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Marc A. Tollis, Ph.D. - Publications

Affiliations: 
2013 Biology City University of New York, New York, NY, United States 
Area:
General Biology, Evolution and Development Biology, Genetics
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31 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Gable SM, Bushroe N, Mendez J, Wilson A, Pinto B, Gamble T, Tollis M. Differential Conservation and Loss of CR1 Retrotransposons in Squamates Reveals Lineage-Specific Genome Dynamics across Reptiles. Biorxiv : the Preprint Server For Biology. PMID 38405926 DOI: 10.1101/2024.02.09.579686  0.818
2023 Nguyen ED, Fard VN, Kim BY, Collins S, Galey M, Nelson BR, Wakenight P, Gable SM, McKenna A, Bammler TK, MacDonald J, Okamura DM, Shendure J, Beier DR, Ramirez JM, ... ... Tollis M, et al. GENOME REPORT: Chromosome-scale genome assembly of the African spiny mouse (Acomys cahirinus). G3 (Bethesda, Md.). PMID 37552705 DOI: 10.1093/g3journal/jkad177  0.813
2023 Gable SM, Mendez JM, Bushroe NA, Wilson A, Byars MI, Tollis M. The State of Squamate Genomics: Past, Present, and Future of Genome Research in the Most Speciose Terrestrial Vertebrate Order. Genes. 14. PMID 37510292 DOI: 10.3390/genes14071387  0.827
2023 Compton Z, Harris V, Mellon W, Rupp S, Mallo D, Kapsetaki S, Wilmot M, Kennington R, Noble K, Baciu C, Ramirez L, Peraza A, Martins B, Sudhakar S, Aksoy S, ... ... Tollis M, et al. Cancer Prevalence Across Vertebrates. Research Square. PMID 37461608 DOI: 10.21203/rs.3.rs-3117313/v1  0.771
2023 Nguyen ED, Fard VN, Kim BY, Collins S, Galey M, Nelson BR, Wakenight P, Gable SM, McKenna A, Bammler TK, MacDonald J, Okamura DM, Shendure J, Beier DR, Ramirez JM, ... ... Tollis M, et al. GENOME REPORT: Chromosome-scale genome assembly of the African spiny mouse ( ). Biorxiv : the Preprint Server For Biology. PMID 37066261 DOI: 10.1101/2023.04.03.535372  0.813
2023 Compton Z, Harris V, Mellon W, Rupp S, Mallo D, Kapsetaki SE, Wilmot M, Kennington R, Noble K, Baciu C, Ramirez L, Peraza A, Martins B, Sudhakar S, Aksoy S, ... ... Tollis M, et al. Cancer Prevalence Across Vertebrates. Biorxiv : the Preprint Server For Biology. PMID 36824942 DOI: 10.1101/2023.02.15.527881  0.771
2023 Kapsetaki SE, Compton Z, Dolan J, Harris VK, Rupp SM, Duke EG, Harrison TM, Aksoy S, Giraudeau M, Vincze O, McGraw KJ, Aktipis A, Tollis M, Boddy AM, Maley CC. Life history and cancer in birds: clutch size predicts cancer. Biorxiv : the Preprint Server For Biology. PMID 36824773 DOI: 10.1101/2023.02.11.528100  0.76
2022 Geneva AJ, Park S, Bock DG, de Mello PLH, Sarigol F, Tollis M, Donihue CM, Reynolds RG, Feiner N, Rasys AM, Lauderdale JD, Minchey SG, Alcala AJ, Infante CR, Kolbe JJ, et al. Chromosome-scale genome assembly of the brown anole (Anolis sagrei), an emerging model species. Communications Biology. 5: 1126. PMID 36284162 DOI: 10.1038/s42003-022-04074-5  0.541
2022 Gable SM, Byars MI, Literman R, Tollis M. A Genomic Perspective on the Evolutionary Diversification of Turtles. Systematic Biology. PMID 35253878 DOI: 10.1093/sysbio/syac019  0.814
2021 Westfall AK, Telemeco RS, Grizante MB, Waits DS, Clark AD, Simpson DY, Klabacka RL, Sullivan AP, Perry GH, Sears MW, Cox CL, Cox RM, Gifford ME, John-Alder HB, Langkilde T, ... ... Tollis M, et al. A chromosome-level genome assembly for the eastern fence lizard (Sceloporus undulatus), a reptile model for physiological and evolutionary ecology. Gigascience. 10. PMID 34599334 DOI: 10.1093/gigascience/giab066  0.831
2021 Tollis M, Ferris E, Campbell MS, Harris VK, Rupp SM, Harrison TM, Kiso WK, Schmitt DL, Garner MM, Athena Aktipis C, Maley CC, Boddy AM, Yandell M, Gregg C, Schiffman JD, et al. Elephant Genomes Reveal Accelerated Evolution in Mechanisms Underlying Disease Defenses. Molecular Biology and Evolution. PMID 33944920 DOI: 10.1093/molbev/msab127  0.718
2020 Gemmell NJ, Rutherford K, Prost S, Tollis M, Winter D, Macey JR, Adelson DL, Suh A, Bertozzi T, Grau JH, Organ C, Gardner PP, Muffato M, Patricio M, Billis K, et al. Publisher Correction: The tuatara genome reveals ancient features of amniote evolution. Nature. PMID 32811988 DOI: 10.1038/S41586-020-2661-6  0.474
2020 Gemmell NJ, Rutherford K, Prost S, Tollis M, Winter D, Macey JR, Adelson DL, Suh A, Bertozzi T, Grau JH, Organ C, Gardner PP, Muffato M, Patricio M, Billis K, et al. The tuatara genome reveals ancient features of amniote evolution. Nature. PMID 32760000 DOI: 10.1038/S41586-020-2561-9  0.643
2020 Tollis M, Schneider-Utaka AK, Maley CC. The Evolution of Human Cancer Gene Duplications across Mammals. Molecular Biology and Evolution. PMID 32421773 DOI: 10.1093/Molbev/Msaa125  0.68
2019 Tollis M, Robbins J, Webb AE, Kuderna LFK, Caulin AF, Garcia JD, Bèrubè M, Pourmand N, Marques-Bonet T, O'Connell MJ, Palsbøll PJ, Maley CC. Return to the sea, get huge, beat cancer: an analysis of cetacean genomes including an assembly for the humpback whale (Megaptera novaeangliae). Molecular Biology and Evolution. PMID 31070747 DOI: 10.1093/Molbev/Msz099  0.761
2019 Schield DR, Card DC, Hales NR, Perry BW, Pasquesi GM, Blackmon H, Adams RH, Corbin AB, Smith CF, Ramesh B, Demuth JP, Betrán E, Tollis M, Meik JM, Mackessy SP, et al. The origins and evolution of chromosomes, dosage compensation, and mechanisms underlying venom regulation in snakes. Genome Research. PMID 30898880 DOI: 10.1101/Gr.240952.118  0.506
2018 Tollis M, Hutchins ED, Stapley J, Rupp SM, Eckalbar WL, Maayan I, Lasku E, Infante CR, Dennis SR, Robertson JA, May CM, Crusoe MR, Bermingham E, DeNardo DF, Hsieh ST, et al. Comparative Genomics Reveals Accelerated Evolution in Conserved Pathways during the Diversification of Anole Lizards. Genome Biology and Evolution. PMID 29360978 DOI: 10.1093/Gbe/Evy013  0.832
2017 Tollis M, Boddy AM, Maley CC. Peto's Paradox: how has evolution solved the problem of cancer prevention? Bmc Biology. 15: 60. PMID 28705195 DOI: 10.1186/S12915-017-0401-7  0.588
2017 Tollis M, DeNardo DF, Cornelius JA, Dolby GA, Edwards T, Henen BT, Karl AE, Murphy RW, Kusumi K. The Agassiz's desert tortoise genome provides a resource for the conservation of a threatened species. Plos One. 12: e0177708. PMID 28562605 DOI: 10.1371/Journal.Pone.0177708  0.835
2017 Tollis M, Schiffman JD, Boddy AM. Evolution of cancer suppression as revealed by mammalian comparative genomics. Current Opinion in Genetics & Development. 42: 40-47. PMID 28161621 DOI: 10.1016/J.Gde.2016.12.004  0.534
2016 Manthey JD, Tollis M, Lemmon AR, Moriarty Lemmon E, Boissinot S. Diversification in wild populations of the model organism Anolis carolinensis: A genome-wide phylogeographic investigation. Ecology and Evolution. 6: 8115-8125. PMID 27891220 DOI: 10.1002/Ece3.2547  0.735
2016 Chowell D, Boddy AM, Mallo D, Tollis M, Maley CC. When (distant) relatives stay too long: implications for cancer medicine. Genome Biology. 17: 34. PMID 26912072 DOI: 10.1186/S13059-016-0906-3  0.678
2016 Edwards T, Tollis M, Hsieh P, Gutenkunst RN, Liu Z, Kusumi K, Culver M, Murphy RW. Assessing models of speciation under different biogeographic scenarios; an empirical study using multi-locus and RNA-seq analyses. Ecology and Evolution. 6: 379-96. PMID 26843925 DOI: 10.1002/Ece3.1865  0.671
2014 Tollis M, Hutchins ED, Kusumi K. Reptile genomes open the frontier for comparative analysis of amniote development and regeneration. The International Journal of Developmental Biology. 58: 863-71. PMID 26154326 DOI: 10.1387/Ijdb.140316Kk  0.837
2014 Boissinot S, Alvarez L, Giraldo-Ramirez J, Tollis M. Neutral nuclear variation in Baboons (genus Papio) provides insights into their evolutionary and demographic histories. American Journal of Physical Anthropology. 155: 621-34. PMID 25234435 DOI: 10.1002/Ajpa.22618  0.677
2014 Tollis M, Boissinot S. Genetic variation in the green anole lizard (Anolis carolinensis) reveals island refugia and a fragmented Florida during the quaternary. Genetica. 142: 59-72. PMID 24379168 DOI: 10.1007/S10709-013-9754-1  0.657
2014 Freilich X, Tollis M, Boissinot S. Hiding in the highlands: evolution of a frog species complex of the genus Ptychadena in the Ethiopian highlands. Molecular Phylogenetics and Evolution. 71: 157-69. PMID 24315867 DOI: 10.1016/J.Ympev.2013.11.015  0.689
2013 Tollis M, Boissinot S. Lizards and LINEs: Selection and Demography Affect the Fate of L1 Retrotransposons in the Genome of the Green Anole (Anolis carolinensis). Genome Biology and Evolution. 5: 2019. PMID 27798071 DOI: 10.1093/gbe/evt167  0.657
2013 Tollis M, Boissinot S. Lizards and LINEs: selection and demography affect the fate of L1 retrotransposons in the genome of the green anole (Anolis carolinensis). Genome Biology and Evolution. 5: 1754-68. PMID 24013105 DOI: 10.1093/Gbe/Evt133  0.722
2012 Tollis M, Ausubel G, Ghimire D, Boissinot S. Multi-locus phylogeographic and population genetic analysis of Anolis carolinensis: historical demography of a genomic model species. Plos One. 7: e38474. PMID 22685573 DOI: 10.1371/Journal.Pone.0038474  0.734
2011 Tollis M, Boissinot S. The transposable element profile of the anolis genome: How a lizard can provide insights into the evolution of vertebrate genome size and structure. Mobile Genetic Elements. 1: 107-111. PMID 22016857 DOI: 10.4161/Mge.1.2.17733  0.78
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