TS. Fgf9 signaling regulates small intestinal elongation and mesenchymal development. Development (Cambridge, England). 135: 2959-68. PMID 18653563 DOI: 10.1242/Dev.020453 |
0.565 |
|
| 2008 |
Mahoney ZX, Stappenbeck TS, Miner JH. Laminin alpha 5 influences the architecture of the mouse small intestine mucosa. Journal of Cell Science. 121: 2493-502. PMID 18628307 DOI: 10.1242/Jcs.025528 |
0.38 |
|
| 2008 |
Doherty JM, Geske MJ, Stappenbeck TS, Mills JC. Diverse adult stem cells share specific higher-order patterns of gene expression. Stem Cells (Dayton, Ohio). 26: 2124-30. PMID 18511597 DOI: 10.1634/Stemcells.2008-0380 |
0.337 |
|
| 2008 |
Stappenbeck T. Role of microbes in the adaptation of the colonic epithelial progenitor niche during injury. Journal of Pediatric Gastroenterology and Nutrition. E12. PMID 18354316 DOI: 10.1097/01.Mpg.0000313825.78594.42 |
0.308 |
|
| 2008 |
Kang SS, Bloom SM, Norian LA, Geske MJ, Flavell RA, Stappenbeck TS, Allen PM. An antibiotic-responsive mouse model of fulminant ulcerative colitis. Plos Medicine. 5: e41. PMID 18318596 DOI: 10.1371/Journal.Pmed.0050041 |
0.699 |
|
| 2008 |
Walker MR, Stappenbeck TS. Deciphering the 'black box' of the intestinal stem cell niche: taking direction from other systems. Current Opinion in Gastroenterology. 24: 115-20. PMID 18301259 DOI: 10.1097/Mog.0B013E3282F4954F |
0.397 |
|
| 2007 |
Vooijs M, Ong CT, Hadland B, Huppert S, Liu Z, Korving J, van den Born M, Stappenbeck T, Wu Y, Clevers H, Kopan R. Mapping the consequence of Notch1 proteolysis in vivo with NIP-CRE. Development (Cambridge, England). 134: 535-44. PMID 17215306 DOI: 10.1242/Dev.02733 |
0.301 |
|
| 2007 |
Brown SL, Riehl TE, Walker MR, Geske MJ, Doherty JM, Stenson WF, Stappenbeck TS. Myd88-dependent positioning of Ptgs2-expressing stromal cells maintains colonic epithelial proliferation during injury. The Journal of Clinical Investigation. 117: 258-69. PMID 17200722 DOI: 10.1172/Jci29159 |
0.365 |
|
| 2007 |
Ramsey VG, Doherty JM, Chen CC, Stappenbeck TS, Konieczny SF, Mills JC. The maturation of mucus-secreting gastric epithelial progenitors into digestive-enzyme secreting zymogenic cells requires Mist1. Development (Cambridge, England). 134: 211-22. PMID 17164426 DOI: 10.1242/Dev.02700 |
0.376 |
|
| 2007 |
Miner JH, Mahoney ZX, Stappenbeck TS. Laminins regulate crypt‐villus architecture and epithelial cell behavior in the mouse intestine The Faseb Journal. 21. DOI: 10.1096/Fasebj.21.5.A43-E |
0.374 |
|
| 2006 |
Mahoney ZX, Sammut B, Xavier RJ, Cunningham J, Go G, Brim KL, Stappenbeck TS, Miner JH, Swat W. Discs-large homolog 1 regulates smooth muscle orientation in the mouse ureter. Proceedings of the National Academy of Sciences of the United States of America. 103: 19872-7. PMID 17172448 DOI: 10.1073/Pnas.0609326103 |
0.301 |
|
| 2006 |
Giannakis M, Stappenbeck TS, Mills JC, Leip DG, Lovett M, Clifton SW, Ippolito JE, Glasscock JI, Arumugam M, Brent MR, Gordon JI. Molecular properties of adult mouse gastric and intestinal epithelial progenitors in their niches. The Journal of Biological Chemistry. 281: 11292-300. PMID 16464855 DOI: 10.1074/Jbc.M512118200 |
0.782 |
|
| 2006 |
Zhang X, Stappenbeck TS, White AC, Lavine KJ, Gordon JI, Ornitz DM. Reciprocal epithelial-mesenchymal FGF signaling is required for cecal development. Development (Cambridge, England). 133: 173-80. PMID 16308329 DOI: 10.1242/Dev.02175 |
0.581 |
|
| 2005 |
Pull SL, Doherty JM, Mills JC, Gordon JI, Stappenbeck TS. Activated macrophages are an adaptive element of the colonic epithelial progenitor niche necessary for regenerative responses to injury. Proceedings of the National Academy of Sciences of the United States of America. 102: 99-104. PMID 15615857 DOI: 10.1073/Pnas.0405979102 |
0.646 |
|
| 2003 |
Mills JC, Andersson N, Stappenbeck TS, Chen CC, Gordon JI. Molecular characterization of mouse gastric zymogenic cells. The Journal of Biological Chemistry. 278: 46138-45. PMID 12963718 DOI: 10.1074/Jbc.M308385200 |
0.602 |
|
| 2003 |
Gordon JI, Stappenbeck TS, Hooper LV. Response from Jeffrey I. Gordon et al.: Commensal bacteria make a difference. Trends in Microbiology. 11: 150-1. PMID 12706987 DOI: 10.1016/S0966-842X(03)00044-1 |
0.707 |
|
| 2003 |
Stappenbeck TS, Mills JC, Gordon JI. Molecular features of adult mouse small intestinal epithelial progenitors. Proceedings of the National Academy of Sciences of the United States of America. 100: 1004-9. PMID 12552106 DOI: 10.1073/Pnas.242735899 |
0.647 |
|
| 2003 |
Hooper LV, Stappenbeck TS, Hong CV, Gordon JI. Angiogenins: a new class of microbicidal proteins involved in innate immunity. Nature Immunology. 4: 269-73. PMID 12548285 DOI: 10.1038/Ni888 |
0.738 |
|
| 2002 |
Stappenbeck TS, Hooper LV, Gordon JI. Developmental regulation of intestinal angiogenesis by indigenous microbes via Paneth cells. Proceedings of the National Academy of Sciences of the United States of America. 99: 15451-5. PMID 12432102 DOI: 10.1073/Pnas.202604299 |
0.753 |
|
| 2002 |
Stappenbeck TS, Hooper LV, Manchester JK, Wong MH, Gordon JI. Laser capture microdissection of mouse intestine: characterizing mRNA and protein expression, and profiling intermediary metabolism in specified cell populations. Methods in Enzymology. 356: 167-96. PMID 12418197 DOI: 10.1016/S0076-6879(02)56932-9 |
0.719 |
|
| 2002 |
Mills JC, Andersson N, Hong CV, Stappenbeck TS, Gordon JI. Molecular characterization of mouse gastric epithelial progenitor cells. Proceedings of the National Academy of Sciences of the United States of America. 99: 14819-24. PMID 12409607 DOI: 10.1073/Pnas.192574799 |
0.625 |
|
| 2002 |
Hooper LV, Mills JC, Roth KA, Stappenbeck TS, Wong MH, Gordon JI. 29 Combining gnotobiotic mouse models with functional genomics to define the impact of the microflora on host physiology Methods in Microbiology. 31: 559-589. DOI: 10.1016/S0580-9517(02)31030-4 |
0.622 |
|
| 2001 |
Hurov JB, Stappenbeck TS, Zmasek CM, White LS, Ranganath SH, Russell JH, Chan AC, Murphy KM, Piwnica-Worms H. Immune system dysfunction and autoimmune disease in mice lacking Emk (Par-1) protein kinase. Molecular and Cellular Biology. 21: 3206-19. PMID 11287624 DOI: 10.1128/Mcb.21.9.3206-3219.2001 |
0.383 |
|
| 2000 |
Wong MH, Saam JR, Stappenbeck TS, Rexer CH, Gordon JI. Genetic mosaic analysis based on Cre recombinase and navigated laser capture microdissection Proceedings of the National Academy of Sciences of the United States of America. 97: 12601-12606. PMID 11050178 DOI: 10.1073/Pnas.230237997 |
0.43 |
|
| 1999 |
Wong MH, Stappenbeck TS, Gordon JI. Living and commuting in intestinal crypts Gastroenterology. 116: 208-210. PMID 9869619 DOI: 10.1016/S0016-5085(99)70245-3 |
0.352 |
|
| 1998 |
Stappenbeck TS, Wong MH, Saam JR, Mysorekar IU, Gordon JI. Notes from some crypt watchers: regulation of renewal in the mouse intestinal epithelium. Current Opinion in Cell Biology. 10: 702-9. PMID 9914172 DOI: 10.1016/S0955-0674(98)80110-5 |
0.729 |
|
| 1996 |
Bornslaeger EA, Corcoran CM, Stappenbeck TS, Green KJ. Breaking the connection: Displacement of the desmosomal plaque protein desmoplakin from cell-cell interfaces disrupts anchorage of intermediate filament bundles and alters intercellular junction assembly Journal of Cell Biology. 134: 985-1001. PMID 8769422 DOI: 10.1083/Jcb.134.4.985 |
0.501 |
|
| 1994 |
Kowalczyk AP, Stappenbeck TS, Parry DA, Palka HL, Virata ML, Bornslaeger EA, Nilles LA, Green KJ. Structure and function of desmosomal transmembrane core and plaque molecules. Biophysical Chemistry. 50: 97-112. PMID 8011944 DOI: 10.1016/0301-4622(94)85023-2 |
0.481 |
|
| 1994 |
Stappenbeck TS, Lamb JA, Corcoran CM, Green KJ. Phosphorylation of the desmoplakin COOH terminus negatively regulates its interaction with keratin intermediate filament networks Journal of Biological Chemistry. 269: 29351-29354. PMID 7525582 |
0.485 |
|
| 1993 |
Stappenbeck TS, Bornslaeger EA, Corcoran CM, Luu HH, Virata MLA, Green KJ. Functional analysis of desmoplakin domains: Specification of the interaction with keratin versus vimentin intermediate filament networks Journal of Cell Biology. 123: 691-705. PMID 7693716 DOI: 10.1083/Jcb.123.3.691 |
0.489 |
|
| 1992 |
Stappenbeck TS, Green KJ. The desmoplakin carboxyl terminus coaligns with and specifically disrupts intermediate filament networks when expressed in cultured cells Journal of Cell Biology. 116: 1197-1209. PMID 1740472 DOI: 10.1083/Jcb.116.5.1197 |
0.492 |
|
| 1992 |
Green KJ, Stappenbeck TS, Parry DAD, Virata MLA. Structure of desmoplakin and its association with intermediate filaments Journal of Dermatology. 19: 765-769. PMID 1293163 DOI: 10.1111/J.1346-8138.1992.Tb03777.X |
0.459 |
|
| 1991 |
Green KJ, Stappenbeck TS, Noguchi S, Oyasu R, Nilles LA. Desmoplakin expression and distribution in cultured rat bladder epithelial cells of varying tumorigenic potential Experimental Cell Research. 193: 134-143. PMID 1995289 DOI: 10.1016/0014-4827(91)90547-8 |
0.52 |
|
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