Jerzy W. Jaromczyk - Publications

Affiliations: 
Computer Science University of Kentucky, Lexington, KY 

22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Cook D, Donzelli BG, Creamer R, Baucom DL, Gardner DR, Pan J, Moore N, Jaromczyk JW, Schardl CL. Swainsonine Biosynthesis Genes in Diverse Symbiotic and Pathogenic Fungi. G3 (Bethesda, Md.). PMID 28381497 DOI: 10.1534/G3.117.041384  0.571
2017 Rouchka EC, Chariker JH, Tieri DA, Park JW, Rajurkar S, Singh V, Verma NK, Cui Y, Farman M, Condon B, Moore N, Jaromczyk J, Jaromczyk J, Harris D, Calie P, ... ... Jaromczyk JW, et al. Proceedings of the 16th Annual UT-KBRIN Bioinformatics Summit 2016: bioinformatics Bmc Bioinformatics. 18. DOI: 10.1186/S12859-017-1781-Y  0.478
2016 Rouchka EC, Chariker JH, Harrison BJ, Park JW, Cao X, Pounds S, Raimondi S, Downing J, Ribeiro R, Rubnitz J, Lamba J, Daigle BJ, Burgess D, Gehrlich S, Carmen JC, ... ... Jaromczyk JW, et al. Proceedings of the 15th Annual UT-KBRIN Bioinformatics Summit 2016 Bmc Bioinformatics. 17: 297. PMID 28166713 DOI: 10.1186/S12859-016-1154-Y  0.557
2015 Chui R, Jaromczyk JW, Moore N, Schardl CL. Validation and quality assurance for genome browser database exports Bmc Bioinformatics. 16. DOI: 10.1186/1471-2105-16-S15-P13  0.586
2014 Farman M, Calie P, Jaromczyk J, Moore N, Harris D, Schardl C. An adaptive landscape for training in the essentials of next gen sequencing data acquisition and bioinformatic analysis Bmc Bioinformatics. 15. DOI: 10.1186/1471-2105-15-S10-P25  0.563
2014 Moore N, Jaromczyk JW, Schardl CL, Hill J, Wright D. Automating deployment of several GBrowse instances Bmc Bioinformatics. 15. DOI: 10.1186/1471-2105-15-S10-P2  0.587
2014 Fahrbach M, Jaromczyk JW, David Mobley R, Moore N. Video game bots as a theme for student software competitions Proceedings of Cgames 2014 Usa - 19th International Conference On Computer Games: Ai, Animation, Mobile, Interactive Multimedia, Educational and Serious Games. 134-137. DOI: 10.1109/CGames.2014.6934158  0.427
2014 Schardl CL, Young CA, Moore N, Krom N, Dupont PY, Pan J, Florea S, Webb JS, Jaromczyk J, Jaromczyk JW, Cox MP, Farman ML. Genomes of plant-associated clavicipitaceae Advances in Botanical Research. 70: 291-327. DOI: 10.1016/B978-0-12-397940-7.00010-0  0.539
2013 Schardl CL, Young CA, Hesse U, Amyotte SG, Andreeva K, Calie PJ, Fleetwood DJ, Haws DC, Moore N, Oeser B, Panaccione DG, Schweri KK, Voisey CR, Farman ML, Jaromczyk JW, ... ... Jaromczyk J, et al. Plant-symbiotic fungi as chemical engineers: multi-genome analysis of the clavicipitaceae reveals dynamics of alkaloid loci. Plos Genetics. 9: e1003323. PMID 23468653 DOI: 10.1371/Journal.Pgen.1003323  0.573
2013 Parke T, Farman M, Farnsworth E, Fox D, Jaromczyk JW, Jaromczyk J, Moore N, Schardl CL, Yoshida R, Calie P. Using HPC for teaching and learning bioinformatics software: Benefits and challenges Bmc Bioinformatics. 14. DOI: 10.1186/1471-2105-14-S17-A18  0.57
2013 Chui R, Jaromczyk JW, Moore N, Schardl CL. FPD2GB2: Automating a transition from a customized genome browser to GBrowse2 Bmc Bioinformatics. 14. DOI: 10.1186/1471-2105-14-S17-A17  0.604
2012 Jaromczyk JW, Moore N, Schardl CL. A linear-time algorithm for finding a maximum-length ORF in a splice graph. International Journal of Computational Biology and Drug Design. 5: 284-97. PMID 23013654 DOI: 10.1504/Ijcbdd.2012.049212  0.536
2012 Moore N, Jaromczyk JW, Schardl CL. Finding long protein products of alternatively spliced genes Bmc Bioinformatics. 13: A12. DOI: 10.1186/1471-2105-13-S12-A12  0.52
2011 Moore N, Jaromczyk JW. Finding a longest open reading frame of an alternatively spliced gene 2011 Ieee International Conference On Bioinformatics and Biomedicine Workshops, Bibmw 2011. 215-222. DOI: 10.1109/BIBMW.2011.6112377  0.489
2010 Arnaoudova E, Haws DC, Huggins P, Jaromczyk JW, Moore N, Schardl CL, Yoshida R. Statistical phylogenetic tree analysis using differences of means. Frontiers in Neuroscience. 4. PMID 20802801 DOI: 10.7490/F1000Research.253.1  0.565
2010 Harris D, Jaromczyk JW, Schardl CL. Experimenting with database segmentation size vs time performance for mpiBLAST on an IBM HS21 blade cluster Bmc Bioinformatics. 11. DOI: 10.1186/1471-2105-11-S4-P9  0.396
2010 Arnaoudova E, Jaromczyk JW, Moore N, Schardl CL, Yoshida R. Phylotree – a toolkit for computing experiments with distance-based methods for genome coevolution Bmc Bioinformatics. 11. DOI: 10.1186/1471-2105-11-S4-P6  0.581
2009 Arnaoudova EG, Bowens PJ, Chui RG, Dinkins RD, Hesse U, Jaromczyk JW, Martin M, Maynard P, Moore N, Schardl CL. Visualizing and sharing results in bioinformatics projects: GBrowse and GenBank exports Bmc Bioinformatics. 10: A4. DOI: 10.1186/1471-2105-10-S7-A4  0.593
2007 Guo JT, Jaromczyk JW, Xu Y. Analysis of chameleon sequences and their implications in biological processes. Proteins. 67: 548-58. PMID 17299764 DOI: 10.1002/Prot.21285  0.334
2006 Dekhtyar A, Iacob IE, Jaromczyk JW, Kiernan K, Moore N, Porter DC. Support for XML markup of image-based electronic editions International Journal On Digital Libraries. 6: 55-69. DOI: 10.1007/S00799-005-0123-2  0.515
2005 Dekhtyar A, Iacob IE, Jaromczyk J, Kiernan K, Moore N, Porter DC. Building image-based Electronic Editions using the edition Production Technology Proceedings of the Acm/Ieee Joint Conference On Digital Libraries. 406.  0.452
2004 Jaromczyk JW, Kowaluk M, Moore N. A web interface to image-based concurrent markup using image maps Proceedings of the Interntational Workshop On Web Information and Data Management. 152-159.  0.441
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