Claes Wahlestedt - Related publications

Affiliations: 
Neuroscience Scripps Florida, Jupiter, FL, United States 
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50 most relevant papers in past 60 days:
Year Citation  Score
2019 He Y, Liu C, Song P, Pang Z, Mo Z, Huang C, Yan T, Sun M, Fa X. Investigation of miRNA- and lncRNA-mediated competing endogenous RNA network in cholangiocarcinoma. Oncology Letters. 18: 5283-5293. PMID 31612038 DOI: 10.3892/ol.2019.10852   
2019 Brązert M, Kranc W, Celichowski P, Ożegowska K, Budna-Tukan J, Jeseta M, Pawelczyk L, Bruska M, Zabel M, Nowicki M, Kempisty B. Novel markers of human ovarian granulosa cell differentiation toward osteoblast lineage: A microarray approach. Molecular Medicine Reports. 20: 4403-4414. PMID 31702034 DOI: 10.3892/mmr.2019.10709   
2019 Slutskin IV, Weinberger A, Segal E. Sequence determinants of polyadenylation-mediated regulation. Genome Research. PMID 31530582 DOI: 10.1101/gr.247312.118   
2019 Hu L, Zhao Y, Niu D, Gong X, Yang R. De novo transcriptome sequencing and differential gene expression analysis of two parasitic human Demodex species. Parasitology Research. PMID 31691855 DOI: 10.1007/s00436-019-06461-0   
2019 Maciel LF, Morales-Vicente DA, Silveira GO, Ribeiro RO, Olberg GGO, Pires DS, Amaral MS, Verjovski-Almeida S. Weighted Gene Co-Expression Analyses Point to Long Non-Coding RNA Hub Genes at Different Life-Cycle Stages. Frontiers in Genetics. 10: 823. PMID 31572441 DOI: 10.3389/fgene.2019.00823   
2019 Hu Z, Wu J, Qin L, Jin H, Lv Y, Zhang R, Xiao C, Cao Y, Zhao Y. effect on Yan Yellow Cattle preadipocyte differentiation. Animal Biotechnology. 1-10. PMID 31646946 DOI: 10.1080/10495398.2019.1679824   
2019 Posner R, Laubenbacher R. Connecting the molecular function of microRNAs to cell differentiation dynamics. Journal of the Royal Society, Interface. 16: 20190437. PMID 31551049 DOI: 10.1098/rsif.2019.0437   
2019 Holly JMP, Biernacka K, Perks CM. The Neglected Insulin: IGF-II, a Metabolic Regulator with Implications for Diabetes, Obesity, and Cancer. Cells. 8. PMID 31590432 DOI: 10.3390/cells8101207   
2019 Cleuren ACA, van der Ent MA, Jiang H, Hunker KL, Yee A, Siemieniak DR, Molema G, Aird WC, Ganesh SK, Ginsburg D. The in vivo endothelial cell translatome is highly heterogeneous across vascular beds. Proceedings of the National Academy of Sciences of the United States of America. PMID 31712416 DOI: 10.1073/pnas.1912409116   
2019 Bordoy AE, O'Connor NJ, Chatterjee A. Construction of two-input logic gates using Transcriptional Interference. Acs Synthetic Biology. PMID 31532632 DOI: 10.1021/acssynbio.9b00321   
2019 Barresi V, Cosentini I, Scuderi C, Napoli S, Di Bella V, Spampinato G, Condorelli DF. Fusion Transcripts of Adjacent Genes: New Insights into the World of Human Complex Transcripts in Cancer. International Journal of Molecular Sciences. 20. PMID 31652751 DOI: 10.3390/ijms20215252   
2019 Ivanov Öfverholm I, Zachariadis V, Taylan F, Marincevic-Zuniga Y, Tran AN, Saft L, Nilsson D, Syvänen AC, Lönnerholm G, Harila-Saari A, Nordenskjöld M, Heyman M, Nordgren A, Nordlund J, Barbany G. Overexpression of chromatin remodeling and tyrosine kinase genes in iAMP21-positive acute lymphoblastic leukemia. Leukemia & Lymphoma. 1-10. PMID 31640433 DOI: 10.1080/10428194.2019.1678153   
2019 Martuscello RT, Kerridge CA, Chatterjee D, Hartstone WG, Kuo SH, Sims PA, Louis ED, Faust PL. Gene Expression Analysis of the Cerebellar Cortex in Essential Tremor. Neuroscience Letters. 134540. PMID 31707044 DOI: 10.1016/j.neulet.2019.134540   
2019 Liu YP, Wu X, Meng JH, Ding M, Xu FL, Zhang JJ, Yao J, Wang BJ. Transcription Factor CEBPB Inhibits the Expression of the Human by Binding to 5' Regulatory Region in Vitro. Genes. 10. PMID 31614865 DOI: 10.3390/genes10100802   
2019 Gamble J, Chick J, Seltzer K, Graber J, Gygi S, Braun R, Snyder E. An expanded mouse testis transcriptome and mass spectrometry defines novel proteins. Reproduction (Cambridge, England). PMID 31677600 DOI: 10.1530/REP-19-0092   
2019 Abbas MN, Hanghua L, Kausar S, Dong Z, Cui H. Zinc finger protein RP-8, the Bombyx mori ortholog of programmed cell death 2, regulates cell proliferation. Developmental and Comparative Immunology. 103542. PMID 31730828 DOI: 10.1016/j.dci.2019.103542   
2019 Akkouh IA, Skrede S, Holmgren A, Ersland KM, Hansson L, Bahrami S, Andreassen OA, Steen VM, Djurovic S, Hughes T. Exploring lithium's transcriptional mechanisms of action in bipolar disorder: a multi-step study. Neuropsychopharmacology : Official Publication of the American College of Neuropsychopharmacology. PMID 31652432 DOI: 10.1038/s41386-019-0556-8   
2019 Papatheodorou I, Moreno P, Manning J, Fuentes AM, George N, Fexova S, Fonseca NA, Füllgrabe A, Green M, Huang N, Huerta L, Iqbal H, Jianu M, Mohammed S, Zhao L, et al. Expression Atlas update: from tissues to single cells. Nucleic Acids Research. PMID 31665515 DOI: 10.1093/nar/gkz947   
2019 Morera AA, Ahmed NS, Schwartz JC. TDP-43 regulates transcription at protein-coding genes and Alu retrotransposons. Biochimica Et Biophysica Acta. Gene Regulatory Mechanisms. 194434. PMID 31655156 DOI: 10.1016/j.bbagrm.2019.194434   
2019 Inoue F, Kreimer A, Ashuach T, Ahituv N, Yosef N. Identification and Massively Parallel Characterization of Regulatory Elements Driving Neural Induction. Cell Stem Cell. PMID 31631012 DOI: 10.1016/j.stem.2019.09.010   
2019 Zhang L, Liu M, Li Q, Shen B, Hu C, Fu R, Liu M, Deng J, Cao Q, Wang Y, Wang Y. Identification of differential gene expression in endothelial cells from young and aged mice using RNA-Seq technique. American Journal of Translational Research. 11: 6553-6560. PMID 31737206   
2019 Wang K, Wang D, Zheng X, Qin A, Zhou J, Guo B, Chen Y, Wen X, Ye W, Zhou Y, Zhu Y. Multi-strategic RNA-seq analysis reveals a high-resolution transcriptional landscape in cotton. Nature Communications. 10: 4714. PMID 31624240 DOI: 10.1038/s41467-019-12575-x   
2019 Oliver GR, Tang X, Schultz-Rogers LE, Vidal-Folch N, Jenkinson WG, Schwab TL, Gaonkar K, Cousin MA, Nair A, Basu S, Chanana P, Oglesbee D, Klee EW. A tailored approach to fusion transcript identification increases diagnosis of rare inherited disease. Plos One. 14: e0223337. PMID 31577830 DOI: 10.1371/journal.pone.0223337   
2019 Wang F, Liang S, Kumar T, Navin N, Chen K. SCMarker: Ab initio marker selection for single cell transcriptome profiling. Plos Computational Biology. 15: e1007445. PMID 31658262 DOI: 10.1371/journal.pcbi.1007445   
2019 Liew LC, Narsai R, Wang Y, Berkowitz O, Whelan J, Lewsey MG. Temporal tissue-specific regulation of transcriptomes during barley (Hordeum vulgare) seed germination. The Plant Journal : For Cell and Molecular Biology. PMID 31628689 DOI: 10.1111/tpj.14574   
2019 Farber JE, Lane RP. Bioinformatics Discovery of Putative Enhancers within Mouse Odorant Receptor Gene Clusters. Chemical Senses. PMID 31529021 DOI: 10.1093/chemse/bjz043   
2019 Xu Y, Chen L, Liu M, Lu Y, Yue Y, Liu Y, Chen H, Xie F, Zhang C. High-throughput transcriptome sequencing reveals extremely high doses of ionizing radiation-response genes in . Toxicology Research. 8: 754-766. PMID 31588352 DOI: 10.1039/c9tx00101h   
2019 Zhang L, Gao X, Zhou X, Qin Z, Wang Y, Li R, Tang M, Wang W, Zhang W. Identification of key genes and microRNAs involved in kidney Wilms tumor by integrated bioinformatics analysis. Experimental and Therapeutic Medicine. 18: 2554-2564. PMID 31555364 DOI: 10.3892/etm.2019.7870   
2019 Zhang W, Zhu J, He X, Liu X, Li J, Li W, Yang P, Wang J, Hu K, Zhang X, Li X, Jing H. Exosome complex genes mediate RNA degradation and predict survival in mantle cell lymphoma. Oncology Letters. 18: 5119-5128. PMID 31612023 DOI: 10.3892/ol.2019.10850   
2019 Salavati M, Bush SJ, Palma-Vera S, McCulloch MEB, Hume DA, Clark EL. Elimination of Reference Mapping Bias Reveals Robust Immune Related Allele-Specific Expression in Crossbred Sheep. Frontiers in Genetics. 10: 863. PMID 31608110 DOI: 10.3389/fgene.2019.00863   
2019 Mathiyalagan N, Miles LB, Anderson PJ, Wilanowski T, Grills BL, McDonald SJ, Keightley MC, Charzynska A, Dabrowski M, Dworkin S. Meta-Analysis of Dependent Transcriptional Networks: A Roadmap for Identifying Novel Conserved Genetic Pathways. Genes. 10. PMID 31683705 DOI: 10.3390/genes10110876   
2019 Zhou C, Rao X, Wang H, Zeng B, Yu Y, Chen J, Zhong J, Qi X, Zeng L, Zheng P, Hong W, Xie P. Hippocampus-specific regulation of long non-coding RNA and mRNA expression in germ-free mice. Functional & Integrative Genomics. PMID 31677064 DOI: 10.1007/s10142-019-00716-w   
2019 Wang Z, Feng X, Li SC. SCDevDB: A Database for Insights Into Single-Cell Gene Expression Profiles During Human Developmental Processes. Frontiers in Genetics. 10: 903. PMID 31611909 DOI: 10.3389/fgene.2019.00903   
2019 Pomaznoy M, Sethi A, Greenbaum J, Peters B. Identifying inaccuracies in gene expression estimates from unstranded RNA-seq data. Scientific Reports. 9: 16342. PMID 31704962 DOI: 10.1038/s41598-019-52584-w   
2019 Wan Z, Zhang X, Luo Y, Zhao B. Identification of Hepatocellular Carcinoma-Related Potential Genes and Pathways Through Bioinformatic-Based Analyses. Genetic Testing and Molecular Biomarkers. PMID 31633428 DOI: 10.1089/gtmb.2019.0063   
2019 Rosenfeld CS, Hekman JP, Johnson JL, Lyu Z, Ortega MT, Joshi T, Mao J, Vladimirova AV, Gulevich RG, Kharlamova AV, Acland GM, Hecht EE, Wang X, Clark AG, Trut LN, et al. Hypothalamic transcriptome of tame and aggressive silver foxes (Vulpes vulpes) identifies gene expression differences shared across brain regions. Genes, Brain, and Behavior. PMID 31605445 DOI: 10.1111/gbb.12614   
2019 Liu X, Gupta STP, Bhimsaria D, Reed JL, Rodríguez-Martínez JA, Ansari AZ, Raman S. De novo design of programmable inducible promoters. Nucleic Acids Research. PMID 31552424 DOI: 10.1093/nar/gkz772   
2019 Peters KM, Borradaile NM. Microarray data and pathway analyses for human microvascular endothelial cells supplemented with low dose vitamin D or niacin during lipotoxicity. Data in Brief. 26: 104490. PMID 31667254 DOI: 10.1016/j.dib.2019.104490   
2019 Yuan F, Li K, Zhou C, Zhou H, Liu H, Chai H, Lu F, Zhang H. Identification of two novel highly inducible promoters from Bacillus licheniformis by screening transcriptomic data. Genomics. PMID 31678595 DOI: 10.1016/j.ygeno.2019.10.021   
2019 Wang X, Cairns MJ, Yan J. Super-enhancers in transcriptional regulation and genome organization. Nucleic Acids Research. PMID 31724731 DOI: 10.1093/nar/gkz1038   
2019 Fookolaee SP, Karkhah S, Saadi M, Majumdar S, Karkhah A. Novel computational approaches to developing potential STAT4 silencing siRNAs for immunomodulation of atherosclerosis. Current Computer-Aided Drug Design. PMID 31630673 DOI: 10.2174/1573409915666191018125653   
2019 Li X, Qiu D, Chen S, Luo C, Hu D, Zeng J, Chen H, Li S, Yu X. Importance of messenger RNA stability of toxin synthetase genes for monitoring toxic cyanobacterial bloom. Harmful Algae. 88: 101642. PMID 31582157 DOI: 10.1016/j.hal.2019.101642   
2019 Bai HL, Lu ZF, Zhao JJ, Ma X, Li XH, Xu H, Wu SG, Kang CM, Lu JB, Xu YJ, Xiao L, Wu Q, Ye S, Wang Q, Zheng L, et al. Microarray profiling analysis and validation of novel long non-coding RNAs and mRNAs as potential biomarkers and their functions in atherosclerosis. Physiological Genomics. PMID 31682178 DOI: 10.1152/physiolgenomics.00077.2019   
2019 Koning ACAM, Buurstede JC, van Weert LTCM, Meijer OC. Glucocorticoid and Mineralocorticoid Receptors in the Brain: A Transcriptional Perspective. Journal of the Endocrine Society. 3: 1917-1930. PMID 31598572 DOI: 10.1210/js.2019-00158   
2019 Hou Y, Zhang R, Sun X. Enhancer LncRNAs Influence Chromatin Interactions in Different Ways. Frontiers in Genetics. 10: 936. PMID 31681405 DOI: 10.3389/fgene.2019.00936   
2019 Wu Q, Yuan X, Li B, Han R, Zhang H, Xiu R. Integrated exosomal miRNA and transcriptome analysis of brain microvascular endothelial cells in spontaneously hypertensive rats. Hypertension Research : Official Journal of the Japanese Society of Hypertension. PMID 31628439 DOI: 10.1038/s41440-019-0345-0   
2019 Kuppers DA, Arora S, Lim Y, Lim AR, Carter LM, Corrin PD, Plaisier CL, Basom R, Delrow JJ, Wang S, Hansen He H, Torok-Storb B, Hsieh AC, Paddison PJ. N-methyladenosine mRNA marking promotes selective translation of regulons required for human erythropoiesis. Nature Communications. 10: 4596. PMID 31601799 DOI: 10.1038/s41467-019-12518-6   
2019 Deng GX, Xu N, Huang Q, Tan JY, Zhang Z, Li XF, Wei JR. Association between promoter DNA methylation and gene expression in the pathogenesis of ischemic stroke. Aging. 11. PMID 31527307 DOI: 10.18632/aging.102278   
2019 Li XL, Zhang Z, Zhang H. Expression level of TLR9, but not hypomethylation, is correlated with SLE disease activity. Physiological Research. PMID 31647295   
2019 Lin G, Yin G, Yan Y, Lin B. Identification of prognostic biomarkers for malignant melanoma using microarray datasets. Oncology Letters. 18: 5243-5254. PMID 31620197 DOI: 10.3892/ol.2019.10914