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Masahito Yamagata - Publications

Affiliations: 
Harvard University, Cambridge, MA, United States 
Area:
synapse formation
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45 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Yamagata M, Sanes JR. CRISPR-mediated Labeling of Cells in Chick Embryos Based on Selectively Expressed Genes. Bio-Protocol. 11: e4105. PMID 34458399 DOI: 10.21769/BioProtoc.4105  0.483
2021 Yamagata M, Yan W, Sanes JR. A cell atlas of the chick retina based on single cell transcriptomics. Elife. 10. PMID 33393903 DOI: 10.7554/eLife.63907  0.527
2018 Yamagata M, Sanes JR. Expression and Roles of the Immunoglobulin Superfamily Recognition Molecule Sidekick1 in Mouse Retina. Frontiers in Molecular Neuroscience. 11: 485. PMID 30687002 DOI: 10.3389/fnmol.2018.00485  0.614
2018 Duan X, Krishnaswamy A, Laboulaye MA, Liu J, Peng YR, Yamagata M, Toma K, Sanes JR. Cadherin Combinations Recruit Dendrites of Distinct Retinal Neurons to a Shared Interneuronal Scaffold. Neuron. PMID 30197236 DOI: 10.1016/J.Neuron.2018.08.019  0.751
2018 Yamagata M, Duan X, Sanes JR. Cadherins Interact With Synaptic Organizers to Promote Synaptic Differentiation. Frontiers in Molecular Neuroscience. 11: 142. PMID 29760652 DOI: 10.3389/fnmol.2018.00142  0.696
2018 Skocek O, Nöbauer T, Weilguny L, Martínez Traub F, Xia CN, Molodtsov MI, Grama A, Yamagata M, Aharoni D, Cox DD, Golshani P, Vaziri A. High-speed volumetric imaging of neuronal activity in freely moving rodents. Nature Methods. PMID 29736000 DOI: 10.1038/S41592-018-0008-0  0.315
2018 Basu R, Duan X, Taylor MR, Martin EA, Muralidhar S, Wang Y, Gangi-Wellman L, Das SC, Yamagata M, West PJ, Sanes JR, Williams ME. Heterophilic Type II Cadherins Are Required for High-Magnitude Synaptic Potentiation in the Hippocampus. Neuron. 98: 658-668. PMID 29723502 DOI: 10.1016/j.neuron.2018.04.010  0.621
2018 Yamagata M, Sanes JR. Reporter-nanobody fusions (RANbodies) as versatile, small, sensitive immunohistochemical reagents. Proceedings of the National Academy of Sciences of the United States of America. PMID 29440485 DOI: 10.1073/pnas.1722491115  0.483
2018 Parot VJ, Farhi SL, Grama A, Yamagata M, Abdelfattah A, Adam Y, Lou S, Kim JJ, Campbell RE, Cox DD, Cohen AE. Wide Area Profiling of Neuronal Function Using Hadamard Microscopy Brain. DOI: 10.1364/Brain.2018.Bw2C.3  0.302
2017 Basu R, Duan X, Taylor MR, Martin EA, Muralidhar S, Wang Y, Gangi-Wellman L, Das SC, Yamagata M, West PJ, Sanes JR, Williams ME. Heterophilic Type II Cadherins Are Required for High-Magnitude Synaptic Potentiation in the Hippocampus. Neuron. 96: 160-176.e8. PMID 28957665 DOI: 10.1016/J.Neuron.2017.09.009  0.672
2017 Cohen O, Vald L, Yamagata M, Sanes JR, Klar A. Roles of DSCAM in axonal decussation and fasciculation of chick spinal interneurons. The International Journal of Developmental Biology. 61: 235-244. PMID 28621421 DOI: 10.1387/ijdb.160235ak  0.552
2016 Goodman KM, Yamagata M, Jin X, Mannepalli S, Katsamba PS, Ahlsén G, Sergeeva AP, Honig B, Sanes JR, Shapiro L. Molecular basis of sidekick-mediated cell-cell adhesion and specificity. Elife. 5. PMID 27644106 DOI: 10.7554/Elife.19058  0.562
2016 Joesch M, Mankus D, Yamagata M, Shahbazi A, Shalek R, Suissa-Peleg A, Meister M, Lichtman JW, Scheirer WJ, Sanes JR. Reconstruction of genetically identified neurons imaged by serial-section electron microscopy. Elife. 5. PMID 27383271 DOI: 10.7554/Elife.15015  0.533
2016 Martell JD, Yamagata M, Deerinck TJ, Phan S, Kwa CG, Ellisman MH, Sanes JR, Ting AY. A split horseradish peroxidase for the detection of intercellular protein-protein interactions and sensitive visualization of synapses. Nature Biotechnology. PMID 27240195 DOI: 10.1038/Nbt.3563  0.569
2016 Rousso DL, Qiao M, Kagan RD, Yamagata M, Palmiter RD, Sanes JR. Two Pairs of ON and OFF Retinal Ganglion Cells Are Defined by Intersectional Patterns of Transcription Factor Expression. Cell Reports. PMID 27210758 DOI: 10.1016/j.celrep.2016.04.069  0.755
2016 Poliak S, Norovich AL, Yamagata M, Sanes JR, Jessell TM. Muscle-type Identity of Proprioceptors Specified by Spatially Restricted Signals from Limb Mesenchyme. Cell. 164: 512-25. PMID 26824659 DOI: 10.1016/j.cell.2015.12.049  0.488
2016 Goodman KM, Yamagata M, Jin X, Mannepalli S, Katsamba PS, Ahlsén G, Sergeeva AP, Honig B, Sanes JR, Shapiro L. Author response: Molecular basis of sidekick-mediated cell-cell adhesion and specificity Elife. DOI: 10.7554/Elife.19058.021  0.52
2016 Joesch M, Mankus D, Yamagata M, Shahbazi A, Schalek R, Suissa-Peleg A, Meister M, Lichtman JW, Scheirer WJ, Sanes JR. Author response: Reconstruction of genetically identified neurons imaged by serial-section electron microscopy Elife. DOI: 10.7554/Elife.15015.019  0.472
2015 Krishnaswamy A, Yamagata M, Duan X, Hong YK, Sanes JR. Sidekick 2 directs formation of a retinal circuit that detects differential motion. Nature. 524: 466-70. PMID 26287463 DOI: 10.1038/Nature14682  0.786
2015 Krishnaswamy A, Yamagata M, Duan X, Hong YK, Sanes JR. Sidekick 2 directs formation of a retinal circuit that detects differential motion Nature. 524: 466-470. DOI: 10.1038/nature14682  0.733
2012 Yamagata M, Sanes JR. Expanding the Ig superfamily code for laminar specificity in retina: expression and role of contactins. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 32: 14402-14. PMID 23055510 DOI: 10.1523/JNEUROSCI.3193-12.2012  0.625
2012 Yamagata M, Sanes JR. Transgenic strategy for identifying synaptic connections in mice by fluorescence complementation (GRASP). Frontiers in Molecular Neuroscience. 5: 18. PMID 22355283 DOI: 10.3389/fnmol.2012.00018  0.592
2011 Kay JN, De la Huerta I, Kim IJ, Zhang Y, Yamagata M, Chu MW, Meister M, Sanes JR. Retinal ganglion cells with distinct directional preferences differ in molecular identity, structure, and central projections. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 7753-62. PMID 21613488 DOI: 10.1523/Jneurosci.0907-11.2011  0.76
2010 Yamagata M, Sanes JR. Synaptic localization and function of Sidekick recognition molecules require MAGI scaffolding proteins. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 3579-88. PMID 20219992 DOI: 10.1523/JNEUROSCI.6319-09.2010  0.592
2009 Sanes JR, Yamagata M. Many paths to synaptic specificity. Annual Review of Cell and Developmental Biology. 25: 161-95. PMID 19575668 DOI: 10.1146/annurev.cellbio.24.110707.175402  0.588
2009 Hong YK, Yamagata M. Molecular basis of lamina-specific synaptic connections in the retina: Sidekick immunoglobulin superfamily molecules The Sticky Synapse: Cell Adhesion Molecules and Their Role in Synapse Formation and Maintenance. 223-234. DOI: 10.1007/978-0-387-92708-4_10  0.649
2008 Kim IJ, Zhang Y, Yamagata M, Meister M, Sanes JR. Molecular identification of a retinal cell type that responds to upward motion. Nature. 452: 478-82. PMID 18368118 DOI: 10.1038/nature06739  0.619
2008 Yamagata M, Sanes JR. Dscam and Sidekick proteins direct lamina-specific synaptic connections in vertebrate retina. Nature. 451: 465-9. PMID 18216854 DOI: 10.1038/nature06469  0.637
2006 Yamagata M, Weiner JA, Dulac C, Roth KA, Sanes JR. Labeled lines in the retinotectal system: markers for retinorecipient sublaminae and the retinal ganglion cell subsets that innervate them. Molecular and Cellular Neurosciences. 33: 296-310. PMID 16978878 DOI: 10.1016/j.mcn.2006.08.001  0.708
2005 Yamagata M, Sanes JR. Versican in the developing brain: lamina-specific expression in interneuronal subsets and role in presynaptic maturation. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 25: 8457-67. PMID 16162928 DOI: 10.1523/JNEUROSCI.1976-05.2005  0.593
2003 Yamagata M, Sanes JR, Weiner JA. Synaptic adhesion molecules. Current Opinion in Cell Biology. 15: 621-32. PMID 14519398 DOI: 10.1016/S0955-0674(03)00107-8  0.688
2002 Yamagata M, Weiner JA, Sanes JR. Sidekicks: synaptic adhesion molecules that promote lamina-specific connectivity in the retina. Cell. 110: 649-60. PMID 12230981 DOI: 10.1016/S0092-8674(02)00910-8  0.726
1999 Yamagata M, Mai A, Pollerberg GE, Noda M. Regulatory interrelations among topographic molecules CBF1, CBF2 and EphA3 in the developing chick retina. Development, Growth & Differentiation. 41: 575-87. PMID 10545030 DOI: 10.1046/j.1440-169x.1999.00462.x  0.533
1999 Sanes JR, Yamagata M. Formation of lamina-specific synaptic connections. Current Opinion in Neurobiology. 9: 79-87. PMID 10072367 DOI: 10.1016/S0959-4388(99)80010-5  0.584
1999 Takahashi M, Yamagata M, Noda M. Specific expression of ezrin, a cytoskeletal-membrane linker protein, in a subset of chick retinotectal and sensory projections. The European Journal of Neuroscience. 11: 545-58. PMID 10051754 DOI: 10.1046/j.1460-9568.1999.00460.x  0.633
1998 Yamagata M, Noda M. The winged-helix transcription factor CWH-3 is expressed in developing neural crest cells. Neuroscience Letters. 249: 33-6. PMID 9672382 DOI: 10.1016/S0304-3940(98)00385-1  0.533
1998 Yamagata M, Mai A, Pollerberg G, Noda M. Developmental expression of topographic molecules specifying the retinotectal projection map Neuroscience Research. 31: S300. DOI: 10.1016/S0168-0102(98)82260-8  0.533
1998 Yamagata M, Noda M. Lamina-specific and synaptogenic expression of the TB2 antigen during development of the chick visual system Neuroscience Research. 31: S300. DOI: 10.1016/S0168-0102(98)82259-1  0.533
1996 Yuasa J, Hirano S, Yamagata M, Noda M. Visual projection map specified by topographic expression of transcription factors in the retina. Nature. 382: 632-5. PMID 8757134 DOI: 10.1038/382632a0  0.533
1996 Leber SM, Yamagata M, Sanes JR. Gene transfer using replication-defective retroviral and adenoviral vectors. Methods in Cell Biology. 51: 161-83. PMID 8722476 DOI: 10.1016/S0091-679X(08)60628-7  0.455
1995 Yamagata M, Sanes JR. Target-independent diversification and target-specific projection of chemically defined retinal ganglion cell subsets. Development (Cambridge, England). 121: 3763-76. PMID 8582286  0.548
1995 Yamagata M, Sanes JR. Lamina-specific cues guide outgrowth and arborization of retinal axons in the optic tectum. Development (Cambridge, England). 121: 189-200. PMID 7867499  0.487
1995 Yamagata M, Herman JP, Sanes JR. Lamina-specific expression of adhesion molecules in developing chick optic tectum. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 15: 4556-71. PMID 7790923 DOI: 10.1523/Jneurosci.15-06-04556.1995  0.603
1994 Yamagata M, Merlie JP, Sanes JR. Interspecific comparisons reveal conserved features of the Drosophila Toll protein. Gene. 139: 223-8. PMID 8112609 DOI: 10.1016/0378-1119(94)90760-9  0.482
1994 Yamagata M, Jaye DL, Sanes JR. Gene transfer to avian embryos with a recombinant adenovirus. Developmental Biology. 166: 355-9. PMID 7958459 DOI: 10.1006/dbio.1994.1321  0.491
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