| Year |
Citation |
Score |
| 2020 |
Wang X, Allen M, Li S, Quicksall ZS, Patel TA, Carnwath TP, Reddy JS, Carrasquillo MM, Lincoln SJ, Nguyen TT, Malphrus KG, Dickson DW, Crook JE, Asmann YW, Ertekin-Taner N. Deciphering cellular transcriptional alterations in Alzheimer's disease brains. Molecular Neurodegeneration. 15: 38. PMID 32660529 DOI: 10.1186/S13024-020-00392-6 |
0.327 |
|
| 2020 |
Ren Y, Cherukuri Y, Wickland DP, Sarangi V, Tian S, Carter JM, Mansfield AS, Block MS, Sherman ME, Knutson KL, Lin Y, Asmann YW. HLA class-I and class-II restricted neoantigen loads predict overall survival in breast cancer. Oncoimmunology. 9: 1744947. PMID 32523802 DOI: 10.1080/2162402X.2020.1744947 |
0.308 |
|
| 2020 |
Zhou X, Nicholson AM, Ren Y, Brooks M, Jiang P, Zuberi A, Phuoc HN, Perkerson RB, Matchett B, Parsons TM, Finch NA, Lin W, Qiao W, Castanedes-Casey M, Phillips V, ... ... Asmann Y, et al. Loss of TMEM106B leads to myelination deficits: implications for frontotemporal dementia treatment strategies. Brain : a Journal of Neurology. PMID 32504082 DOI: 10.1093/Brain/Awaa141 |
0.317 |
|
| 2020 |
Zhao N, Ren Y, Yamazaki Y, Qiao W, Li F, Felton LM, Mahmoudiandehkordi S, Kueider-Paisley A, Sonoustoun B, Arnold M, Shue F, Zheng J, Attrebi ON, Martens YA, Li Z, ... ... Asmann YW, et al. Alzheimer's Risk Factors Age, APOE Genotype, and Sex Drive Distinct Molecular Pathways. Neuron. PMID 32199103 DOI: 10.1016/J.Neuron.2020.02.034 |
0.304 |
|
| 2020 |
Chandrashekar P, Ahmadinejad N, Wang J, Sekulic A, Egan JB, Asmann YW, Kumar S, Maley C, Liu L. Somatic selection distinguishes oncogenes and tumor suppressor genes. Bioinformatics (Oxford, England). 36: 1712-1717. PMID 32176769 DOI: 10.1093/Bioinformatics/Btz851 |
0.341 |
|
| 2020 |
Hartert KT, Wenzl K, Krull JE, Manske M, Sarangi V, Asmann Y, Larson MC, Maurer MJ, Slager S, Macon WR, King RL, Feldman AL, Gandhi AK, Link BK, Habermann TM, et al. Targeting of inflammatory pathways with R2CHOP in high-risk DLBCL. Leukemia. PMID 32139889 DOI: 10.1038/S41375-020-0766-4 |
0.354 |
|
| 2020 |
Carrano A, Phillipps J, Lara-Velazquez M, Zarco N, Suarez-Meade P, Chaichana K, Quinones-Hinojosa A, Asmann Y, Guerrero-Cázares H. Abstract 1574: The role of human cerebrospinal fluid in glioblastoma malignancy Cancer Research. 80: 1574-1574. DOI: 10.1158/1538-7445.Am2020-1574 |
0.308 |
|
| 2019 |
Kleinstern G, Yan H, Hildebrandt MAT, Vijai J, Berndt SI, Ghesquières H, McKay J, Wang SS, Nieters A, Ye Y, Monnereau A, Brooks-Wilson AR, Lan Q, Melbye M, Jackson RD, ... ... Asmann Y, et al. Inherited variants at 3q13.33 and 3p24.1 are associated with risk of diffuse large B-cell lymphoma and implicate immune pathways. Human Molecular Genetics. PMID 31600786 DOI: 10.1093/Hmg/Ddz228 |
0.349 |
|
| 2019 |
Dickson DW, Baker MC, Jackson JL, DeJesus-Hernandez M, Finch NA, Tian S, Heckman MG, Pottier C, Gendron TF, Murray ME, Ren Y, Reddy JS, Graff-Radford NR, Boeve BF, Petersen RC, ... ... Asmann YW, et al. Extensive transcriptomic study emphasizes importance of vesicular transport in C9orf72 expansion carriers. Acta Neuropathologica Communications. 7: 150. PMID 31594549 DOI: 10.1186/S40478-019-0797-0 |
0.34 |
|
| 2019 |
Ebbert MTW, Jensen TD, Jansen-West K, Sens JP, Reddy JS, Ridge PG, Kauwe JSK, Belzil V, Pregent L, Carrasquillo MM, Keene D, Larson E, Crane P, Asmann YW, Ertekin-Taner N, et al. Systematic analysis of dark and camouflaged genes reveals disease-relevant genes hiding in plain sight. Genome Biology. 20: 97. PMID 31104630 DOI: 10.1186/S13059-019-1707-2 |
0.357 |
|
| 2019 |
Pottier C, Ren Y, Perkerson RB, Baker M, Jenkins GD, van Blitterswijk M, DeJesus-Hernandez M, van Rooij JGJ, Murray ME, Christopher E, McDonnell SK, Fogarty Z, Batzler A, Tian S, Vicente CT, ... ... Asmann Y, et al. Genome-wide analyses as part of the international FTLD-TDP whole-genome sequencing consortium reveals novel disease risk factors and increases support for immune dysfunction in FTLD. Acta Neuropathologica. PMID 30739198 DOI: 10.1007/S00401-019-01962-9 |
0.402 |
|
| 2019 |
Rahman ZA, Cherukuri Y, Heckman M, Finn LE, Cerhan JR, Asmann YW, Foran JM. Evaluation of etiologic genetic polymorphisms by whole exome sequencing (WES) in the Mayo Clinic AML epidemiology cohort (MCAEC). Journal of Clinical Oncology. 37: 7021-7021. DOI: 10.1200/Jco.2019.37.15_Suppl.7021 |
0.367 |
|
| 2019 |
Clay-Gilmour AI, Hildebrandt M, Asmann Y, Brown EE, Hofmann JN, Spinelli J, Giles G, Bhatti P, Cozen W, Robinson DP, O'Brien DR, Rajkumar SV, Tian S, Berndt SI, Chanock SJ, et al. Association between a Polygenic Risk Score for Multiple Myeloma Risk and Overall Survival Blood. 134: 4366-4366. DOI: 10.1182/Blood-2019-126088 |
0.317 |
|
| 2019 |
Wenzl K, Ortiz M, Stong N, Huang CC, Maurer MJ, Towfic F, Hagner PR, Nikbakht H, Stokes M, Lata S, Kamalakaran S, Mavrommatis K, Trotter M, King RL, Link BK, ... ... Asmann Y, et al. Genomic Landscape Including Novel Mutational Drivers in Relapsed/Refractory Diffuse Large B Cell Lymphoma Blood. 134: 919-919. DOI: 10.1182/Blood-2019-123694 |
0.306 |
|
| 2019 |
Allen M, Reddy JS, Carrasquillo MM, Wang X, Lincoln SJ, Nguyen T, Malphrus KG, Asmann YW, Murray ME, Bu G, Dickson DW, Ertekin-Taner N. INTEGRATIVE GENOMIC PROFILING TO IDENTIFY GENES AND PATHWAYS ASSOCIATED WITH VASCULAR RISK IN AD Alzheimer's & Dementia. 15: P1617. DOI: 10.1016/J.Jalz.2019.06.4843 |
0.334 |
|
| 2018 |
Wenzl K, Manske MK, Sarangi V, Asmann YW, Greipp PT, Schoon HR, Braggio E, Maurer MJ, Feldman AL, Witzig TE, Slager SL, Ansell SM, Cerhan JR, Novak AJ. Loss of TNFAIP3 enhances MYD88-driven signaling in non-Hodgkin lymphoma. Blood Cancer Journal. 8: 97. PMID 30301877 DOI: 10.1038/S41408-018-0130-3 |
0.341 |
|
| 2018 |
Allen M, Wang X, Serie DJ, Strickland SL, Burgess JD, Koga S, Younkin CS, Nguyen TT, Malphrus KG, Lincoln SJ, Alamprese M, Zhu K, Chang R, Carrasquillo MM, Kouri N, ... ... Asmann YW, et al. Divergent brain gene expression patterns associate with distinct cell-specific tau neuropathology traits in progressive supranuclear palsy. Acta Neuropathologica. PMID 30136084 DOI: 10.1007/S00401-018-1900-5 |
0.354 |
|
| 2018 |
Ren Y, van Blitterswijk M, Allen M, Carrasquillo MM, Reddy JS, Wang X, Beach TG, Dickson DW, Ertekin-Taner N, Asmann YW, Rademakers R. TMEM106B haplotypes have distinct gene expression patterns in aged brain. Molecular Neurodegeneration. 13: 35. PMID 29970152 DOI: 10.1186/S13024-018-0268-2 |
0.338 |
|
| 2018 |
Fama A, Xiang J, Link BK, Allmer C, Klinzman D, Feldman AL, Nowakowski GS, Liebow M, Larson MC, Maurer MJ, Ansell SM, Novak AJ, Asmann YW, Slager SL, Call TG, et al. Human Pegivirus infection and lymphoma risk and prognosis: a North American study. British Journal of Haematology. PMID 29808922 DOI: 10.1111/Bjh.15416 |
0.304 |
|
| 2018 |
Ren Y, Reddy JS, Pottier C, Sarangi V, Tian S, Sinnwell JP, McDonnell SK, Biernacka JM, Carrasquillo MM, Ross OA, Ertekin-Taner N, Rademakers R, Hudson M, Mainzer LS, Asmann YW. Identification of missing variants by combining multiple analytic pipelines. Bmc Bioinformatics. 19: 139. PMID 29661148 DOI: 10.1186/S12859-018-2151-0 |
0.333 |
|
| 2017 |
Bernatsky S, Velásquez García HA, Spinelli JJ, Gaffney P, Smedby KE, Ramsey-Goldman R, Wang SS, Adami HO, Albanes D, Angelucci E, Ansell SM, Asmann YW, Becker N, Benavente Y, Berndt SI, et al. Lupus-related single nucleotide polymorphisms and risk of diffuse large B-cell lymphoma. Lupus Science & Medicine. 4: e000187. PMID 29214033 DOI: 10.1136/Lupus-2016-000187 |
0.314 |
|
| 2017 |
Davila JI, Starr JS, Attia S, Wang C, Knudson RA, Necela BM, Sarangi V, Sun Z, Ren Y, Casler JD, Menke DM, Oliver GR, Joseph RW, Copland JA, Parker AS, ... ... Asmann YW, et al. Comprehensive Genomic Profiling of a Rare Thyroid Follicular Dendritic Cell Sarcoma. Rare Tumors. 9: 6834. PMID 28975018 DOI: 10.4081/Rt.2017.6834 |
0.377 |
|
| 2017 |
DeRycke MS, Gunawardena S, Balcom JR, Pickart AM, Waltman LA, French AJ, McDonnell S, Riska SM, Fogarty ZC, Larson MC, Middha S, Eckloff BW, Asmann YW, Ferber MJ, Haile RW, et al. Targeted sequencing of 36 known or putative colorectal cancer susceptibility genes. Molecular Genetics & Genomic Medicine. 5: 553-569. PMID 28944238 DOI: 10.1002/Mgg3.317 |
0.323 |
|
| 2017 |
Finch NA, Wang X, Baker MC, Heckman MG, Gendron TF, Bieniek KF, Wuu J, DeJesus-Hernandez M, Brown PH, Chew J, Jansen-West KR, Daughrity LM, Nicholson AM, Murray ME, Josephs KA, ... ... Asmann YW, et al. Abnormal expression of homeobox genes and transthyretin in C9ORF72 expansion carriers. Neurology. Genetics. 3: e161. PMID 28660252 DOI: 10.1212/Nxg.0000000000000161 |
0.343 |
|
| 2017 |
N'Songo A, Carrasquillo MM, Wang X, Burgess JD, Nguyen T, Asmann YW, Serie DJ, Younkin SG, Allen M, Pedraza O, Duara R, Greig Custo MT, Graff-Radford NR, Ertekin-Taner N. African American exome sequencing identifies potential risk variants at Alzheimer disease loci. Neurology. Genetics. 3: e141. PMID 28480329 DOI: 10.1212/Nxg.0000000000000141 |
0.335 |
|
| 2017 |
Manso BA, Wenzl K, Asmann YW, Maurer MJ, Manske M, Yang ZZ, Slager SL, Nowakowski GS, Ansell SM, Witzig TE, Feldman AL, Rimsza L, Link B, Cerhan JR, Novak AJ. Whole-exome analysis reveals novel somatic genomic alterations associated with cell of origin in diffuse large B-cell lymphoma. Blood Cancer Journal. 7: e553. PMID 28430174 DOI: 10.1038/Bcj.2017.33 |
0.321 |
|
| 2017 |
Parasramka M, Yan IK, Wang X, Nguyen P, Matsuda A, Maji S, Foye C, Asmann Y, Patel T. BAP1 dependent expression of long non-coding RNA NEAT-1 contributes to sensitivity to gemcitabine in cholangiocarcinoma. Molecular Cancer. 16: 22. PMID 28122578 DOI: 10.1186/S12943-017-0587-X |
0.319 |
|
| 2017 |
N'Songo A, Carrasquillo MM, Wang X, Nguyen T, Asmann Y, Younkin SG, Allen M, Duara R, Custo MT, Graff-Radford N, Ertekin-Taner N. Comprehensive Screening for Disease Risk Variants in Early-Onset Alzheimer's Disease Genes in African Americans Identifies Novel PSEN Variants. Journal of Alzheimer's Disease : Jad. PMID 28106563 DOI: 10.3233/Jad-161185 |
0.343 |
|
| 2017 |
Wenzl K, Manske M, Muse A, Asmann YW, Maurer MJ, Witzig TE, Slager SL, Ansell SM, Cerhan JR, Novak AJ. Beyond MYD88: Implications of TNFAIP3 Loss on MYD88 Driven Lymphomas Blood. 130: 1459-1459. DOI: 10.1182/Blood.V130.Suppl_1.1459.1459 |
0.352 |
|
| 2016 |
Parasramka M, Serie DJ, Asmann YW, Eckel-Passow JE, Castle EP, Stanton ML, Leibovich BC, Thompson RH, Thompson EA, Parker AS, Ho TH, Joseph RW. Validation of Gene Expression Signatures to Identify Low-risk Clear-cell Renal Cell Carcinoma Patients at Higher Risk for Disease-related Death. European Urology Focus. 2: 608-615. PMID 28723492 DOI: 10.1016/J.Euf.2016.03.008 |
0.331 |
|
| 2016 |
Carrasquillo MM, Allen M, Burgess JD, Wang X, Strickland SL, Aryal S, Siuda J, Kachadoorian ML, Medway C, Younkin CS, Nair A, Wang C, Chanana P, Serie D, Nguyen T, ... ... Asmann YW, et al. A candidate regulatory variant at the TREM gene cluster associates with decreased Alzheimer's disease risk and increased TREML1 and TREM2 brain gene expression. Alzheimer's & Dementia : the Journal of the Alzheimer's Association. PMID 27939925 DOI: 10.1016/J.Jalz.2016.10.005 |
0.34 |
|
| 2016 |
Allen M, Carrasquillo MM, Funk C, Heavner BD, Zou F, Younkin CS, Burgess JD, Chai HS, Crook J, Eddy JA, Li H, Logsdon B, Peters MA, Dang KK, Wang X, ... ... Asmann Y, et al. Human whole genome genotype and transcriptome data for Alzheimer's and other neurodegenerative diseases. Scientific Data. 3: 160089. PMID 27727239 DOI: 10.1038/Sdata.2016.89 |
0.359 |
|
| 2016 |
Pottier C, Ravenscroft TA, Brown PH, Finch NA, Baker M, Parsons M, Asmann YW, Ren Y, Christopher E, Levitch D, van Blitterswijk M, Cruchaga C, Campion D, Nicolas G, Richard AC, et al. TYROBP genetic variants in early-onset Alzheimer's disease. Neurobiology of Aging. PMID 27658901 DOI: 10.1016/J.Neurobiolaging.2016.07.028 |
0.354 |
|
| 2016 |
Demchenko Y, Roschke A, Chen WD, Asmann Y, Bergsagel PL, Kuehl WM. Frequent occurrence of large duplications at reciprocal genomic rearrangement breakpoints in multiple myeloma and other tumors. Nucleic Acids Research. PMID 27353332 DOI: 10.1093/Nar/Gkw527 |
0.344 |
|
| 2016 |
Boddicker RL, Razidlo GL, Dasari S, Zeng Y, Hu G, Knudson RA, Greipp PT, Davila JI, Johnson SH, Porcher JC, Smadbeck JB, Eckloff BW, Billadeau DD, Kurtin PJ, McNiven MA, ... ... Asmann YW, et al. Integrated mate-pair and RNA sequencing identifies novel, targetable gene fusions in peripheral T-cell lymphoma. Blood. PMID 27297792 DOI: 10.1182/Blood-2016-03-707141 |
0.37 |
|
| 2016 |
Allen M, Burgess JD, Ballard T, Serie D, Wang X, Younkin CS, Sun Z, Kouri N, Baheti S, Wang C, Carrasquillo MM, Nguyen T, Lincoln S, Malphrus K, Murray M, ... ... Asmann Y, et al. Gene expression, methylation and neuropathology correlations at progressive supranuclear palsy risk loci. Acta Neuropathologica. PMID 27115769 DOI: 10.1007/S00401-016-1576-7 |
0.318 |
|
| 2016 |
Machiela MJ, Lan Q, Slager SL, Vermeulen RC, Teras LR, Camp NJ, Cerhan JR, Spinelli JJ, Wang SS, Nieters A, Vijai J, Yeager M, Wang Z, Ghesquières H, McKay J, ... ... Asmann YW, et al. Genetically predicted longer telomere length is associated with increased risk of B-cell lymphoma subtypes. Human Molecular Genetics. 25: 1663-76. PMID 27008888 DOI: 10.1093/Hmg/Ddw027 |
0.313 |
|
| 2016 |
Misund K, Keane N, Asmann YW, Wier SV, Riggs D, Ahmann G, Chesi M, Körtum KM, Fonseca R, Stewart AK, Braggio E, Bergsagel PL. Complementary Activation of Ccnd, MYC, RAS and NFkB By Mutations in Multiple Myeloma Blood. 128: 355-355. DOI: 10.1182/Blood.V128.22.355.355 |
0.372 |
|
| 2016 |
Wenzl K, Manso B, Asmann YW, Maurer MJ, Manske M, Yang Z, Slager SL, Nowakowski GS, Ansell SM, Witzig TE, Feldman AL, Rimsza L, Link BK, Cerhan JR, Novak AJ. Whole-Exome Analysis Reveals Novel Somatic Genomic Alterations Associated with Cell of Origin in Diffuse Large B-Cell Lymphoma Blood. 128: 2935-2935. DOI: 10.1182/Blood.V128.22.2935.2935 |
0.377 |
|
| 2016 |
Thompson E, Asmann Y, Su X, Ellis M, Shao J, Hu Y, White K, Cherniack A, Hoadley K, Serie D, Perez E, Perou C. Abstract S4-02: A comprehensive analysis of fusion transcripts in breast cancer reveals associations between number of fusion transcripts, copy number events, gene expression profiles, and potentially clinical outcome Cancer Research. 76. DOI: 10.1158/1538-7445.Sabcs15-S4-02 |
0.364 |
|
| 2015 |
Allen M, Kachadoorian M, Carrasquillo MM, Karhade A, Manly L, Burgess JD, Wang C, Serie D, Wang X, Siuda J, Zou F, Chai HS, Younkin C, Crook J, Medway C, ... ... Asmann YW, et al. Late-onset Alzheimer disease risk variants mark brain regulatory loci. Neurology. Genetics. 1: e15. PMID 27066552 DOI: 10.1212/Nxg.0000000000000012 |
0.339 |
|
| 2015 |
Ghesquieres H, Slager SL, Jardin F, Veron AS, Asmann YW, Maurer MJ, Fest T, Habermann TM, Bene MC, Novak AJ, Mareschal S, Haioun C, Lamy T, Ansell SM, Tilly H, et al. Genome-Wide Association Study of Event-Free Survival in Diffuse Large B-Cell Lymphoma Treated With Immunochemotherapy. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. PMID 26460308 DOI: 10.1200/Jco.2014.60.2573 |
0.319 |
|
| 2015 |
Perez EA, Baehner FL, Butler SM, Thompson EA, Dueck AC, Jamshidian F, Cherbavaz D, Yoshizawa C, Shak S, Kaufman PA, Davidson NE, Gralow J, Asmann YW, Ballman KV. The relationship between quantitative human epidermal growth factor receptor 2 gene expression by the 21-gene reverse transcriptase polymerase chain reaction assay and adjuvant trastuzumab benefit in Alliance N9831. Breast Cancer Research : Bcr. 17: 133. PMID 26429296 DOI: 10.1186/S13058-015-0643-7 |
0.329 |
|
| 2015 |
Novak AJ, Asmann YW, Maurer MJ, Wang C, Slager SL, Hodge LS, Manske M, Price-Troska T, Yang ZZ, Zimmermann MT, Nowakowski GS, Ansell SM, Witzig TE, McPhail E, Ketterling R, et al. Whole-exome analysis reveals novel somatic genomic alterations associated with outcome in immunochemotherapy-treated diffuse large B-cell lymphoma. Blood Cancer Journal. 5: e346. PMID 26314988 DOI: 10.1038/Bcj.2015.69 |
0.344 |
|
| 2015 |
Lin WH, Asmann YW, Anastasiadis PZ. Expression of polarity genes in human cancer. Cancer Informatics. 14: 15-28. PMID 25991909 DOI: 10.4137/Cin.S18964 |
0.321 |
|
| 2015 |
Braggio E, Van Wier S, Ojha J, McPhail E, Asmann YW, Egan J, da Silva JA, Schiff D, Lopes MB, Decker PA, Valdez R, Tibes R, Eckloff B, Witzig TE, Stewart AK, et al. Genome-Wide Analysis Uncovers Novel Recurrent Alterations in Primary Central Nervous System Lymphomas. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 21: 3986-94. PMID 25991819 DOI: 10.1158/1078-0432.Ccr-14-2116 |
0.382 |
|
| 2015 |
Jang JS, Lee A, Li J, Liyanage H, Yang Y, Guo L, Asmann YW, Li PW, Erickson-Johnson M, Sakai Y, Sun Z, Jeon HS, Hwang H, Bungum AO, Edell ES, et al. Common Oncogene Mutations and Novel SND1-BRAF Transcript Fusion in Lung Adenocarcinoma from Never Smokers. Scientific Reports. 5: 9755. PMID 25985019 DOI: 10.1038/Srep09755 |
0.304 |
|
| 2015 |
Gupta E, Guthrie KJ, Krishna M, Asmann Y, Parker AS, Joseph RW. Whole exome sequencing of a patient with metastatic hidradenocarcinoma and review of the literature. Rare Tumors. 7: 5719. PMID 25918615 DOI: 10.4081/Rt.2015.5719 |
0.326 |
|
| 2015 |
Chien J, Sicotte H, Fan JB, Humphray S, Cunningham JM, Kalli KR, Oberg AL, Hart SN, Li Y, Davila JI, Baheti S, Wang C, Dietmann S, Atkinson EJ, Asmann YW, et al. TP53 mutations, tetraploidy and homologous recombination repair defects in early stage high-grade serous ovarian cancer. Nucleic Acids Research. PMID 25916844 DOI: 10.1093/Nar/Gkv111 |
0.334 |
|
| 2015 |
Perez EA, Thompson EA, Ballman KV, Anderson SK, Asmann YW, Kalari KR, Eckel-Passow JE, Dueck AC, Tenner KS, Jen J, Fan JB, Geiger XJ, McCullough AE, Chen B, Jenkins RB, et al. Genomic analysis reveals that immune function genes are strongly linked to clinical outcome in the North Central Cancer Treatment Group n9831 Adjuvant Trastuzumab Trial. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 33: 701-8. PMID 25605861 DOI: 10.1200/Jco.2014.57.6298 |
0.319 |
|
| 2015 |
Shreders A, Asmann Y, Wang X, Roy V. Using Whole Exome Sequencing to Identify Genetic Variation and Polymorphisms Associated with Graft Versus Host Disease in Allogeneic Stem Cell Transplant Recipients Blood. 126: 5414-5414. DOI: 10.1182/Blood.V126.23.5414.5414 |
0.321 |
|
| 2015 |
Asmann Y, Sarangi V, Wang C, Maurer MJ, Ansell S, Feldman AL, Nowakowski GS, Habermann TM, Novak AJ, Slager SL, Link BK, Cerhan J. Study of the Subclonal Mutations in Primary Diffuse Large B-Cell Lymphoma Blood. 126: 131-131. DOI: 10.1182/Blood.V126.23.131.131 |
0.354 |
|
| 2015 |
Asmann YW, Wang C, Necela BM, Chen X, Kocher JA, Maurer MJ, Habermann TM, Slager SL, Feldman AL, Novak AJ, Cerhan JR, Perez EA, Thompson EA. Abstract P6-07-03: An exhaustive algorithm for detecting copy number aberrations and large structural variants in whole-genome mate-pair sequencing data Cancer Research. 75. DOI: 10.1158/1538-7445.Sabcs14-P6-07-03 |
0.333 |
|
| 2014 |
Ogaki K, Fujioka S, Heckman MG, Rayaprolu S, Soto-Ortolaza AI, Labbé C, Walton RL, Lorenzo-Betancor O, Wang X, Asmann Y, Rademakers R, Graff-Radford N, Uitti R, Cheshire WP, Wszolek ZK, et al. Analysis of COQ2 gene in multiple system atrophy. Molecular Neurodegeneration. 9: 44. PMID 25373618 DOI: 10.1186/1750-1326-9-44 |
0.362 |
|
| 2014 |
Asmann YW, Maurer MJ, Wang C, Sarangi V, Ansell SM, Feldman AL, Nowakowski GS, Manske M, Price-Troska T, Yang ZZ, Slager SL, Habermann TM, Cerhan JR, Novak AJ. Genetic diversity of newly diagnosed follicular lymphoma. Blood Cancer Journal. 4: e256. PMID 25360902 DOI: 10.1038/Bcj.2014.80 |
0.4 |
|
| 2014 |
Wang C, Davila JI, Baheti S, Bhagwate AV, Wang X, Kocher JP, Slager SL, Feldman AL, Novak AJ, Cerhan JR, Thompson EA, Asmann YW. RVboost: RNA-seq variants prioritization using a boosting method. Bioinformatics (Oxford, England). 30: 3414-6. PMID 25170027 DOI: 10.1093/Bioinformatics/Btu577 |
0.305 |
|
| 2014 |
Wang X, Bledsoe KL, Graham RP, Asmann YW, Viswanatha DS, Lewis JE, Lewis JT, Chou MM, Yaszemski MJ, Jen J, Westendorf JJ, Oliveira AM. Recurrent PAX3-MAML3 fusion in biphenotypic sinonasal sarcoma. Nature Genetics. 46: 666-8. PMID 24859338 DOI: 10.1038/Ng.2989 |
0.304 |
|
| 2014 |
Borad MJ, Champion MD, Egan JB, Liang WS, Fonseca R, Bryce AH, McCullough AE, Barrett MT, Hunt K, Patel MD, Young SW, Collins JM, Silva AC, Condjella RM, Block M, ... ... Asmann Y, et al. Integrated genomic characterization reveals novel, therapeutically relevant drug targets in FGFR and EGFR pathways in sporadic intrahepatic cholangiocarcinoma. Plos Genetics. 10: e1004135. PMID 24550739 DOI: 10.1371/Journal.Pgen.1004135 |
0.366 |
|
| 2014 |
Smallridge RC, Chindris AM, Asmann YW, Casler JD, Serie DJ, Reddi HV, Cradic KW, Rivera M, Grebe SK, Necela BM, Eberhardt NL, Carr JM, McIver B, Copland JA, Aubrey Thompson E. RNA sequencing identifies multiple fusion transcripts, differentially expressed genes, and reduced expression of immune function genes in BRAF (V600E) mutant vs BRAF wild-type papillary thyroid carcinoma. The Journal of Clinical Endocrinology and Metabolism. 99: E338-47. PMID 24297791 DOI: 10.1210/Jc.2013-2792 |
0.357 |
|
| 2014 |
Asmann YW, Wang C, Necela BM, Chen X, Kocher JA, Maurer MJ, Habermann TM, Slager SL, Feldman AL, Dogan A, Novak A, Cerhan JR, Perez EA, Thompson EA. An exhaustive algorithm for detecting copy number aberrations and large structural variants in whole-genome, mate-pair sequencing data. Journal of Clinical Oncology. 32. DOI: 10.1200/Jco.2014.32.15_Suppl.E22171 |
0.336 |
|
| 2014 |
Thompson EA, Necela BM, Carr JM, Kachergus JM, Serie D, Kalari KR, Asmann YW, Perez EA. Identification and targeting of M-phase progression downstream of HER2 in trastuzumab-sensitive and -resistant breast cancer cell lines. Journal of Clinical Oncology. 32: 612-612. DOI: 10.1200/Jco.2014.32.15_Suppl.612 |
0.302 |
|
| 2014 |
Perez EA, Thompson EA, Anderson SK, Asmann YW, Kalari KR, Eckel-Passow J, Dueck AC, Tenner KS, Jen J, Fan J, Geiger X, McCullough AE, Chen B, Zschunke M, Jenkins RB, et al. Association of genomic analysis of immune function genes and clinical outcome in the NCCTG (Alliance) N9831 adjuvant trastuzumab trial. Journal of Clinical Oncology. 32: 509-509. DOI: 10.1200/Jco.2014.32.15_Suppl.509 |
0.32 |
|
| 2014 |
Asmann Y, Maurer MJ, Sarangi V, Ansell SM, Feldman AL, Nowakowski GS, Manske MK, Troska TP, Yang Z, Slager SL, Habermann TM, Cerhan JR, Novak AJ. Genomic Diversity of Newly Diagnosed Follicular Lymphoma: a Pilot Investigation Blood. 124: 1691-1691. DOI: 10.1182/Blood.V124.21.1691.1691 |
0.398 |
|
| 2014 |
Feldman AL, Vasmatzis G, Asmann YW, Johnson SH, Eckloff BW, Middha S, Davila JI, Kurtin PJ, Link BK, Ansell SM, Cerhan JR. Abstract 5585: Integrated DNA/RNA sequencing for discovery and orthogonal validation of expressed fusion genes in peripheral T-cell lymphomas Cancer Research. 74: 5585-5585. DOI: 10.1158/1538-7445.Am2014-5585 |
0.391 |
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| 2014 |
Davila JI, Starr J, Attia S, Wang C, Wang X, Necela B, John C, Menke D, Sarangi V, Oliver G, Joseph R, Copland J, Parker A, Thompson EA, Smallridge R, ... Asmann YW, et al. Abstract 1894: Extensive genomic profiling of a rare extranodal-follicular dendritic cell sarcoma: Implications for future individualized therapy Cancer Research. 74: 1894-1894. DOI: 10.1158/1538-7445.Am2014-1894 |
0.432 |
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| 2014 |
Patrick O'Neill B, Braggio E, O'Neill BP, Van Wier S, Ojha J, McPhail E, Asmann Y, Egan J, Ayres da Silva J, Schiff D, Lopes MB, Valdez R, Tibes R, Eckloff B, Stewart AK, et al. GENOME-WIDE ANALYSIS UNCOVERS RECURRENT ALTERATIONS IN PRIMARY CENTRAL NERVOUS SYSTEM LYMPHOMAS (PCNSL) Neuro-Oncology. 16: iii43-iii43. DOI: 10.1093/Neuonc/Nou209.7 |
0.388 |
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| 2013 |
Norton N, Sun Z, Asmann YW, Serie DJ, Necela BM, Bhagwate A, Jen J, Eckloff BW, Kalari KR, Thompson KJ, Carr JM, Kachergus JM, Geiger XJ, Perez EA, Thompson EA. Gene expression, single nucleotide variant and fusion transcript discovery in archival material from breast tumors. Plos One. 8: e81925. PMID 24278466 DOI: 10.1371/Journal.Pone.0081925 |
0.341 |
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| 2013 |
Kalari KR, Necela BM, Tang X, Thompson KJ, Lau M, Eckel-Passow JE, Kachergus JM, Anderson SK, Sun Z, Baheti S, Carr JM, Baker TR, Barman P, Radisky DC, Joseph RW, ... ... Asmann YW, et al. An integrated model of the transcriptome of HER2-positive breast cancer. Plos One. 8: e79298. PMID 24223926 DOI: 10.1371/Journal.Pone.0079298 |
0.339 |
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| 2013 |
Feldman AL, Vasmatzis G, Asmann YW, Davila J, Middha S, Eckloff BW, Johnson SH, Porcher JC, Ansell SM, Caride A. Novel TRAF1-ALK fusion identified by deep RNA sequencing of anaplastic large cell lymphoma. Genes, Chromosomes & Cancer. 52: 1097-102. PMID 23999969 DOI: 10.1002/Gcc.22104 |
0.355 |
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| 2013 |
Charbonneau B, Wang AH, Maurer MJ, Asmann YW, Zent CS, Link BK, Ansell SM, Weiner GJ, Ozsan N, Feldman AL, Witzig TE, Cunningham JM, Dogan A, Habermann TM, Slager SL, et al. CXCR5 polymorphisms in non-Hodgkin lymphoma risk and prognosis. Cancer Immunology, Immunotherapy : Cii. 62: 1475-84. PMID 23812490 DOI: 10.1007/S00262-013-1452-4 |
0.32 |
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| 2013 |
DeRycke MS, Gunawardena SR, Middha S, Asmann YW, Schaid DJ, McDonnell SK, Riska SM, Eckloff BW, Cunningham JM, Fridley BL, Serie DJ, Bamlet WR, Cicek MS, Jenkins MA, Duggan DJ, et al. Identification of novel variants in colorectal cancer families by high-throughput exome sequencing. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. 22: 1239-51. PMID 23637064 DOI: 10.1158/1055-9965.Epi-12-1226 |
0.341 |
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| 2013 |
Slager SL, Achenbach SJ, Asmann YW, Camp NJ, Rabe KG, Goldin LR, Call TG, Shanafelt TD, Kay NE, Cunningham JM, Wang AH, Weinberg JB, Norman AD, Link BK, Leis JF, et al. Mapping of the IRF8 gene identifies a 3'UTR variant associated with risk of chronic lymphocytic leukemia but not other common non-Hodgkin lymphoma subtypes. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. 22: 461-6. PMID 23307532 DOI: 10.1158/1055-9965.Epi-12-1217 |
0.373 |
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| 2013 |
Wang VW, Laborde RR, Asmann YW, Li Y, Ma J, Eckloff BW, Tombers NM, Olsen SM, Moore EJ, Olsen KD, Smith DI. Search for chromosome rearrangements: new approaches toward discovery of novel translocations in head and neck squamous cell carcinoma. Head & Neck. 35: 831-5. PMID 22807096 DOI: 10.1002/Hed.23037 |
0.316 |
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| 2013 |
Perez EA, Butler SM, Dueck AC, Baehner FL, Jamshidian F, Cherbavaz DB, Thompson EA, Shak S, Kaufman PA, Davidson NE, Gralow J, Asmann YW, Ballman KV. The relationship between quantitative HER2 gene expression by the 21-gene RT-PCR assay and adjuvant trastuzumab (H) benefit in NCCTG (Alliance) N9831. Journal of Clinical Oncology. 31: 520-520. DOI: 10.1200/Jco.2013.31.15_Suppl.520 |
0.312 |
|
| 2013 |
Ghesquieres H, Slager SL, Jardin F, Veron AS, Novak A, Maurer MJ, Fest T, Habermann TM, Bene MC, Haioun C, Lamy T, Ansell SM, Tilly H, Witzig TE, Feldman AL, ... ... Asmann YW, et al. A Genome-Wide Association Study (GWAS) Of Event-Free Survival In Diffuse Large B-Cell Lymphoma (DLBCL) Treated With Rituximab and Anthracycline-Based Chemotherapy: A Lysa and Iowa/Mayo Clinic SPORE Multistage Study Blood. 122: 76-76. DOI: 10.1182/Blood.V122.21.76.76 |
0.317 |
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| 2013 |
Novak AJ, Asmann YW, Maurer MJ, Wang C, Slager SL, Hodge LS, Manske M, Price-troska T, Zimmerman M, Ansell SM, Witzig TE, Feldman AL, Dogan A, Link BK, Habermann TM, et al. Whole-Exome Analysis Of DLBCL Tumors Reveals a Unique Genetic Signature Associated With Aggressive Disease Blood. 122: 499-499. DOI: 10.1182/Blood.V122.21.499.499 |
0.386 |
|
| 2013 |
Asmann YW, Sarangi V, Eckloff BW, Cunningham JM, McDonough SJ, Lee YK, Wieben ED, Dogan A, Feldman AL, Slager SL, Cerhan JR, Novak AJ. Comparison Of Single Nucleotide Mutations (SNVs) and Copy Number Variants (CNVs) Detection In Formalin Fixed Paraffin Embedded (FFPE) and Paired Frozen Tumor Tissues Using Target Capture and Sequencing Approach Blood. 122: 1784-1784. DOI: 10.1182/Blood.V122.21.1784.1784 |
0.336 |
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| 2013 |
Norton N, Perez EA, Asmann YW, Carr JM, Necela BM, Kachergus JM, Jen J, Eckloff BW, Thompson EA. Abstract 2005: Analysis of gene expression and copy number variation in breast tumors using both sequencing and hybridization-based platforms. Cancer Research. 73: 2005-2005. DOI: 10.1158/1538-7445.Am2013-2005 |
0.355 |
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| 2012 |
Cerhan JR, Fredericksen ZS, Novak AJ, Ansell SM, Kay NE, Liebow M, Dogan A, Cunningham JM, Wang AH, Witzig TE, Habermann TM, Asmann YW, Slager SL. A two-stage evaluation of genetic variation in immune and inflammation genes with risk of non-Hodgkin lymphoma identifies new susceptibility locus in 6p21.3 region. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. 21: 1799-806. PMID 22911334 DOI: 10.1158/1055-9965.Epi-12-0696 |
0.337 |
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| 2012 |
Fridley BL, Chalise P, Tsai YY, Sun Z, Vierkant RA, Larson MC, Cunningham JM, Iversen ES, Fenstermacher D, Barnholtz-Sloan J, Asmann Y, Risch HA, Schildkraut JM, Phelan CM, Sutphen R, et al. Germline copy number variation and ovarian cancer survival. Frontiers in Genetics. 3: 142. PMID 22891074 DOI: 10.3389/Fgene.2012.00142 |
0.328 |
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| 2012 |
Vasmatzis G, Johnson SH, Knudson RA, Ketterling RP, Braggio E, Fonseca R, Viswanatha DS, Law ME, Kip NS, Ozsan N, Grebe SK, Frederick LA, Eckloff BW, Thompson EA, Kadin ME, ... ... Asmann YW, et al. Genome-wide analysis reveals recurrent structural abnormalities of TP63 and other p53-related genes in peripheral T-cell lymphomas. Blood. 120: 2280-9. PMID 22855598 DOI: 10.1182/Blood-2012-03-419937 |
0.395 |
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| 2012 |
Heit JA, Armasu SM, Asmann YW, Cunningham JM, Matsumoto ME, Petterson TM, De Andrade M. A genome-wide association study of venous thromboembolism identifies risk variants in chromosomes 1q24.2 and 9q. Journal of Thrombosis and Haemostasis : Jth. 10: 1521-31. PMID 22672568 DOI: 10.1111/J.1538-7836.2012.04810.X |
0.3 |
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| 2012 |
Kalari KR, Rossell D, Necela BM, Asmann YW, Nair A, Baheti S, Kachergus JM, Younkin CS, Baker T, Carr JM, Tang X, Walsh MP, Chai HS, Sun Z, Hart SN, et al. Deep Sequence Analysis of Non-Small Cell Lung Cancer: Integrated Analysis of Gene Expression, Alternative Splicing, and Single Nucleotide Variations in Lung Adenocarcinomas with and without Oncogenic KRAS Mutations. Frontiers in Oncology. 2: 12. PMID 22655260 DOI: 10.3389/Fonc.2012.00012 |
0.377 |
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| 2012 |
Egan JB, Shi CX, Tembe W, Christoforides A, Kurdoglu A, Sinari S, Middha S, Asmann Y, Schmidt J, Braggio E, Keats JJ, Fonseca R, Bergsagel PL, Craig DW, Carpten JD, et al. Whole-genome sequencing of multiple myeloma from diagnosis to plasma cell leukemia reveals genomic initiating events, evolution, and clonal tides. Blood. 120: 1060-6. PMID 22529291 DOI: 10.1182/Blood-2012-01-405977 |
0.361 |
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| 2012 |
Tschumper RC, Asmann YW, Hossain A, Huddleston PM, Wu X, Dispenzieri A, Eckloff BW, Jelinek DF. Comprehensive assessment of potential multiple myeloma immunoglobulin heavy chain V-D-J intraclonal variation using massively parallel pyrosequencing. Oncotarget. 3: 502-13. PMID 22522905 DOI: 10.18632/Oncotarget.469 |
0.347 |
|
| 2012 |
Asmann YW, Necela BM, Kalari KR, Hossain A, Baker TR, Carr JM, Davis C, Getz JE, Hostetter G, Li X, McLaughlin SA, Radisky DC, Schroth GP, Cunliffe HE, Perez EA, et al. Detection of redundant fusion transcripts as biomarkers or disease-specific therapeutic targets in breast cancer. Cancer Research. 72: 1921-8. PMID 22496456 DOI: 10.1158/0008-5472.Can-11-3142 |
0.322 |
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| 2012 |
Lohr JG, Stojanov P, Lawrence MS, Auclair D, Chapuy B, Sougnez C, Cruz-Gordillo P, Knoechel B, Asmann YW, Slager SL, Novak AJ, Dogan A, Ansell SM, Link BK, Zou L, et al. Discovery and prioritization of somatic mutations in diffuse large B-cell lymphoma (DLBCL) by whole-exome sequencing. Proceedings of the National Academy of Sciences of the United States of America. 109: 3879-84. PMID 22343534 DOI: 10.1073/Pnas.1121343109 |
0.34 |
|
| 2012 |
Asmann YW, Middha S, Hossain A, Baheti S, Li Y, Chai HS, Sun Z, Duffy PH, Hadad AA, Nair A, Liu X, Zhang Y, Klee EW, Kalari KR, Kocher JP. TREAT: a bioinformatics tool for variant annotations and visualizations in targeted and exome sequencing data. Bioinformatics (Oxford, England). 28: 277-8. PMID 22088845 DOI: 10.1093/Bioinformatics/Btr612 |
0.32 |
|
| 2012 |
Charbonneau B, Wang AH, Novak AJ, Ansell SM, Feldman AL, Asmann YW, Cunningham JM, Maurer MJ, Dogan A, Habermann TM, Link BK, Slager SL, Cerhan JR. CXCR5 Polymorphisms in Non-Hodgkin Lymphoma (NHL) Risk and Prognosis. Blood. 120: 2702-2702. DOI: 10.1182/Blood.V120.21.2702.2702 |
0.322 |
|
| 2012 |
Kalari KR, Chai H, Asmann YW, Tang X, Rossell D, Baheti S, Nair A, Baker TR, Necela BM, Carr JM, Hart SN, Sun Z, Kachergus JM, Younkin CS, Kocher JA, et al. Abstract 4926: Modeling the transcriptome landscape of HER2+ breast cancer Cancer Research. 72: 4926-4926. DOI: 10.1158/1538-7445.Am2012-4926 |
0.39 |
|
| 2012 |
Wang VW, Laborde RR, Asmann YW, Li Y, Ma J, Eckloff BW, Tombers NM, Olsen SM, Moore EJ, Olsen KD, Smith DI. Abstract 3100: Identifying novel chromosomal fusions out of RNAseq data from oropharyngeal cancers Cancer Research. 72: 3100-3100. DOI: 10.1158/1538-7445.Am2012-3100 |
0.371 |
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| 2012 |
Perez E, Eckel-Passow J, Ballman K, Anderson S, Thompson E, Asmann Y, Jen J, Dueck A, Lingle W, Sledge G, Winer E, Gralow J, Jenkins R, Reinholz M. Abstract PD10-04: Predictive genomic markers to chemotherapy and adjuvant trastuzumab via whole genome expression DASL profiling in the N9831 adjuvant study Cancer Research. 72. DOI: 10.1158/0008-5472.Sabcs12-Pd10-04 |
0.347 |
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| 2011 |
Brisbin AG, Asmann YW, Song H, Tsai YY, Aakre JA, Yang P, Jenkins RB, Pharoah P, Schumacher F, Conti DV, Duggan DJ, Jenkins M, Hopper J, Gallinger S, Newcomb P, et al. Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development. Bmc Medical Genetics. 12: 156. PMID 22142333 DOI: 10.1186/1471-2350-12-156 |
0.332 |
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| 2011 |
Wang X, Asmann YW, Erickson-Johnson MR, Oliveira JL, Zhang H, Moura RD, Lazar AJ, Lev D, Bill K, Lloyd RV, Yaszemski MJ, Maran A, Oliveira AM. High-resolution genomic mapping reveals consistent amplification of the fibroblast growth factor receptor substrate 2 gene in well-differentiated and dedifferentiated liposarcoma. Genes, Chromosomes & Cancer. 50: 849-58. PMID 21793095 DOI: 10.1002/Gcc.20906 |
0.363 |
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| 2011 |
Asmann YW, Hossain A, Necela BM, Middha S, Kalari KR, Sun Z, Chai HS, Williamson DW, Radisky D, Schroth GP, Kocher JP, Perez EA, Thompson EA. A novel bioinformatics pipeline for identification and characterization of fusion transcripts in breast cancer and normal cell lines. Nucleic Acids Research. 39: e100. PMID 21622959 DOI: 10.1093/Nar/Gkr362 |
0.331 |
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| 2011 |
Sun Z, Asmann YW, Kalari KR, Bot B, Eckel-Passow JE, Baker TR, Carr JM, Khrebtukova I, Luo S, Zhang L, Schroth GP, Perez EA, Thompson EA. Integrated analysis of gene expression, CpG island methylation, and gene copy number in breast cancer cells by deep sequencing. Plos One. 6: e17490. PMID 21364760 DOI: 10.1371/Journal.Pone.0017490 |
0.376 |
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| 2011 |
Byrne GW, Du Z, Sun Z, Asmann YW, McGregor CG. Changes in cardiac gene expression after pig-to-primate orthotopic xenotransplantation. Xenotransplantation. 18: 14-27. PMID 21342284 DOI: 10.1111/J.1399-3089.2010.00620.X |
0.336 |
|
| 2011 |
Asmann YW, Andrade Md, Middha S, Matsumoto ME, Armasu SM, Petterson TM, Cunningham JM, Heit JA. Identification of Venous Thromboembolism (VTE)-Associated Novel Variants in the ABO Gene Using Targeted Deep Sequencing Blood. 118: 709-709. DOI: 10.1182/Blood.V118.21.709.709 |
0.336 |
|
| 2011 |
Tschumper RC, Asmann YW, Hossain A, Huddleston PM, Wu X, Dispenzieri A, Eckloff BW, Jelinek DF. Assessment of Multiple Myeloma IGHV Intraclonal Variation by Massively Parallel Pyrosequencing Blood. 118: 1814-1814. DOI: 10.1182/Blood.V118.21.1814.1814 |
0.345 |
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| 2011 |
Heit JA, Armasu SM, Matsumoto ME, Petterson TM, Rider DN, Cunningham JM, Asmann YW, Andrade Md. Association of Gene-Environment Interactions with Venous Thromboembolism (VTE): A Merged/Imputed Genome-Wide Scan/Candidate-Gene Case-Control Study Blood. 118: 1242-1242. DOI: 10.1182/Blood.V118.21.1242.1242 |
0.326 |
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| 2011 |
Thompson EA, Asmann YW, Necela BM, Kalari KR, Williamson DW, Carr JM, Baker TR, Schroth GP, Kocher JA, Perez EA. Abstract LB-276: Fusion transcripts in breast cancer cell lines and tumors Cancer Research. 71. DOI: 10.1158/1538-7445.Am2011-Lb-276 |
0.355 |
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| 2011 |
Kalari KR, Rossell D, Asmann Y, Nair A, Baker T, Carr J, Chai H, Hossain A, Sun Z, Li Y, Middha S, Bot B, Passow JE, Kocher J, Perez E, et al. Abstract 4975: Next generation sequencing reveals a connection between KRAS mutation and the NFkB pathway in lung adenocarcinoma samples Cancer Research. 71: 4975-4975. DOI: 10.1158/1538-7445.Am2011-4975 |
0.37 |
|
| 2011 |
Sun Z, Asmann YW, Kalari KR, Bot B, Eckel-Passow JE, Baker TR, Carr JM, Khrebtukova I, Luo S, Zhang L, Schroth GP, Perez EA, Thompson EA. Abstract 4908: Deep sequence analysis of the relationship between gene expression, CpG island methylation, and gene copy number in breast cancer cells Cancer Research. 71: 4908-4908. DOI: 10.1158/1538-7445.Am2011-4908 |
0.375 |
|
| 2011 |
DeRycke MS, Gunawardena SR, Middha S, McDonnell SK, Eckloff BW, Asmann YW, Schaid DJ, Goode EL, Thibodeau SN. Abstract 2742: Assessment of next generation platforms and use of duplicate runs for whole exome sequencing Cancer Research. 71: 2742-2742. DOI: 10.1158/1538-7445.Am2011-2742 |
0.305 |
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| 2011 |
Thompson E, Asmann Y, Necela B, Andorfer C, Cunliffe H, Hossain A, Getz J, Hostetter G, Schroth G, Perez E. P3-06-02: Identification of Redundant, Tumor Subtype Specific Fusion Transcripts in Primary Breast Tumors. Cancer Research. 71. DOI: 10.1158/0008-5472.Sabcs11-P3-06-02 |
0.334 |
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| 2010 |
Reinholz MM, Eckel-Passow JE, Anderson SK, Asmann YW, Zschunke MA, Oberg AL, McCullough AE, Dueck AC, Chen B, April CS, Wickham-Garcia E, Jenkins RB, Cunningham JM, Jen J, Perez EA, et al. Expression profiling of formalin-fixed paraffin-embedded primary breast tumors using cancer-specific and whole genome gene panels on the DASL® platform. Bmc Medical Genomics. 3: 60. PMID 21172013 DOI: 10.1186/1755-8794-3-60 |
0.348 |
|
| 2010 |
Plager DA, Kahl JC, Asmann YW, Nilson AE, Pallanch JF, Friedman O, Kita H. Gene transcription changes in asthmatic chronic rhinosinusitis with nasal polyps and comparison to those in atopic dermatitis. Plos One. 5: e11450. PMID 20625511 DOI: 10.1371/Journal.Pone.0011450 |
0.361 |
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| 2010 |
Tuch BB, Laborde RR, Xu X, Gu J, Chung CB, Monighetti CK, Stanley SJ, Olsen KD, Kasperbauer JL, Moore EJ, Broomer AJ, Tan R, Brzoska PM, Muller MW, Siddiqui AS, ... Asmann YW, et al. Tumor transcriptome sequencing reveals allelic expression imbalances associated with copy number alterations. Plos One. 5: e9317. PMID 20174472 DOI: 10.1371/Journal.Pone.0009317 |
0.411 |
|
| 2010 |
Cooper LT, Onuma OK, Sagar S, Oberg AL, Mahoney DW, Asmann YW, Liu P. Genomic and proteomic analysis of myocarditis and dilated cardiomyopathy. Heart Failure Clinics. 6: 75-85. PMID 19945063 DOI: 10.1016/J.Hfc.2009.08.012 |
0.303 |
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| 2009 |
Asmann YW, Klee EW, Thompson EA, Perez EA, Middha S, Oberg AL, Therneau TM, Smith DI, Poland GA, Wieben ED, Kocher JP. 3' tag digital gene expression profiling of human brain and universal reference RNA using Illumina Genome Analyzer. Bmc Genomics. 10: 531. PMID 19917133 DOI: 10.1186/1471-2164-10-531 |
0.311 |
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| 2009 |
Erickson-Johnson MR, Seys AR, Roth CW, King AA, Hulshizer RL, Wang X, Asmann YW, Lloyd RV, Jacob EK, Oliveira AM. Carboxypeptidase M: a biomarker for the discrimination of well-differentiated liposarcoma from lipoma. Modern Pathology : An Official Journal of the United States and Canadian Academy of Pathology, Inc. 22: 1541-7. PMID 19820690 DOI: 10.1038/Modpathol.2009.149 |
0.307 |
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| 2009 |
Wang L, Oberg AL, Asmann YW, Sicotte H, McDonnell SK, Riska SM, Liu W, Steer CJ, Subramanian S, Cunningham JM, Cerhan JR, Thibodeau SN. Genome-wide transcriptional profiling reveals microRNA-correlated genes and biological processes in human lymphoblastoid cell lines. Plos One. 4: e5878. PMID 19517021 DOI: 10.1371/Journal.Pone.0005878 |
0.318 |
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| 2009 |
Chai HS, Sicotte H, Bailey KR, Turner ST, Asmann YW, Kocher JP. GLOSSI: a method to assess the association of genetic loci-sets with complex diseases. Bmc Bioinformatics. 10: 102. PMID 19344520 DOI: 10.1186/1471-2105-10-102 |
0.322 |
|
| 2009 |
Starr TK, Allaei R, Silverstein KA, Staggs RA, Sarver AL, Bergemann TL, Gupta M, O'Sullivan MG, Matise I, Dupuy AJ, Collier LS, Powers S, Oberg AL, Asmann YW, Thibodeau SN, et al. A transposon-based genetic screen in mice identifies genes altered in colorectal cancer. Science (New York, N.Y.). 323: 1747-50. PMID 19251594 DOI: 10.1126/Science.1163040 |
0.311 |
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| 2008 |
Rodriguez FJ, Giannini C, Asmann YW, Sharma MK, Perry A, Tibbetts KM, Jenkins RB, Scheithauer BW, Anant S, Jenkins S, Eberhart CG, Sarkaria JN, Gutmann DH. Gene expression profiling of NF-1-associated and sporadic pilocytic astrocytoma identifies aldehyde dehydrogenase 1 family member L1 (ALDH1L1) as an underexpressed candidate biomarker in aggressive subtypes. Journal of Neuropathology and Experimental Neurology. 67: 1194-204. PMID 19018242 DOI: 10.1097/Nen.0B013E31818Fbe1E |
0.317 |
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| 2008 |
Nakagawa T, Kollmeyer TM, Morlan BW, Anderson SK, Bergstralh EJ, Davis BJ, Asmann YW, Klee GG, Ballman KV, Jenkins RB. A tissue biomarker panel predicting systemic progression after PSA recurrence post-definitive prostate cancer therapy. Plos One. 3: e2318. PMID 18846227 DOI: 10.1371/Journal.Pone.0002318 |
0.304 |
|
| 2008 |
Rajagopalan G, Asmann YW, Lytle AK, Tilahun AY, Theuer JE, Smart MK, Patel R, David CS. Cyclooxygenase 2 pathway and its therapeutic inhibition in superantigen-induced toxic shock. Shock (Augusta, Ga.). 30: 721-8. PMID 18496243 DOI: 10.1097/Shk.0B013E31817048F7 |
0.316 |
|
| 2006 |
Wang X, Allen M, Carrasquillo MM, Burgess JD, Li S, Asmann YW, Ertekin-Taner N. P4-049: IDENTIFICATION OF CELL-SPECIFIC DIFFERENTIALLY EXPRESSED GENES IN ALZHEIMER'S DISEASE Alzheimer's & Dementia. 14: P1452-P1452. DOI: 10.1016/J.Jalz.2018.06.2451 |
0.331 |
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