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Evgeny Nudler - Publications

Affiliations: 
Basic Medical Science New York University, New York, NY, United States 
Area:
Molecular Biology, Microbiology Biology
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105 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Yang KB, Rasouly A, Epshtein V, Martinez C, Nguyen T, Shamovsky I, Nudler E. Persistence of backtracking by human RNA polymerase II. Molecular Cell. PMID 38340716 DOI: 10.1016/j.molcel.2024.01.019  0.391
2024 Vasilyev N, Liu MMJ, Epshtein V, Shamovsky I, Nudler E. General transcription factor from Escherichia coli with a distinct mechanism of action. Nature Structural & Molecular Biology. PMID 38177674 DOI: 10.1038/s41594-023-01154-w  0.466
2023 Yang KB, Rasouly A, Epshtein V, Martinez C, Nguyen T, Shamovsky I, Nudler E. Persistence of backtracking by human RNA polymerase II. Biorxiv : the Preprint Server For Biology. PMID 38168453 DOI: 10.1101/2023.12.13.571520  0.376
2023 Nudler E. Transcription-coupled global genomic repair in E. coli. Trends in Biochemical Sciences. 48: 873-882. PMID 37558547 DOI: 10.1016/j.tibs.2023.07.007  0.301
2023 Hao Z, Gowder M, Proshkin S, Bharati BK, Epshtein V, Svetlov V, Shamovsky I, Nudler E. RNA polymerase drives ribonucleotide excision DNA repair in E. coli. Cell. 186: 2425-2437.e21. PMID 37196657 DOI: 10.1016/j.cell.2023.04.029  0.403
2023 Weaver JW, Proshkin S, Duan W, Epshtein V, Gowder M, Bharati BK, Afanaseva E, Mironov A, Serganov A, Nudler E. Control of transcription elongation and DNA repair by alarmone ppGpp. Nature Structural & Molecular Biology. PMID 36997761 DOI: 10.1038/s41594-023-00948-2  0.406
2022 Nadon JF, Epshtein V, Cameron E, Samatov MR, Vasenko AS, Nudler E, Lafontaine DA. Site-specific photolabile roadblocks for the study of transcription elongation in biologically complex systems. Communications Biology. 5: 457. PMID 35552496 DOI: 10.1038/s42003-022-03382-0  0.385
2022 Bharati BK, Gowder M, Zheng F, Alzoubi K, Svetlov V, Kamarthapu V, Weaver JW, Epshtein V, Vasilyev N, Shen L, Zhang Y, Nudler E. Crucial role and mechanism of transcription-coupled DNA repair in bacteria. Nature. PMID 35355008 DOI: 10.1038/s41586-022-04530-6  0.307
2021 Hao Z, Svetlov V, Nudler E. Rho-dependent transcription termination: a revisionist view. Transcription. 12: 171-181. PMID 34705601 DOI: 10.1080/21541264.2021.1991773  0.488
2021 Wang B, Svetlov V, Wolf YI, Koonin EV, Nudler E, Artsimovitch I. Allosteric Activation of SARS-CoV-2 RNA-Dependent RNA Polymerase by Remdesivir Triphosphate and Other Phosphorylated Nucleotides. Mbio. e0142321. PMID 34154407 DOI: 10.1128/mBio.01423-21  0.404
2021 Wang B, Svetlov V, Wolf YI, Koonin EV, Nudler E, Artsimovitch I. Allosteric activation of SARS-CoV-2 RdRp by remdesivir triphosphate and other phosphorylated nucleotides. Biorxiv : the Preprint Server For Biology. PMID 33948598 DOI: 10.1101/2021.01.24.428004  0.365
2020 Hao Z, Epshtein V, Kim KH, Proshkin S, Svetlov V, Kamarthapu V, Bharati B, Mironov A, Walz T, Nudler E. Pre-termination Transcription Complex: Structure and Function. Molecular Cell. PMID 33296676 DOI: 10.1016/j.molcel.2020.11.013  0.472
2020 Wu X, Siggel M, Ovchinnikov S, Mi W, Svetlov V, Nudler E, Liao M, Hummer G, Rapoport TA. Structural basis of ER-associated protein degradation mediated by the Hrd1 ubiquitin ligase complex. Science (New York, N.Y.). 368. PMID 32327568 DOI: 10.1126/Science.Aaz2449  0.303
2019 Svetlov V, Nudler E. Towards the unified principles of transcription termination. The Embo Journal. e104112. PMID 31886560 DOI: 10.15252/Embj.2019104112  0.449
2019 Magán A, Amman F, El-Isa F, Hartl N, Shamovsky I, Nudler E, Schroeder R, Sedlyarova N. iRAPs curb antisense transcription in E. coli. Nucleic Acids Research. PMID 31535128 DOI: 10.1093/Nar/Gkz791  0.57
2019 Luhachack L, Rasouly A, Shamovsky I, Nudler E. Transcription factor YcjW controls the emergency HS production in E. coli. Nature Communications. 10: 2868. PMID 31253770 DOI: 10.1038/S41467-019-10785-X  0.412
2019 Hou L, Wang Y, Liu Y, Zhang N, Shamovsky I, Nudler E, Tian B, Dynlacht BD. Paf1C regulates RNA polymerase II progression by modulating elongation rate. Proceedings of the National Academy of Sciences of the United States of America. PMID 31249142 DOI: 10.1073/Pnas.1904324116  0.461
2019 Valencia-Sánchez MI, De Ioannes P, Wang M, Vasilyev N, Chen R, Nudler E, Armache JP, Armache KJ. Structural Basis of Dot1L Stimulation by Histone H2B Lysine 120 Ubiquitination. Molecular Cell. PMID 30981630 DOI: 10.1016/J.Molcel.2019.03.029  0.343
2018 Svetlov V, Nudler E. Reading of the non-template DNA by transcription elongation factors. Molecular Microbiology. PMID 29757477 DOI: 10.1111/Mmi.13984  0.505
2018 Rasouly A, Nudler E. Antibiotic killing through oxidized nucleotides. Proceedings of the National Academy of Sciences of the United States of America. PMID 29444858 DOI: 10.1073/Pnas.1800255115  0.388
2017 Demo G, Rasouly A, Vasilyev N, Svetlov V, Loveland AB, Diaz-Avalos R, Grigorieff N, Nudler E, Korostelev AA. Structure of RNA polymerase bound to ribosomal 30S subunit. Elife. 6. PMID 29027901 DOI: 10.7554/Elife.28560  0.535
2017 Sedlyarova N, Rescheneder P, Magán A, Popitsch N, Rziha N, Bilusic I, Epshtein V, Zimmermann B, Lybecker M, Sedlyarov V, Schroeder R, Nudler E. Natural RNA Polymerase Aptamers Regulate Transcription in E. coli. Molecular Cell. PMID 28648779 DOI: 10.1016/J.Molcel.2017.05.025  0.568
2017 Epshtein V, Kamarthapu V, Nudler E. Strategies and Methods of Transcription-Coupled Repair Studies In Vitro and In Vivo. Methods in Enzymology. 591: 287-306. PMID 28645373 DOI: 10.1016/Bs.Mie.2017.03.014  0.475
2017 Pani B, Nudler E. Mechanistic insights into transcription coupled DNA repair. Dna Repair. PMID 28629777 DOI: 10.1016/J.Dnarep.2017.06.006  0.503
2017 Mironov A, Seregina T, Nagornykh M, Luhachack LG, Korolkova N, Lopes LE, Kotova V, Zavilgelsky G, Shakulov R, Shatalin K, Nudler E. Mechanism of H2S-mediated protection against oxidative stress in Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. PMID 28533366 DOI: 10.1073/Pnas.1703576114  0.31
2017 Demo G, Rasouly A, Vasilyev N, Svetlov V, Loveland AB, Diaz-Avalos R, Grigorieff N, Nudler E, Korostelev AA. Author response: Structure of RNA polymerase bound to ribosomal 30S subunit Elife. DOI: 10.7554/Elife.28560.031  0.449
2016 Rasouly A, Pani B, Nudler E. A Magic Spot in Genome Maintenance. Trends in Genetics : Tig. PMID 27931778 DOI: 10.1016/J.Tig.2016.11.002  0.403
2016 Sedlyarova N, Shamovsky I, Bharati BK, Epshtein V, Chen J, Gottesman S, Schroeder R, Nudler E. sRNA-Mediated Control of Transcription Termination in E. coli. Cell. 167: 111-121.e13. PMID 27662085 DOI: 10.1016/J.Cell.2016.09.004  0.536
2016 Kamarthapu V, Epshtein V, Benjamin B, Proshkin S, Mironov A, Cashel M, Nudler E. ppGpp couples transcription to DNA repair in E. coli. Science (New York, N.Y.). 352: 993-6. PMID 27199428 DOI: 10.1126/Science.Aad6945  0.438
2015 Sekine S, Murayama Y, Svetlov V, Nudler E, Yokoyama S. Ratcheting of RNA polymerase toward structural principles of RNA polymerase operations. Transcription. 6: 56-60. PMID 26226152 DOI: 10.1080/21541264.2015.1059922  0.362
2015 Sekine S, Murayama Y, Svetlov V, Nudler E, Yokoyama S. The ratcheted and ratchetable structural states of RNA polymerase underlie multiple transcriptional functions. Molecular Cell. 57: 408-21. PMID 25601758 DOI: 10.1016/J.Molcel.2014.12.014  0.539
2015 Kamarthapu V, Nudler E. Rethinking transcription coupled DNA repair. Current Opinion in Microbiology. 24: 15-20. PMID 25596348 DOI: 10.1016/J.Mib.2014.12.005  0.399
2015 Mejia YX, Nudler E, Bustamante C. Trigger loop folding determines transcription rate of Escherichia coli's RNA polymerase. Proceedings of the National Academy of Sciences of the United States of America. 112: 743-8. PMID 25552559 DOI: 10.1073/Pnas.1421067112  0.496
2014 Vera M, Pani B, Griffiths LA, Muchardt C, Abbott CM, Singer RH, Nudler E. The translation elongation factor eEF1A1 couples transcription to translation during heat shock response. Elife. 3: e03164. PMID 25233275 DOI: 10.7554/Elife.03164  0.445
2014 Luhachack L, Nudler E. Bacterial gasotransmitters: an innate defense against antibiotics. Current Opinion in Microbiology. 21: 13-7. PMID 25078319 DOI: 10.1016/J.Mib.2014.06.017  0.31
2014 Proshkin S, Mironov A, Nudler E. Riboswitches in regulation of Rho-dependent transcription termination. Biochimica Et Biophysica Acta. 1839: 974-977. PMID 24731855 DOI: 10.1016/J.Bbagrm.2014.04.002  0.517
2014 Epshtein V, Kamarthapu V, McGary K, Svetlov V, Ueberheide B, Proshkin S, Mironov A, Nudler E. UvrD facilitates DNA repair by pulling RNA polymerase backwards. Nature. 505: 372-7. PMID 24402227 DOI: 10.1038/Nature12928  0.527
2014 Vera M, Pani B, Griffiths LA, Muchardt C, Abbott CM, Singer RH, Nudler E. Author response: The translation elongation factor eEF1A1 couples transcription to translation during heat shock response Elife. DOI: 10.7554/Elife.03164.024  0.314
2014 Shatalin K, Nudler E. S7-6 Role of H2S and NO in Bacillus anthracis spore formation and virulence Nitric Oxide. 39: S10. DOI: 10.1016/J.Niox.2014.03.036  0.303
2013 Helmrich A, Ballarino M, Nudler E, Tora L. Transcription-replication encounters, consequences and genomic instability. Nature Structural & Molecular Biology. 20: 412-8. PMID 23552296 DOI: 10.1038/Nsmb.2543  0.482
2013 McGary K, Nudler E. RNA polymerase and the ribosome: the close relationship. Current Opinion in Microbiology. 16: 112-7. PMID 23433801 DOI: 10.1016/J.Mib.2013.01.010  0.543
2013 Gusarov I, Gautier L, Smolentseva O, Shamovsky I, Eremina S, Mironov A, Nudler E. Bacterial nitric oxide extends the lifespan of C. elegans. Cell. 152: 818-30. PMID 23415229 DOI: 10.1016/J.Cell.2012.12.043  0.317
2013 Svetlov V, Nudler E. Looking for a promoter in 3D. Nature Structural & Molecular Biology. 20: 141-2. PMID 23381630 DOI: 10.1038/Nsmb.2498  0.426
2013 Serganov A, Nudler E. A decade of riboswitches. Cell. 152: 17-24. PMID 23332744 DOI: 10.1016/J.Cell.2012.12.024  0.42
2013 Nedialkov YA, Opron K, Assaf F, Artsimovitch I, Kireeva ML, Kashlev M, Cukier RI, Nudler E, Burton ZF. The RNA polymerase bridge helix YFI motif in catalysis, fidelity and translocation. Biochimica Et Biophysica Acta. 1829: 187-98. PMID 23202476 DOI: 10.1016/J.Bbagrm.2012.11.005  0.463
2013 Svetlov V, Nudler E. Basic mechanism of transcription by RNA polymerase II. Biochimica Et Biophysica Acta. 1829: 20-8. PMID 22982365 DOI: 10.1016/J.Bbagrm.2012.08.009  0.522
2012 Nedialkov YA, Nudler E, Burton ZF. RNA polymerase stalls in a post-translocated register and can hyper-translocate. Transcription. 3: 260-9. PMID 23132506 DOI: 10.4161/trns.22307  0.407
2012 Svetlov V, Nudler E. Unfolding the bridge between transcription and translation. Cell. 150: 243-5. PMID 22817886 DOI: 10.1016/J.Cell.2012.06.025  0.364
2012 Nudler E. RNA polymerase backtracking in gene regulation and genome instability. Cell. 149: 1438-45. PMID 22726433 DOI: 10.1016/J.Cell.2012.06.003  0.527
2012 Gusarov I, Nudler E. S-nitrosylation signaling in Escherichia coli. Science Signaling. 5: pe26. PMID 22692422 DOI: 10.1126/Scisignal.2003181  0.362
2012 Hollands K, Proshkin S, Sklyarova S, Epshtein V, Mironov A, Nudler E, Groisman EA. Riboswitch control of Rho-dependent transcription termination. Proceedings of the National Academy of Sciences of the United States of America. 109: 5376-81. PMID 22431636 DOI: 10.1073/Pnas.1112211109  0.533
2012 Svetlov V, Artsimovitch I, Nudler E. Response to Klyuyev and Vassylyev: on the mechanism of tagetitoxin inhibition of transcription. Transcription. 3: 51-5. PMID 22414748 DOI: 10.4161/trns.19749  0.321
2012 Gusarov I, Smolentseva O, Gautier L, Nudler E. Nitric oxide produced by bacteria extends Caenorhabditis elegans lifespan Nitric Oxide. 27: S46-S50. DOI: 10.1016/J.Niox.2012.04.164  0.304
2011 Artsimovitch I, Svetlov V, Nemetski SM, Epshtein V, Cardozo T, Nudler E. Tagetitoxin inhibits RNA polymerase through trapping of the trigger loop. The Journal of Biological Chemistry. 286: 40395-400. PMID 21976682 DOI: 10.1074/Jbc.M111.300889  0.504
2011 Dutta D, Shatalin K, Epshtein V, Gottesman ME, Nudler E. Linking RNA polymerase backtracking to genome instability in E. coli. Cell. 146: 533-43. PMID 21854980 DOI: 10.1016/J.Cell.2011.07.034  0.523
2011 Svetlov V, Nudler E. Clamping the clamp of RNA polymerase. The Embo Journal. 30: 1190-1. PMID 21468097 DOI: 10.1038/Emboj.2011.76  0.349
2011 Maoiléidigh DO, Tadigotla VR, Nudler E, Ruckenstein AE. A unified model of transcription elongation: what have we learned from single-molecule experiments? Biophysical Journal. 100: 1157-66. PMID 21354388 DOI: 10.1016/J.Bpj.2010.12.3734  0.49
2010 Proshkin S, Rahmouni AR, Mironov A, Nudler E. Cooperation between translating ribosomes and RNA polymerase in transcription elongation. Science (New York, N.Y.). 328: 504-8. PMID 20413502 DOI: 10.1126/Science.1184939  0.518
2010 Epshtein V, Dutta D, Wade J, Nudler E. An allosteric mechanism of Rho-dependent transcription termination. Nature. 463: 245-9. PMID 20075920 DOI: 10.1038/Nature08669  0.555
2010 Epshtein V, Dutta D, Wade J, Nudler E. Erratum: An allosteric mechanism of Rho-dependent transcription termination Nature. 466: 1006-1006. DOI: 10.1038/Nature09360  0.341
2009 Svetlov V, Nudler E. Macromolecular micromovements: how RNA polymerase translocates. Current Opinion in Structural Biology. 19: 701-7. PMID 19889534 DOI: 10.1016/J.Sbi.2009.10.002  0.499
2009 Nudler E. RNA polymerase active center: the molecular engine of transcription. Annual Review of Biochemistry. 78: 335-61. PMID 19489723 DOI: 10.1146/Annurev.Biochem.76.052705.164655  0.5
2009 Shen X, Banga S, Liu Y, Xu L, Gao P, Shamovsky I, Nudler E, Luo ZQ. Targeting eEF1A by a Legionella pneumophila effector leads to inhibition of protein synthesis and induction of host stress response. Cellular Microbiology. 11: 911-26. PMID 19386084 DOI: 10.1111/J.1462-5822.2009.01301.X  0.326
2009 Shamovsky I, Nudler E. Isolation and characterization of the heat shock RNA 1. Methods in Molecular Biology (Clifton, N.J.). 540: 265-79. PMID 19381566 DOI: 10.1007/978-1-59745-558-9_19  0.461
2009 Mironov A, Epshtein V, Nudler E. Transcriptional approaches to riboswitch studies. Methods in Molecular Biology (Clifton, N.J.). 540: 39-51. PMID 19381551 DOI: 10.1007/978-1-59745-558-9_4  0.529
2009 Belogurov GA, Vassylyeva MN, Sevostyanova A, Appleman JR, Xiang AX, Lira R, Webber SE, Klyuyev S, Nudler E, Artsimovitch I, Vassylyev DG. Transcription inactivation through local refolding of the RNA polymerase structure. Nature. 457: 332-5. PMID 18946472 DOI: 10.1038/Nature07510  0.518
2008 Svetlov V, Nudler E. Jamming the ratchet of transcription. Nature Structural & Molecular Biology. 15: 777-9. PMID 18679430 DOI: 10.1038/Nsmb0808-777  0.519
2008 Cardinale CJ, Washburn RS, Tadigotla VR, Brown LM, Gottesman ME, Nudler E. Termination factor Rho and its cofactors NusA and NusG silence foreign DNA in E. coli. Science (New York, N.Y.). 320: 935-8. PMID 18487194 DOI: 10.1126/Science.1152763  0.766
2008 Gusarov I, Starodubtseva M, Wang ZQ, McQuade L, Lippard SJ, Stuehr DJ, Nudler E. Bacterial nitric-oxide synthases operate without a dedicated redox partner. The Journal of Biological Chemistry. 283: 13140-7. PMID 18316370 DOI: 10.1074/Jbc.M710178200  0.344
2008 Shamovsky I, Nudler E. Modular RNA heats up. Molecular Cell. 29: 415-7. PMID 18313380 DOI: 10.1016/J.Molcel.2008.02.001  0.481
2008 Borukhov S, Nudler E. RNA polymerase: the vehicle of transcription. Trends in Microbiology. 16: 126-34. PMID 18280161 DOI: 10.1016/J.Tim.2007.12.006  0.542
2008 Shamovsky I, Nudler E. New insights into the mechanism of heat shock response activation. Cellular and Molecular Life Sciences : Cmls. 65: 855-61. PMID 18239856 DOI: 10.1007/S00018-008-7458-Y  0.302
2007 Epshtein V, Cardinale CJ, Ruckenstein AE, Borukhov S, Nudler E. An allosteric path to transcription termination. Molecular Cell. 28: 991-1001. PMID 18158897 DOI: 10.1016/J.Molcel.2007.10.011  0.788
2007 Bocobza S, Adato A, Mandel T, Shapira M, Nudler E, Aharoni A. Riboswitch-dependent gene regulation and its evolution in the plant kingdom. Genes & Development. 21: 2874-9. PMID 18006684 DOI: 10.1101/Gad.443907  0.39
2006 Shamovsky I, Nudler E. Gene control by large noncoding RNAs. Science's Stke : Signal Transduction Knowledge Environment. 2006: pe40. PMID 17018852 DOI: 10.1126/Stke.3552006Pe40  0.47
2006 Wade JT, Castro Roa D, Grainger DC, Hurd D, Busby SJ, Struhl K, Nudler E. Extensive functional overlap between sigma factors in Escherichia coli. Nature Structural & Molecular Biology. 13: 806-14. PMID 16892065 DOI: 10.1038/Nsmb1130  0.474
2006 Mirkin EV, Castro Roa D, Nudler E, Mirkin SM. Transcription regulatory elements are punctuation marks for DNA replication. Proceedings of the National Academy of Sciences of the United States of America. 103: 7276-81. PMID 16670199 DOI: 10.1073/Pnas.0601127103  0.529
2006 Shamovsky I, Ivannikov M, Kandel ES, Gershon D, Nudler E. RNA-mediated response to heat shock in mammalian cells. Nature. 440: 556-60. PMID 16554823 DOI: 10.1038/Nature04518  0.396
2006 Tadigotla VR, O Maoiléidigh D, Sengupta AM, Epshtein V, Ebright RH, Nudler E, Ruckenstein AE. Thermodynamic and kinetic modeling of transcriptional pausing. Proceedings of the National Academy of Sciences of the United States of America. 103: 4439-44. PMID 16537373 DOI: 10.1073/Pnas.0600508103  0.545
2006 Barash D, Sikorski J, Perry EB, Nevo E, Nudler E. Adaptive Mutations In RNA-Based Regulatory Mechanisms: Computational and Experimental Investigations Israel Journal of Ecology and Evolution. 52: 263-279. DOI: 10.1560/Ijee_52_3-4_263  0.443
2005 Bar-Nahum G, Epshtein V, Ruckenstein AE, Rafikov R, Mustaev A, Nudler E. A ratchet mechanism of transcription elongation and its control. Cell. 120: 183-93. PMID 15680325 DOI: 10.1016/J.Cell.2004.11.045  0.738
2004 Nudler E, Mironov AS. The riboswitch control of bacterial metabolism. Trends in Biochemical Sciences. 29: 11-7. PMID 14729327 DOI: 10.1016/J.Tibs.2003.11.004  0.456
2003 Nudler E, Gusarov I. Analysis of the intrinsic transcription termination mechanism and its control. Methods in Enzymology. 371: 369-82. PMID 14712715 DOI: 10.1016/S0076-6879(03)71028-3  0.479
2003 Nudler E, Avetissova E, Korzheva N, Mustaev A. Characterization of protein-nucleic acid interactions that are required for transcription processivity. Methods in Enzymology. 371: 179-90. PMID 14712700 DOI: 10.1016/S0076-6879(03)71013-1  0.533
2003 Nudler E, Gusarov I, Bar-Nahum G. Methods of walking with the RNA polymerase. Methods in Enzymology. 371: 160-9. PMID 14712698 DOI: 10.1016/S0076-6879(03)71011-8  0.745
2003 Epshtein V, Toulmé F, Rahmouni AR, Borukhov S, Nudler E. Transcription through the roadblocks: the role of RNA polymerase cooperation. The Embo Journal. 22: 4719-27. PMID 12970184 DOI: 10.1093/Emboj/Cdg452  0.569
2003 Borukhov S, Nudler E. RNA polymerase holoenzyme: structure, function and biological implications. Current Opinion in Microbiology. 6: 93-100. PMID 12732296 DOI: 10.1016/S1369-5274(03)00036-5  0.546
2003 Epshtein V, Nudler E. Cooperation between RNA polymerase molecules in transcription elongation. Science (New York, N.Y.). 300: 801-5. PMID 12730602 DOI: 10.1126/Science.1083219  0.52
2003 Epshtein V, Mironov AS, Nudler E. The riboswitch-mediated control of sulfur metabolism in bacteria. Proceedings of the National Academy of Sciences of the United States of America. 100: 5052-6. PMID 12702767 DOI: 10.1073/Pnas.0531307100  0.499
2002 Kandel ES, Nudler E. Template switching by RNA polymerase II in vivo. Evidence and implications from a retroviral system. Molecular Cell. 10: 1495-502. PMID 12504023 DOI: 10.1016/S1097-2765(02)00777-3  0.482
2002 Mironov AS, Gusarov I, Rafikov R, Lopez LE, Shatalin K, Kreneva RA, Perumov DA, Nudler E. Sensing small molecules by nascent RNA: a mechanism to control transcription in bacteria. Cell. 111: 747-56. PMID 12464185 DOI: 10.1016/S0092-8674(02)01134-0  0.551
2002 Nudler E, Gottesman ME. Transcription termination and anti-termination in E. coli. Genes to Cells : Devoted to Molecular & Cellular Mechanisms. 7: 755-68. PMID 12167155 DOI: 10.1046/J.1365-2443.2002.00563.X  0.489
2002 Gusarov I, Nudler E. Control of intrinsic transcription termination by N and NusA: the basic mechanisms. Cell. 107: 437-49. PMID 11719185 DOI: 10.1016/S0092-8674(01)00582-7  0.528
2001 Bar-Nahum G, Nudler E. Isolation and characterization of sigma(70)-retaining transcription elongation complexes from Escherichia coli. Cell. 106: 443-51. PMID 11525730 DOI: 10.1016/S0092-8674(01)00461-5  0.746
1999 Korzheva N, Mustaev A, Nudler E, Nikiforov V, Goldfarb A. Mechanistic model of the elongation complex of Escherichia coli RNA polymerase. Cold Spring Harbor Symposia On Quantitative Biology. 63: 337-45. PMID 10384298 DOI: 10.1101/Sqb.1998.63.337  0.502
1999 Nudler E. Transcription elongation: structural basis and mechanisms. Journal of Molecular Biology. 288: 1-12. PMID 10329121 DOI: 10.1006/Jmbi.1999.2641  0.534
1999 Gusarov I, Nudler E. The mechanism of intrinsic transcription termination. Molecular Cell. 3: 495-504. PMID 10230402 DOI: 10.1016/S1097-2765(00)80477-3  0.56
1998 Nudler E, Gusarov I, Avetissova E, Kozlov M, Goldfarb A. Spatial organization of transcription elongation complex in Escherichia coli. Science (New York, N.Y.). 281: 424-8. PMID 9665887 DOI: 10.1126/Science.281.5375.424  0.527
1997 Nudler E, Mustaev A, Lukhtanov E, Goldfarb A. The RNA-DNA hybrid maintains the register of transcription by preventing backtracking of RNA polymerase. Cell. 89: 33-41. PMID 9094712 DOI: 10.1016/S0092-8674(00)80180-4  0.558
1997 Kashlev M, Nudler E, Severinov K, Borukhov S, Komissarova N, Goldfarb A. Histidine-tagged RNA polymerase of Escherichia coli and transcription in solid phase. Methods in Enzymology. 274: 326-34. PMID 8902816 DOI: 10.1016/S0076-6879(96)74028-4  0.532
1996 Nudler E, Avetissova E, Markovtsov V, Goldfarb A. Transcription processivity: protein-DNA interactions holding together the elongation complex. Science (New York, N.Y.). 273: 211-7. PMID 8662499 DOI: 10.1126/Science.273.5272.211  0.504
1995 Nudler E, Kashlev M, Nikiforov V, Goldfarb A. Coupling between transcription termination and RNA polymerase inchworming. Cell. 81: 351-7. PMID 7736587 DOI: 10.1016/0092-8674(95)90388-7  0.558
1994 Nudler E, Goldfarb A, Kashlev M. Discontinuous mechanism of transcription elongation. Science (New York, N.Y.). 265: 793-6. PMID 8047884 DOI: 10.1126/Science.8047884  0.543
1994 Bezanilla M, Drake B, Nudler E, Kashlev M, Hansma PK, Hansma HG. Motion and enzymatic degradation of DNA in the atomic force microscope. Biophysical Journal. 67: 2454-9. PMID 7696484 DOI: 10.1016/S0006-3495(94)80733-7  0.301
1993 Kashlev M, Nudler E, Goldfarb A, White T, Kutter E. Bacteriophage T4 Alc protein: A transcription termination factor sensing local modification of DNA Cell. 75: 147-154. DOI: 10.1016/S0092-8674(05)80091-1  0.473
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