Thomas Liu, PhD - Publications

Center for Functional MRI University of California, San Diego, La Jolla, CA 

79 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Falahpour M, Chang C, Wong CW, Liu TT. Template-based prediction of vigilance fluctuations in resting-state fMRI. Neuroimage. PMID 29548849 DOI: 10.1016/j.neuroimage.2018.03.012  0.56
2016 Liu TT. Noise contributions to the fMRI signal: An Overview. Neuroimage. PMID 27612646 DOI: 10.1016/j.neuroimage.2016.09.008  1
2016 Wong CW, DeYoung PN, Liu TT. Differences in the resting-state fMRI global signal amplitude between the eyes open and eyes closed states are related to changes in EEG vigilance. Neuroimage. 124: 24-31. PMID 26327245 DOI: 10.1016/j.neuroimage.2015.08.053  0.56
2016 Wong CW, DeYoung PN, Liu TT. Differences in the resting-state fMRI global signal amplitude between the eyes open and eyes closed states are related to changes in EEG vigilance Neuroimage. 124: 24-31. DOI: 10.1016/j.neuroimage.2015.08.053  1
2015 Mackey S, Olafsson V, Aupperle RL, Lu K, Fonzo GA, Parnass J, Liu T, Paulus MP. Greater preference consistency during the Willingness-to-Pay task is related to higher resting state connectivity between the ventromedial prefrontal cortex and the ventral striatum. Brain Imaging and Behavior. PMID 26271206 DOI: 10.1007/s11682-015-9435-z  0.56
2015 Shin DD, Ozyurt IB, Brown GG, Fennema-Notestine C, Liu TT. The Cerebral Blood Flow Biomedical Informatics Research Network (CBFBIRN) data repository. Neuroimage. PMID 26032887 DOI: 10.1016/j.neuroimage.2015.05.059  1
2015 Olafsson V, Kundu P, Wong EC, Bandettini PA, Liu TT. Enhanced identification of BOLD-like components with multi-echo simultaneous multi-slice (MESMS) fMRI and multi-echo ICA. Neuroimage. 112: 43-51. PMID 25743045 DOI: 10.1016/j.neuroimage.2015.02.052  1
2014 Wong CW, Olafsson V, Plank M, Snider J, Halgren E, Poizner H, Liu TT. Resting-state fMRI activity predicts unsupervised learning and memory in an immersive virtual reality environment. Plos One. 9: e109622. PMID 25286145 DOI: 10.1371/journal.pone.0109622  1
2014 Bangen KJ, Nation DA, Clark LR, Harmell AL, Wierenga CE, Dev SI, Delano-Wood L, Zlatar ZZ, Salmon DP, Liu TT, Bondi MW. Interactive effects of vascular risk burden and advanced age on cerebral blood flow. Frontiers in Aging Neuroscience. 6: 159. PMID 25071567 DOI: 10.3389/fnagi.2014.00159  1
2014 Moses P, DiNino M, Hernandez L, Liu TT. Developmental changes in resting and functional cerebral blood flow and their relationship to the BOLD response. Human Brain Mapping. 35: 3188-98. PMID 24142547 DOI: 10.1002/hbm.22394  1
2014 Huang MX, Huang CW, Robb A, Angeles A, Nichols SL, Baker DG, Song T, Harrington DL, Theilmann RJ, Srinivasan R, Heister D, Diwakar M, Canive JM, Edgar JC, Chen YH, ... ... Liu TT, et al. MEG source imaging method using fast L1 minimum-norm and its applications to signals with brain noise and human resting-state source amplitude images. Neuroimage. 84: 585-604. PMID 24055704 DOI: 10.1016/j.neuroimage.2013.09.022  1
2013 Liu TT, Glover GH, Mueller BA, Greve DN, Brown GG. An introduction to normalization and calibration methods in functional MRI. Psychometrika. 78: 308-21. PMID 25107618 DOI: 10.1007/s11336-012-9309-x  1
2013 Greve DN, Brown GG, Mueller BA, Glover G, Liu TT. A survey of the sources of noise in fMRI. Psychometrika. 78: 396-416. PMID 25106392 DOI: 10.1007/s11336-012-9294-0  1
2013 Shin DD, Ozyurt IB, Liu TT. The Cerebral Blood Flow Biomedical Informatics Research Network (CBFBIRN) database and analysis pipeline for arterial spin labeling MRI data. Frontiers in Neuroinformatics. 7: 21. PMID 24151465 DOI: 10.3389/fninf.2013.00021  1
2013 Harris AD, Murphy K, Diaz CM, Saxena N, Hall JE, Liu TT, Wise RG. Cerebral blood flow response to acute hypoxic hypoxia. Nmr in Biomedicine. 26: 1844-52. PMID 24123253 DOI: 10.1002/nbm.3026  1
2013 Ho TC, Wu J, Shin DD, Liu TT, Tapert SF, Yang G, Connolly CG, Frank GK, Max JE, Wolkowitz O, Eisendrath S, Hoeft F, Banerjee D, Hood K, Hendren RL, et al. Altered cerebral perfusion in executive, affective, and motor networks during adolescent depression. Journal of the American Academy of Child and Adolescent Psychiatry. 52: 1076-1091.e2. PMID 24074474 DOI: 10.1016/j.jaac.2013.07.008  1
2013 Wong CW, Olafsson V, Tal O, Liu TT. The amplitude of the resting-state fMRI global signal is related to EEG vigilance measures. Neuroimage. 83: 983-90. PMID 23899724 DOI: 10.1016/j.neuroimage.2013.07.057  1
2013 Nation DA, Wierenga CE, Clark LR, Dev SI, Stricker NH, Jak AJ, Salmon DP, Delano-Wood L, Bangen KJ, Rissman RA, Liu TT, Bondi MW. Cortical and subcortical cerebrovascular resistance index in mild cognitive impairment and Alzheimer's disease. Journal of Alzheimer's Disease : Jad. 36: 689-98. PMID 23666173 DOI: 10.3233/JAD-130086  1
2013 Liu TT. Neurovascular factors in resting-state functional MRI. Neuroimage. 80: 339-48. PMID 23644003 DOI: 10.1016/j.neuroimage.2013.04.071  1
2013 Tal O, Diwakar M, Wong CW, Olafsson V, Lee R, Huang MX, Liu TT. Caffeine-Induced Global Reductions in Resting-State BOLD Connectivity Reflect Widespread Decreases in MEG Connectivity. Frontiers in Human Neuroscience. 7: 63. PMID 23459778 DOI: 10.3389/fnhum.2013.00063  1
2013 Wierenga CE, Clark LR, Dev SI, Shin DD, Jurick SM, Rissman RA, Liu TT, Bondi MW. Interaction of age and APOE genotype on cerebral blood flow at rest. Journal of Alzheimer's Disease : Jad. 34: 921-35. PMID 23302659 DOI: 10.3233/JAD-121897  1
2013 Jung Y, Samsonov AA, Liu TT, Buracas GT. High efficiency multishot interleaved spiral-in/out: acquisition for high-resolution BOLD fMRI. Magnetic Resonance in Medicine. 70: 420-8. PMID 23023395 DOI: 10.1002/mrm.24476  1
2013 Wong CW, Olafsson V, Plank M, Snider J, Halgren E, Poizner H, Liu T. Resting-state fMRI activity in the basal ganglia predicts unsupervised learning performance in a virtual reality environment International Ieee/Embs Conference On Neural Engineering, Ner. 1533-1536. DOI: 10.1109/NER.2013.6696238  1
2012 Wong CW, Olafsson V, Tal O, Liu TT. Anti-correlated networks, global signal regression, and the effects of caffeine in resting-state functional MRI. Neuroimage. 63: 356-64. PMID 22743194 DOI: 10.1016/j.neuroimage.2012.06.035  1
2012 Wierenga CE, Dev SI, Shin DD, Clark LR, Bangen KJ, Jak AJ, Rissman RA, Liu TT, Salmon DP, Bondi MW. Effect of mild cognitive impairment and APOE genotype on resting cerebral blood flow and its association with cognition. Journal of Cerebral Blood Flow and Metabolism : Official Journal of the International Society of Cerebral Blood Flow and Metabolism. 32: 1589-99. PMID 22549621 DOI: 10.1038/jcbfm.2012.58  1
2012 Huang MX, Nichols S, Robb A, Angeles A, Drake A, Holland M, Asmussen S, D'Andrea J, Chun W, Levy M, Cui L, Song T, Baker DG, Hammer P, McLay R, ... ... Liu TT, et al. An automatic MEG low-frequency source imaging approach for detecting injuries in mild and moderate TBI patients with blast and non-blast causes. Neuroimage. 61: 1067-82. PMID 22542638 DOI: 10.1016/j.neuroimage.2012.04.029  1
2012 Bangen KJ, Restom K, Liu TT, Wierenga CE, Jak AJ, Salmon DP, Bondi MW. Assessment of Alzheimer's disease risk with functional magnetic resonance imaging: an arterial spin labeling study. Journal of Alzheimer's Disease : Jad. 31: S59-74. PMID 22531427 DOI: 10.3233/JAD-2012-120292  1
2012 Jacobus J, Goldenberg D, Wierenga CE, Tolentino NJ, Liu TT, Tapert SF. Altered cerebral blood flow and neurocognitive correlates in adolescent cannabis users. Psychopharmacology. 222: 675-84. PMID 22395430 DOI: 10.1007/s00213-012-2674-4  1
2012 Glover GH, Mueller BA, Turner JA, van Erp TG, Liu TT, Greve DN, Voyvodic JT, Rasmussen J, Brown GG, Keator DB, Calhoun VD, Lee HJ, Ford JM, Mathalon DH, Diaz M, et al. Function biomedical informatics research network recommendations for prospective multicenter functional MRI studies. Journal of Magnetic Resonance Imaging : Jmri. 36: 39-54. PMID 22314879 DOI: 10.1002/jmri.23572  1
2012 Shin DD, Liu TT, Wong EC, Shankaranarayanan A, Jung Y. Pseudocontinuous arterial spin labeling with optimized tagging efficiency. Magnetic Resonance in Medicine. 68: 1135-44. PMID 22234782 DOI: 10.1002/mrm.24113  1
2012 Liu TT. The development of event-related fMRI designs. Neuroimage. 62: 1157-62. PMID 22037002 DOI: 10.1016/j.neuroimage.2011.10.008  1
2012 Rack-Gomer AL, Liu TT. Caffeine increases the temporal variability of resting-state BOLD connectivity in the motor cortex. Neuroimage. 59: 2994-3002. PMID 22032947 DOI: 10.1016/j.neuroimage.2011.10.001  1
2012 He H, Liu TT. A geometric view of global signal confounds in resting-state functional MRI. Neuroimage. 59: 2339-48. PMID 21982929 DOI: 10.1016/j.neuroimage.2011.09.018  1
2012 Smith SM, Bandettini PA, Miller KL, Behrens TE, Friston KJ, David O, Liu T, Woolrich MW, Nichols TE. The danger of systematic bias in group-level FMRI-lag-based causality estimation. Neuroimage. 59: 1228-9. PMID 21867760 DOI: 10.1016/j.neuroimage.2011.08.015  1
2012 Bura?as GT, Jung Y, Lee J, Buxton RB, Wong EC, Liu TT. On multiple alternating steady states induced by periodic spin phase perturbation waveforms. Magnetic Resonance in Medicine. 67: 1412-8. PMID 21826730 DOI: 10.1002/mrm.23105  1
2011 Snider J, Plank M, May L, Liu TT, Poizner H. Adaptation of a haptic robot in a 3T fMRI. Journal of Visualized Experiments : Jove. PMID 21989084 DOI: 10.3791/3364  1
2011 Diwakar M, Tal O, Liu TT, Harrington DL, Srinivasan R, Muzzatti L, Song T, Theilmann RJ, Lee RR, Huang MX. Accurate reconstruction of temporal correlation for neuronal sources using the enhanced dual-core MEG beamformer. Neuroimage. 56: 1918-28. PMID 21443954 DOI: 10.1016/j.neuroimage.2011.03.042  1
2011 Greve DN, Mueller BA, Liu T, Turner JA, Voyvodic J, Yetter E, Diaz M, McCarthy G, Wallace S, Roach BJ, Ford JM, Mathalon DH, Calhoun VD, Wible CG, Brown GG, et al. A novel method for quantifying scanner instability in fMRI. Magnetic Resonance in Medicine. 65: 1053-61. PMID 21413069 DOI: 10.1002/mrm.22691  1
2011 Tolentino NJ, Wierenga CE, Hall S, Tapert SF, Paulus MP, Liu TT, Smith TL, Schuckit MA. Alcohol effects on cerebral blood flow in subjects with low and high responses to alcohol. Alcoholism, Clinical and Experimental Research. 35: 1034-40. PMID 21332525 DOI: 10.1111/j.1530-0277.2011.01435.x  1
2010 Tian P, Teng IC, May LD, Kurz R, Lu K, Scadeng M, Hillman EM, De Crespigny AJ, D'Arceuil HE, Mandeville JB, Marota JJ, Rosen BR, Liu TT, Boas DA, Buxton RB, et al. Cortical depth-specific microvascular dilation underlies laminar differences in blood oxygenation level-dependent functional MRI signal. Proceedings of the National Academy of Sciences of the United States of America. 107: 15246-51. PMID 20696904 DOI: 10.1073/pnas.1006735107  1
2010 Jung Y, Wong EC, Liu TT. Multiphase pseudocontinuous arterial spin labeling (MP-PCASL) for robust quantification of cerebral blood flow. Magnetic Resonance in Medicine. 64: 799-810. PMID 20578056 DOI: 10.1002/mrm.22465  1
2010 Brumm KP, Perthen JE, Liu TT, Haist F, Ayalon L, Love T. An arterial spin labeling investigation of cerebral blood flow deficits in chronic stroke survivors. Neuroimage. 51: 995-1005. PMID 20211268 DOI: 10.1016/j.neuroimage.2010.03.008  1
2010 Liu TT, Liau J. Caffeine increases the linearity of the visual BOLD response. Neuroimage. 49: 2311-7. PMID 19854278 DOI: 10.1016/j.neuroimage.2009.10.040  1
2009 Rack-Gomer AL, Liau J, Liu TT. Caffeine reduces resting-state BOLD functional connectivity in the motor cortex. Neuroimage. 46: 56-63. PMID 19457356 DOI: 10.1016/j.neuroimage.2009.02.001  1
2009 Liau J, Liu TT. Inter-subject variability in hypercapnic normalization of the BOLD fMRI response. Neuroimage. 45: 420-30. PMID 19111622 DOI: 10.1016/j.neuroimage.2008.11.032  1
2009 Fleisher AS, Podraza KM, Bangen KJ, Taylor C, Sherzai A, Sidhar K, Liu TT, Dale AM, Buxton RB. Cerebral perfusion and oxygenation differences in Alzheimer's disease risk. Neurobiology of Aging. 30: 1737-48. PMID 18325636 DOI: 10.1016/j.neurobiolaging.2008.01.012  1
2009 Bangen KJ, Restom K, Liu TT, Jak AJ, Wierenga CE, Salmon DP, Bondi MW. Differential age effects on cerebral blood flow and BOLD response to encoding: associations with cognition and stroke risk. Neurobiology of Aging. 30: 1276-87. PMID 18160181 DOI: 10.1016/j.neurobiolaging.2007.11.012  1
2008 Liau J, Perthen JE, Liu TT. Caffeine reduces the activation extent and contrast-to-noise ratio of the functional cerebral blood flow response but not the BOLD response. Neuroimage. 42: 296-305. PMID 18514545 DOI: 10.1016/j.neuroimage.2008.04.177  1
2008 Restom K, Perthen JE, Liu TT. Calibrated fMRI in the medial temporal lobe during a memory-encoding task. Neuroimage. 40: 1495-502. PMID 18329291 DOI: 10.1016/j.neuroimage.2008.01.038  1
2008 Perthen JE, Lansing AE, Liau J, Liu TT, Buxton RB. Caffeine-induced uncoupling of cerebral blood flow and oxygen metabolism: a calibrated BOLD fMRI study. Neuroimage. 40: 237-47. PMID 18191583 DOI: 10.1016/j.neuroimage.2007.10.049  1
2008 Perthen JE, Bydder M, Restom K, Liu TT. SNR and functional sensitivity of BOLD and perfusion-based fMRI using arterial spin labeling with spiral SENSE at 3 T. Magnetic Resonance Imaging. 26: 513-22. PMID 18158226 DOI: 10.1016/j.mri.2007.10.008  1
2008 Buracas GT, Liu TT, Buxton RB, Frank LR, Wong EC. Imaging periodic currents using alternating balanced steady-state free precession. Magnetic Resonance in Medicine. 59: 140-8. PMID 18050317 DOI: 10.1002/mrm.21457  1
2008 Lu K, Perthen JE, Duncan RO, Zangwill LM, Liu TT. Noninvasive measurement of the cerebral blood flow response in human lateral geniculate nucleus with arterial spin labeling fMRI. Human Brain Mapping. 29: 1207-14. PMID 17712783 DOI: 10.1002/hbm.20459  1
2008 Lu K, Liu TT, Bydder M. Optimal phase difference reconstruction: comparison of two methods. Magnetic Resonance Imaging. 26: 142-5. PMID 17572035 DOI: 10.1016/j.mri.2007.04.015  1
2007 Restom K, Bangen KJ, Bondi MW, Perthen JE, Liu TT. Cerebral blood flow and BOLD responses to a memory encoding task: a comparison between healthy young and elderly adults. Neuroimage. 37: 430-9. PMID 17590353 DOI: 10.1016/j.neuroimage.2007.05.024  1
2007 Behzadi Y, Restom K, Liau J, Liu TT. A component based noise correction method (CompCor) for BOLD and perfusion based fMRI. Neuroimage. 37: 90-101. PMID 17560126 DOI: 10.1016/j.neuroimage.2007.04.042  1
2007 Brown GG, Perthen JE, Liu TT, Buxton RB. A primer on functional magnetic resonance imaging. Neuropsychology Review. 17: 107-25. PMID 17468956 DOI: 10.1007/s11065-007-9028-8  1
2007 Brown GG, Clark C, Liu TT. Measurement of cerebral perfusion with arterial spin labeling: Part 2. Applications. Journal of the International Neuropsychological Society : Jins. 13: 526-38. PMID 17445302 DOI: 10.1017/S1355617707070634  1
2007 Liu TT, Brown GG. Measurement of cerebral perfusion with arterial spin labeling: Part 1. Methods. Journal of the International Neuropsychological Society : Jins. 13: 517-25. PMID 17445301 DOI: 10.1017/S1355617707070646  1
2006 Woolrich MW, Chiarelli P, Gallichan D, Perthen J, Liu TT. Bayesian inference of hemodynamic changes in functional arterial spin labeling data. Magnetic Resonance in Medicine. 56: 891-906. PMID 16964610 DOI: 10.1002/mrm.21039  1
2006 Wong EC, Cronin M, Wu WC, Inglis B, Frank LR, Liu TT. Velocity-selective arterial spin labeling. Magnetic Resonance in Medicine. 55: 1334-41. PMID 16700025 DOI: 10.1002/mrm.20906  1
2006 Bolar DS, Levin DL, Hopkins SR, Frank LF, Liu TT, Wong EC, Buxton RB. Quantification of regional pulmonary blood flow using ASL-FAIRER. Magnetic Resonance in Medicine : Official Journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine. 55: 1308-17. PMID 16680681 DOI: 10.1002/mrm.20891  1
2006 Behzadi Y, Liu TT. Caffeine reduces the initial dip in the visual BOLD response at 3 T. Neuroimage. 32: 9-15. PMID 16635577 DOI: 10.1016/j.neuroimage.2006.03.005  1
2006 Restom K, Behzadi Y, Liu TT. Physiological noise reduction for arterial spin labeling functional MRI. Neuroimage. 31: 1104-15. PMID 16533609 DOI: 10.1016/j.neuroimage.2006.01.026  1
2005 Behzadi Y, Liu TT. An arteriolar compliance model of the cerebral blood flow response to neural stimulus. Neuroimage. 25: 1100-11. PMID 15850728 DOI: 10.1016/j.neuroimage.2004.12.057  1
2005 Liu TT, Wong EC. A signal processing model for arterial spin labeling functional MRI. Neuroimage. 24: 207-15. PMID 15588612 DOI: 10.1016/j.neuroimage.2004.09.047  1
2004 Liu TT, Behzadi Y, Restom K, Uludag K, Lu K, Buracas GT, Dubowitz DJ, Buxton RB. Caffeine alters the temporal dynamics of the visual BOLD response. Neuroimage. 23: 1402-13. PMID 15589104 DOI: 10.1016/j.neuroimage.2004.07.061  1
2004 Buxton RB, UludaÄŸ K, Dubowitz DJ, Liu TT. Modeling the hemodynamic response to brain activation. Neuroimage. 23: S220-33. PMID 15501093 DOI: 10.1016/j.neuroimage.2004.07.013  1
2004 UludaÄŸ K, Dubowitz DJ, Yoder EJ, Restom K, Liu TT, Buxton RB. Coupling of cerebral blood flow and oxygen consumption during physiological activation and deactivation measured with fMRI. Neuroimage. 23: 148-55. PMID 15325361 DOI: 10.1016/j.neuroimage.2004.05.013  1
2004 Paulus MP, Feinstein JS, Tapert SF, Liu TT. Trend detection via temporal difference model predicts inferior prefrontal cortex activation during acquisition of advantageous action selection. Neuroimage. 21: 733-43. PMID 14980576 DOI: 10.1016/j.neuroimage.2003.09.060  1
2004 Liu TT. Efficiency, power, and entropy in event-related fMRI with multiple trial types. Part II: design of experiments. Neuroimage. 21: 401-13. PMID 14741677 DOI: 10.1016/j.neuroimage.2003.09.031  1
2004 Liu TT, Frank LR. Efficiency, power, and entropy in event-related FMRI with multiple trial types. Part I: theory. Neuroimage. 21: 387-400. PMID 14741676 DOI: 10.1016/j.neuroimage.2003.09.030  1
2004 Obata T, Liu TT, Miller KL, Luh WM, Wong EC, Frank LR, Buxton RB. Discrepancies between BOLD and flow dynamics in primary and supplementary motor areas: application of the balloon model to the interpretation of BOLD transients. Neuroimage. 21: 144-53. PMID 14741651 DOI: 10.1016/j.neuroimage.2003.08.040  1
2003 Frank LR, Wong EC, Liu TT, Buxton RB. Increased diffusion sensitivity with hyperechos. Magnetic Resonance in Medicine : Official Journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine. 49: 1098-105. PMID 12768588 DOI: 10.1002/mrm.10457  1
2002 Liu TT, Wong EC, Frank LR, Buxton RB. Analysis and design of perfusion-based event-related fMRI experiments. Neuroimage. 16: 269-82. PMID 11969334 DOI: 10.1006/nimg.2001.1038  1
2001 Liu TT, Frank LR, Wong EC, Buxton RB. Detection power, estimation efficiency, and predictability in event-related fMRI. Neuroimage. 13: 759-73. PMID 11305903 DOI: 10.1006/nimg.2000.0728  1
2001 Miller KL, Luh WM, Liu TT, Martinez A, Obata T, Wong EC, Frank LR, Buxton RB. Nonlinear temporal dynamics of the cerebral blood flow response. Human Brain Mapping. 13: 1-12. PMID 11284042 DOI: 10.1002/hbm.1020  1
2001 Wong EC, Liu TT, Luh WM, Frank LR, Buxton RB. T(1) and T(2) selective method for improved SNR in CSF-attenuated imaging: T(2)-FLAIR. Magnetic Resonance in Medicine : Official Journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine. 45: 529-32. PMID 11241715 DOI: 10.1002/1522-2594(200103)45:3<529::AID-MRM1071>3.0.CO;2-L  1
2000 Liu TT, Fraser-Smith AC. Detection of transients in 1/f noise with the undecimated discrete wavelet transform Ieee Transactions On Signal Processing. 48: 1458-1462. DOI: 10.1109/78.839991  1
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