Ashley J. Pratt, Ph.D. - Publications

Affiliations: 
2013 Scripps Research Institute, La Jolla, La Jolla, CA, United States 
Area:
Biochemistry

2/59 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Pratt AJ, DiDonato M, Shin DS, Cabelli DE, Bruns CK, Belzer CA, Gorringe AR, Langford PR, Tabatabai LB, Kroll JS, Tainer JA, Getzoff ED. Structural, functional and immunogenic insights on Cu,Zn Superoxide Dismutase pathogenic virulence factors from Neisseria meningitidis and Brucella abortus. Journal of Bacteriology. PMID 26459556 DOI: 10.1128/Jb.00343-15  0.319
2012 Pratt AJ, Rambo RP, Lau PW, MacRae IJ. Preparation and characterization of the extracellular domain of human Sid-1. Plos One. 7: e33607. PMID 22509261 DOI: 10.1371/Journal.Pone.0033607  0.315
Low-probability matches (unlikely to be authored by this person)
2014 Pratt AJ, Shin DS, Merz GE, Rambo RP, Lancaster WA, Dyer KN, Borbat PP, Poole FL, Adams MW, Freed JH, Crane BR, Tainer JA, Getzoff ED. Aggregation propensities of superoxide dismutase G93 hotspot mutants mirror ALS clinical phenotypes. Proceedings of the National Academy of Sciences of the United States of America. 111: E4568-76. PMID 25316790 DOI: 10.1073/Pnas.1308531111  0.284
2012 Christie JM, Hitomi K, Arvai AS, Hartfield KA, Mettlen M, Pratt AJ, Tainer JA, Getzoff ED. Structural tuning of the fluorescent protein iLOV for improved photostability. The Journal of Biological Chemistry. 287: 22295-304. PMID 22573334 DOI: 10.1074/Jbc.M111.318881  0.282
2012 Guiley KZ, Pratt AJ, MacRae IJ. Single-pot enzymatic synthesis of Dicer-substrate siRNAs. Nucleic Acids Research. 40: e40. PMID 22189103 DOI: 10.1093/Nar/Gkr1174  0.27
2014 Merz GE, Borbat PP, Pratt AJ, Getzoff ED, Freed JH, Crane BR. Copper-based pulsed dipolar ESR spectroscopy as a probe of protein conformation linked to disease states. Biophysical Journal. 107: 1669-74. PMID 25296320 DOI: 10.1016/J.Bpj.2014.07.068  0.265
2009 Pratt AJ, MacRae IJ. The RNA-induced silencing complex: a versatile gene-silencing machine. The Journal of Biological Chemistry. 284: 17897-901. PMID 19342379 DOI: 10.1074/Jbc.R900012200  0.263
2012 Christie JM, Arvai AS, Baxter KJ, Heilmann M, Pratt AJ, O'Hara A, Kelly SM, Hothorn M, Smith BO, Hitomi K, Jenkins GI, Getzoff ED. Plant UVR8 photoreceptor senses UV-B by tryptophan-mediated disruption of cross-dimer salt bridges. Science (New York, N.Y.). 335: 1492-6. PMID 22323738 DOI: 10.1126/Science.1218091  0.254
2014 Shin DS, Pratt AJ, Tainer JA. Archaeal genome guardians give insights into eukaryotic DNA replication and damage response proteins. Archaea (Vancouver, B.C.). 2014: 206735. PMID 24701133 DOI: 10.1155/2014/206735  0.25
1987 Davis JT, Moore RN, Imperiali B, Pratt AJ, Kobayashi K, Masamune S, Sinskey AJ, Walsh CT, Fukui T, Tomita K. Biosynthetic thiolase from zoogloea ramigera. I. Preliminary characterization and analysis of proton transfer reaction. The Journal of Biological Chemistry. 262: 82-9. PMID 2878927  0.148
1987 Baldwin JE, Killin SJ, Pratt AJ, Sutherland JD, Turner NJ, Crabbe MJ, Abraham EP, Willis AC. Purification and characterization of cloned isopenicillin N synthetase. The Journal of Antibiotics. 40: 652-9. PMID 3301770 DOI: 10.7164/Antibiotics.40.652  0.131
1996 Coulter CV, Gerrard JA, Kraunsoe JAE, Moore DJ, Pratt AJ. (S)-aspartate semi-aldehyde: Synthetic and structural studies Tetrahedron. 52: 7127-7136. DOI: 10.1016/0040-4020(96)00330-4  0.131
2012 Pratt AJ, Getzoff ED, Perry JJ. Amyotrophic lateral sclerosis: update and new developments. Degenerative Neurological and Neuromuscular Disease. 2012: 1-14. PMID 23019386 DOI: 10.2147/DNND.S19803  0.129
2010 Pratt AJ. Evolution, selection and the metabolic foundations of the RNA world Artificial Life Xii: Proceedings of the 12th International Conference On the Synthesis and Simulation of Living Systems, Alife 2010. 49-56.  0.121
2016 Zwier MC, Pratt A, Adelman JL, Kaus JW, Zuckerman DM, Chong LT. Efficient Atomistic Simulation of Pathways and Calculation of Rate Constants for a Protein-Peptide Binding Process: Application to the MDM2 Protein and an Intrinsically Disordered p53 Peptide. The Journal of Physical Chemistry Letters. PMID 27532687 DOI: 10.1021/Acs.Jpclett.6B01502  0.12
1995 Bailey JH, Coulter CV, Pratt AJ, Robinson WT. Synthesis and Diels-Alder reactions of thioisobenzofurans Journal of the Chemical Society, Perkin Transactions 1. 589-592.  0.117
1991 Baldwin JE, Jesudason CD, Moloney MG, Morgan DR, Pratt AJ. The synthesis of substituted aryl diazirines. A bifunctional reagent suitable for application to photoaffinity labelling studies Tetrahedron. 47: 5603-5614. DOI: 10.1016/S0040-4020(01)80991-1  0.112
2011 Pratt AJ. Prebiological evolution and the metabolic origins of life Artificial Life. 17: 203-217. PMID 21554111 DOI: 10.1162/artl_a_00032  0.109
1990 Baldwin JE, Coates JB, Moloney MG, Pratt AJ, Willis AC. Photoaffinity labelling of isopenicillin N synthetase. The Biochemical Journal. 266: 561-7. PMID 2317203  0.107
2005 Pratt AJ, Rendle PM. Thermal decomposition of 1,1-bis(methylthio)ethene, pyran-2-one Diels-Alder adducts: An unusual [1,5]-sulfenyl rearrangement Arkivoc. 2006: 210-217.  0.093
1969 Pratt AJ, Smith O, Davis CO. Jewel-A new potato variety with high solids and excellent chipping qualities American Potato Journal. 46: 83-87. DOI: 10.1007/BF02871445  0.09
2015 Suárez E, Pratt AJ, Chong LT, Zuckerman DM. Estimating first-passage time distributions from weighted ensemble simulations and non-Markovian analyses. Protein Science : a Publication of the Protein Society. PMID 26131764 DOI: 10.1002/Pro.2738  0.089
2011 Pratt AJ, Rendle PM, Steel PJ. Anticancer prodrug studies: DielsAlder chemistry of 1-methylthio-1-(p- tolylsulfonyl)ethene Australian Journal of Chemistry. 64: 945-950. DOI: 10.1071/CH10450  0.088
1989 Baldwin JE, Coates JB, Halpern JB, Moloney MG, Pratt AJ. Photoaffinity labelling of isopenicillin N synthetase by laser-flash photolysis. The Biochemical Journal. 261: 197-204. PMID 2775205 DOI: 10.1042/Bj2610197  0.087
1998 Bates RW, Pratt AJ, Rendle PM, Robinson WT. Diels-alder reactions of l,1-Bis(methylthio)ethene with pyran-2-ones Australian Journal of Chemistry. 51: 383-387.  0.084
2004 de Zwart II, Meade SJ, Pratt AJ. Biomimetic phosphoryl transfer catalysed by iron(II)-mineral precipitates Geochimica Et Cosmochimica Acta. 68: 4093-4098. DOI: 10.1016/j.gca.2004.01.028  0.081
1990 Baldwin JE, McConnaughie AW, Moloney MG, Pratt AJ, Bo Shin S. New photolabile phosphate protecting group Tetrahedron. 46: 6879-6884. DOI: 10.1016/S0040-4020(01)87875-3  0.078
1995 Peach JM, Pratt AJ, Snaith JS. Photolabile benzoin and furoin esters of a biologically active peptide Tetrahedron. 51: 10013-10024. DOI: 10.1016/0040-4020(95)00573-Q  0.077
1987 Baldwin JE, Pratt AJ, Moloney MG. The synthesis of aryl substituted analogues of phenoxyacetyl-L-cysteinyl-D-valine and phenylacetyl-L-cysteinyl-D-valine. Application to the photoaffinity labeling of isopenicillin N synthetase Tetrahedron. 43: 2565-2575. DOI: 10.1016/S0040-4020(01)81664-1  0.072
1987 Baldwin JE, Ng SC, Pratt AJ. Synthesis of phenoxyacetyl-N-sulphonyl cycloserine Tetrahedron Letters. 28: 4319-4320. DOI: 10.1016/S0040-4039(00)96496-7  0.071
1982 Pratt AJ, Thomas EJ. On the use of E-1-methoxymethoxybut-2-enyl(tri-n-butyl)stannane as a threo-selective, homo-enolate equivalent Journal of the Chemical Society - Series Chemical Communications. 1115-1117. DOI: 10.1039/C39820001115  0.065
1995 Andrews DM, Gregoriou M, Page TCM, Peach JM, Pratt AJ. Potential mechanism-based tyrosine kinase inhibitors. Part 2. Design and synthesis of peptides containing heterocyclic tyrosine analogues Journal of the Chemical Society, Perkin Transactions 1. 1335-1340.  0.063
1995 Andrews DM, Page TCM, Peach JM, Pratt AJ. Potential mechanism-based tyrosine kinase inhibitors. Part 1. Phosphorylation chemistry of pyridine N-oxides Journal of the Chemical Society, Perkin Transactions 1. 1045-1048.  0.062
1999 Coulter CV, Gerrard JA, Kraunsoe JAE, Pratt AJ. Escherichia coli dihydrodipicolinate synthase and dihydrodipicolinate reductase: Kinetic and inhibition studies of two putative herbicide targets Pesticide Science. 55: 887-895. DOI: 10.1002/(SICI)1096-9063(199909)55:9<887::AID-PS36>3.0.CO;2-B  0.058
1996 Alexander RP, Bates RW, Pratt AJ, Kraunsoe JAE. A N-nitrosochloroethyl-cephalosporin carbamate prodrug for antibody-directed enzyme prodrug therapy (ADEPT) Tetrahedron. 52: 5983-5988. DOI: 10.1016/0040-4020(96)00228-1  0.058
1953 Pratt AJ, Lamb J, Wright JD, Bradley GA. Yield, tuber set, and quality of potatoes - Effect of irrigation, date of planting, and straw mulch on several varieties in Upstate New York 1948-51 American Potato Journal. 30: 83. DOI: 10.1007/BF02859925  0.057
2012 Nelson XJ, Pratt AJ, Cheseto X, Torto B, Jackson RR. Mediation of a plant-spider association by specific volatile compounds. Journal of Chemical Ecology. 38: 1081-92. PMID 22914959 DOI: 10.1007/s10886-012-0175-x  0.057
1991 Alexander RP, Beeley NRA, O'Driscoll M, O'Neill FP, Millican TA, Pratt AJ, Willenbrock FW. Cephalosporin Nitrogen Mustard Carbamate prodrugs for "ADEPT" Tetrahedron Letters. 32: 3269-3272. DOI: 10.1016/S0040-4039(00)79741-3  0.057
1967 Feldtman HD, Mcphee JR, Pratt AJ. Treatment of Wool With Polyolefins Textile Research Journal. 37: 46-53. DOI: 10.1177/004051756703700104  0.057
1989 Pratt AJ, Thomas EJ. Stereoselective thermal reactions between (E)-1-alkoxymethoxybut-2-enyl- (tributyl)stannanes and aldehydes Journal of the Chemical Society, Perkin Transactions 1. 1521-1527.  0.053
1984 Jephcote VJ, Pratt AJ, Thomas EJ. Synthesis and absolute configuration of optically active E-1-Alkoxymethoxybut-2-enyl(tri-n-butyl)stannanes: Stereoselective reactions with aldehydes Journal of the Chemical Society, Chemical Communications. 800-802. DOI: 10.1039/C39840000800  0.047
1987 Baldwin JE, Dyer RL, Ng SC, Pratt AJ, Russell MA. Application of E. Coli aspartate transaminase to amino acid synthesis Tetrahedron Letters. 28: 3745-3746. DOI: 10.1016/S0040-4039(00)96374-3  0.046
1955 Bradley GA, Pratt AJ. The effect of different combinations of soil moisture and nitrogen levels on early plant development and tuber set of the potato American Potato Journal. 32: 254-258. DOI: 10.1007/BF02868837  0.046
1948 Pratt AJ. Yield and grades of blight resistant potatoes grown in twenty different locations in New York state in 1947 American Potato Journal. 25: 209-215. DOI: 10.1007/BF02895951  0.043
1954 Bradley GA, Pratt AJ. The response of potatoes to irrigation at different levels of available moisture American Potato Journal. 31: 305-310. DOI: 10.1007/BF02861598  0.042
1990 Pratt AJ. Filter design criteria Iee Colloquium (Digest) 0.042
1969 Pratt AJ. Pride-A new early potato variety with shallow eyes and some scab resistance American Potato Journal. 46: 88-90. DOI: 10.1007/BF02871446  0.038
1989 Jephcote VJ, Pratt AJ, Thomas EJ. Synthesis of optically active (E)-1-alkoxymethoxybut-2-enyl(tributyl) stannanes: Stereochemistry of their thermal reactions with aldehydes Journal of the Chemical Society, Perkin Transactions 1. 1529-1535.  0.035
1955 PRATT AJ, SMITH DC, FERGUSON FP. Rôle of the adrenal gland in the response of plasma potassium of the rat to moderate and severe hypoxia Endocrinology. 57: 450-455. PMID 13261948  0.034
1953 SUSSMAN KE, PRATT AJ, SMITH DC, FERGUSON FP. Effects of acute decompression stress upon plasma potassium and hematocrit in the rat Bulletin of the School of Medicine (Baltimore, Md.). 38: 164-167. PMID 13141063  0.033
1967 Leeder JD, Pratt AJ, Watt IC. Wool–polymer systems: Effect of vinyl polymers on water absorption Journal of Applied Polymer Science. 11: 1649-1659. DOI: 10.1002/app.1967.070110905  0.032
2011 Parker EJ, Pratt AJ. Amino Acid Biosynthesis Amino Acids, Peptides and Proteins in Organic Chemistry. 3: 1-82. DOI: 10.1002/9783527631803.ch1  0.032
2016 Pratt AJ. Violence and the competition for sovereignty in Cherokee Country, 1829–1835 American Nineteenth Century History. 17: 181-197. DOI: 10.1080/14664658.2016.1215018  0.03
1994 Gander RE, McClements JD, Sanderson LK, Rostad BA, Josephson KE, Pratt AJ. Sprint Start Instrumentation Ieee Transactions On Instrumentation and Measurement. 43: 637-643. DOI: 10.1109/19.310180  0.029
1991 Pratt AJ, Gander RE, Brandell BR. Real-Time Digital Median Frequency Estimator for Surface Myoelectric Signals Ieee Transactions On Biomedical Engineering. 38: 306-309. PMID 2066147 DOI: 10.1109/10.133215  0.027
1987 Pratt AJ, Gander RE, Brandell BR. REAL-TIME MEDIAN FREQUENCY ESTIMATOR Ieee/Engineering in Medicine and Biology Society Annual Conference. 1840-1841.  0.019
2000 Pratt AJ. LPG Supply and Demand Gastech Conference Proceedings 0.015
1970 Pratt AJ, Stone HL, Stegall HF, Kaufman WC. Circulatory impairment during exposure to ambient pressures of 4 mm Hg and 55 mm Hg Journal of Applied Physiology. 29: 117-180. PMID 5428885  0.012
2015 Zwier MC, Adelman JL, Kaus JW, Pratt AJ, Wong KF, Rego NB, Suárez E, Lettieri S, Wang DW, Grabe M, Zuckerman DM, Chong LT. WESTPA: An interoperable, highly scalable software package for weighted ensemble simulation and analysis Journal of Chemical Theory and Computation. 11: 800-809. DOI: 10.1021/ct5010615  0.011
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