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Toru Takumi - Publications

Affiliations: 
Mental Biology RIKEN Brain Science Institute, Wakō-shi, Saitama-ken, Japan 
Area:
Circadian rhythms
Website:
http://www.brain.riken.jp/en/faculty/details/79

65 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Qian K, Koike T, Tamada K, Takumi T, Schuller BW, Yamamoto Y. Sensing the Sounds of Silence: A Pilot Study on the Detection of Model Mice of Autism Spectrum Disorder from Ultrasonic Vocalisations. Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual International Conference. 2021: 68-71. PMID 34891241 DOI: 10.1109/EMBC46164.2021.9630793  0.432
2021 Tamada K, Fukumoto K, Toya T, Nakai N, Awasthi JR, Tanaka S, Okabe S, Spitz F, Saitow F, Suzuki H, Takumi T. Genetic dissection identifies Necdin as a driver gene in a mouse model of paternal 15q duplications. Nature Communications. 12: 4056. PMID 34210967 DOI: 10.1038/s41467-021-24359-3  0.415
2021 Tsurugizawa T, Tamada K, Debacker C, Zalesky A, Takumi T. Cranioplastic Surgery and Acclimation Training for Awake Mouse fMRI. Bio-Protocol. 11: e3972. PMID 33889666 DOI: 10.21769/BioProtoc.3972  0.415
2020 Awasthi JR, Tamada K, Overton ETN, Takumi T. Development of serotonergic projections to the suprachiasmatic nucleus in the mouse brain. Neuroscience Letters. 739: 135438. PMID 33132178 DOI: 10.1016/j.neulet.2020.135438  0.415
2020 Miura I, Sato M, Overton ETN, Kunori N, Nakai J, Kawamata T, Nakai N, Takumi T. Encoding of social exploration by neural ensembles in the insular cortex. Plos Biology. 18: e3000584. PMID 32956387 DOI: 10.1371/journal.pbio.3000584  0.476
2020 Awasthi JR, Tamada K, Overton ETN, Takumi T. Comprehensive Topographical Map of the Serotonergic Fibers in the Male Mouse Brain. The Journal of Comparative Neurology. PMID 32892368 DOI: 10.1002/Cne.25027  0.481
2020 Miura I, Overton ETN, Nakai N, Kawamata T, Sato M, Takumi T. Imaging the Neural Circuit Basis of Social Behavior: Insights from Mouse and Human Studies. Neurologia Medico-Chirurgica. PMID 32863321 DOI: 10.2176/nmc.ra.2020-0088  0.49
2020 Tsurugizawa T, Tamada K, Ono N, Karakawa S, Kodama Y, Debacker C, Hata J, Okano H, Kitamura A, Zalesky A, Takumi T. Awake functional MRI detects neural circuit dysfunction in a mouse model of autism. Science Advances. 6: eaav4520. PMID 32076634 DOI: 10.1126/Sciadv.Aav4520  0.481
2019 Eurike Septyaningtrias D, Lin CW, Ouchida R, Nakai N, Suda W, Hattori M, Morita H, Honda K, Tamada K, Takumi T. Altered microbiota composition reflects enhanced communication in 15q11-13 CNV mice. Neuroscience Research. PMID 31863791 DOI: 10.1016/J.Neures.2019.12.010  0.481
2019 Myung J, Schmal C, Hong S, Tsukizawa Y, Rose P, Zhang Y, Holtzman MJ, De Schutter E, Herzel H, Bordyugov G, Takumi T. Author Correction: The choroid plexus is an important circadian clock component. Nature Communications. 10: 5253. PMID 31748545 DOI: 10.1038/S41467-019-13101-9  0.532
2019 Nishino T, Tamada K, Maeda A, Abe T, Kiyonari H, Funahashi Y, Kaibuchi K, Takumi T, Konishi H. Behavioral analysis in mice deficient for GAREM2 (Grb2-associated regulator of Erk/MAPK subtype2) that is a subtype of highly expressing in the brain. Molecular Brain. 12: 94. PMID 31718706 DOI: 10.1186/S13041-019-0512-X  0.481
2019 Wang J, Lou SS, Wang T, Wu RJ, Li G, Zhao M, Lu B, Li YY, Zhang J, Cheng X, Shen Y, Wang X, Zhu ZC, Li MJ, Takumi T, et al. UBE3A-mediated PTPA ubiquitination and degradation regulate PP2A activity and dendritic spine morphology. Proceedings of the National Academy of Sciences of the United States of America. PMID 31160454 DOI: 10.1073/Pnas.1820131116  0.314
2019 Nakanishi M, Anderson MP, Takumi T. Recent genetic and functional insights in autism spectrum disorder. Current Opinion in Neurology. PMID 31135459 DOI: 10.1097/Wco.0000000000000718  0.306
2019 Takumi T, Tamada K, Hatanaka F, Nakai N, Bolton PF. Behavioral neuroscience of autism. Neuroscience and Biobehavioral Reviews. PMID 31059731 DOI: 10.1016/J.Neubiorev.2019.04.012  0.523
2019 Mori K, Tamada K, Kurooka H, Matsui M, Takumi T, Yokota Y. Gene expression profile data of the developing small intestine of -deficient mice. Data in Brief. 24: 103717. PMID 30984807 DOI: 10.1016/J.Dib.2019.103717  0.481
2019 Furumai R, Tamada K, Liu X, Takumi T. UBE3A regulates the transcription of IRF, an anti-viral immunity. Human Molecular Genetics. PMID 30690483 DOI: 10.1093/Hmg/Ddz019  0.481
2018 Nakai N, Takumi T, Nakai J, Sato M. Common Defects of Spine Dynamics and Circuit Function in Neurodevelopmental Disorders: A Systematic Review of Findings From Optical Imaging of Mouse Models. Frontiers in Neuroscience. 12: 412. PMID 29970983 DOI: 10.3389/fnins.2018.00412  0.504
2018 Horder J, Petrinovic MM, Mendez MA, Bruns A, Takumi T, Spooren W, Barker GJ, Künnecke B, Murphy DG. Glutamate and GABA in autism spectrum disorder-a translational magnetic resonance spectroscopy study in man and rodent models. Translational Psychiatry. 8: 106. PMID 29802263 DOI: 10.1038/S41398-018-0155-1  0.305
2018 Myung J, Schmal C, Hong S, Tsukizawa Y, Rose P, Zhang Y, Holtzman MJ, De Schutter E, Herzel H, Bordyugov G, Takumi T. The choroid plexus is an important circadian clock component. Nature Communications. 9: 1062. PMID 29540683 DOI: 10.1038/S41467-018-03507-2  0.573
2018 Mori K, Nakamura H, Kurooka H, Miyachi H, Tamada K, Sugai M, Takumi T, Yokota Y. Id2 determines intestinal identity through repression of the foregut transcription factor, Irx5. Molecular and Cellular Biology. PMID 29463648 DOI: 10.1128/Mcb.00250-17  0.481
2018 Takumi T, Tamada K. CNV biology in neurodevelopmental disorders. Current Opinion in Neurobiology. 48: 183-192. PMID 29331932 DOI: 10.1016/J.Conb.2017.12.004  0.481
2017 Fukumoto K, Tamada K, Toya T, Nishino T, Yanagawa Y, Takumi T. Identification of genes regulating GABAergic interneuron maturation. Neuroscience Research. PMID 29203264 DOI: 10.1016/J.Neures.2017.11.010  0.504
2017 Nakanishi M, Nomura J, Ji X, Tamada K, Arai T, Takahashi E, Bućan M, Takumi T. Correction: Functional significance of rare neuroligin 1 variants found in autism. Plos Genetics. 13: e1007035. PMID 28972980 DOI: 10.1371/Journal.Pgen.1007035  0.462
2017 Nakanishi M, Nomura J, Ji X, Tamada K, Arai T, Takahashi E, Bućan M, Takumi T. Functional significance of rare neuroligin 1 variants found in autism. Plos Genetics. 13: e1006940. PMID 28841651 DOI: 10.1371/Journal.Pgen.1006940  0.519
2017 Nakai N, Nagano M, Saitow F, Watanabe Y, Kawamura Y, Kawamoto A, Tamada K, Mizuma H, Onoe H, Watanabe Y, Monai H, Hirase H, Nakatani J, Inagaki H, Kawada T, ... ... Takumi T, et al. Serotonin rebalances cortical tuning and behavior linked to autism symptoms in 15q11-13 CNV mice. Science Advances. 3: e1603001. PMID 28691086 DOI: 10.1126/Sciadv.1603001  0.511
2017 Kishimoto K, Nomura J, Ellegood J, Fukumoto K, Lerch JP, Moreno-De-Luca D, Bourgeron T, Tamada K, Takumi T. Behavioral and neuroanatomical analyses in a genetic mouse model of 2q13 duplication. Genes to Cells : Devoted to Molecular & Cellular Mechanisms. PMID 28370817 DOI: 10.1111/Gtc.12487  0.505
2017 Nomura J, Kannan G, Takumi T. Rodent models of Genetic and Chromosomal Variations in Psychiatric disorders. Psychiatry and Clinical Neurosciences. PMID 28317218 DOI: 10.1111/pcn.12524  0.308
2017 Wang M, Li H, Takumi T, Qiu Z, Xu X, Yu X, Bian WJ. Distinct Defects in Spine Formation or Pruning in Two Gene Duplication Mouse Models of Autism. Neuroscience Bulletin. PMID 28258509 DOI: 10.1007/S12264-017-0111-8  0.334
2017 Nishita M, Park SY, Nishio T, Kamizaki K, Wang Z, Tamada K, Takumi T, Hashimoto R, Otani H, Pazour GJ, Hsu VW, Minami Y. Ror2 signaling regulates Golgi structure and transport through IFT20 for tumor invasiveness. Scientific Reports. 7: 1. PMID 28127051 DOI: 10.1038/S41598-016-0028-X  0.465
2017 Azzi A, Evans JA, Leise T, Myung J, Takumi T, Davidson AJ, Brown SA. Network Dynamics Mediate Circadian Clock Plasticity. Neuron. PMID 28065650 DOI: 10.1016/J.Neuron.2016.12.022  0.558
2016 Katayama Y, Nishiyama M, Shoji H, Ohkawa Y, Kawamura A, Sato T, Suyama M, Takumi T, Miyakawa T, Nakayama KI. CHD8 haploinsufficiency results in autistic-like phenotypes in mice. Nature. PMID 27602517 DOI: 10.1038/Nature19357  0.337
2015 Liu X, Tamada K, Kishimoto R, Okubo H, Ise S, Ohta H, Ruf S, Nakatani J, Kohno N, Spitz F, Takumi T. Transcriptome profiling of white adipose tissue in a mouse model for 15q duplication syndrome. Genomics Data. 5: 394-6. PMID 26484295 DOI: 10.1016/J.Gdata.2015.06.035  0.481
2015 Hughes AT, Croft CL, Samuels RE, Myung J, Takumi T, Piggins HD. Constant light enhances synchrony among circadian clock cells and promotes behavioral rhythms in VPAC2-signaling deficient mice. Scientific Reports. 5: 14044. PMID 26370467 DOI: 10.1038/Srep14044  0.572
2015 Nakai N, Otsuka S, Myung J, Takumi T. Autism spectrum disorder model mice: Focus on copy number variation and epigenetics. Science China. Life Sciences. 58: 976-84. PMID 26335737 DOI: 10.1007/S11427-015-4891-7  0.558
2015 Tanoue S, Fujimoto K, Myung J, Hatanaka F, Kato Y, Takumi T. DEC2-E4BP4 Heterodimer Represses the Transcriptional Enhancer Activity of the EE Element in the Per2 Promoter. Frontiers in Neurology. 6: 166. PMID 26257703 DOI: 10.3389/Fneur.2015.00166  0.556
2015 DeWoskin D, Myung J, Belle MD, Piggins HD, Takumi T, Forger DB. Distinct roles for GABA across multiple timescales in mammalian circadian timekeeping. Proceedings of the National Academy of Sciences of the United States of America. 112: E3911-9. PMID 26130805 DOI: 10.1073/Pnas.1420753112  0.544
2015 Myung J, Hong S, DeWoskin D, De Schutter E, Forger DB, Takumi T. GABA-mediated repulsive coupling between circadian clock neurons in the SCN encodes seasonal time. Proceedings of the National Academy of Sciences of the United States of America. PMID 26130804 DOI: 10.1073/Pnas.1421200112  0.556
2015 Kishimoto R, Tamada K, Liu X, Okubo H, Ise S, Ohta H, Ruf S, Nakatani J, Kohno N, Spitz F, Takumi T. Model mice for 15q11-13 duplication syndrome exhibit late-onset obesity and altered lipid metabolism. Human Molecular Genetics. PMID 26002101 DOI: 10.1093/Hmg/Ddv187  0.481
2015 Ellegood J, Nakai N, Nakatani J, Henkelman M, Takumi T, Lerch J. Neuroanatomical Phenotypes Are Consistent With Autism-Like Behavioral Phenotypes in the 15q11-13 Duplication Mouse Model. Autism Research : Official Journal of the International Society For Autism Research. PMID 25755142 DOI: 10.1002/Aur.1469  0.303
2015 Tamada K, Takumi T. Serotonin disturbance in mouse models of autism spectrum disorders Neuromethods. 100: 239-262. DOI: 10.1007/978-1-4939-2250-5_9  0.415
2014 Isshiki M, Tanaka S, Kuriu T, Tabuchi K, Takumi T, Okabe S. Enhanced synapse remodelling as a common phenotype in mouse models of autism. Nature Communications. 5: 4742. PMID 25144834 DOI: 10.1038/Ncomms5742  0.306
2014 Goriki A, Hatanaka F, Myung J, Kim JK, Yoritaka T, Tanoue S, Abe T, Kiyonari H, Fujimoto K, Kato Y, Todo T, Matsubara A, Forger D, Takumi T. A novel protein, CHRONO, functions as a core component of the mammalian circadian clock. Plos Biology. 12: e1001839. PMID 24736997 DOI: 10.1371/Journal.Pbio.1001839  0.583
2013 Nakamura T, Takumi T, Takano A, Hatanaka F, Yamamoto Y. Characterization and modeling of intermittent locomotor dynamics in clock gene-deficient mice. Plos One. 8: e58884. PMID 23516567 DOI: 10.1371/Journal.Pone.0058884  0.318
2012 Farook MF, DeCuypere M, Hyland K, Takumi T, LeDoux MS, Reiter LT. Altered serotonin, dopamine and norepinepherine levels in 15q duplication and Angelman syndrome mouse models. Plos One. 7: e43030. PMID 22916201 DOI: 10.1371/Journal.Pone.0043030  0.303
2012 Nomura J, Takumi T. Animal models of psychiatric disorders that reflect human copy number variation. Neural Plasticity. 2012: 589524. PMID 22900207 DOI: 10.1155/2012/589524  0.301
2012 Myung J, Hong S, Hatanaka F, Nakajima Y, De Schutter E, Takumi T. Period coding of Bmal1 oscillators in the suprachiasmatic nucleus. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 32: 8900-18. PMID 22745491 DOI: 10.1523/Jneurosci.5586-11.2012  0.552
2011 Tamada K, Nakai N, Takumi T. [Humanized mouse model of autism]. Seikagaku. the Journal of Japanese Biochemical Society. 83: 841-5. PMID 22111376  0.415
2011 Kim W, Matsui T, Yamao M, Ishibashi M, Tamada K, Takumi T, Kohno K, Oba S, Ishii S, Sakumura Y, Bessho Y. The period of the somite segmentation clock is sensitive to Notch activity. Molecular Biology of the Cell. 22: 3541-9. PMID 21795391 DOI: 10.1091/Mbc.E11-02-0139  0.496
2011 Tamada K, Tomonaga S, Hatanaka F, Nakai N, Takumi T. Analysis of chromosome engineered mouse model of 15q duplication Neuroscience Research. 71: e75-e76. DOI: 10.1016/J.Neures.2011.07.322  0.481
2010 Tamada K, Tomonaga S, Hatanaka F, Nakai N, Takao K, Miyakawa T, Nakatani J, Takumi T. Decreased exploratory activity in a mouse model of 15q duplication syndrome; implications for disturbance of serotonin signaling. Plos One. 5: e15126. PMID 21179543 DOI: 10.1371/Journal.Pone.0015126  0.481
2010 Hatanaka F, Matsubara C, Myung J, Yoritaka T, Kamimura N, Tsutsumi S, Kanai A, Suzuki Y, Sassone-Corsi P, Aburatani H, Sugano S, Takumi T. Genome-wide profiling of the core clock protein BMAL1 targets reveals a strict relationship with metabolism. Molecular and Cellular Biology. 30: 5636-48. PMID 20937769 DOI: 10.1128/Mcb.00781-10  0.564
2009 Nakatani J, Tamada K, Hatanaka F, Ise S, Ohta H, Inoue K, Tomonaga S, Watanabe Y, Chung YJ, Banerjee R, Iwamoto K, Kato T, Okazawa M, Yamauchi K, Tanda K, ... ... Takumi T, et al. Abnormal behavior in a chromosome-engineered mouse model for human 15q11-13 duplication seen in autism. Cell. 137: 1235-46. PMID 19563756 DOI: 10.1016/J.Cell.2009.04.024  0.5
2009 Enomoto M, Hayakawa S, Itsukushima S, Ren DY, Matsuo M, Tamada K, Oneyama C, Okada M, Takumi T, Nishita M, Minami Y. Autonomous regulation of osteosarcoma cell invasiveness by Wnt5a/Ror2 signaling. Oncogene. 28: 3197-208. PMID 19561643 DOI: 10.1038/onc.2009.175  0.481
2008 Nakamura T, Takumi T, Takano A, Aoyagi N, Yoshiuchi K, Struzik ZR, Yamamoto Y. Of mice and men--universality and breakdown of behavioral organization. Plos One. 3: e2050. PMID 18446212 DOI: 10.1371/Journal.Pone.0002050  0.301
2008 Nakamura W, Yamazaki S, Nakamura TJ, Shirakawa T, Block GD, Takumi T. In vivo monitoring of circadian timing in freely moving mice. Current Biology : Cb. 18: 381-5. PMID 18334203 DOI: 10.1016/J.Cub.2008.02.024  0.329
2002 Shigeyoshi Y, Meyer-Bernstein E, Yagita K, Fu W, Chen Y, Takumi T, Schotland P, Sehgal A, Okamura H. Restoration of circadian behavioural rhythms in a period null Drosophila mutant (per01) by mammalian period homologues mPer1 and mPer2. Genes to Cells : Devoted to Molecular & Cellular Mechanisms. 7: 163-71. PMID 11895480 DOI: 10.1046/J.1356-9597.2001.00503.X  0.337
1998 Takumi T, Taguchi K, Miyake S, Sakakida Y, Takashima N, Matsubara C, Maebayashi Y, Okumura K, Takekida S, Yamamoto S, Yagita K, Yan L, Young MW, Okamura H. A light-independent oscillatory gene mPer3 in mouse SCN and OVLT. The Embo Journal. 17: 4753-9. PMID 9707434 DOI: 10.1093/emboj/17.16.4753  0.322
1995 Busch AE, Waldegger S, Herzer T, Raber G, Gulbins E, Takumi T, Moriyoshi K, Nakanishi S, Lang F. Molecular basis of IsK protein regulation by oxidation or chelation. The Journal of Biological Chemistry. 270: 3638-41. PMID 7876101 DOI: 10.1074/Jbc.270.8.3638  0.489
1995 Takumi T, Ishii T, Horio Y, Morishige K, Takahashi N, Yamada M, Yamashita T, Kiyama H, Sohmiya K, Nakanishi S. A novel ATP-dependent inward rectifier potassium channel expressed predominantly in glial cells. The Journal of Biological Chemistry. 270: 16339-46. PMID 7608203 DOI: 10.1074/Jbc.270.27.16339  0.488
1993 Oiki S, Takumi T, Okada Y, Nakanishi S. Alterations of gating parameters by neutral substitutions of transmembrane Leu52 of slow potassium channel. Annals of the New York Academy of Sciences. 707: 402-6. PMID 9137580 DOI: 10.1111/J.1749-6632.1993.Tb38082.X  0.475
1991 Sakagami M, Fukazawa K, Matsunaga T, Fujita H, Mori N, Takumi T, Ohkubo H, Nakanishi S. Cellular localization of rat Isk protein in the stria vascularis by immunohistochemical observation. Hearing Research. 56: 168-72. PMID 1663105 DOI: 10.1016/0378-5955(91)90166-7  0.486
1990 Nakanishi S, Ohkubo H, Kakizuka A, Yokota Y, Shigemoto R, Sasai Y, Takumi T. Molecular characterization of mammalian tachykinin receptors and a possible epithelial potassium channel. Recent Progress in Hormone Research. 46: 59-83; discussion 83. PMID 2177908 DOI: 10.1016/B978-0-12-571146-3.50007-9  0.471
1990 Sugimoto T, Tanabe Y, Shigemoto R, Iwai M, Takumi T, Ohkubo H, Nakanishi S. Immunohistochemical study of a rat membrane protein which induces a selective potassium permeation: its localization in the apical membrane portion of epithelial cells. The Journal of Membrane Biology. 113: 39-47. PMID 2154581 DOI: 10.1007/BF01869604  0.466
1989 Murai T, Kakizuka A, Takumi T, Ohkubo H, Nakanishi S. Molecular cloning and sequence analysis of human genomic DNA encoding a novel membrane protein which exhibits a slowly activating potassium channel activity. Biochemical and Biophysical Research Communications. 161: 176-81. PMID 2730656 DOI: 10.1016/0006-291X(89)91577-5  0.491
1988 Takumi T, Ohkubo H, Nakanishi S. Cloning of a membrane protein that induces a slow voltage-gated potassium current. Science (New York, N.Y.). 242: 1042-5. PMID 3194754 DOI: 10.1126/Science.3194754  0.493
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