Yin Shen - Publications

Affiliations: 
Wuhan University, Wuhan Shi, Hubei Sheng, China 
Area:
visual system

39 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Wutikeli H, Yu Y, Zhang T, Cao J, Nawy S, Shen Y. Role of Elavl-like RNA-binding protein in retinal development and signal transduction. Biochimica Et Biophysica Acta. Molecular Basis of Disease. 1871: 167518. PMID 39307290 DOI: 10.1016/j.bbadis.2024.167518  0.685
2024 Li B, Pu Z, Liao K, Du Y, Tan G, Nawy S, Gao S, Shen Y. Overexpression of Bmp4 induces microphthalmia by disrupting embryonic neural retina. Neurobiology of Disease. 106654. PMID 39216769 DOI: 10.1016/j.nbd.2024.106654  0.679
2024 Liu D, Pu Z, Li B, Tan G, Xie T, Shen Y. Chrdl1-mediated BMP4 inhibition disrupts the balance between retinal neurons and Müller Glia. Cell Death Discovery. 10: 367. PMID 39152126 DOI: 10.1038/s41420-024-02129-6  0.312
2024 Li B, Xie T, Nawy S, Shen Y. The development and the genetic diseases of the ciliary body. Cell Insight. 3: 100162. PMID 38595769 DOI: 10.1016/j.cellin.2024.100162  0.603
2021 Huang X, Tong Y, Qi CX, Xu YT, Dan HD, Deng QQ, Shen Y. Mapping Regional Homogeneity and Functional Connectivity of the Visual Cortex in Resting-State fMRI. Journal of Visualized Experiments : Jove. PMID 34487114 DOI: 10.3791/60305  0.287
2021 Li Y, Shen Y, Cai D, Shen Y. Sox2 Knockdown in the Neonatal Retina Causes Cell Fate to Switch from Amacrine to Bipolar. Brain Research. 147265. PMID 33422527 DOI: 10.1016/j.brainres.2020.147265  0.343
2021 Gorkin DU, Barozzi I, Zhao Y, Zhang Y, Huang H, Lee AY, Li B, Chiou J, Wildberg A, Ding B, Zhang B, Wang M, Strattan JS, Davidson JM, Qiu Y, ... ... Shen Y, et al. Author Correction: An atlas of dynamic chromatin landscapes in mouse fetal development. Nature. PMID 33398137 DOI: 10.1038/s41586-020-03089-4  0.229
2020 Gorkin DU, Barozzi I, Zhao Y, Zhang Y, Huang H, Lee AY, Li B, Chiou J, Wildberg A, Ding B, Zhang B, Wang M, Strattan JS, Davidson JM, Qiu Y, ... ... Shen Y, et al. Author Correction: An atlas of dynamic chromatin landscapes in mouse fetal development. Nature. PMID 33037424 DOI: 10.1038/s41586-020-2841-4  0.229
2020 Moore JE, Purcaro MJ, Pratt HE, Epstein CB, Shoresh N, Adrian J, Kawli T, Davis CA, Dobin A, Kaul R, Halow J, Van Nostrand EL, Freese P, Gorkin DU, Shen Y, et al. Expanded encyclopaedias of DNA elements in the human and mouse genomes. Nature. 583: 699-710. PMID 32728249 DOI: 10.1038/S41586-020-2493-4  0.305
2020 Gorkin DU, Barozzi I, Zhao Y, Zhang Y, Huang H, Lee AY, Li B, Chiou J, Wildberg A, Ding B, Zhang B, Wang M, Strattan JS, Davidson JM, Qiu Y, ... Shen Y, et al. An atlas of dynamic chromatin landscapes in mouse fetal development. Nature. 583: 744-751. PMID 32728240 DOI: 10.1038/S41586-020-2093-3  0.293
2020 Xiao D, Deng Q, Guo Y, Huang X, Zou M, Zhong J, Rao P, Xu Z, Liu Y, Hu Y, Shen Y, Jin K, Xiang M. Generation of self-organized sensory ganglion organoids and retinal ganglion cells from fibroblasts. Science Advances. 6: eaaz5858. PMID 32523990 DOI: 10.1126/Sciadv.Aaz5858  0.357
2019 Shen Y, Luo X, Liu S, Shen Y, Nawy S, Shen Y. Rod bipolar cells dysfunction occurs before ganglion cells loss in excitotoxin-damaged mouse retina. Cell Death & Disease. 10: 905. PMID 31787761 DOI: 10.1038/s41419-019-2140-x  0.693
2019 Jiang MN, Ma XY, Zhao QQ, Li Y, Xing YQ, Deng QQ, Shen Y. The neuroprotective effects of novel estrogen receptor GPER1 in mouse retinal ganglion cell degeneration. Experimental Eye Research. 107826. PMID 31586450 DOI: 10.1016/J.Exer.2019.107826  0.417
2019 Song M, Yang X, Ren X, Maliskova L, Li B, Jones IR, Wang C, Jacob F, Wu K, Traglia M, Tam TW, Jamieson K, Lu SY, Ming GL, Li Y, ... ... Shen Y, et al. Mapping cis-regulatory chromatin contacts in neural cells links neuropsychiatric disorder risk variants to target genes. Nature Genetics. 51: 1252-1262. PMID 31367015 DOI: 10.1038/S41588-019-0472-1  0.35
2019 Gao Q, Liu Y, Lei X, Deng Q, Tong Y, Du L, Shen Y. A Novel CNGA1 Gene Mutation (c.G622A) of Autosomal Recessive Retinitis Pigmentosa Leads to the CNGA1 Protein Reduction on Membrane. Biochemical Genetics. PMID 30652268 DOI: 10.1007/S10528-019-09907-3  0.312
2018 Liu S, Chen Y, Chen Z, Xing Y, Shen Y. Immunohistochemical profile of long-standing traumatic retinal detachment in atrophic globe in a young patient. Experimental and Therapeutic Medicine. 16: 2387-2391. PMID 30186481 DOI: 10.3892/Etm.2018.6497  0.391
2017 Chen Y, Luo X, Liu S, Shen Y. Neuroprotective effect of cannabinoid receptor 1 antagonist in the MNU-induced retinal degeneration model. Experimental Eye Research. PMID 29126840 DOI: 10.1016/J.Exer.2017.11.001  0.424
2017 He Y, Gorkin DU, Dickel DE, Nery JR, Castanon RG, Lee AY, Shen Y, Visel A, Pennacchio LA, Ren B, Ecker JR. Improved regulatory element prediction based on tissue-specific local epigenomic signatures. Proceedings of the National Academy of Sciences of the United States of America. PMID 28193886 DOI: 10.1073/Pnas.1618353114  0.304
2015 Dixon JR, Jung I, Selvaraj S, Shen Y, Antosiewicz-Bourget JE, Lee AY, Ye Z, Kim A, Rajagopal N, Xie W, Diao Y, Liang J, Zhao H, Lobanenkov VV, Ecker JR, et al. Chromatin architecture reorganization during stem cell differentiation. Nature. 518: 331-6. PMID 25693564 DOI: 10.1038/Nature14222  0.331
2014 Yue F, Cheng Y, Breschi A, Vierstra J, Wu W, Ryba T, Sandstrom R, Ma Z, Davis C, Pope BD, Shen Y, Pervouchine DD, Djebali S, Thurman RE, Kaul R, et al. A comparative encyclopedia of DNA elements in the mouse genome. Nature. 515: 355-64. PMID 25409824 DOI: 10.1038/Nature13992  0.691
2014 Li Z, He T, Du K, Xing YQ, Run YM, Yan Y, Shen Y. Inhibition of oxygen-induced ischemic retinal neovascularization with adenoviral 15-lipoxygenase-1 gene transfer via up-regulation of PPAR-γ and down-regulation of VEGFR-2 expression. Plos One. 9: e85824. PMID 24465728 DOI: 10.1371/Journal.Pone.0085824  0.389
2013 Hon GC, Rajagopal N, Shen Y, McCleary DF, Yue F, Dang MD, Ren B. Epigenetic memory at embryonic enhancers identified in DNA methylation maps from adult mouse tissues. Nature Genetics. 45: 1198-206. PMID 23995138 DOI: 10.1038/Ng.2746  0.279
2013 Yan Y, He T, Shen Y, Chen X, Diao B, Li Z, Zhou F, Xing YQ. Modeling of diseases of retinal ischemia in vitro: possible participation of autocrine vascular endothelial growth factor signaling. Ophthalmic Research. 49: 90-9. PMID 23257772 DOI: 10.1159/000343254  0.304
2013 Fan W, Xing Y, Zhong Y, Chen C, Shen Y. Expression of NMDA receptor subunit 1 in the rat retina. Acta Histochemica. 115: 42-7. PMID 22512920 DOI: 10.1016/J.Acthis.2012.03.005  0.41
2012 Peachey NS, Pearring JN, Bojang P, Hirschtritt ME, Sturgill-Short G, Ray TA, Furukawa T, Koike C, Goldberg AF, Shen Y, McCall MA, Nawy S, Nishina PM, Gregg RG. Depolarizing bipolar cell dysfunction due to a Trpm1 point mutation. Journal of Neurophysiology. 108: 2442-51. PMID 22896717 DOI: 10.1152/Jn.00137.2012  0.671
2012 Stamatoyannopoulos JA, Snyder M, Hardison R, Ren B, Gingeras T, Gilbert DM, Groudine M, Bender M, Kaul R, Canfield T, Giste E, Johnson A, Zhang M, Balasundaram G, ... Shen Y, et al. An encyclopedia of mouse DNA elements (Mouse ENCODE). Genome Biology. 13: 418. PMID 22889292 DOI: 10.1186/Gb-2012-13-8-418  0.463
2012 Shen Y, Yue F, McCleary DF, Ye Z, Edsall L, Kuan S, Wagner U, Dixon J, Lee L, Lobanenkov VV, Ren B. A map of the cis-regulatory sequences in the mouse genome. Nature. 488: 116-20. PMID 22763441 DOI: 10.1038/Nature11243  0.306
2012 Yu M, Hon GC, Szulwach KE, Song CX, Zhang L, Kim A, Li X, Dai Q, Shen Y, Park B, Min JH, Jin P, Ren B, He C. Base-resolution analysis of 5-hydroxymethylcytosine in the mammalian genome. Cell. 149: 1368-80. PMID 22608086 DOI: 10.1016/J.Cell.2012.04.027  0.274
2012 Shen Y, Rampino MA, Carroll RC, Nawy S. G-protein-mediated inhibition of the Trp channel TRPM1 requires the Gβγ dimer. Proceedings of the National Academy of Sciences of the United States of America. 109: 8752-7. PMID 22586107 DOI: 10.1073/Pnas.1117433109  0.685
2012 Dixon JR, Selvaraj S, Yue F, Kim A, Li Y, Shen Y, Hu M, Liu JS, Ren B. Topological domains in mammalian genomes identified by analysis of chromatin interactions. Nature. 485: 376-80. PMID 22495300 DOI: 10.1038/Nature11082  0.289
2012 Hunkapiller J, Shen Y, Diaz A, Cagney G, McCleary D, Ramalho-Santos M, Krogan N, Ren B, Song JS, Reiter JF. Polycomb-like 3 promotes polycomb repressive complex 2 binding to CpG islands and embryonic stem cell self-renewal. Plos Genetics. 8: e1002576. PMID 22438827 DOI: 10.1371/Journal.Pgen.1002576  0.297
2011 Pearring JN, Bojang P, Shen Y, Koike C, Furukawa T, Nawy S, Gregg RG. A role for nyctalopin, a small leucine-rich repeat protein, in localizing the TRP melastatin 1 channel to retinal depolarizing bipolar cell dendrites. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 10060-6. PMID 21734298 DOI: 10.1523/Jneurosci.1014-11.2011  0.7
2009 Shen Y, Heimel JA, Kamermans M, Peachey NS, Gregg RG, Nawy S. A transient receptor potential-like channel mediates synaptic transmission in rod bipolar cells. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 29: 6088-93. PMID 19439586 DOI: 10.1523/Jneurosci.0132-09.2009  0.704
2008 Snellman J, Kaur T, Shen Y, Nawy S. Regulation of ON bipolar cell activity. Progress in Retinal and Eye Research. 27: 450-63. PMID 18524666 DOI: 10.1016/J.Preteyeres.2008.03.003  0.701
2006 Shen Y, Liu XL, Yang XL. N-methyl-D-aspartate receptors in the retina. Molecular Neurobiology. 34: 163-79. PMID 17308350 DOI: 10.1385/Mn:34:3:163  0.643
2006 Shen Y, Zhang M, Jin Y, Yang XL. Functional N-methyl-D-aspartate receptors are expressed in cone-driven horizontal cells in carp retina. Neuro-Signals. 15: 174-9. PMID 17047395 DOI: 10.1159/000096350  0.606
2005 Shen Y, Chen L, Ping Y, Yang XL. Glycine modulates the center response of ON type rod-dominant bipolar cells in carp retina. Brain Research Bulletin. 67: 492-7. PMID 16216698 DOI: 10.1016/J.Brainresbull.2005.07.013  0.647
2004 Huang H, Luo DG, Shen Y, Zhang AJ, Yang R, Yang XL. AMPA receptor is involved in transmission of cone signal to ON bipolar cells in carp retina. Brain Research. 1002: 86-93. PMID 14988037 DOI: 10.1016/J.Brainres.2003.12.019  0.72
2003 Shen Y, Zhang AJ, Yang XL. Uncoupling of horizontal cells alters the receptive fields of retinal bipolar cells. Neuroreport. 14: 2159-62. PMID 14625439 DOI: 10.1097/00001756-200312020-00005  0.643
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