| Year |
Citation |
Score |
| 2013 |
Lima CSP, Carvalho B, Pellegrino R, Khater L, Chone CT, Lourenco GJ. Association of polymorphisms in genes related to cell cycle (ERP29, LEF1, MCC and PTCH1) and DNA transcription factors (IKBKAP and ZNF415) with base of tongue squamous cell carcinoma risk. Journal of Clinical Oncology. 31: 6073-6073. DOI: 10.1200/Jco.2013.31.15_Suppl.6073 |
0.355 |
|
| 2012 |
Lima CSP, Carvalho B, Pellegrino R, Khater L, Chone CT, Costa FF, Lourenco GJ. Base of tongue squamous cell carcinoma susceptibility: Novel candidate genetic polymorphisms identified in genome-wide association study. Journal of Clinical Oncology. 30. DOI: 10.1200/Jco.2012.30.15_Suppl.E16041 |
0.439 |
|
| 2011 |
Scharpf RB, Irizarry RA, Ritchie ME, Carvalho B, Ruczinski I. Using the R Package crlmm for Genotyping and Copy Number Estimation. Journal of Statistical Software. 40: 1-32. PMID 22523482 |
0.624 |
|
| 2011 |
Yegnasubramanian S, Wu Z, Haffner MC, Esopi D, Aryee MJ, Badrinath R, He TL, Morgan JD, Carvalho B, Zheng Q, De Marzo AM, Irizarry RA, Nelson WG. Chromosome-wide mapping of DNA methylation patterns in normal and malignant prostate cells reveals pervasive methylation of gene-associated and conserved intergenic sequences. Bmc Genomics. 12: 313. PMID 21669002 DOI: 10.1186/1471-2164-12-313 |
0.526 |
|
| 2011 |
Halper-Stromberg E, Frelin L, Ruczinski I, Scharpf R, Jie C, Carvalho B, Hao H, Hetrick K, Jedlicka A, Dziedzic A, Doheny K, Scott AF, Baylin S, Pevsner J, Spencer F, et al. Performance assessment of copy number microarray platforms using a spike-in experiment. Bioinformatics (Oxford, England). 27: 1052-60. PMID 21478196 DOI: 10.1093/Bioinformatics/Btr106 |
0.658 |
|
| 2011 |
Scharpf RB, Ruczinski I, Carvalho B, Doan B, Chakravarti A, Irizarry RA. A multilevel model to address batch effects in copy number estimation using SNP arrays. Biostatistics (Oxford, England). 12: 33-50. PMID 20625178 DOI: 10.1093/Biostatistics/Kxq043 |
0.692 |
|
| 2011 |
Scharpf RB, Irizarry RA, Ritchie ME, Carvalho B, Ruczinski I. Using the R Package crlmm for Genotyping and Copy Number Estimation. Journal of Statistical Software. 40: 1-32. DOI: 10.18637/Jss.V040.I12 |
0.645 |
|
| 2009 |
Carvalho B, Irizarry RA, Scharpf RB, Carey VJ. Processing and analyzing Affymetrix SNP chips with Bioconductor Statistics in Biosciences. 1: 160-180. DOI: 10.1007/S12561-009-9015-0 |
0.626 |
|
| 2008 |
Wang W, Carvalho B, Miller ND, Pevsner J, Chakravarti A, Irizarry RA. Estimating genome-wide copy number using allele-specific mixture models. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 15: 857-66. PMID 18707534 DOI: 10.1089/Cmb.2007.0148 |
0.675 |
|
| 2008 |
Tuefferd M, De Bondt A, Van Den Wyngaert I, Talloen W, Verbeke T, Carvalho B, Clevert DA, Alifano M, Raghavan N, Amaratunga D, Göhlmann H, Broët P, Camilleri-Broët S. Genome-wide copy number alterations detection in fresh frozen and matched FFPE samples using SNP 6.0 arrays. Genes, Chromosomes & Cancer. 47: 957-64. PMID 18663747 DOI: 10.1002/Gcc.20599 |
0.492 |
|
| 2008 |
Lin S, Carvalho B, Cutler DJ, Arking DE, Chakravarti A, Irizarry RA. Validation and extension of an empirical Bayes method for SNP calling on Affymetrix microarrays. Genome Biology. 9: R63. PMID 18387188 DOI: 10.1186/Gb-2008-9-4-R63 |
0.6 |
|
| 2008 |
Irizarry RA, Ladd-Acosta C, Carvalho B, Wu H, Brandenburg SA, Jeddeloh JA, Wen B, Feinberg AP. Comprehensive high-throughput arrays for relative methylation (CHARM). Genome Research. 18: 780-90. PMID 18316654 DOI: 10.1101/Gr.7301508 |
0.584 |
|
| 2008 |
Bengtsson H, Irizarry R, Carvalho B, Speed TP. Estimation and assessment of raw copy numbers at the single locus level Bioinformatics. 24: 759-767. PMID 18204055 DOI: 10.1093/Bioinformatics/Btn016 |
0.663 |
|
| 2007 |
Carvalho B, Bengtsson H, Speed TP, Irizarry RA. Exploration, normalization, and genotype calls of high-density oligonucleotide SNP array data. Biostatistics (Oxford, England). 8: 485-99. PMID 17189563 DOI: 10.1093/Biostatistics/Kxl042 |
0.648 |
|
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