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Damien Devos - Publications

Affiliations: 
Structural and Computational Biology European Molecular Biology Laboratory (EMBL), Heidelberg, Baden-Württemberg, Germany 
Website:
http://www.embl.de/research/units/scb/bork/members/index.php?s_personId=4220
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24 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Jansen RLM, Santana-Molina C, van den Noort M, Devos DP, van der Klei IJ. Comparative Genomics of Peroxisome Biogenesis Proteins: Making Sense of the PEX Proteins. Frontiers in Cell and Developmental Biology. 9: 654163. PMID 34095119 DOI: 10.3389/fcell.2021.654163  0.314
2021 Santana-Molina C, Gutierrez F, Devos DP. Homology and modular evolution of CATCHR at the origin of the eukaryotic endomembrane-system. Genome Biology and Evolution. PMID 34061181 DOI: 10.1093/gbe/evab125  0.318
2011 Amlacher S, Sarges P, Flemming D, van Noort V, Kunze R, Devos DP, Arumugam M, Bork P, Hurt E. Insight into structure and assembly of the nuclear pore complex by utilizing the genome of a eukaryotic thermophile. Cell. 146: 277-89. PMID 21784248 DOI: 10.1016/J.Cell.2011.06.039  0.449
2010 Degrasse JA, Devos D. A functional proteomic study of the Trypanosoma brucei nuclear pore complex: an informatic strategy. Methods in Molecular Biology (Clifton, N.J.). 673: 231-8. PMID 20835803 DOI: 10.1007/978-1-60761-842-3_15  0.338
2009 Kühner S, van Noort V, Betts MJ, Leo-Macias A, Batisse C, Rode M, Yamada T, Maier T, Bader S, Beltran-Alvarez P, Castaño-Diez D, Chen WH, Devos D, Güell M, Norambuena T, et al. Proteome organization in a genome-reduced bacterium. Science (New York, N.Y.). 326: 1235-40. PMID 19965468 DOI: 10.1126/Science.1176343  0.49
2009 DeGrasse JA, DuBois KN, Devos D, Siegel TN, Sali A, Field MC, Rout MP, Chait BT. Evidence for a shared nuclear pore complex architecture that is conserved from the last common eukaryotic ancestor. Molecular & Cellular Proteomics : McP. 8: 2119-30. PMID 19525551 DOI: 10.1074/Mcp.M900038-Mcp200  0.387
2009 Croteau NJ, Furgason ML, Devos D, Munson M. Conservation of helical bundle structure between the exocyst subunits. Plos One. 4: e4443. PMID 19214222 DOI: 10.1371/Journal.Pone.0004443  0.388
2008 Sanchez-Pulido L, Devos D, Sung ZR, Calonje M. RAWUL: a new ubiquitin-like domain in PRC1 ring finger proteins that unveils putative plant and worm PRC1 orthologs. Bmc Genomics. 9: 308. PMID 18588675 DOI: 10.1186/1471-2164-9-308  0.406
2008 Taverner T, Hernández H, Sharon M, Ruotolo BT, Matak-Vinkovi? D, Devos D, Russell RB, Robinson CV. Subunit architecture of intact protein complexes from mass spectrometry and homology modeling. Accounts of Chemical Research. 41: 617-27. PMID 18314965 DOI: 10.1021/Ar700218Q  0.391
2007 Alber F, Dokudovskaya S, Veenhoff LM, Zhang W, Kipper J, Devos D, Suprapto A, Karni-Schmidt O, Williams R, Chait BT, Sali A, Rout MP. The molecular architecture of the nuclear pore complex. Nature. 450: 695-701. PMID 18046406 DOI: 10.1038/Nature06405  0.389
2007 Alber F, Dokudovskaya S, Veenhoff LM, Zhang W, Kipper J, Devos D, Suprapto A, Karni-Schmidt O, Williams R, Chait BT, Rout MP, Sali A. Determining the architectures of macromolecular assemblies. Nature. 450: 683-94. PMID 18046405 DOI: 10.1038/Nature06404  0.379
2007 Devos D, Russell RB. A more complete, complexed and structured interactome. Current Opinion in Structural Biology. 17: 370-7. PMID 17574831 DOI: 10.1016/J.Sbi.2007.05.011  0.359
2006 Devos D, Kalinina OV, Russell RB. Harry Potter and the structural biologist's (Key)stone. Genome Biology. 7: 333. PMID 17201936 DOI: 10.1186/Gb-2006-7-12-333  0.364
2006 Dokudovskaya S, Williams R, Devos D, Sali A, Chait BT, Rout MP. Protease accessibility laddering: a proteomic tool for probing protein structure. Structure (London, England : 1993). 14: 653-60. PMID 16615907 DOI: 10.1016/J.Str.2006.02.006  0.401
2006 Devos D, Dokudovskaya S, Williams R, Alber F, Eswar N, Chait BT, Rout MP, Sali A. Simple fold composition and modular architecture of the nuclear pore complex. Proceedings of the National Academy of Sciences of the United States of America. 103: 2172-7. PMID 16461911 DOI: 10.1073/Pnas.0506345103  0.379
2003 Sánchez-Pulido L, Devos D, Genevrois S, Vicente M, Valencia A. POTRA: a conserved domain in the FtsQ family and a class of beta-barrel outer membrane proteins. Trends in Biochemical Sciences. 28: 523-6. PMID 14559180 DOI: 10.1016/J.Tibs.2003.08.003  0.331
2003 Balsera M, Arellano JB, Pazos F, Devos D, Valencia A, De Las Rivas J. The single tryptophan of the PsbQ protein of photosystem II is at the end of a 4-alpha-helical bundle domain. European Journal of Biochemistry / Febs. 270: 3916-27. PMID 14511373 DOI: 10.1046/J.1432-1033.2003.03774.X  0.37
2003 Iliopoulos I, Tsoka S, Andrade MA, Enright AJ, Carroll M, Poullet P, Promponas V, Liakopoulos T, Palaios G, Pasquier C, Hamodrakas S, Tamames J, Yagnik AT, Tramontano A, Devos D, et al. Evaluation of annotation strategies using an entire genome sequence. Bioinformatics (Oxford, England). 19: 717-26. PMID 12691983 DOI: 10.1093/Bioinformatics/Btg077  0.303
2002 Sánchez-Pulido L, Devos D, Valencia A. BRICHOS: a conserved domain in proteins associated with dementia, respiratory distress and cancer. Trends in Biochemical Sciences. 27: 329-32. PMID 12114016 DOI: 10.1016/S0968-0004(02)02134-5  0.336
2002 Jensen LJ, Gupta R, Blom N, Devos D, Tamames J, Kesmir C, Nielsen H, Staerfeldt HH, Rapacki K, Workman C, Andersen CA, Knudsen S, Krogh A, Valencia A, Brunak S. Prediction of human protein function from post-translational modifications and localization features. Journal of Molecular Biology. 319: 1257-65. PMID 12079362 DOI: 10.1016/S0022-2836(02)00379-0  0.367
2002 Devos D, Garmendia J, De Lorenzo V, Valencia A. Deciphering the action of aromatic effectors on the prokaryotic enhancer-binding protein XylR: A structural model of its N-terminal domain Environmental Microbiology. 4: 29-41. PMID 11966823 DOI: 10.1046/J.1462-2920.2002.00265.X  0.375
2001 Garmendia J, Devos D, Valencia A, De Lorenzo V. À la carte transcriptional regulators: Unlocking responses of the prokaryotic enhancer-binding protein XylR to non-natural effectors Molecular Microbiology. 42: 47-59. PMID 11679066 DOI: 10.1046/J.1365-2958.2001.02633.X  0.359
2001 Devos D, Valencia A. Intrinsic errors in genome annotation Trends in Genetics. 17: 429-431. PMID 11485799 DOI: 10.1016/S0168-9525(01)02348-4  0.321
2000 Devos D, Valencia A. Practical limits of function prediction Proteins: Structure, Function and Genetics. 41: 98-107. PMID 10944397 DOI: 10.1002/1097-0134(20001001)41:1<98::Aid-Prot120>3.0.Co;2-S  0.361
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