Nicolas Salamin, Ph.D. - Publications

Affiliations: 
Université de Lausanne, Lausanne, VD, Switzerland 

132 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Olivares I, Tusso S, José Sanín M, de La Harpe M, Loiseau O, Rolland J, Salamin N, Kessler M, Shimizu KK, Paris M. Hyper-Cryptic radiation of a tropical montane plant lineage. Molecular Phylogenetics and Evolution. 190: 107954. PMID 37898295 DOI: 10.1016/j.ympev.2023.107954  0.745
2023 Rolland J, Henao-Diaz LF, Doebeli M, Germain R, Harmon LJ, Knowles LL, Liow LH, Mank JE, Machac A, Otto SP, Pennell M, Salamin N, Silvestro D, Sugawara M, Uyeda J, et al. Conceptual and empirical bridges between micro- and macroevolution. Nature Ecology & Evolution. PMID 37429904 DOI: 10.1038/s41559-023-02116-7  0.72
2021 Zhang Q, Ree RH, Salamin N, Xing Y, Silvestro D. Fossil-informed models reveal a Boreotropical origin and divergent evolutionary trajectories in the walnut family (Juglandaceae). Systematic Biology. PMID 33964165 DOI: 10.1093/sysbio/syab030  0.358
2021 Ogutcen E, Christe C, Nishii K, Salamin N, Möller M, Perret M. Phylogenomics of Gesneriaceae using targeted capture of nuclear genes. Molecular Phylogenetics and Evolution. 107068. PMID 33422648 DOI: 10.1016/j.ympev.2021.107068  0.32
2020 Saladin B, Pellissier L, Graham CH, Nobis MP, Salamin N, Zimmermann NE. Rapid climate change results in long-lasting spatial homogenization of phylogenetic diversity. Nature Communications. 11: 4663. PMID 32938914 DOI: 10.1038/S41467-020-18343-6  0.34
2020 Ren G, Mateo RG, Conti E, Salamin N. Population Genetic Structure and Demographic History of in Southwest China. Frontiers in Plant Science. 11: 986. PMID 32714358 DOI: 10.3389/Fpls.2020.00986  0.397
2020 Duchen P, Alfaro ML, Rolland J, Salamin N, Silvestro D. On the effect of asymmetrical trait inheritance on models of trait evolution. Systematic Biology. PMID 32681798 DOI: 10.1093/Sysbio/Syaa055  0.739
2020 De La Harpe M, Paris M, Hess J, Barfuss MHJ, Serrano-Serrano ML, Ghatak A, Chaturvedi P, Weckwerth W, Till W, Salamin N, Wai CM, Ming R, Lexer C. Genomic footprints of repeated evolution of CAM photosynthesis in a Neotropical species radiation. Plant, Cell & Environment. PMID 32677061 DOI: 10.1111/Pce.13847  0.425
2020 Yan Z, Martin SH, Gotzek D, Arsenault SV, Duchen P, Helleu Q, Riba-Grognuz O, Hunt BG, Salamin N, Shoemaker D, Ross KG, Keller L. Evolution of a supergene that regulates a trans-species social polymorphism. Nature Ecology & Evolution. PMID 31959939 DOI: 10.1038/S41559-019-1081-1  0.369
2020 Gaboriau T, Mendes FK, Joly S, Silvestro D, Salamin N. A multi‐platform package for the analysis of intra‐ and interspecific trait evolution Methods in Ecology and Evolution. DOI: 10.1111/2041-210X.13458  0.319
2019 Duchen P, Hautphenne S, Lehmann L, Salamin N. Linking micro and macroevolution in the presence of migration. Journal of Theoretical Biology. 110087. PMID 31758967 DOI: 10.1016/J.Jtbi.2019.110087  0.425
2019 Loiseau O, Weigand A, Noben S, Rolland J, Silvestro D, Kessler M, Lehnert M, Salamin N. Slowly but surely: gradual diversification and phenotypic evolution in the hyper-diverse tree fern family Cyatheaceae. Annals of Botany. PMID 31562744 DOI: 10.1093/Aob/Mcz145  0.757
2019 Yamada K, Davydov II, Besnard G, Salamin N. Duplication history and molecular evolution of the rbcS multigene family in angiosperms. Journal of Experimental Botany. PMID 31498865 DOI: 10.1093/Jxb/Erz363  0.381
2019 Loiseau O, Olivares I, Paris M, de La Harpe M, Weigand A, Koubínová D, Rolland J, Bacon CD, Balslev H, Borchsenius F, Cano A, Couvreur TLP, Delnatte C, Fardin F, Gayot M, ... ... Salamin N, et al. Targeted Capture of Hundreds of Nuclear Genes Unravels Phylogenetic Relationships of the Diverse Neotropical Palm Tribe Geonomateae. Frontiers in Plant Science. 10: 864. PMID 31396244 DOI: 10.3389/Fpls.2019.00864  0.77
2019 Davydov II, Salamin N, Robinson-Rechavi M. Large-Scale Comparative Analysis of Codon Models Accounting for Protein and Nucleotide Selection. Molecular Biology and Evolution. PMID 30847475 DOI: 10.1093/Molbev/Msz048  0.325
2019 Marcionetti A, Rossier V, Roux N, Salis P, Laudet V, Salamin N. Insights into the genomics of clownfish adaptive radiation: genetic basis of the mutualism with sea anemones. Genome Biology and Evolution. PMID 30830203 DOI: 10.1093/Gbe/Evz042  0.395
2019 Meyer X, Dib L, Silvestro D, Salamin N. Simultaneous Bayesian inference of phylogeny and molecular coevolution. Proceedings of the National Academy of Sciences of the United States of America. PMID 30808804 DOI: 10.1073/Pnas.1813836116  0.404
2019 Saladin B, Thuiller W, Graham CH, Lavergne S, Maiorano L, Salamin N, Zimmermann NE. Environment and evolutionary history shape phylogenetic turnover in European tetrapods. Nature Communications. 10: 249. PMID 30651566 DOI: 10.1038/S41467-018-08232-4  0.435
2019 Cozzarolo C, Balke M, Buerki S, Arrigo N, Pitteloud C, Gueuning M, Salamin N, Sartori M, Alvarez N. Biogeography and Ecological Diversification of a Mayfly Clade in New Guinea Frontiers in Ecology and Evolution. 7. DOI: 10.3389/Fevo.2019.00233  0.705
2019 Marcionetti A, Rossier V, Roux N, Salis P, Laudet V, Salamin N. Genomics of clownfish adaptation to sea anemones: investigating the genetic bases of the acquisition of the mutualism and the diversification along host usage and habitat gradients Frontiers in Marine Science. 6. DOI: 10.3389/Conf.Fmars.2019.07.00042  0.334
2019 Donati GFA, Parravicini V, Leprieur F, Hagen O, Gaboriau T, Heine C, Kulbicki M, Rolland J, Salamin N, Albouy C, Pellissier L. A process‐based model supports an association between dispersal and the prevalence of species traits in tropical reef fish assemblages Ecography. 42: 2095-2106. DOI: 10.1111/Ecog.04537  0.744
2019 Machado TM, Loiseau O, Paris M, Weigand A, Versieux LM, Stehmann JR, Lexer C, Salamin N. Systematics of Vriesea (Bromeliaceae): phylogenetic relationships based on nuclear gene and partial plastome sequences Botanical Journal of the Linnean Society. 192: 656-674. DOI: 10.1093/Botlinnean/Boz102  0.435
2019 Silvestro D, Salamin N, Antonelli A, Meyer X. Improved estimation of macroevolutionary rates from fossil data using a Bayesian framework Paleobiology. 45: 546-570. DOI: 10.1017/Pab.2019.23  0.396
2018 Meyer X, Dib L, Salamin N. CoevDB: a database of intramolecular coevolution among protein-coding genes of the bony vertebrates. Nucleic Acids Research. PMID 30357342 DOI: 10.1093/Nar/Gky986  0.322
2018 de La Harpe M, Hess J, Loiseau O, Salamin N, Lexer C, Paris M. A dedicated target capture approach reveals variable genetic markers across micro- and macro-evolutionary time scales in palms. Molecular Ecology Resources. PMID 30240120 DOI: 10.1111/1755-0998.12945  0.439
2018 Dufresnes C, Miquel C, Remollino N, Biollaz F, Salamin N, Taberlet P, Fumagalli L. Howling from the past: historical phylogeography and diversity losses in European grey wolves. Proceedings. Biological Sciences. 285. PMID 30068681 DOI: 10.1098/Rspb.2018.1148  0.348
2018 Silvestro D, Tejedor MF, Serrano-Serrano ML, Loiseau O, Rossier V, Rolland J, Zizka A, Höhna S, Antonelli A, Salamin N. Early arrival and climatically-linked geographic expansion of New World monkeys from tiny African ancestors. Systematic Biology. PMID 29931325 DOI: 10.1093/Sysbio/Syy046  0.758
2018 Dib L, Salamin N, Gfeller D. Polymorphic sites preferentially avoid co-evolving residues in MHC class I proteins. Plos Computational Biology. 14: e1006188. PMID 29782520 DOI: 10.1371/Journal.Pcbi.1006188  0.335
2018 Rolland J, Silvestro D, Litsios G, Faye L, Salamin N. Clownfishes evolution below and above the species level. Proceedings. Biological Sciences. 285. PMID 29467260 DOI: 10.1098/Rspb.2017.1796  0.743
2018 Marcionetti A, Rossier V, Bertrand JAM, Litsios G, Salamin N. First draft genome of an iconic clownfish species (Amphiprion frenatus). Molecular Ecology Resources. PMID 29455459 DOI: 10.1111/1755-0998.12772  0.382
2018 Rolland J, Silvestro D, Schluter D, Guisan A, Broenniman O, Salamin N. Publisher Correction: The impact of endothermy on the climatic niche evolution and the distribution of vertebrate diversity. Nature Ecology & Evolution. PMID 29440716 DOI: 10.1038/S41559-018-0492-8  0.664
2018 Rolland J, Silvestro D, Schluter D, Guisan A, Broennimann O, Salamin N. The impact of endothermy on the climatic niche evolution and the distribution of vertebrate diversity. Nature Ecology & Evolution. PMID 29379185 DOI: 10.1038/S41559-017-0451-9  0.758
2018 Ren G, Mateo RG, Guisan A, Conti E, Salamin N. Species divergence and maintenance of species cohesion of three closely related Primula species in the Qinghai–Tibet Plateau Journal of Biogeography. 45: 2495-2507. DOI: 10.1111/Jbi.13415  0.472
2017 Dib L, San-Jose LM, Ducrest AL, Salamin N, Roulin A. Selection on the Major Color Gene Melanocortin-1-Receptor Shaped the Evolution of the Melanocortin System Genes. International Journal of Molecular Sciences. 18. PMID 29206201 DOI: 10.3390/Ijms18122618  0.302
2017 Serrano-Serrano ML, Marcionetti A, Perret M, Salamin N. Transcriptomic resources for an endemic Neotropical plant lineage (Gesneriaceae). Applications in Plant Sciences. 5. PMID 28439475 DOI: 10.3732/Apps.1600135  0.435
2017 Laurent S, Salamin N, Robinson-Rechavi M. No evidence for the radiation time lag model after whole genome duplications in Teleostei. Plos One. 12: e0176384. PMID 28426792 DOI: 10.1371/Journal.Pone.0176384  0.416
2017 Serrano-Serrano ML, Rolland J, Clark JL, Salamin N, Perret M. Hummingbird pollination and the diversification of angiosperms: an old and successful association in Gesneriaceae. Proceedings. Biological Sciences. 284. PMID 28381621 DOI: 10.1098/Rspb.2016.2816  0.731
2017 Saladin B, Leslie AB, Wüest RO, Litsios G, Conti E, Salamin N, Zimmermann NE. Fossils matter: improved estimates of divergence times in Pinus reveal older diversification. Bmc Evolutionary Biology. 17: 95. PMID 28376717 DOI: 10.1186/S12862-017-0941-Z  0.408
2017 de la Harpe M, Paris M, Karger DN, Rolland J, Kessler M, Salamin N, Lexer C. Molecular ecology studies of species radiations: current research gaps, opportunities, and challenges. Molecular Ecology. PMID 28316112 DOI: 10.1111/Mec.14110  0.747
2017 Pellissier L, Kostikova A, Litsios G, Salamin N, Alvarez N. High rate of protein coding sequence evolution and species diversification in the lycaenids Frontiers in Ecology and Evolution. 5. DOI: 10.3389/Fevo.2017.00090  0.444
2017 Cola VD, Broennimann O, Petitpierre B, Breiner FT, D'Amen M, Randin C, Engler R, Pottier J, Pio D, Dubuis A, Pellissier L, Mateo RG, Hordijk W, Salamin N, Guisan A. ecospat: an R package to support spatial analyses and modeling of species niches and distributions Ecography. 40: 774-787. DOI: 10.1111/Ecog.02671  0.39
2017 D'Amen M, Mateo RG, Pottier J, Thuiller W, Maiorano L, Pellissier L, Ndiribe C, Salamin N, Guisan A. Improving spatial predictions of taxonomic, functional and phylogenetic diversity Journal of Ecology. 106: 76-86. DOI: 10.1111/1365-2745.12801  0.395
2016 Meyer X, Chopard B, Salamin N. Accelerating Bayesian inference for evolutionary biology models. Bioinformatics (Oxford, England). PMID 28025203 DOI: 10.1093/Bioinformatics/Btw712  0.306
2016 Ren G, Mateo RG, Liu J, Suchan T, Alvarez N, Guisan A, Conti E, Salamin N. Genetic consequences of Quaternary climatic oscillations in the Himalayas: Primula tibetica as a case study based on restriction site-associated DNA sequencing. The New Phytologist. PMID 27696413 DOI: 10.1111/Nph.14221  0.413
2016 Rolland J, Loiseau O, Romiguier J, Salamin N. Molecular evolutionary rates are not correlated with temperature and latitude in Squamata: an exception to the metabolic theory of ecology? Bmc Evolutionary Biology. 16: 95. PMID 27198179 DOI: 10.1186/S12862-016-0666-4  0.694
2016 Cattin L, Schuerch J, Salamin N, Dubey S. Why are some species older than others? A large-scale study of vertebrates. Bmc Evolutionary Biology. 16: 90. PMID 27142042 DOI: 10.1186/S12862-016-0646-8  0.449
2016 Silvestro D, Zizka A, Bacon CD, Cascales-Miñana B, Salamin N, Antonelli A. Fossil biogeography: a new model to infer dispersal, extinction and sampling from palaeontological data. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 371. PMID 26977065 DOI: 10.1098/Rstb.2015.0225  0.44
2016 Chase MW, Salamin N, Wilkinson M, Dunwell JM, Kesanakurthi RP, Haider N, Savolainen V. Correction to 'Land plants and DNA barcodes: short-term and long-term goals'. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 371. PMID 26977057 DOI: 10.1098/Rstb.2015.0063  0.533
2016 Kostikova A, Silvestro D, Pearman PB, Salamin N. Bridging inter- and intraspecific trait evolution with a hierarchical Bayesian approach. Systematic Biology. PMID 26911152 DOI: 10.1093/Sysbio/Syw010  0.431
2016 Rolland J, Salamin N. Niche width impacts vertebrate diversification Global Ecology and Biogeography. 25: 1252-1263. DOI: 10.1111/Geb.12482  0.756
2016 Pellissier L, Moreira X, Danner H, Serrano M, Salamin N, van Dam NM, Rasmann S. The simultaneous inducibility of phytochemicals related to plant direct and indirect defences against herbivores is stronger at low elevation Journal of Ecology. 104: 1116-1125. DOI: 10.1111/1365-2745.12580  0.406
2016 Wüest RO, Litsios G, Forest F, Lexer C, Linder HP, Salamin N, Zimmermann NE, Pearman PB. Resprouter fraction in Cape Restionaceae assemblages varies with climate and soil type Functional Ecology. DOI: 10.1111/1365-2435.12629  0.394
2015 Serrano-Serrano ML, Perret M, Guignard M, Chautems A, Silvestro D, Salamin N. Decoupled evolution of floral traits and climatic preferences in a clade of Neotropical Gesneriaceae. Bmc Evolutionary Biology. 15: 247. PMID 26555183 DOI: 10.1186/S12862-015-0527-6  0.484
2015 Pellissier L, Litsios G, Fishbein M, Salamin N, Agrawal AA, Rasmann S. Different rates of defense evolution and niche preferences in clonal and nonclonal milkweeds (Asclepias spp.). The New Phytologist. PMID 26379106 DOI: 10.1111/Nph.13649  0.441
2015 Ren G, Conti E, Salamin N. Phylogeny and biogeography of Primula sect. Armerina: implications for plant evolution under climate change and the uplift of the Qinghai-Tibet Plateau. Bmc Evolutionary Biology. 15: 161. PMID 26275399 DOI: 10.1186/S12862-015-0445-7  0.459
2015 Laurent S, Robinson-Rechavi M, Salamin N. Detecting patterns of species diversification in the presence of both rate shifts and mass extinctions. Bmc Evolutionary Biology. 15: 157. PMID 26260305 DOI: 10.1186/S12862-015-0432-Z  0.421
2015 Silvestro D, Antonelli A, Salamin N, Quental TB. The role of clade competition in the diversification of North American canids. Proceedings of the National Academy of Sciences of the United States of America. 112: 8684-9. PMID 26124128 DOI: 10.1073/Pnas.1502803112  0.44
2015 Pirie MD, Litsios G, Bellstedt DU, Salamin N, Kissling J. Back to Gondwanaland: can ancient vicariance explain (some) Indian Ocean disjunct plant distributions? Biology Letters. 11. PMID 26063747 DOI: 10.1098/Rsbl.2015.0086  0.374
2015 Pillonel T, Bertelli C, Salamin N, Greub G. Taxogenomics of the order Chlamydiales. International Journal of Systematic and Evolutionary Microbiology. 65: 1381-93. PMID 25634949 DOI: 10.1099/Ijs.0.000090  0.42
2014 Litsios G, Salamin N. Hybridisation and diversification in the adaptive radiation of clownfishes. Bmc Evolutionary Biology. 14: 245. PMID 25433367 DOI: 10.1186/S12862-014-0245-5  0.401
2014 Litsios G, Kostikova A, Salamin N. Host specialist clownfishes are environmental niche generalists. Proceedings. Biological Sciences / the Royal Society. 281. PMID 25274370 DOI: 10.1098/Rspb.2013.3220  0.416
2014 Lexer C, Wüest RO, Mangili S, Heuertz M, Stölting KN, Pearman PB, Forest F, Salamin N, Zimmermann NE, Bossolini E. Genomics of the divergence continuum in an African plant biodiversity hotspot, I: drivers of population divergence in Restio capensis (Restionaceae). Molecular Ecology. 23: 4373-86. PMID 25065899 DOI: 10.1111/Mec.12870  0.458
2014 Pellissier L, Niculita-Hirzel H, Dubuis A, Pagni M, Guex N, Ndiribe C, Salamin N, Xenarios I, Goudet J, Sanders IR, Guisan A. Soil fungal communities of grasslands are environmentally structured at a regional scale in the Alps. Molecular Ecology. 23: 4274-90. PMID 25041483 DOI: 10.1111/Mec.12854  0.382
2014 Zaheri M, Dib L, Salamin N. A generalized mechanistic codon model. Molecular Biology and Evolution. 31: 2528-41. PMID 24958740 DOI: 10.1093/Molbev/Msu196  0.304
2014 Kostikova A, Salamin N, Pearman PB. The role of climatic tolerances and seed traits in reduced extinction rates of temperate polygonaceae. Evolution; International Journal of Organic Evolution. 68: 1856-70. PMID 24628685 DOI: 10.1111/Evo.12400  0.466
2014 Silvestro D, Schnitzler J, Liow LH, Antonelli A, Salamin N. Bayesian estimation of speciation and extinction from incomplete fossil occurrence data. Systematic Biology. 63: 349-67. PMID 24510972 DOI: 10.1093/Sysbio/Syu006  0.435
2014 Dib L, Silvestro D, Salamin N. Evolutionary footprint of coevolving positions in genes. Bioinformatics (Oxford, England). 30: 1241-9. PMID 24413673 DOI: 10.1093/Bioinformatics/Btu012  0.373
2014 Christin PA, Spriggs E, Osborne CP, Strömberg CA, Salamin N, Edwards EJ. Molecular dating, evolutionary rates, and the age of the grasses. Systematic Biology. 63: 153-65. PMID 24287097 DOI: 10.1093/Sysbio/Syt072  0.655
2014 Moretti S, Laurenczy B, Gharib WH, Castella B, Kuzniar A, Schabauer H, Studer RA, Valle M, Salamin N, Stockinger H, Robinson-Rechavi M. Selectome update: quality control and computational improvements to a database of positive selection. Nucleic Acids Research. 42: D917-21. PMID 24225318 DOI: 10.1093/Nar/Gkt1065  0.321
2014 Litsios G, Wüest RO, Kostikova A, Forest F, Lexer C, Linder HP, Pearman PB, Zimmermann NE, Salamin N. Effects of a fire response trait on diversification in replicated radiations. Evolution; International Journal of Organic Evolution. 68: 453-65. PMID 24102114 DOI: 10.1111/Evo.12273  0.459
2014 Litsios G, Pearman PB, Lanterbecq D, Tolou N, Salamin N. The radiation of the clownfishes has two geographical replicates Journal of Biogeography. 41: 2140-2149. DOI: 10.1111/Jbi.12370  0.419
2014 Kostikova A, Litsios G, Burgy S, Milani L, Pearman PB, Salamin N. Scale-dependent adaptive evolution and morphological convergence to climatic niche in Californian eriogonoids (Polygonaceae) Journal of Biogeography. 41: 1326-1337. DOI: 10.1111/Jbi.12294  0.44
2014 Pio DV, Engler R, Linder HP, Monadjem A, Cotterill FPD, Taylor PJ, Schoeman MC, Price BW, Villet MH, Eick G, Salamin N, Guisan A. Climate change effects on animal and plant phylogenetic diversity in southern Africa Global Change Biology. 20: 1538-1549. DOI: 10.1111/Gcb.12524  0.426
2014 Silvestro D, Salamin N, Schnitzler J. PyRate: A new program to estimate speciation and extinction rates from incomplete fossil data Methods in Ecology and Evolution. 5: 1126-1131. DOI: 10.1111/2041-210X.12263  0.384
2014 Ndiribe C, Pellissier L, Dubuis A, Vittoz P, Salamin N, Guisan A. Plant functional and phylogenetic turnover correlate with climate and land use in the Western Swiss Alps Journal of Plant Ecology. 7: 439-450. DOI: 10.1093/Jpe/Rtt064  0.384
2013 Ndiribe C, Pellissier L, Antonelli S, Dubuis A, Pottier J, Vittoz P, Guisan A, Salamin N. Phylogenetic plant community structure along elevation is lineage specific. Ecology and Evolution. 3: 4925-39. PMID 24455126 DOI: 10.1002/Ece3.868  0.389
2013 Pellissier L, Rohr RP, Ndiribe C, Pradervand JN, Salamin N, Guisan A, Wisz M. Combining food web and species distribution models for improved community projections. Ecology and Evolution. 3: 4572-83. PMID 24340196 DOI: 10.1002/Ece3.843  0.389
2013 Kostikova A, Litsios G, Salamin N, Pearman PB. Linking life-history traits, ecology, and niche breadth evolution in North American eriogonoids (Polygonaceae). The American Naturalist. 182: 760-74. PMID 24231537 DOI: 10.1086/673527  0.48
2013 Papadopulos AS, Powell MP, Pupulin F, Warner J, Hawkins JA, Salamin N, Chittka L, Williams NH, Whitten WM, Loader D, Valente LM, Chase MW, Savolainen V. Convergent evolution of floral signals underlies the success of Neotropical orchids. Proceedings. Biological Sciences / the Royal Society. 280: 20130960. PMID 23804617 DOI: 10.1098/Rspb.2013.0960  0.632
2013 Mazer SJ, Travers SE, Cook BI, Davies TJ, Bolmgren K, Kraft NJ, Salamin N, Inouye DW. Flowering date of taxonomic families predicts phenological sensitivity to temperature: Implications for forecasting the effects of climate change on unstudied taxa. American Journal of Botany. 100: 1381-97. PMID 23752756 DOI: 10.3732/Ajb.1200455  0.373
2013 Pellissier L, Ndiribe C, Dubuis A, Pradervand JN, Salamin N, Guisan A, Rasmann S. Turnover of plant lineages shapes herbivore phylogenetic beta diversity along ecological gradients. Ecology Letters. 16: 600-8. PMID 23448096 DOI: 10.1111/Ele.12083  0.395
2013 Lexer C, Mangili S, Bossolini E, Forest F, Stölting KN, Pearman PB, Zimmermann NE, Salamin N. 'Next generation' biogeography: Towards understanding the drivers of species diversification and persistence Journal of Biogeography. 40: 1013-1022. DOI: 10.1111/Jbi.12076  0.489
2013 Lexer C, Mangili S, Bossolini E, Forest F, Stölting KN, Pearman PB, Zimmermann NE, Salamin N. 'Next generation' biogeography: Towards understanding the drivers of species diversification and persistence Journal of Biogeography. 40: 1013-1022. DOI: 10.1111/jbi.12076  0.307
2013 Perret M, Chautems A, De Araujo AO, Salamin N. Temporal and spatial origin of Gesneriaceae in the New World inferred from plastid DNA sequences Botanical Journal of the Linnean Society. 171: 61-79. DOI: 10.1111/J.1095-8339.2012.01303.X  0.477
2013 Davies TJ, Wolkovich EM, Kraft NJB, Salamin N, Allen JM, Ault TR, Betancourt JL, Bolmgren K, Cleland EE, Cook BI, Crimmins TM, Mazer SJ, Mccabe GJ, Pau S, Regetz J, et al. Phylogenetic conservatism in plant phenology Journal of Ecology. 101: 1520-1530. DOI: 10.1111/1365-2745.12154  0.452
2012 Litsios G, Sims CA, Wüest RO, Pearman PB, Zimmermann NE, Salamin N. Mutualism with sea anemones triggered the adaptive radiation of clownfishes. Bmc Evolutionary Biology. 12: 212. PMID 23122007 DOI: 10.1186/1471-2148-12-212  0.446
2012 Moretti S, Murri R, Maffioletti S, Kuzniar A, Castella B, Salamin N, Robinson-Rechavi M, Stockinger H. gcodeml: a Grid-enabled tool for detecting positive selection in biological evolution. Studies in Health Technology and Informatics. 175: 59-68. PMID 22941988 DOI: 10.3233/978-1-61499-054-3-59  0.323
2012 Litsios G, Pellissier L, Forest F, Lexer C, Pearman PB, Zimmermann NE, Salamin N. Trophic specialization influences the rate of environmental niche evolution in damselfishes (Pomacentridae). Proceedings. Biological Sciences / the Royal Society. 279: 3662-9. PMID 22719034 DOI: 10.1098/Rspb.2012.1140  0.46
2012 Davies TJ, Kraft NJ, Salamin N, Wolkovich EM. Incompletely resolved phylogenetic trees inflate estimates of phylogenetic conservatism. Ecology. 93: 242-7. PMID 22624305 DOI: 10.1890/11-1360.1  0.48
2012 Wolkovich EM, Cook BI, Allen JM, Crimmins TM, Betancourt JL, Travers SE, Pau S, Regetz J, Davies TJ, Kraft NJ, Ault TR, Bolmgren K, Mazer SJ, McCabe GJ, McGill BJ, ... ... Salamin N, et al. Warming experiments underpredict plant phenological responses to climate change. Nature. 485: 494-7. PMID 22622576 DOI: 10.1038/Nature11014  0.35
2012 Naciri Y, Caetano S, Salamin N. Plant DNA barcodes and the influence of gene flow. Molecular Ecology Resources. 12: 575-80. PMID 22394382 DOI: 10.1111/J.1755-0998.2012.03130.X  0.401
2012 Witsenburg F, Salamin N, Christe P. The evolutionary host switches of Polychromophilus: a multi-gene phylogeny of the bat malaria genus suggests a second invasion of mammals by a haemosporidian parasite. Malaria Journal. 11: 53. PMID 22356874 DOI: 10.1186/1475-2875-11-53  0.324
2012 Christin PA, Besnard G, Edwards EJ, Salamin N. Effect of genetic convergence on phylogenetic inference. Molecular Phylogenetics and Evolution. 62: 921-7. PMID 22197805 DOI: 10.1016/J.Ympev.2011.12.002  0.641
2012 Aliscioni S, Bell HL, Besnard G, Christin PA, Columbus JT, Duvall MR, Edwards EJ, Giussani L, Hasenstab-Lehman K, Hilu KW, Hodkinson TR, Ingram AL, Kellogg EA, Mashayekhi S, Morrone O, ... ... Salamin N, et al. New grass phylogeny resolves deep evolutionary relationships and discovers C 4 origins New Phytologist. 193: 304-312. PMID 22115274 DOI: 10.1111/j.1469-8137.2011.03972.x  0.609
2012 Pellissier L, Litsios G, Fiedler K, Pottier J, Dubuis A, Pradervand JN, Salamin N, Guisan A. Loss of interactions with ants under cold climate in a regional myrmecophilous butterfly fauna Journal of Biogeography. 39: 1782-1790. DOI: 10.1111/J.1365-2699.2012.02743.X  0.446
2012 Cook BI, Wolkovich EM, Davies TJ, Ault TR, Betancourt JL, Allen JM, Bolmgren K, Cleland EE, Crimmins TM, Kraft NJB, Lancaster LT, Mazer SJ, McCabe GJ, McGill BJ, Parmesan C, ... ... Salamin N, et al. Sensitivity of Spring Phenology to Warming Across Temporal and Spatial Climate Gradients in Two Independent Databases Ecosystems. 15: 1283-1294. DOI: 10.1007/S10021-012-9584-5  0.312
2012 Cook BI, Wolkovich EM, Davies TJ, Ault TR, Betancourt JL, Allen JM, Bolmgren K, Cleland EE, Crimmins TM, Kraft NJB, Lancaster LT, Mazer SJ, McCabe GJ, McGill BJ, Parmesan C, ... ... Salamin N, et al. Sensitivity of Spring Phenology to Warming Across Temporal and Spatial Climate Gradients in Two Independent Databases Ecosystems. 15: 1283-1294. DOI: 10.1007/S10021-012-9584-5  0.312
2011 Pio DV, Broennimann O, Barraclough TG, Reeves G, Rebelo AG, Thuiller W, Guisan A, Salamin N. Spatial predictions of phylogenetic diversity in conservation decision making. Conservation Biology : the Journal of the Society For Conservation Biology. 25: 1229-39. PMID 22070274 DOI: 10.1111/J.1523-1739.2011.01773.X  0.376
2011 Buerki S, Forest F, Salamin N, Alvarez N. Comparative performance of supertree algorithms in large data sets using the soapberry family (Sapindaceae) as a case study. Systematic Biology. 60: 32-44. PMID 21068445 DOI: 10.1093/Sysbio/Syq057  0.311
2010 Salamin N, Wüest RO, Lavergne S, Thuiller W, Pearman PB. Assessing rapid evolution in a changing environment. Trends in Ecology & Evolution. 25: 692-8. PMID 20961648 DOI: 10.1016/J.Tree.2010.09.009  0.381
2010 Burri R, Salamin N, Studer RA, Roulin A, Fumagalli L. Adaptive divergence of ancient gene duplicates in the avian MHC class II beta. Molecular Biology and Evolution. 27: 2360-74. PMID 20463048 DOI: 10.1093/Molbev/Msq120  0.352
2010 Edwards EJ, Osborne CP, Strömberg CA, Smith SA, Bond WJ, Christin PA, Cousins AB, Duvall MR, Fox DL, Freckleton RP, Ghannoum O, Hartwell J, Huang Y, Janis CM, ... ... Salamin N, et al. The origins of C4 grasslands: integrating evolutionary and ecosystem science. Science (New York, N.Y.). 328: 587-91. PMID 20431008 DOI: 10.1126/Science.1177216  0.657
2010 Roulin A, Salamin N. Insularity and the evolution of melanism, sexual dichromatism and body size in the worldwide-distributed barn owl. Journal of Evolutionary Biology. 23: 925-34. PMID 20298444 DOI: 10.1111/J.1420-9101.2010.01961.X  0.328
2010 Hodkinson TR, Ní Chonghaile G, Sungkaew S, Chase MW, Salamin N, Stapleton CMA. Phylogenetic analyses of plastid and nuclear DNA sequences indicate a rapid late Miocene radiation of the temperate bamboo tribe Arundinarieae (Poaceae, Bambusoideae) Plant Ecology and Diversity. 3: 109-120. DOI: 10.1080/17550874.2010.521524  0.657
2009 Christin PA, Samaritani E, Petitpierre B, Salamin N, Besnard G. Evolutionary insights on C4 photosynthetic subtypes in grasses from genomics and phylogenetics. Genome Biology and Evolution. 1: 221-30. PMID 20333192 DOI: 10.1093/Gbe/Evp020  0.66
2009 Besnard G, Muasya AM, Russier F, Roalson EH, Salamin N, Christin PA. Phylogenomics of C(4) photosynthesis in sedges (Cyperaceae): multiple appearances and genetic convergence. Molecular Biology and Evolution. 26: 1909-19. PMID 19461115 DOI: 10.1093/Molbev/Msp103  0.668
2009 Christin PA, Salamin N, Kellogg EA, Vicentini A, Besnard G. Integrating phylogeny into studies of C4 variation in the grasses. Plant Physiology. 149: 82-7. PMID 19126698 DOI: 10.1104/Pp.108.128553  0.6
2009 Roulin A, Wink M, Salamin N. Selection on a eumelanic ornament is stronger in the tropics than in temperate zones in the worldwide-distributed barn owl. Journal of Evolutionary Biology. 22: 345-54. PMID 19032496 DOI: 10.1111/J.1420-9101.2008.01651.X  0.377
2009 Sungkaew S, Stapleton CM, Salamin N, Hodkinson TR. Non-monophyly of the woody bamboos (Bambuseae; Poaceae): a multi-gene region phylogenetic analysis of Bambusoideae s.s. Journal of Plant Research. 122: 95-108. PMID 19018609 DOI: 10.1007/S10265-008-0192-6  0.738
2009 Christin PA, Petitpierre B, Salamin N, Büchi L, Besnard G. Evolution of C(4) phosphoenolpyruvate carboxykinase in grasses, from genotype to phenotype. Molecular Biology and Evolution. 26: 357-65. PMID 18988688 DOI: 10.1093/Molbev/Msn255  0.652
2009 Bouchenak-Khelladi Y, Verboom GA, Hodkinson TR, Salamin N, Francois O, Ní Chonghaile G, Savolainen V. The origins and diversification of C4 grasses and savanna-adapted ungulates Global Change Biology. 15: 2397-2417. DOI: 10.1111/J.1365-2486.2009.01860.X  0.728
2008 Christin PA, Salamin N, Muasya AM, Roalson EH, Russier F, Besnard G. Evolutionary switch and genetic convergence on rbcL following the evolution of C4 photosynthesis. Molecular Biology and Evolution. 25: 2361-8. PMID 18695049 DOI: 10.1093/Molbev/Msn178  0.637
2008 Dubey S, Salamin N, Ruedi M, Barrière P, Colyn M, Vogel P. Biogeographic origin and radiation of the Old World crocidurine shrews (Mammalia: Soricidae) inferred from mitochondrial and nuclear genes. Molecular Phylogenetics and Evolution. 48: 953-63. PMID 18657625 DOI: 10.1016/J.Ympev.2008.07.002  0.425
2008 Burri R, Hirzel HN, Salamin N, Roulin A, Fumagalli L. Evolutionary patterns of MHC class II B in owls and their implications for the understanding of avian MHC evolution. Molecular Biology and Evolution. 25: 1180-91. PMID 18359775 DOI: 10.1093/Molbev/Msn065  0.437
2008 Bouchenak-Khelladi Y, Salamin N, Savolainen V, Forest F, Bank Mv, Chase MW, Hodkinson TR. Large multi-gene phylogenetic trees of the grasses (Poaceae): progress towards complete tribal and generic level sampling. Molecular Phylogenetics and Evolution. 47: 488-505. PMID 18358746 DOI: 10.1016/J.Ympev.2008.01.035  0.789
2008 Christin PA, Besnard G, Samaritani E, Duvall MR, Hodkinson TR, Savolainen V, Salamin N. Oligocene CO2 decline promoted C4 photosynthesis in grasses. Current Biology : Cb. 18: 37-43. PMID 18160293 DOI: 10.1016/J.Cub.2007.11.058  0.777
2007 Christin PA, Salamin N, Savolainen V, Duvall MR, Besnard G. C4 Photosynthesis evolved in grasses via parallel adaptive genetic changes. Current Biology : Cb. 17: 1241-7. PMID 17614282 DOI: 10.1016/J.Cub.2007.06.036  0.721
2007 Hodkinson TR, Waldren S, Parnell JA, Kelleher CT, Salamin K, Salamin N. DNA banking for plant breeding, biotechnology and biodiversity evaluation. Journal of Plant Research. 120: 17-29. PMID 17273892 DOI: 10.1007/S10265-006-0059-7  0.692
2007 Dubey S, Salamin N, Ohdachi SD, Barrière P, Vogel P. Molecular phylogenetics of shrews (Mammalia: Soricidae) reveal timing of transcontinental colonizations. Molecular Phylogenetics and Evolution. 44: 126-37. PMID 17267241 DOI: 10.1016/J.Ympev.2006.12.002  0.426
2007 Hodkinson TR, Salamin N, Chase MW, Bouchenak-Khelladi Y, Renvoize SA, Savolainen V. Large Trees, Supertrees, and Diversification of the Grass Family Aliso. 23: 248-258. DOI: 10.5642/Aliso.20072301.19  0.738
2006 Savolainen V, Lexer C, Anstett MC, Hutton I, Clarkson JJ, Norup MV, Powell MP, Springate D, Salamin N, Baker WJ. Evolutionary biology: Sympatric plant speciation in islands? (Reply) Nature. 443: E12-E13. PMID 17065986 DOI: 10.1038/Nature05217  0.644
2006 Flannery ML, Mitchell FJ, Coyne S, Kavanagh TA, Burke JI, Salamin N, Dowding P, Hodkinson TR. Plastid genome characterisation in Brassica and Brassicaceae using a new set of nine SSRs. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 113: 1221-31. PMID 16909279 DOI: 10.1007/S00122-006-0377-0  0.627
2006 Strauss SY, Webb CO, Salamin N. Exotic taxa less related to native species are more invasive. Proceedings of the National Academy of Sciences of the United States of America. 103: 5841-5. PMID 16581902 DOI: 10.1073/Pnas.0508073103  0.411
2006 Savolainen V, Anstett MC, Lexer C, Hutton I, Clarkson JJ, Norup MV, Powell MP, Springate D, Salamin N, Baker WJ. Sympatric speciation in palms on an oceanic island. Nature. 441: 210-3. PMID 16467788 DOI: 10.1038/Nature04566  0.638
2006 Mcgrath S, Hodkinson TR, Salamin N, Barth S. Development and testing of novel chloroplast microsatellite markers for Lolium perenne and other grasses (Poaceae) from de novo sequencing and in silico sequences Molecular Ecology Notes. 6: 449-452. DOI: 10.1111/J.1471-8286.2006.01267.X  0.626
2005 Rønsted N, Weiblen GD, Cook JM, Salamin N, Machado CA, Savolainen V. 60 million years of co-divergence in the fig-wasp symbiosis. Proceedings. Biological Sciences / the Royal Society. 272: 2593-9. PMID 16321781 DOI: 10.1098/Rspb.2005.3249  0.777
2005 Chase MW, Salamin N, Wilkinson M, Dunwell JM, Kesanakurthi RP, Haidar N, Savolainen V. Land plants and DNA barcodes: short-term and long-term goals. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 360: 1889-95. PMID 16214746 DOI: 10.1098/Rstb.2005.1720  0.619
2005 Salamin N, Hodkinson TR, Savolainen Coates V. Towards building the tree of life: a simulation study for all angiosperm genera. Systematic Biology. 54: 183-96. PMID 16012091 DOI: 10.1080/10635150590923254  0.729
2003 Salamin N, Chase MW, Hodkinson TR, Savolainen V. Assessing internal support with large phylogenetic DNA matrices. Molecular Phylogenetics and Evolution. 27: 528-39. PMID 12742757 DOI: 10.1016/S1055-7903(03)00011-3  0.748
2002 Hodkinson TR, Chase MW, Lledó MD, Salamin N, Renvoize SA. Phylogenetics of Miscanthus, Saccharum and related genera (Saccharinae, Andropogoneae, Poaceae) based on DNA sequences from ITS nuclear ribosomal DNA and plastid trnLintron and trnL-F intergenic spacers. Journal of Plant Research. 115: 381-92. PMID 12579363 DOI: 10.1007/S10265-002-0049-3  0.739
2002 Savolainen V, Chase MW, Salamin N, Soltis DE, Soltis PS, López AJ, Fédrigo O, Naylor GJ. Phylogeny reconstruction and functional constraints in organellar genomes: plastid atpB and rbcL sequences versus animal mitochondrion. Systematic Biology. 51: 638-47. PMID 12228005 DOI: 10.1080/10635150290102348  0.544
2002 Salamin N, Hodkinson TR, Savolainen V. Building supertrees: an empirical assessment using the grass family (Poaceae). Systematic Biology. 51: 136-50. PMID 11943096 DOI: 10.1080/106351502753475916  0.773
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