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Stephen Baccus - Publications

Affiliations: 
Stanford University, Palo Alto, CA 
Area:
Retina
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39 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Ding X, Lee D, Melander JB, Ganguli S, Baccus SA. Adaptation of retinal discriminability to natural scenes. Biorxiv : the Preprint Server For Biology. PMID 39386466 DOI: 10.1101/2024.09.26.615305  0.803
2024 Lee D, Kim J, Baccus SA. Classification and analysis of retinal interneurons by computational structure under natural scenes. Biorxiv : the Preprint Server For Biology. PMID 38562848 DOI: 10.1101/2024.03.18.585364  0.721
2023 Maheswaranathan N, McIntosh LT, Tanaka H, Grant S, Kastner DB, Melander JB, Nayebi A, Brezovec LE, Wang JH, Ganguli S, Baccus SA. Interpreting the retinal neural code for natural scenes: From computations to neurons. Neuron. PMID 37451264 DOI: 10.1016/j.neuron.2023.06.007  0.816
2023 Ding X, Lee D, Melander JB, Sivulka G, Ganguli S, Baccus SA. Information Geometry of the Retinal Representation Manifold. Biorxiv : the Preprint Server For Biology. PMID 37292703 DOI: 10.1101/2023.05.17.541206  0.809
2022 Ding X, Lee D, Grant S, Stein H, McIntosh L, Maheswaranathan N, Baccus S. A mechanistically interpretable model of the retinal neural code for natural scenes with multiscale adaptive dynamics. Conference Record. Asilomar Conference On Signals, Systems & Computers. 2021: 287-291. PMID 38013729 DOI: 10.1109/ieeeconf53345.2021.9723187  0.826
2022 Tanaka H, Nayebi A, Maheswaranathan N, McIntosh L, Baccus SA, Ganguli S. From deep learning to mechanistic understanding in neuroscience: the structure of retinal prediction. Advances in Neural Information Processing Systems. 32: 8537-8547. PMID 35283616  0.757
2022 Manu M, McIntosh LT, Kastner DB, Naecker BN, Baccus SA. Synchronous inhibitory pathways create both efficiency and diversity in the retina. Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 35064086 DOI: 10.1073/pnas.2116589119  0.826
2021 Hsu WM, Kastner DB, Baccus SA, Sharpee TO. How inhibitory neurons increase information transmission under threshold modulation. Cell Reports. 35: 109158. PMID 34038717 DOI: 10.1016/j.celrep.2021.109158  0.725
2019 Kastner DB, Ozuysal Y, Panagiotakos G, Baccus SA. Adaptation of Inhibition Mediates Retinal Sensitization. Current Biology : Cb. PMID 31378605 DOI: 10.1016/J.Cub.2019.06.081  0.785
2018 Zhang Y, Kastner DB, Baccus SA, Sharpee TO. Optimal Information Transmission by Overlapping Retinal Cell Mosaics. Proceedings of the ... Conference On Information Sciences and Systems. Conference On Information Sciences and Systems. 2018. PMID 34746939 DOI: 10.1109/ciss.2018.8362310  0.774
2018 Ozuysal Y, Kastner DB, Baccus SA. Adaptive feature detection from differential processing in parallel retinal pathways. Plos Computational Biology. 14: e1006560. PMID 30457994 DOI: 10.1371/Journal.Pcbi.1006560  0.763
2018 Maheswaranathan N, Kastner DB, Baccus SA, Ganguli S. Inferring hidden structure in multilayered neural circuits. Plos Computational Biology. 14: e1006291. PMID 30138312 DOI: 10.1371/Journal.Pcbi.1006291  0.815
2017 Naecker B, Maheswaranathan N, Ganguli S, Baccus S. Pyret: A Python package for analysis of neurophysiology data The Journal of Open Source Software. 2: 137. DOI: 10.21105/Joss.00137  0.72
2016 McIntosh LT, Maheswaranathan N, Nayebi A, Ganguli S, Baccus SA. Deep Learning Models of the Retinal Response to Natural Scenes. Advances in Neural Information Processing Systems. 29: 1369-1377. PMID 28729779  0.782
2015 Jadzinsky PD, Baccus SA. Synchronized amplification of local information transmission by peripheral retinal input. Elife. 4. PMID 26568312 DOI: 10.7554/Elife.09266  0.372
2015 Kastner DB, Baccus SA, Sharpee TO. Critical and maximally informative encoding between neural populations in the retina. Proceedings of the National Academy of Sciences of the United States of America. 112: 2533-8. PMID 25675497 DOI: 10.1073/Pnas.1418092112  0.752
2014 Kastner DB, Baccus SA. Insights from the retina into the diverse and general computations of adaptation, detection, and prediction. Current Opinion in Neurobiology. 25: 63-9. PMID 24709602 DOI: 10.1016/J.Conb.2013.11.012  0.777
2013 Kastner DB, Baccus SA. Spatial segregation of adaptation and predictive sensitization in retinal ganglion cells. Neuron. 79: 541-54. PMID 23932000 DOI: 10.1016/J.Neuron.2013.06.011  0.767
2013 Jadzinsky PD, Baccus SA. Transformation of visual signals by inhibitory interneurons in retinal circuits. Annual Review of Neuroscience. 36: 403-28. PMID 23724996 DOI: 10.1146/Annurev-Neuro-062012-170315  0.389
2013 Menz MD, Oralkan O, Khuri-Yakub PT, Baccus SA. Precise neural stimulation in the retina using focused ultrasound. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 4550-60. PMID 23467371 DOI: 10.1523/Jneurosci.3521-12.2013  0.378
2012 Ozuysal Y, Baccus SA. Linking the computational structure of variance adaptation to biophysical mechanisms. Neuron. 73: 1002-15. PMID 22405209 DOI: 10.1016/j.neuron.2011.12.029  0.372
2011 Manu M, Baccus SA. Disinhibitory gating of retinal output by transmission from an amacrine cell. Proceedings of the National Academy of Sciences of the United States of America. 108: 18447-52. PMID 22031693 DOI: 10.1073/Pnas.1107994108  0.725
2011 Kastner DB, Baccus SA. Coordinated dynamic encoding in the retina using opposing forms of plasticity. Nature Neuroscience. 14: 1317-22. PMID 21909086 DOI: 10.1038/Nn.2906  0.758
2011 de Vries SE, Baccus SA, Meister M. The projective field of a retinal amacrine cell. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 8595-604. PMID 21653863 DOI: 10.1523/JNEUROSCI.5662-10.2011  0.654
2008 Huberman AD, Manu M, Koch SM, Susman MW, Lutz AB, Ullian EM, Baccus SA, Barres BA. Architecture and activity-mediated refinement of axonal projections from a mosaic of genetically identified retinal ganglion cells. Neuron. 59: 425-38. PMID 18701068 DOI: 10.1016/J.Neuron.2008.07.018  0.668
2008 Baccus SA, Olveczky BP, Manu M, Meister M. A retinal circuit that computes object motion. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 28: 6807-17. PMID 18596156 DOI: 10.1523/Jneurosci.4206-07.2008  0.816
2007 Olveczky BP, Baccus SA, Meister M. Retinal adaptation to object motion. Neuron. 56: 689-700. PMID 18031685 DOI: 10.1016/j.neuron.2007.09.030  0.767
2007 Asher A, Segal WA, Baccus SA, Yaroslavsky LP, Palanker DV. Image processing for a high-resolution optoelectronic retinal prosthesis. Ieee Transactions On Bio-Medical Engineering. 54: 993-1004. PMID 17554819 DOI: 10.1109/TBME.2007.894828  0.31
2007 Baccus SA. Timing and computation in inner retinal circuitry. Annual Review of Physiology. 69: 271-90. PMID 17059359 DOI: 10.1146/annurev.physiol.69.120205.124451  0.402
2006 Baccus SA. From a whisper to a roar: adaptation to the mean and variance of naturalistic sounds. Neuron. 51: 682-4. PMID 16982414 DOI: 10.1016/j.neuron.2006.09.007  0.322
2005 Hosoya T, Baccus SA, Meister M. Dynamic predictive coding by the retina. Nature. 436: 71-7. PMID 16001064 DOI: 10.1038/nature03689  0.771
2005 Palanker D, Vankov A, Huie P, Baccus S. Design of a high-resolution optoelectronic retinal prosthesis. Journal of Neural Engineering. 2: S105-20. PMID 15876646 DOI: 10.1088/1741-2560/2/1/012  0.41
2005 Hosoya T, Baccus S, Meister M. 1SD56 Dynamic Predictive Coding by the Retina Seibutsu Butsuri. 45: S15. DOI: 10.2142/biophys.45.S15_2  0.737
2005 Palanker D, Huie P, Vankov A, Asher A, Baccus S. Towards high-resolution optoelectronic retinal prosthesis Progress in Biomedical Optics and Imaging - Proceedings of Spie. 5688: 223-233. DOI: 10.1117/12.590964  0.301
2004 Baccus SA, Meister M. Retina versus cortex; contrast adaptation in parallel visual pathways. Neuron. 42: 5-7. PMID 15066260 DOI: 10.1016/S0896-6273(04)00187-4  0.509
2003 Olveczky BP, Baccus SA, Meister M. Segregation of object and background motion in the retina. Nature. 423: 401-8. PMID 12754524 DOI: 10.1038/nature01652  0.744
2002 Baccus SA, Meister M. Fast and slow contrast adaptation in retinal circuitry. Neuron. 36: 909-19. PMID 12467594 DOI: 10.1016/S0896-6273(02)01050-4  0.594
2001 Baccus SA, Sahley CL, Muller KJ. Multiple sites of action potential initiation increase neuronal firing rate. Journal of Neurophysiology. 86: 1226-36. PMID 11535672 DOI: 10.1152/Jn.2001.86.3.1226  0.632
2000 Baccus SA, Burrell BD, Sahley CL, Muller KJ. Action potential reflection and failure at axon branch points cause stepwise changes in EPSPs in a neuron essential for learning. Journal of Neurophysiology. 83: 1693-700. PMID 10712489 DOI: 10.1152/Jn.2000.83.3.1693  0.743
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