Jeremy R. Manning, Ph.D. - Publications

Affiliations: 
2006-2011 Neuroscience University of Pennsylvania, Philadelphia, PA, United States 
 2011-2015 Princeton Neuroscience Institute and Department of Computer Science Princeton University, Princeton, NJ 
 2015- Psychological and Brain Sciences Dartmouth College, Hanover, NH, United States 
Area:
memory, ECoG, fMRI, brain network dynamics, Bayesian models
Website:
http://www.context-lab.com

50 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Owen LLW, Chang TH, Manning JR. High-level cognition during story listening is reflected in high-order dynamic correlations in neural activity patterns. Nature Communications. 12: 5728. PMID 34593791 DOI: 10.1038/s41467-021-25876-x  1
2021 Chen HT, Manning JR, van der Meer MAA. Between-subject prediction reveals a shared representational geometry in the rodent hippocampus. Current Biology : Cb. PMID 34428470 DOI: 10.1016/j.cub.2021.07.061  0.52
2021 Manning JR. Episodic memory: Mental time travel or a quantum "memory wave" function? Psychological Review. PMID 34014710 DOI: 10.1037/rev0000283  0.01
2021 Chang LJ, Jolly E, Cheong JH, Rapuano KM, Greenstein N, Chen PA, Manning JR. Endogenous variation in ventromedial prefrontal cortex state dynamics during naturalistic viewing reflects affective experience. Science Advances. 7. PMID 33893106 DOI: 10.1126/sciadv.abf7129  0.2
2021 Heusser AC, Fitzpatrick PC, Manning JR. Geometric models reveal behavioural and neural signatures of transforming experiences into memories. Nature Human Behaviour. PMID 33574605 DOI: 10.1038/s41562-021-01051-6  1
2020 Owen LLW, Muntianu TA, Heusser AC, Daly PM, Scangos KW, Manning JR. A Gaussian Process Model of Human Electrocorticographic Data. Cerebral Cortex (New York, N.Y. : 1991). PMID 32495832 DOI: 10.1093/Cercor/Bhaa115  1
2018 Ziman K, Heusser AC, Fitzpatrick PC, Field CE, Manning JR. Is automatic speech-to-text transcription ready for use in psychological experiments? Behavior Research Methods. PMID 29687235 DOI: 10.3758/S13428-018-1037-4  1
2018 Manning JR, Zhu X, Willke TL, Ranganath R, Stachenfeld K, Hasson U, Blei DM, Norman KA. A probabilistic approach to discovering dynamic full-brain functional connectivity patterns. Neuroimage. PMID 29448074 DOI: 10.1016/J.Neuroimage.2018.01.071  1
2017 Ziman K, Heusser AC, Fitzpatrick PC, Field CE, Manning JR. Quail: A Python toolbox for analyzing and plotting free recall data The Journal of Open Source Software. 2: 424. DOI: 10.21105/Joss.00424  1
2016 Yeung EN, Treskes P, Martin SF, Manning JR, Dunbar DR, Rogers SM, Le Bihan T, Lockman KA, Morley SD, Hayes PC, Nelson LJ, Plevris JN. Erratum to: Fibrinogen production is enhanced in an in-vitro model of non-alcoholic fatty liver disease: an isolated risk factor for cardiovascular events? Lipids in Health and Disease. 15: 125. PMID 27480541 DOI: 10.1186/s12944-016-0290-8  1
2016 Manning JR, Hulbert JC, Williams J, Piloto L, Sahakyan L, Norman KA. A neural signature of contextually mediated intentional forgetting. Psychonomic Bulletin & Review. PMID 27150815 DOI: 10.3758/S13423-016-1024-7  1
2016 Betz BB, Jenks SJ, Cronshaw AD, Lamont DJ, Cairns C, Manning JR, Goddard J, Webb DJ, Mullins JJ, Hughes J, McLachlan S, Strachan MW, Price JF, Conway BR. Urinary peptidomics in a rodent model of diabetic nephropathy highlights epidermal growth factor as a biomarker for renal deterioration in patients with type 2 diabetes. Kidney International. 89: 1125-35. PMID 27083286 DOI: 10.1016/J.Kint.2016.01.015  1
2016 Khulan B, Liu L, Rose CM, Boyle AK, Manning JR, Drake AJ. Glucocorticoids accelerate maturation of the heme pathway in fetal liver through effects on transcription and DNA methylation. Epigenetics. 0. PMID 26889791 DOI: 10.1080/15592294.2016.1144006  1
2016 Sparrow S, Manning JR, Cartier J, Anblagan D, Bastin ME, Piyasena C, Pataky R, Moore EJ, Semple SI, Wilkinson AG, Evans M, Drake AJ, Boardman JP. Epigenomic profiling of preterm infants reveals DNA methylation differences at sites associated with neural function. Translational Psychiatry. 6: e716. PMID 26784970 DOI: 10.1038/tp.2015.210  1
2015 Manning JR, Withers CN, Levitan B, Smith JD, Andres DA, Satin J. Loss of Rad-GTPase Produces a Novel Adaptive Cardiac Phenotype Resistant to Systolic decline with Aging. American Journal of Physiology. Heart and Circulatory Physiology. ajpheart.00389.2015. PMID 26371164 DOI: 10.1152/Ajpheart.00389.2015  1
2015 Yeung EN, Treskes P, Martin SF, Manning JR, Dunbar DR, Rogers SM, Le Bihan T, Lockman KA, Morley SD, Hayes PC, Nelson LJ, Plevris JN. Fibrinogen production is enhanced in an in-vitro model of non-alcoholic fatty liver disease: an isolated risk factor for cardiovascular events? Lipids in Health and Disease. 14: 86. PMID 26256740 DOI: 10.1186/s12944-015-0069-3  1
2015 Rabinovich RA, Drost E, Manning JR, Dunbar DR, Díaz-Ramos M, Lakhdar R, Bastos R, MacNee W. Genome-wide mRNA expression profiling in vastus lateralis of COPD patients with low and normal fat free mass index and healthy controls. Respiratory Research. 16: 1. PMID 25567521 DOI: 10.1186/S12931-014-0139-5  1
2015 Rog-Zielinska EA, Craig MA, Manning JR, Richardson RV, Gowans GJ, Dunbar DR, Gharbi K, Kenyon CJ, Holmes MC, Hardie DG, Smith GL, Chapman KE. Glucocorticoids promote structural and functional maturation of foetal cardiomyocytes: a role for PGC-1α. Cell Death and Differentiation. 22: 1106-16. PMID 25361084 DOI: 10.1038/Cdd.2014.181  1
2014 Khulan B, Manning JR, Dunbar DR, Seckl JR, Raikkonen K, Eriksson JG, Drake AJ. Epigenomic profiling of men exposed to early-life stress reveals DNA methylation differences in association with current mental state. Translational Psychiatry. 4: e448. PMID 25247593 DOI: 10.1038/tp.2014.94  1
2014 Conway BR, Betz B, Sheldrake TA, Manning JR, Dunbar DR, Dobyns A, Hughes J, Mullins JJ. Tight blood glycaemic and blood pressure control in experimental diabetic nephropathy reduces extracellular matrix production without regression of fibrosis. Nephrology (Carlton, Vic.). 19: 802-13. PMID 25196678 DOI: 10.1111/Nep.12335  1
2014 Benson NC, Manning JR, Brainard DH. Unsupervised learning of cone spectral classes from natural images. Plos Computational Biology. 10: e1003652. PMID 24967877 DOI: 10.1371/Journal.Pcbi.1003652  1
2014 Manning JR, Ranganath R, Norman KA, Blei DM. Topographic factor analysis: a Bayesian model for inferring brain networks from neural data. Plos One. 9: e94914. PMID 24804795 DOI: 10.1371/Journal.Pone.0094914  1
2014 Manning JR, Lew TF, Li N, Sekuler R, Kahana MJ. MAGELLAN: a cognitive map-based model of human wayfinding. Journal of Experimental Psychology. General. 143: 1314-30. PMID 24490847 DOI: 10.1037/A0035542  1
2014 Manning JR, Ranganath R, Keung W, Turk-Browne NB, Cohen JD, Norman KA, Blei DM. Hierarchical topographic factor analysis Proceedings - 2014 International Workshop On Pattern Recognition in Neuroimaging, Prni 2014. DOI: 10.1109/PRNI.2014.6858530  1
2013 Manning JR, Yin G, Kaminski CN, Magyar J, Feng HZ, Penn J, Sievert G, Thompson K, Jin JP, Andres DA, Satin J. Rad GTPase deletion increases L-type calcium channel current leading to increased cardiac contraction. Journal of the American Heart Association. 2: e000459. PMID 24334906 DOI: 10.1161/Jaha.113.000459  1
2013 Wijeratne AB, Manning JR, Schultz Jel J, Greis KD. Quantitative phosphoproteomics using acetone-based peptide labeling: method evaluation and application to a cardiac ischemia/reperfusion model. Journal of Proteome Research. 12: 4268-79. PMID 24016359 DOI: 10.1021/Pr400835K  1
2013 Manning JR, Perkins SO, Sinclair EA, Gao X, Zhang Y, Newman G, Pyle WG, Schultz Jel J. Low molecular weight fibroblast growth factor-2 signals via protein kinase C and myofibrillar proteins to protect against postischemic cardiac dysfunction. American Journal of Physiology. Heart and Circulatory Physiology. 304: H1382-96. PMID 23479264 DOI: 10.1152/ajpheart.00613.2012  1
2013 Bellamy CO, Maxwell RS, Prost S, Azodo IA, Powell JJ, Manning JR. The value of immunophenotyping hepatocellular adenomas: consecutive resections at one UK centre. Histopathology. 62: 431-45. PMID 23020256 DOI: 10.1111/his.12011  1
2012 Ramachandran P, Pellicoro A, Vernon MA, Boulter L, Aucott RL, Ali A, Hartland SN, Snowdon VK, Cappon A, Gordon-Walker TT, Williams MJ, Dunbar DR, Manning JR, van Rooijen N, Fallowfield JA, et al. Differential Ly-6C expression identifies the recruited macrophage phenotype, which orchestrates the regression of murine liver fibrosis. Proceedings of the National Academy of Sciences of the United States of America. 109: E3186-95. PMID 23100531 DOI: 10.1073/pnas.1119964109  1
2012 Manning JR, Sperling MR, Sharan A, Rosenberg EA, Kahana MJ. Spontaneously reactivated patterns in frontal and temporal lobe predict semantic clustering during memory search. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 32: 8871-8. PMID 22745488 DOI: 10.1523/Jneurosci.5321-11.2012  1
2012 Manning JR, Kahana MJ. Interpreting semantic clustering effects in free recall. Memory (Hove, England). 20: 511-7. PMID 22646657 DOI: 10.1080/09658211.2012.683010  1
2012 Manning JR, Carpenter G, Porter DR, House SL, Pietras DA, Doetschman T, Schultz Jel J. Fibroblast growth factor-2-induced cardioprotection against myocardial infarction occurs via the interplay between nitric oxide, protein kinase signaling, and ATP-sensitive potassium channels. Growth Factors (Chur, Switzerland). 30: 124-39. PMID 22304432 DOI: 10.3109/08977194.2012.656759  1
2012 Conway BR, Rennie J, Bailey MA, Dunbar DR, Manning JR, Bellamy CO, Hughes J, Mullins JJ. Hyperglycemia and renin-dependent hypertension synergize to model diabetic nephropathy. Journal of the American Society of Nephrology : Jasn. 23: 405-11. PMID 22193383 DOI: 10.1681/Asn.2011060577  1
2011 Manning JR, Polyn SM, Baltuch GH, Litt B, Kahana MJ. Oscillatory patterns in temporal lobe reveal context reinstatement during memory search. Proceedings of the National Academy of Sciences of the United States of America. 108: 12893-7. PMID 21737744 DOI: 10.1073/Pnas.1015174108  1
2010 Fox KA, Carruthers KF, Dunbar DR, Graham C, Manning JR, De Raedt H, Buysschaert I, Lambrechts D, Van de Werf F. Underestimated and under-recognized: the late consequences of acute coronary syndrome (GRACE UK-Belgian Study). European Heart Journal. 31: 2755-64. PMID 20805110 DOI: 10.1093/eurheartj/ehq326  1
2010 Manning JR, Bailey MA, Soares DC, Dunbar DR, Mullins JJ. In silico structure-function analysis of pathological variation in the HSD11B2 gene sequence. Physiological Genomics. 42: 319-30. PMID 20571110 DOI: 10.1152/Physiolgenomics.00053.2010  1
2009 Dunn TB, Ellis JM, Kofink CC, Manning JR, Overman LE. Asymmetric construction of rings A-D of daphnicyclidin-type alkaloids. Organic Letters. 11: 5658-61. PMID 19904991 DOI: 10.1021/Ol902373M  1
2009 Manning JR, Jacobs J, Fried I, Kahana MJ. Broadband shifts in local field potential power spectra are correlated with single-neuron spiking in humans. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 29: 13613-20. PMID 19864573 DOI: 10.1523/Jneurosci.2041-09.2009  1
2009 Manning JR, Hedley A, Mullins JJ, Dunbar DR. Automated seeding of specialised wiki knowledgebases with BioKb. Bmc Bioinformatics. 10: 291. PMID 19758431 DOI: 10.1186/1471-2105-10-291  1
2009 Manning JR, Brainard DH. Optimal design of photoreceptor mosaics: why we do not see color at night. Visual Neuroscience. 26: 5-19. PMID 19193250 DOI: 10.1017/S095252380808084X  1
2009 Manning JR, Sexton T, Childers SR, Davies HM. 1-Naphthyl and 4-indolyl arylalkylamines as selective monoamine reuptake inhibitors. Bioorganic & Medicinal Chemistry Letters. 19: 58-61. PMID 19038547 DOI: 10.1016/J.Bmcl.2008.11.022  1
2008 Manning JR, Davies HM. Efficient route to 4H-1,3-oxazines through ring expansion of isoxazoles by rhodium carbenoids. Tetrahedron. 64: 6901-6908. PMID 19148263 DOI: 10.1016/J.Tet.2008.03.010  1
2008 Manning JR, Davies HM. One-pot synthesis of highly functionalized pyridines via a rhodium carbenoid induced ring expansion of isoxazoles. Journal of the American Chemical Society. 130: 8602-3. PMID 18549206 DOI: 10.1021/Ja803139K  1
2008 Manning JR, Jefferson ER, Barton GJ. The contrasting properties of conservation and correlated phylogeny in protein functional residue prediction. Bmc Bioinformatics. 9: 51. PMID 18221517 DOI: 10.1186/1471-2105-9-51  1
2008 Davies HM, Manning JR. Catalytic C-H functionalization by metal carbenoid and nitrenoid insertion. Nature. 451: 417-24. PMID 18216847 DOI: 10.1038/Nature06485  1
2007 Manning JR, Davies HML. One-flask synthesis of methyl arylvinyldiazoacetates and their application in enantioselective C-H functionalization: Synthesis of (E)-methyl 2-diazo-4-phenylbut-3-enoate and (S,E)-methyl 2-((R)-4-methyl-1,2- dihydronaphthalen-2-YL)-4-phenylbut-3-enoate Organic Syntheses. 84: 334-346.  1
2006 Davies HM, Manning JR. C-H activation as a strategic reaction: enantioselective synthesis of 4-substituted indoles. Journal of the American Chemical Society. 128: 1060-1. PMID 16433506 DOI: 10.1021/Ja057768+  1
2006 Davies HML, Yang J, Manning JR. Direct synthesis of methyl 2-diazo-4-aryl-3-butenoates and their application to the enantioselective synthesis of 4-aryl-4-(1-naphthyl)-2-butenoates Tetrahedron Asymmetry. 17: 665-673. DOI: 10.1016/J.Tetasy.2006.01.023  1
1974 Manning JR, Griesemer RA. Spontaneous lymphoma of the nonhuman primate. Laboratory Animal Science. 24: 204-10. PMID 4360746  1
1881 ABT R, ALFORD RF, BERGERON C, FISHER G, FOX DM, GOTTSCHALK A, MACDOUGALL A, MANNING JR, MORANDIERE J, RIGGENBACH N, ROBINSON J, ROWAN AH, SMYTHE AJH, WATSON JWM, WILSON JC, et al. CORRESPONDENCE ON NEW ZEALAND AND CEYLON GOVERNMENT RAILWAYS. Minutes of the Proceedings of the Institution of Civil Engineers. 63: 120-148. DOI: 10.1680/imotp.1881.22139  0.01
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