| Year |
Citation |
Score |
| 2017 |
Bargaje R, Trachana K, Shelton MN, McGinnis CS, Zhou JX, Chadick C, Cook S, Cavanaugh C, Huang S, Hood L. Cell population structure prior to bifurcation predicts efficiency of directed differentiation in human induced pluripotent cells. Proceedings of the National Academy of Sciences of the United States of America. PMID 28167799 DOI: 10.1073/Pnas.1621412114 |
0.312 |
|
| 2016 |
Mojtahedi M, Skupin A, Zhou J, Castaño IG, Leong-Quong RY, Chang H, Trachana K, Giuliani A, Huang S. Cell Fate Decision as High-Dimensional Critical State Transition. Plos Biology. 14: e2000640. PMID 28027308 DOI: 10.1371/Journal.Pbio.2000640 |
0.311 |
|
| 2014 |
Trachana K, Forslund K, Larsson T, Powell S, Doerks T, von Mering C, Bork P. A phylogeny-based benchmarking test for orthology inference reveals the limitations of function-based validation. Plos One. 9: e111122. PMID 25369365 DOI: 10.1371/Journal.Pone.0111122 |
0.727 |
|
| 2014 |
Powell S, Forslund K, Szklarczyk D, Trachana K, Roth A, Huerta-Cepas J, Gabaldón T, Rattei T, Creevey C, Kuhn M, Jensen LJ, von Mering C, Bork P. eggNOG v4.0: nested orthology inference across 3686 organisms. Nucleic Acids Research. 42: D231-9. PMID 24297252 DOI: 10.1093/Nar/Gkt1253 |
0.73 |
|
| 2012 |
Chen WH, Trachana K, Lercher MJ, Bork P. Younger genes are less likely to be essential than older genes, and duplicates are less likely to be essential than singletons of the same age. Molecular Biology and Evolution. 29: 1703-6. PMID 22319151 DOI: 10.1093/Molbev/Mss014 |
0.629 |
|
| 2012 |
Powell S, Szklarczyk D, Trachana K, Roth A, Kuhn M, Muller J, Arnold R, Rattei T, Letunic I, Doerks T, Jensen LJ, von Mering C, Bork P. eggNOG v3.0: orthologous groups covering 1133 organisms at 41 different taxonomic ranges. Nucleic Acids Research. 40: D284-9. PMID 22096231 DOI: 10.1093/Nar/Gkr1060 |
0.638 |
|
| 2011 |
Trachana K, Larsson TA, Powell S, Chen WH, Doerks T, Muller J, Bork P. Orthology prediction methods: a quality assessment using curated protein families. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 33: 769-80. PMID 21853451 DOI: 10.1002/Bies.201100062 |
0.697 |
|
| 2010 |
Trachana K, Jensen LJ, Bork P. Evolution and regulation of cellular periodic processes: a role for paralogues. Embo Reports. 11: 233-8. PMID 20168326 DOI: 10.1038/Embor.2010.9 |
0.603 |
|
| 2010 |
Christodoulou F, Raible F, Tomer R, Simakov O, Trachana K, Klaus S, Snyman H, Hannon GJ, Bork P, Arendt D. Ancient animal microRNAs and the evolution of tissue identity. Nature. 463: 1084-8. PMID 20118916 DOI: 10.1038/Nature08744 |
0.661 |
|
| 2009 |
Papanikolaou N, Trachana K, Theodosiou T, Promponas VJ, Iliopoulos I. Gene socialization: gene order, GC content and gene silencing in Salmonella. Bmc Genomics. 10: 597. PMID 20003346 DOI: 10.1186/1471-2164-10-597 |
0.485 |
|
| Show low-probability matches. |