Petros Drineas - Publications

Affiliations: 
Rensselaer Polytechnic Institute, Troy, NY, United States 
Area:
Computer Science

63 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Jain PR, Yates M, de Celis CR, Drineas P, Jahanshad N, Thompson P, Paschou P. Multiomic approach and Mendelian randomization analysis identify causal associations between blood biomarkers and subcortical brain structure volumes. Neuroimage. 284: 120466. PMID 37995919 DOI: 10.1016/j.neuroimage.2023.120466  0.577
2023 Jain PR, Burch M, Martinez M, Mir P, Fichna JP, Zekanowski C, Rizzo R, Tümer Z, Barta C, Yannaki E, Stamatoyannopoulos J, Drineas P, Paschou P. Can polygenic risk scores help explain disease prevalence differences around the world? A worldwide investigation. Bmc Genomic Data. 24: 70. PMID 37986041 DOI: 10.1186/s12863-023-01168-9  0.61
2023 Bose A, Burch M, Chowdhury A, Paschou P, Drineas P. Structure-informed clustering for population stratification in association studies. Bmc Bioinformatics. 24: 411. PMID 37907836 DOI: 10.1186/s12859-023-05511-w  0.631
2023 Topaloudi A, Jain P, Martinez MB, Bryant JK, Reynolds G, Zagoriti Z, Lagoumintzis G, Zamba-Papanicolaou E, Tzartos J, Poulas K, Kleopa KA, Tzartos S, Georgitsi M, Drineas P, Paschou P. PheWAS and cross-disorder analysis reveal genetic architecture, pleiotropic loci and phenotypic correlations across 11 autoimmune disorders. Frontiers in Immunology. 14: 1147573. PMID 37809097 DOI: 10.3389/fimmu.2023.1147573  0.576
2023 Jain P, Yates M, de Celis CR, Drineas P, Jahanshad N, Thompson P, Paschou P. Multiomic approach and Mendelian randomization analysis identify causal associations between blood biomarkers and subcortical brain structure volumes. Medrxiv : the Preprint Server For Health Sciences. PMID 37066330 DOI: 10.1101/2023.03.30.23287968  0.577
2023 Jain P, Miller-Fleming T, Topaloudi A, Yu D, Drineas P, Georgitsi M, Yang Z, Rizzo R, Müller-Vahl KR, Tumer Z, Mol Debes N, Hartmann A, Depienne C, Worbe Y, Mir P, et al. Polygenic risk score-based phenome-wide association study identifies novel associations for Tourette syndrome. Translational Psychiatry. 13: 69. PMID 36823209 DOI: 10.1038/s41398-023-02341-5  0.581
2022 Chowdhury A, Bose A, Zhou S, Woodruff DP, Drineas P. A Fast, Provably Accurate Approximation Algorithm for Sparse Principal Component Analysis Reveals Human Genetic Variation Across the World. Research in Computational Molecular Biology : ... Annual International Conference, Recomb ... : Proceedings. Recomb (Conference : 2005- ). 13278: 86-106. PMID 36649383 DOI: 10.1007/978-3-031-04749-7_6  0.322
2022 Paschou P, Jin Y, Müller-Vahl K, Möller HE, Rizzo R, Hoekstra PJ, Roessner V, Mol Debes N, Worbe Y, Hartmann A, Mir P, Cath D, Neuner I, Eichele H, Zhang C, ... ... Drineas P, et al. Enhancing neuroimaging genetics through meta-analysis for Tourette syndrome (ENIGMA-TS): A worldwide platform for collaboration. Frontiers in Psychiatry. 13: 958688. PMID 36072455 DOI: 10.3389/fpsyt.2022.958688  0.588
2022 Yang Z, Paschou P, Drineas P. Reconstructing SNP allele and genotype frequencies from GWAS summary statistics. Scientific Reports. 12: 8242. PMID 35581276 DOI: 10.1038/s41598-022-12185-6  0.625
2021 Bose A, Platt DE, Parida L, Drineas P, Paschou P. Integrating Linguistics, Social Structure, and Geography to Model Genetic Diversity within India. Molecular Biology and Evolution. PMID 33481022 DOI: 10.1093/molbev/msaa321  0.613
2020 Kontopoulou E, Dexter G, Szpankowski W, Grama A, Drineas P. Randomized Linear Algebra Approaches to Estimate the von Neumann Entropy of Density Matrices Ieee Transactions On Information Theory. 66: 5003-5021. DOI: 10.1109/Tit.2020.2971991  0.344
2019 Drineas P, Tsetsos F, Plantinga A, Lazaridis I, Yannaki E, Razou A, Kanaki K, Michalodimitrakis M, Perez-Jimenez F, De Silvestro G, Renda MC, Stamatoyannopoulos JA, Kidd KK, Browning BL, Paschou P, et al. Genetic history of the population of Crete. Annals of Human Genetics. PMID 31192450 DOI: 10.1111/Ahg.12328  0.639
2019 Bose A, Kalantzis V, Kontopoulou E, Elkady M, Paschou P, Drineas P. TeraPCA: a fast and scalable software package to study genetic variation in tera-scale genotypes. Bioinformatics (Oxford, England). PMID 30957838 DOI: 10.1093/Bioinformatics/Btz157  0.644
2019 Iyer C, Avron H, Kollias G, Ineichen Y, Carothers C, Drineas P. A randomized least squares solver for terabyte-sized dense overdetermined systems Journal of Computational Science. 36: 100547. DOI: 10.1016/J.Jocs.2016.09.007  0.326
2018 Drineas P, Ipsen ICF, Kontopoulou E, Magdon-Ismail M. Structural Convergence Results for Approximation of Dominant Subspaces from Block Krylov Spaces Siam Journal On Matrix Analysis and Applications. 39: 567-586. DOI: 10.1137/16M1091745  0.313
2017 Alexander J, Mantzaris D, Georgitsi M, Drineas P, Paschou P. Variant Ranker: a web-tool to rank genomic data according to functional significance. Bmc Bioinformatics. 18: 341. PMID 28716001 DOI: 10.1186/S12859-017-1752-3  0.616
2017 Stamatoyannopoulos G, Bose A, Teodosiadis A, Tsetsos F, Plantinga A, Psatha N, Zogas N, Yannaki E, Zalloua P, Kidd KK, Browning BL, Stamatoyannopoulos J, Paschou P, Drineas P. Genetics of the peloponnesean populations and the theory of extinction of the medieval peloponnesean Greeks. European Journal of Human Genetics : Ejhg. PMID 28272534 DOI: 10.1038/Ejhg.2017.18  0.656
2017 Fountoulakis K, Kundu A, Kontopoulou E, Drineas P. A Randomized Rounding Algorithm for Sparse PCA Acm Transactions On Knowledge Discovery From Data. 11: 1-26. DOI: 10.1145/3046948  0.332
2017 Boutsidis C, Drineas P, Kambadur P, Kontopoulou E, Zouzias A. A randomized algorithm for approximating the log determinant of a symmetric positive definite matrix Linear Algebra and Its Applications. 533: 95-117. DOI: 10.1016/J.Laa.2017.07.004  0.724
2016 Alexander J, Potamianou H, Xing J, Deng L, Karagiannidis I, Tsetsos F, Drineas P, Tarnok Z, Rizzo R, Wolanczyk T, Farkas L, Nagy P, Szymanska U, Androutsos C, Tsironi V, et al. Targeted Re-Sequencing Approach of Candidate Genes Implicates Rare Potentially Functional Variants in Tourette Syndrome Etiology. Frontiers in Neuroscience. 10: 428. PMID 27708560 DOI: 10.3389/Fnins.2016.00428  0.633
2016 Forde NJ, Kanaan AS, Widomska J, Padmanabhuni SS, Nespoli E, Alexander J, Rodriguez Arranz JI, Fan S, Houssari R, Nawaz MS, Rizzo F, Pagliaroli L, Zilhäo NR, Aranyi T, Barta C, ... ... Drineas P, et al. TS-EUROTRAIN: A European-Wide Investigation and Training Network on the Etiology and Pathophysiology of Gilles de la Tourette Syndrome. Frontiers in Neuroscience. 10: 384. PMID 27601976 DOI: 10.3389/Fnins.2016.00384  0.617
2016 Tsetsos F, Padmanabhuni SS, Alexander J, Karagiannidis I, Tsifintaris M, Topaloudi A, Mantzaris D, Georgitsi M, Drineas P, Paschou P. Meta-Analysis of Tourette Syndrome and Attention Deficit Hyperactivity Disorder Provides Support for a Shared Genetic Basis. Frontiers in Neuroscience. 10: 340. PMID 27499730 DOI: 10.3389/Fnins.2016.00340  0.635
2016 Alexander J, Kalev O, Mehrabian S, Traykov L, Raycheva M, Kanakis D, Drineas P, Lutz MI, Ströbel T, Penz T, Schuster M, Bock C, Ferrer I, Paschou P, Kovacs GG. Familial early-onset dementia with complex neuropathologic phenotype and genomic background. Neurobiology of Aging. 42: 199-204. PMID 27143436 DOI: 10.1016/J.Neurobiolaging.2016.03.012  0.603
2016 Paul S, Drineas P. Feature Selection for Ridge Regression with Provable Guarantees. Neural Computation. 1-27. PMID 26890353 DOI: 10.1162/Neco_A_00816  0.328
2016 Drineas P, Mahoney MW. RandNLA: Randomized numerical linear algebra Communications of the Acm. 59: 80-90. DOI: 10.1145/2842602  0.313
2015 Boutsidis C, Zouzias A, Mahoney MW, Drineas P. Randomized dimensionality reduction for κ-means clustering Ieee Transactions On Information Theory. 61: 1045-1062. DOI: 10.1109/Tit.2014.2375327  0.709
2015 Nguyen NH, Drineas P, Tran TD. Tensor sparsification via a bound on the spectral norm of random tensors: Algorithm 1. Information and Inference. 4: 195-229. DOI: 10.1093/Imaiai/Iav004  0.341
2015 Paul S, Magdon-Ismail M, Drineas P. Feature selection for linear SVM with provable guarantees Journal of Machine Learning Research. 38: 735-743. DOI: 10.1016/J.Patcog.2016.05.018  0.356
2014 Paschou P, Drineas P, Yannaki E, Razou A, Kanaki K, Tsetsos F, Padmanabhuni SS, Michalodimitrakis M, Renda MC, Pavlovic S, Anagnostopoulos A, Stamatoyannopoulos JA, Kidd KK, Stamatoyannopoulos G. Maritime route of colonization of Europe. Proceedings of the National Academy of Sciences of the United States of America. 111: 9211-6. PMID 24927591 DOI: 10.1073/Pnas.1320811111  0.623
2014 Paul S, Boutsidis C, Magdon-Ismail M, Drineas P. Random projections for linear support vector machines Acm Transactions On Knowledge Discovery From Data. 8. DOI: 10.1145/2641760  0.718
2014 Boutsidis C, Drineas P, Magdon-ismail M. Near-optimal column-based matrix reconstruction Siam Journal On Computing. 43: 687-717. DOI: 10.1137/12086755X  0.723
2013 Hughey JR, Paschou P, Drineas P, Mastropaolo D, Lotakis DM, Navas PA, Michalodimitrakis M, Stamatoyannopoulos JA, Stamatoyannopoulos G. A European population in Minoan Bronze Age Crete. Nature Communications. 4: 1861. PMID 23673646 DOI: 10.1038/Ncomms2871  0.622
2013 Boutsidis C, Drineas P, Magdon-Ismail M. Near-optimal coresets for least-squares regression Ieee Transactions On Information Theory. 59: 6880-6892. DOI: 10.1109/Tit.2013.2272457  0.714
2013 Paul S, Boutsidis C, Magdon-Ismail M, Drineas P. Random projections for support vector machines Journal of Machine Learning Research. 31: 498-506.  0.702
2012 Stathias V, Sotiris GR, Karagiannidis I, Bourikas G, Martinis G, Papazoglou D, Tavridou A, Papanas N, Maltezos E, Theodoridis M, Vargemezis V, Manolopoulos VG, Speed WC, Kidd JR, Kidd KK, ... Drineas P, et al. Exploring genomic structure differences and similarities between the Greek and European HapMap populations: implications for association studies. Annals of Human Genetics. 76: 472-83. PMID 23061745 DOI: 10.1111/J.1469-1809.2012.00730.X  0.654
2011 Javed A, Drineas P, Mahoney MW, Paschou P. Efficient genomewide selection of PCA-correlated tSNPs for genotype imputation. Annals of Human Genetics. 75: 707-22. PMID 21902678 DOI: 10.1111/J.1469-1809.2011.00673.X  0.74
2011 Lewis J, Abas Z, Dadousis C, Lykidis D, Paschou P, Drineas P. Tracing cattle breeds with principal components analysis ancestry informative SNPs. Plos One. 6: e18007. PMID 21490966 DOI: 10.1371/Journal.Pone.0018007  0.721
2011 Sgourakis NG, Merced-Serrano M, Boutsidis C, Drineas P, Du Z, Wang C, Garcia AE. Atomic-level characterization of the ensemble of the Aβ(1-42) monomer in water using unbiased molecular dynamics simulations and spectral algorithms. Journal of Molecular Biology. 405: 570-83. PMID 21056574 DOI: 10.1016/J.Jmb.2010.10.015  0.694
2011 Boutsidis C, Drineas P, Magdon-Ismail M. Near optimal column-based matrix reconstruction Proceedings - Annual Ieee Symposium On Foundations of Computer Science, Focs. 305-314. DOI: 10.1109/FOCS.2011.21  0.706
2011 Drineas P, Zouzias A. A note on element-wise matrix sparsification via a matrix-valued Bernstein inequality Information Processing Letters. 111: 385-389. DOI: 10.1016/J.Ipl.2011.01.010  0.313
2011 Drineas P, Mahoney MW, Muthukrishnan S, Sarlós T. Faster least squares approximation Numerische Mathematik. 117: 219-249. DOI: 10.1007/S00211-010-0331-6  0.338
2011 Boutsidis C, Drineas P, Magdon-Ismail M. Sparse features for PCA-like linear regression Advances in Neural Information Processing Systems 24: 25th Annual Conference On Neural Information Processing Systems 2011, Nips 2011 0.718
2010 Paschou P, Lewis J, Javed A, Drineas P. Ancestry informative markers for fine-scale individual assignment to worldwide populations. Journal of Medical Genetics. 47: 835-47. PMID 20921023 DOI: 10.1136/Jmg.2010.078212  0.755
2010 Drineas P, Lewis J, Paschou P. Inferring geographic coordinates of origin for Europeans using small panels of ancestry informative markers. Plos One. 5: e11892. PMID 20805874 DOI: 10.1371/Journal.Pone.0011892  0.726
2010 Boutsidis C, Zouzias A, Drineas P. Random projections for κ-means clustering Advances in Neural Information Processing Systems 23: 24th Annual Conference On Neural Information Processing Systems 2010, Nips 2010 0.693
2009 Mahoney MW, Drineas P. CUR matrix decompositions for improved data analysis. Proceedings of the National Academy of Sciences of the United States of America. 106: 697-702. PMID 19139392 DOI: 10.1073/Pnas.0803205106  0.359
2009 Boutsidis C, Drineas P. Random projections for the nonnegative least-squares problem Linear Algebra and Its Applications. 431: 760-771. DOI: 10.1016/J.Laa.2009.03.026  0.722
2009 Boutsidis C, Mahoney MW, Drineas P. An improved approximation algorithm for the column subset selection problem Proceedings of the Annual Acm-Siam Symposium On Discrete Algorithms. 968-977.  0.698
2009 Boutsidis C, Mahoney MW, Drineas P. Unsupervised feature selection for the k-means clustering problem Advances in Neural Information Processing Systems 22 - Proceedings of the 2009 Conference. 153-161.  0.675
2008 Paschou P, Drineas P, Lewis J, Nievergelt CM, Nickerson DA, Smith JD, Ridker PM, Chasman DI, Krauss RM, Ziv E. Tracing sub-structure in the European American population with PCA-informative markers. Plos Genetics. 4: e1000114. PMID 18797516 DOI: 10.1371/Journal.Pgen.1000114  0.73
2008 Boutsidis C, Mahoney MW, Drineas P. Unsupervised feature selection for principal components analysis Proceedings of the Acm Sigkdd International Conference On Knowledge Discovery and Data Mining. 61-69. DOI: 10.1145/1401890.1401903  0.678
2008 Drineas P, Mahoney MW, Muthukrishnan S. Relative-error cur matrix decompositions Siam Journal On Matrix Analysis and Applications. 30: 844-881. DOI: 10.1137/07070471X  0.379
2008 Dasgupta A, Drineas P, Harb B, Kumar R, Mahoney MW. Sampling algorithms and coresets for ℓ p regression Siam Journal On Computing. 38: 2060-2078. DOI: 10.1137/070696507  0.304
2008 Mahoney MW, Maggioni M, Drineas P. Tensor-CUR decompositions for tensor-based data Siam Journal On Matrix Analysis and Applications. 30: 957-987. DOI: 10.1137/060665336  0.318
2008 Drineas P, Kannan R, Mahoney MW. Sampling subproblems of heterogeneous max-cut problems and approximation algorithms Random Structures and Algorithms. 32: 307-333. DOI: 10.1002/Rsa.V32:3  0.345
2007 Paschou P, Ziv E, Burchard EG, Choudhry S, Rodriguez-Cintron W, Mahoney MW, Drineas P. PCA-correlated SNPs for structure identification in worldwide human populations. Plos Genetics. 3: 1672-86. PMID 17892327 DOI: 10.1371/Journal.Pgen.0030160  0.673
2007 Paschou P, Mahoney MW, Javed A, Kidd JR, Pakstis AJ, Gu S, Kidd KK, Drineas P. Intra- and interpopulation genotype reconstruction from tagging SNPs. Genome Research. 17: 96-107. PMID 17151345 DOI: 10.1101/Gr.5741407  0.741
2007 Drineas P, Mahoney MW. A randomized algorithm for a tensor-based generalization of the singular value decomposition Linear Algebra and Its Applications. 420: 553-571. DOI: 10.1016/J.Laa.2006.08.023  0.35
2006 Drineas P, Kannan R, Mahoney MW. Fast Monte Carlo algorithms for matrices III: Computing a compressed approximate matrix decomposition Siam Journal On Computing. 36: 184-206. DOI: 10.1137/S0097539704442702  0.335
2006 Drineas P, Kannan R, Mahoney MW. Fast Monte Carlo algorithms for matrices II: Computing a low-rank approximation to a matrix Siam Journal On Computing. 36: 158-183. DOI: 10.1137/S0097539704442696  0.349
2006 Drineas P, Kannan R, Mahoney MW. Fast Monte Carlo algorithms for matrices I: Approximating matrix multiplication Siam Journal On Computing. 36: 132-157. DOI: 10.1137/S0097539704442684  0.358
2005 Akcoglu K, Drineas P, Kao MY. Fast universalisation of investment strategies Siam Journal On Computing. 34: 1-22. DOI: 10.1137/S0097539702405619  0.322
2004 Drineas P, Frieze A, Kannan R, Vempala S, Vinay V. Clustering large graphs via the Singular Value Decomposition Machine Learning. 56: 9-33. DOI: 10.1023/B:Mach.0000033113.59016.96  0.339
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