| Year |
Citation |
Score |
| 2020 |
Giardina SF, Werner DS, Pingle M, Feinberg PB, Foreman KW, Bergstrom DE, Arnold LD, Barany F. Novel, Self-Assembling Dimeric Inhibitors of Human β Tryptase. Journal of Medicinal Chemistry. PMID 32057241 DOI: 10.1021/acs.jmedchem.9b01689 |
0.697 |
|
| 2018 |
Giardina SF, Werner DS, Pingle M, Bergstrom DE, Arnold LD, Barany F. A Novel, Nonpeptidic, Orally Active Bivalent Inhibitor of Human β-Tryptase. Pharmacology. 102: 233-243. PMID 30134249 DOI: 10.1159/000492078 |
0.695 |
|
| 2018 |
Giardina SF, Werner DS, Pingle M, Foreman KW, Bergstrom DE, Arnold LD, Barany F. Target-Directed Self-Assembly of Homodimeric Drugs Against β-Tryptase. Acs Medicinal Chemistry Letters. 9: 827-831. PMID 30128075 DOI: 10.1021/Acsmedchemlett.8B00204 |
0.708 |
|
| 2015 |
Wanner J, Romashko D, Werner DS, May EW, Peng Y, Schulz R, Foreman KW, Russo S, Arnold LD, Pingle M, Bergstrom DE, Barany F, Thomson S. Reversible linkage of two distinct small molecule inhibitors of Myc generates a dimeric inhibitor with improved potency that is active in myc over-expressing cancer cell lines. Plos One. 10: e0121793. PMID 25875098 DOI: 10.1371/Journal.Pone.0121793 |
0.714 |
|
| 2015 |
Wanner J, Romashko D, Werner DS, May EW, Peng Y, Schulz R, Foreman KW, Russo S, Arnold LD, Pingle M, Bergstrom DE, Barany F, Thomson S. Abstract B43: Reversible linkage of two distinct small molecule inhibitors of MYC generates a more potent and selective dimeric inhibitor that is active in cancer cell lines over-expressing MYC Molecular Cancer Research. 13. DOI: 10.1158/1557-3125.Myc15-B43 |
0.337 |
|
| 2013 |
Zohrabi-Kalantari V, Jarrahian A, Bissantz C, Bergstrom DE, Barker EL, Link A. 4-Aminocyclopentane-1,3-diols as platforms for diversity: synthesis of anandamide analogs. Medicinal Chemistry (ShāRiqah (United Arab Emirates)). 9: 881-8. PMID 23157226 DOI: 10.2174/1573406411309060013 |
0.324 |
|
| 2013 |
Dolash BD, Lahiji RR, Zemlyanov DY, Drachev VP, Reifenberger R, Bergstrom DE. Sonication mediated covalent cross-linking of DNA to single-walled carbon nanotubes Chemical Physics. 413: 11-19. DOI: 10.1016/J.Chemphys.2012.07.004 |
0.375 |
|
| 2012 |
Guan Y, Bissantz C, Bergstrom DE, Link A. 1,2,4-trisubstituted cyclopentanes as platforms for diversity. Archiv Der Pharmazie. 345: 677-86. PMID 22760821 DOI: 10.1002/Ardp.201200101 |
0.314 |
|
| 2012 |
Laing BM, Bergstrom DE. Evaluation of end-capped DNA modules for pRNA capture and functionalization. Bioconjugate Chemistry. 23: 683-7. PMID 22443238 DOI: 10.1021/Bc200371T |
0.78 |
|
| 2011 |
Laing BM, Guo P, Bergstrom DE. Optimized method for the synthesis and purification of adenosine--folic acid conjugates for use as transcription initiators in the preparation of modified RNA. Methods (San Diego, Calif.). 54: 260-6. PMID 21163352 DOI: 10.1016/J.Ymeth.2010.12.007 |
0.744 |
|
| 2010 |
Ng PS, Laing BM, Balasundarum G, Pingle M, Friedman A, Bergstrom DE. Synthesis and evaluation of new spacers for use as dsDNA end-caps. Bioconjugate Chemistry. 21: 1545-53. PMID 20715857 DOI: 10.1021/Bc100202Y |
0.8 |
|
| 2010 |
Laing BM, Barrow-Laing L, Harrington M, Long EC, Bergstrom DE. Properties of double-stranded oligonucleotides modified with lipophilic substituents. Bioconjugate Chemistry. 21: 1537-44. PMID 20672836 DOI: 10.1021/Bc100201N |
0.756 |
|
| 2009 |
Bergstrom DE. Unnatural nucleosides with unusual base pairing properties. Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. Unit 1.4. PMID 19488968 DOI: 10.1002/0471142700.Nc0104S37 |
0.328 |
|
| 2008 |
Fang S, Guan Y, Blatchley ER, Shen C, Bergstrom DE. Conjugation of (E)-5-[2-(Methoxycarbonyl)ethenyl]cytidine to hydrophilic microspheres: development of a mobile microscale UV light actinometer. Bioconjugate Chemistry. 19: 592-7. PMID 18266312 DOI: 10.1021/Bc700336X |
0.618 |
|
| 2008 |
Haglund EM, Seale-Goldsmith MM, Dhawan D, Stewart J, Ramos-Vara J, Cooper CL, Reece LM, Husk T, Bergstrom D, Knapp D, Leary JF. Peptide targeting of quantum dots to human breast cancer cells Progress in Biomedical Optics and Imaging - Proceedings of Spie. 6866. DOI: 10.1117/12.764107 |
0.711 |
|
| 2008 |
Lahiji RR, Dolash BD, McDonald J, Zemlyanov D, Bergstrom DE, Reifenberger R. Electrodeposition study of ODN:SWCNT hybrids on gold substrates Physica Status Solidi (a) Applications and Materials Science. 205: 1408-1411. DOI: 10.1002/Pssa.200778153 |
0.303 |
|
| 2008 |
Butler FN, Elibol O, Hines BD, Reddy B, Bashir R, Bergstrom DE. Development of peptide nucleic acid assemblies for application in drug delivery and molecular sensing Technical Proceedings of the 2008 Nsti Nanotechnology Conference and Trade Show, Nsti-Nanotech, Nanotechnology 2008. 2: 369-371. |
0.716 |
|
| 2006 |
Blatchley ER, Shen C, Naunovic Z, Lin LS, Lyn DA, Robinson JP, Ragheb K, Grégori G, Bergstrom DE, Fang S, Guan Y, Jennings K, Gunaratna N. Dyed microspheres for quantification of UV dose distributions: Photochemical reactor characterization by Lagrangian Actinometry Journal of Environmental Engineering. 132: 1390-1403. DOI: 10.1061/(Asce)0733-9372(2006)132:11(1390) |
0.611 |
|
| 2005 |
Adelfinskaya O, Wu W, Davisson VJ, Davisson VJ, Bergstrom DE. Synthesis and structural analysis of oxadiazole carboxamide deoxyribonucleoside analogs. Nucleosides, Nucleotides & Nucleic Acids. 24: 1919-45. PMID 16438058 DOI: 10.1080/15257770500269267 |
0.761 |
|
| 2005 |
Adelfinskaya O, Nashine VC, Bergstrom DE, Davisson VJ. Efficient primer strand extension beyond oxadiazole carboxamide nucleobases. Journal of the American Chemical Society. 127: 16000-1. PMID 16287267 DOI: 10.1021/Ja054226J |
0.767 |
|
| 2005 |
Shen C, Fang S, Bergstrom DE, Blatchley ER. (E)-5-[2-(methoxycarbonyl)ethenyl]cytidine as a chemical actinometer for germicidal UV radiation. Environmental Science & Technology. 39: 3826-32. PMID 15952392 DOI: 10.1021/Es049120N |
0.611 |
|
| 2005 |
Ng PS, Bergstrom DE. Alternative nucleic acid analogues for programmable assembly: hybridization of LNA to PNA. Nano Letters. 5: 107-11. PMID 15792422 DOI: 10.1021/Nl048246F |
0.656 |
|
| 2005 |
Iqbal SM, Balasundaram G, Ghosh S, Bergstrom DE, Bashir R. Direct current electrical characterization of ds-DNA in nanogap junctions Applied Physics Letters. 86: 1-3. DOI: 10.1063/1.1900315 |
0.416 |
|
| 2004 |
Wu W, Bergstrom DE, Jo Davisson V. Chemoenzymatic preparation of nucleoside triphosphates. Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. Unit 13.2. PMID 18428922 DOI: 10.1002/0471142700.Nc1302S16 |
0.357 |
|
| 2004 |
Ng PS, Bergstrom DE. Protein-DNA footprinting by endcapped duplex oligodeoxyribonucleotides. Nucleic Acids Research. 32: e107. PMID 15263063 DOI: 10.1093/Nar/Gnh103 |
0.66 |
|
| 2004 |
Bergstrom DE. Orthogonal base pairs continue to evolve. Chemistry & Biology. 11: 18-20. PMID 15112991 DOI: 10.1016/J.Chembiol.2004.01.007 |
0.38 |
|
| 2004 |
Fang S, Bergstrom DE. Synthesis of a cryptand with tetrahedral connectivity using multiple ring-closing olefin metathesis Tetrahedron Letters. 45: 8501-8504. DOI: 10.1016/J.Tetlet.2004.09.090 |
0.625 |
|
| 2004 |
Fang S, Bergstrom DE. Reversible 5′-end biotinylation and affinity purification of synthetic RNA Tetrahedron Letters. 45: 7987-7990. DOI: 10.1016/J.Tetlet.2004.09.019 |
0.636 |
|
| 2004 |
Bergstrom DE. Nucleic Acid‐Based Microarrays and Nanostructures Current Protocols in Human Genetics. 18. DOI: 10.1002/0471142700.Nc1200S18 |
0.32 |
|
| 2003 |
Pingle MR, Ng PS, Xu X, Bergstrom DE. Synthesis of endcap dimethoxytrityl phosphoramidites for endcapped oligonucleotides. Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. Unit 5.6. PMID 18428911 DOI: 10.1002/0471142700.Nc0506S12 |
0.804 |
|
| 2003 |
Fang S, Bergstrom DE. Reversible biotinylation of the 5'-terminus of oligodeoxyribonucleotides and its application in affinity purification. Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. Unit 4.20. PMID 18428910 DOI: 10.1002/0471142700.Nc0420S14 |
0.713 |
|
| 2003 |
Ng PS, Pingle MR, Balasundarum G, Friedman A, Zu X, Bergstrom DE. Endcaps for stabilizing short DNA duplexes. Nucleosides, Nucleotides & Nucleic Acids. 22: 1635-7. PMID 14565484 DOI: 10.1081/Ncn-120023088 |
0.801 |
|
| 2003 |
Fang S, Guan Y, Blatchley ER, Lin LS, Shen CY, Bergstrom DE. Development of a nucleoside analog UV light sensor. Nucleosides, Nucleotides & Nucleic Acids. 22: 703-5. PMID 14565258 DOI: 10.1081/Ncn-120022614 |
0.606 |
|
| 2003 |
Paul N, Nashine VC, Hoops G, Zhang P, Zhou J, Bergstrom DE, Davisson VJ. DNA polymerase template interactions probed by degenerate isosteric nucleobase analogs. Chemistry & Biology. 10: 815-25. PMID 14522052 DOI: 10.1016/J.Chembiol.2003.08.008 |
0.804 |
|
| 2003 |
Wu W, Bergstrom DE, Davisson VJ. A combination chemical and enzymatic approach for the preparation of azole carboxamide nucleoside triphosphate. The Journal of Organic Chemistry. 68: 3860-5. PMID 12737564 DOI: 10.1021/Jo020745I |
0.346 |
|
| 2003 |
Fang S, Bergstrom DE. Fluoride-cleavable biotinylation phosphoramidite for 5'-end-labeling and affinity purification of synthetic oligonucleotides. Nucleic Acids Research. 31: 708-15. PMID 12527780 DOI: 10.1093/Nar/Gkg130 |
0.711 |
|
| 2003 |
Fang S, Bergstrom DE. Reversible biotinylation phosphoramidite for 5'-end-labeling, phosphorylation, and affinity purification of synthetic oligonucleotides. Bioconjugate Chemistry. 14: 80-5. PMID 12526696 DOI: 10.1021/Bc025626O |
0.708 |
|
| 2003 |
McNally H, Pingle M, Lee SW, Guo D, Bergstrom DE, Bashir R. Self-assembly of micro- and nano-scale particles using bio-inspired events Applied Surface Science. 214: 109-119. DOI: 10.1016/S0169-4332(03)00266-6 |
0.727 |
|
| 2002 |
Guo D, McNally H, Pingle M, Bergstrom D, Bashir R. A Protein Patterning Technique And Its Application In Bio-Inspired Self-Assembly Mrs Proceedings. 761. DOI: 10.1557/Proc-761-Nn2.4 |
0.731 |
|
| 2002 |
McNally H, Lee SW, Guo D, Pingle M, Bergstrom D, Bashir R. Bio-inspired Self-Assembly of Micro and Nano-Structures for Sensing and Electronic Applications Mrs Proceedings. 739. DOI: 10.1557/Proc-739-H9.7 |
0.74 |
|
| 2002 |
Lee SW, McNally HA, Guo D, Pingle M, Bergstrom DE, Bashir R. Electric-field-mediated assembly of silicon islands coated with charged molecules Langmuir. 18: 3383-3386. DOI: 10.1021/La0156558 |
0.706 |
|
| 2001 |
Bergstrom DE. Unnatural nucleosides with unusual base pairing properties. Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. Unit 1.4. PMID 18428819 DOI: 10.1002/0471142700.Nc0104S05 |
0.344 |
|
| 2001 |
Ahmadian M, Klewer DA, Bergstrom DE. Palladium-mediated C5 substitution of pyrimidine nucleosides. Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. Unit 1.1. PMID 18428816 DOI: 10.1002/0471142700.Nc0101S00 |
0.359 |
|
| 2001 |
Bergstrom DE. Characteristics of nucleic acids. Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. Appendix 1B. PMID 18428806 DOI: 10.1002/0471142700.Nca01Bs00 |
0.408 |
|
| 2001 |
Zhang BP, Egholm M, Paul N, Pingle M, Bergstrom DE. Peptide nucleic acid-DNA duplexes containing the universal base 3-nitropyrrole. Methods (San Diego, Calif.). 23: 132-40. PMID 11181032 DOI: 10.1006/Meth.2000.1114 |
0.799 |
|
| 2001 |
McNally H, Pingle M, Lee SW, Guo D, Bergstrom D, Bashir R. Towards the Use of Biologically Inspired Techniques for the Assembly of Electronic Devices Mrs Proceedings. 705. DOI: 10.1557/Proc-705-Y6.5 |
0.759 |
|
| 2000 |
Klewer DA, Hoskins A, Zhang P, Davisson VJ, Bergstrom DE, LiWang AC. NMR structure of a DNA duplex containing nucleoside analog 1-(2'-deoxy-beta-D-ribofuranosyl)-3-nitropyrrole and the structure of the unmodified control. Nucleic Acids Research. 28: 4514-22. PMID 11071940 DOI: 10.1093/Nar/28.22.4514 |
0.35 |
|
| 2000 |
Bashir R, Lee S, Guo D, Pingle M, Bergstrom D, Mcnally HA, Janes D. Basic: Bio-Inspired Assembly of Semiconductor Integrated Circuits Mrs Proceedings. 636. DOI: 10.1557/Proc-636-D11.7.1 |
0.72 |
|
| 1999 |
Zirvi M, Bergstrom DE, Saurage AS, Hammer RP, Barany F. Improved fidelity of thermostable ligases for detection of microsatellite repeat sequences using nucleoside analogs. Nucleic Acids Research. 27: e41. PMID 10572193 DOI: 10.1093/Nar/27.24.E41 |
0.313 |
|
| 1999 |
Day JP, Hammer RP, Bergstrom D, Barany F. Nucleotide analogs and new buffers improve a generalized method to enrich for low abundance mutations. Nucleic Acids Research. 27: 1819-27. PMID 10101189 DOI: 10.1093/Nar/27.8.1819 |
0.305 |
|
| 1999 |
Day JP, Bergstrom D, Hammer RP, Barany F. Nucleotide analogs facilitate base conversion with 3' mismatch primers. Nucleic Acids Research. 27: 1810-8. PMID 10101188 DOI: 10.1093/Nar/27.8.1810 |
0.331 |
|
| 1999 |
Orson FM, Klysik J, Bergstrom DE, Ward B, Glass GA, Hua P, Kinsey BM. Triple helix formation: binding avidity of acridine-conjugated AG motif third strands containing natural, modified and surrogate bases opposed to pyrimidine interruptions in a polypurine target. Nucleic Acids Research. 27: 810-6. PMID 9889277 DOI: 10.1093/Nar/27.3.810 |
0.335 |
|
| 1998 |
Bergstrom DE, Zhang P, Paul N. dsDNA stability dependence on pH and salt concentration. Biotechniques. 24: 992-4. PMID 9631190 |
0.458 |
|
| 1998 |
Zhang P, Johnson WT, Klewer D, Paul N, Hoops G, Davisson VJ, Bergstrom DE. Exploratory studies on azole carboxamides as nucleobase analogs: thermal denaturation studies on oligodeoxyribonucleotide duplexes containing pyrrole-3-carboxamide. Nucleic Acids Research. 26: 2208-15. PMID 9547282 DOI: 10.1093/Nar/26.9.2208 |
0.589 |
|
| 1997 |
Hoops GC, Zhang P, Johnson WT, Paul N, Bergstrom DE, Davisson VJ. Template directed incorporation of nucleotide mixtures using azole-nucleobase analogs. Nucleic Acids Research. 25: 4866-71. PMID 9396789 DOI: 10.1093/Nar/25.24.4866 |
0.657 |
|
| 1997 |
Bergstrom DE, Zhang P, Johnson WT. Comparison of the base pairing properties of a series of nitroazole nucleobase analogs in the oligodeoxyribonucleotide sequence 5'-d(CGCXAATTYGCG)-3'. Nucleic Acids Research. 25: 1935-42. PMID 9115360 DOI: 10.1093/Nar/25.10.1935 |
0.324 |
|
| 1997 |
Johnson WT, Zhang P, Bergstrom DE. The synthesis and stability of oligodeoxyribonucleotides containing the deoxyadenosine mimic 1-(2'-deoxy-beta-D-ribofuranosyl)imidazole-4-carboxamide. Nucleic Acids Research. 25: 559-67. PMID 9016596 DOI: 10.1093/Nar/25.3.559 |
0.311 |
|
| 1997 |
Shi J, Bergstrom DE. Assembly of novel DNA cycles with rigid tetrahedral linkers Angewandte Chemie - International Edition in English. 36: 111-113. DOI: 10.1002/Anie.199701111 |
0.444 |
|
| 1997 |
Shi J, Bergstrom DE. Neuartige DNA-Ringe mit starren tetraedrischen Spacern Angewandte Chemie. 109: 70-72. DOI: 10.1002/Ange.19971090116 |
0.392 |
|
| 1996 |
Luo J, Bergstrom DE, Barany F. Improving the fidelity of Thermus thermophilus DNA ligase Nucleic Acids Research. 24: 3071-3078. PMID 8760896 DOI: 10.1093/Nar/24.15.3071 |
0.43 |
|
| 1994 |
Nichols R, Andrews PC, Zhang P, Bergstrom DE. A universal nucleoside for use at ambiguous sites in DNA primers Nature. 369: 492-493. PMID 8202140 DOI: 10.1038/369492A0 |
0.361 |
|
| 1993 |
Wang G, Bergstrom DE. Synthesis of oligonucleotides containing N2-(5-carboxypentyl)-2′-deoxyguanosine and 5-[2-(4′-methyl-2,2′-dipyrid-4-yl-carboxamido)ethylthio]-2′-deoxyuridine Tetrahedron Letters. 34: 6721-6724. DOI: 10.1016/S0040-4039(00)61684-2 |
0.309 |
|
| 1984 |
Bergstrom DE, Ruth JL, Reddy PA, De Clercq E. Synthesis of (E)-5-(3,3,3-trifluoro-1-propenyl)-2′-deoxyuridine and related analogues: Potent and unusually selective antiviral activity of (E)-5-(3,3,3-trifluoro-1-propenyl)-2′-deoxyuridine against herpes simplex virus type 1 Journal of Medicinal Chemistry. 27: 279-284. PMID 6321735 DOI: 10.1002/Chin.198432324 |
0.337 |
|
| 1982 |
Bergstrom DE. Organometallic Intermediates in the Synthesis of Nucleoside Analogs Nucleosides and Nucleotides. 1: 1-34. DOI: 10.1080/07328318208079399 |
0.338 |
|
| 1973 |
BERGSTROM DE, INOUE I, LEONARD NJ. ChemInform Abstract: SYNTH. DES 335 NM-PHOTOPRODUKTES VON CYTOSIN UND 4-THIOURACIL Chemischer Informationsdienst. 4: no-no. DOI: 10.1002/chin.197312303 |
0.34 |
|
| 1972 |
Bergstrom DE, Inoue I, Leonard NJ. Synthesis of the 335-nm photoproduct of cytosine and 4-thiouracil. The Journal of Organic Chemistry. 37: 3902-5. PMID 4642387 DOI: 10.1021/Jo00797A029 |
0.458 |
|
| 1972 |
Bergstrom DE, Leonard NJ. Structure of the borohydride reduction product of photolinked 4-thiouracil and cytosine. Fluorescent probe of transfer ribonucleic acid tertiary structure. Journal of the American Chemical Society. 94: 6178-82. PMID 4559940 DOI: 10.1021/Ja00772A041 |
0.434 |
|
| 1972 |
Bergstrom DE, Leonard NJ. Photoreaction of 4-thiouracil with cytosine. Relation to photoreactions in Escherichia coli transfer ribonucleic acids Biochemistry. 11: 1-9. PMID 4550555 DOI: 10.1021/Bi00751A001 |
0.404 |
|
| 1972 |
BERGSTROM DE, LEONARD NJ. ChemInform Abstract: STRUKTUR DES BORHYDRID-RED.-PRODUKTS VON DURCH PHOTORK. VERBUNDENEM THIOURACIL UND CYTOSIN, FLUORESZENZ ALS ERKENNUNGSMERKMAL DER TERTIAER-STRUKTUR VON TRANSFER-RIBONUCLEINSAEURE Chemischer Informationsdienst. 3: no-no. DOI: 10.1002/Chin.197245461 |
0.399 |
|
| 1971 |
Leonard NJ, Bergstrom DE, Tolman GL. Photoproducts from 4-thiouracil and cytosine and from 4-thiouridine and cytidine: Refinement of tertiary tRNA structure Biochemical and Biophysical Research Communications. 44: 1524-1530. PMID 5160710 DOI: 10.1016/S0006-291X(71)80259-0 |
0.4 |
|
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