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John D. Venable, Ph.D. - Publications

Affiliations: 
2001 University of Texas at Austin, Austin, Texas, U.S.A. 
Area:
Analytical Chemistry
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21 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Xu T, Park SK, Venable JD, Wohlschlegel JA, Diedrich JK, Cociorva D, Lu B, Liao L, Hewel J, Han X, Wong CC, Fonslow B, Delahunty C, Gao Y, Shah H, et al. ProLuCID: An improved SEQUEST-like algorithm with enhanced sensitivity and specificity. Journal of Proteomics. PMID 26171723 DOI: 10.1016/J.Jprot.2015.07.001  0.32
2009 Wong CC, Cociorva D, Venable JD, Xu T, Yates JR. Comparison of different signal thresholds on data dependent sampling in Orbitrap and LTQ mass spectrometry for the identification of peptides and proteins in complex mixtures. Journal of the American Society For Mass Spectrometry. 20: 1405-14. PMID 19467883 DOI: 10.1016/J.Jasms.2009.04.007  0.431
2008 Park SK, Venable JD, Xu T, Yates JR. A quantitative analysis software tool for mass spectrometry-based proteomics. Nature Methods. 5: 319-22. PMID 18345006 DOI: 10.1038/Nmeth.1195  0.394
2008 Lu B, Motoyama A, Ruse C, Venable J, Yates JR. Improving protein identification sensitivity by combining MS and MS/MS information for shotgun proteomics using LTQ-Orbitrap high mass accuracy data. Analytical Chemistry. 80: 2018-25. PMID 18275164 DOI: 10.1021/Ac701697W  0.37
2007 Dong MQ, Venable JD, Au N, Xu T, Park SK, Cociorva D, Johnson JR, Dillin A, Yates JR. Quantitative mass spectrometry identifies insulin signaling targets in C. elegans. Science (New York, N.Y.). 317: 660-3. PMID 17673661 DOI: 10.1126/Science.1139952  0.337
2007 Venable JD, Wohlschlegel J, McClatchy DB, Park SK, Yates JR. Relative quantification of stable isotope labeled peptides using a linear ion trap-Orbitrap hybrid mass spectrometer. Analytical Chemistry. 79: 3056-64. PMID 17367114 DOI: 10.1021/Ac062054I  0.408
2006 Motoyama A, Venable JD, Ruse CI, Yates JR. Automated ultra-high-pressure multidimensional protein identification technology (UHP-MudPIT) for improved peptide identification of proteomic samples. Analytical Chemistry. 78: 5109-18. PMID 16841936 DOI: 10.1021/Ac060354U  0.354
2006 Venable JD, Xu T, Cociorva D, Yates JR. Cross-correlation algorithm for calculation of peptide molecular weight from tandem mass spectra. Analytical Chemistry. 78: 1921-9. PMID 16536429 DOI: 10.1021/Ac051636H  0.375
2006 Cantin GT, Venable JD, Cociorva D, Yates JR. Quantitative phosphoproteomic analysis of the tumor necrosis factor pathway. Journal of Proteome Research. 5: 127-34. PMID 16396503 DOI: 10.1021/Pr050270M  0.324
2006 Cao H, Deterding LJ, Venable JD, Kennington EA, Yates JR, Tomer KB, Blackshear PJ. Identification of the anti-inflammatory protein tristetraprolin as a hyperphosphorylated protein by mass spectrometry and site-directed mutagenesis. The Biochemical Journal. 394: 285-97. PMID 16262601 DOI: 10.1042/Bj20051316  0.307
2005 Zhu W, Venable J, Giometti CS, Khare T, Tollaksen S, Ahrendt AJ, Yates JR. Large-scale muLC-MS/MS for silver- and Coomassie blue-stained polyacrylamide gels. Electrophoresis. 26: 4495-507. PMID 16315175 DOI: 10.1002/Elps.200500093  0.36
2004 Venable JD, Dong MQ, Wohlschlegel J, Dillin A, Yates JR. Automated approach for quantitative analysis of complex peptide mixtures from tandem mass spectra. Nature Methods. 1: 39-45. PMID 15782151 DOI: 10.1038/Nmeth705  0.454
2004 McDonald WH, Tabb DL, Sadygov RG, MacCoss MJ, Venable J, Graumann J, Johnson JR, Cociorva D, Yates JR. MS1, MS2, and SQT-three unified, compact, and easily parsed file formats for the storage of shotgun proteomic spectra and identifications. Rapid Communications in Mass Spectrometry : Rcm. 18: 2162-8. PMID 15317041 DOI: 10.1002/Rcm.1603  0.346
2004 Venable JD, Yates JR. Impact of ion trap tandem mass spectra variability on the identification of peptides. Analytical Chemistry. 76: 2928-37. PMID 15144207 DOI: 10.1021/Ac0348219  0.36
2003 Balsanek WJ, Venable JD, Holcombe JA. Generation of a square wave inductively coupled plasma scanning mass spectrometry signal using electrothermal vaporization sample introduction Journal of Analytical Atomic Spectrometry. 18: 59-64. DOI: 10.1039/B206143K  0.487
2002 Venable JD, Langer D, Holcombe JA. Optimizing the multielement analysis capabilities of an ICP quadrupole mass spectrometer using electrothermal vaporization sample introduction. Analytical Chemistry. 74: 3744-53. PMID 12175162 DOI: 10.1021/Ac0110303  0.699
2001 Venable JD, Detwiler M, Holcombe JA. Multiplexed electrothermal vaporization sample introduction system for inductively coupled plasma spectrometry Spectrochimica Acta - Part B Atomic Spectroscopy. 56: 1697-1706. DOI: 10.1016/S0584-8547(01)00279-8  0.606
2001 Venable J, Holcombe JA. Peak broadening from an electrothermal vaporization sample introduction source into an inductively coupled plasma Spectrochimica Acta Part B: Atomic Spectroscopy. 56: 1431-1440. DOI: 10.1016/S0584-8547(01)00264-6  0.63
2000 Venable J, Williamson T, Holcombe JA. Characterization of pressure pulse and carrier gas flow changes resulting from pulsed heating in ETV-ICP-MS Journal of Analytical Atomic Spectrometry. 15: 1329-1334. DOI: 10.1039/B002205P  0.567
2000 Venable JD, Holcombe JA. Signal enhancements produced from externally generated ‘carrier’ particles in electrothermal vaporization-inductively coupled plasma mass spectrometry Spectrochimica Acta Part B: Atomic Spectroscopy. 55: 753-766. DOI: 10.1016/S0584-8547(00)00205-6  0.633
2000 Venable JD, Holcombe JA. Signal enhancements produced from externally generated 'carrier' particles in electrothermal vaporization-inductively coupled plasma mass spectrometry Spectrochimica Acta, Part B: Atomic Spectroscopy. 55: 753-766.  0.358
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