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Damon P. Little, Ph.D. - Publications

Affiliations: 
Cullman Program for Molecular Systematics New York Botanical Garden 
Area:
plant systematics, phylogenetics, bioinformatics, gymnosperms, conifers
Website:
http://www.nybg.org/science/scientist_profile.php?id_scientist=29
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38 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Stevenson DW, Ramakrishnan S, Alves CS, Coelho LA, Kramer M, Goodwin S, Ramos OM, Eshel G, Sondervan VM, Frangos S, Zumajo-Cardona C, Jenike K, Ou S, Wang X, Lee YP, ... ... Little DP, et al. The genome of the Wollemi pine, a critically endangered "living fossil" unchanged since the Cretaceous, reveals extensive ancient transposon activity. Biorxiv : the Preprint Server For Biology. PMID 37662366 DOI: 10.1101/2023.08.24.554647  0.597
2021 Diaz-Silveira GL, Deutsch J, Little DP. DNA Barcode Authentication of Devil's Claw Herbal Dietary Supplements. Plants (Basel, Switzerland). 10. PMID 34685813 DOI: 10.3390/plants10102005  0.325
2020 Little DP, Tulig M, Tan KC, Liu Y, Belongie S, Kaeser-Chen C, Michelangeli FA, Panesar K, Guha RV, Ambrose BA. An algorithm competition for automatic species identification from herbarium specimens. Applications in Plant Sciences. 8: e11365. PMID 32626608 DOI: 10.1002/Aps3.11365  0.402
2019 Peng H, Meyer RS, Yang T, Whitaker BD, Trouth F, Shangguan L, Huang J, Litt A, Little DP, Ke H, Jurick WM. A novel hydroxycinnamoyl transferase for synthesis of hydroxycinnamoyl spermine conjugates in plants. Bmc Plant Biology. 19: 261. PMID 31208339 DOI: 10.1186/S12870-019-1846-3  0.339
2018 Forest F, Moat J, Baloch E, Brummitt NA, Bachman SP, Ickert-Bond S, Hollingsworth PM, Liston A, Little DP, Mathews S, Rai H, Rydin C, Stevenson DW, Thomas P, Buerki S. Gymnosperms on the EDGE. Scientific Reports. 8: 6053. PMID 29662101 DOI: 10.1038/S41598-018-24365-4  0.44
2018 Hernández-León S, Little DP, Acevedo-Sandoval O, Gernandt DS, Rodríguez-Laguna R, Saucedo-García M, Arce-Cervantes O, Razo-Zárate R, Espitia-López J. Plant core DNA barcode performance at a local scale: identification of the conifers of the state of Hidalgo, Mexico Systematics and Biodiversity. 16: 791-806. DOI: 10.1080/14772000.2018.1546240  0.498
2016 Clugston JAR, Griffith MP, Kenicer GJ, Husby CE, Calonje MA, Stevenson DW, Little DP. ZAMIA (ZAMIACEAE) PHENOLOGY IN A PHYLOGENETIC CONTEXT: DOES IN SITU REPRODUCTIVE TIMING CORRELATE WITH ANCESTRY? Edinburgh Journal of Botany. 1-26. DOI: 10.1017/S096042861600007X  0.397
2015 Meyer RS, Whitaker BD, Little DP, Wu SB, Kennelly EJ, Long CL, Litt A. Parallel reductions in phenolic constituents resulting from the domestication of eggplant. Phytochemistry. 115: 194-206. PMID 25813879 DOI: 10.1016/J.Phytochem.2015.02.006  0.379
2014 Salinas NR, Little DP. 2matrix: A utility for indel coding and phylogenetic matrix concatenation(1.). Applications in Plant Sciences. 2. PMID 25202595 DOI: 10.3732/Apps.1300083  0.308
2014 Little DP. A DNA mini-barcode for land plants. Molecular Ecology Resources. 14: 437-46. PMID 24286499 DOI: 10.1111/1755-0998.12194  0.408
2013 Little DP, Jeanson ML. DNA barcode authentication of saw palmetto herbal dietary supplements. Scientific Reports. 3: 3518. PMID 24343362 DOI: 10.1038/Srep03518  0.307
2013 Little DP, Knopf P, Schulz C. DNA barcode identification of Podocarpaceae--the second largest conifer family. Plos One. 8: e81008. PMID 24312258 DOI: 10.1371/Journal.Pone.0081008  0.44
2012 Knopf P, Schulz C, Little DP, Stützel T, Stevenson DW. Relationships within Podocarpaceae based on DNA sequence, anatomical, morphological, and biogeographical data. Cladistics : the International Journal of the Willi Hennig Society. 28: 271-299. PMID 34872191 DOI: 10.1111/j.1096-0031.2011.00381.x  0.376
2012 Salinas NR, Little DP. Electric LAMP: Virtual Loop-Mediated Isothermal AMPlification. Isrn Bioinformatics. 2012: 696758. PMID 25969751 DOI: 10.5402/2012/696758  0.365
2012 Baker DA, Stevenson DW, Little DP. DNA barcode identification of black cohosh herbal dietary supplements. Journal of Aoac International. 95: 1023-34. PMID 22970567 DOI: 10.5740/Jaoacint.11-261  0.439
2012 Meyer RS, Karol KG, Little DP, Nee MH, Litt A. Phylogeographic relationships among Asian eggplants and new perspectives on eggplant domestication. Molecular Phylogenetics and Evolution. 63: 685-701. PMID 22387533 DOI: 10.1016/J.Ympev.2012.02.006  0.367
2012 Knopf P, Schulz C, Little DP, Stützel T, Stevenson DW. Relationships within Podocarpaceae based on DNA sequence, anatomical, morphological, and biogeographical data Cladistics. 28: 271-299. DOI: 10.1111/J.1096-0031.2011.00381.X  0.462
2011 Stoeckle MY, Gamble CC, Kirpekar R, Young G, Ahmed S, Little DP. Commercial teas highlight plant DNA barcode identification successes and obstacles. Scientific Reports. 1: 42. PMID 22355561 DOI: 10.1038/Srep00042  0.466
2011 Lee EK, Cibrian-Jaramillo A, Kolokotronis SO, Katari MS, Stamatakis A, Ott M, Chiu JC, Little DP, Stevenson DW, McCombie WR, Martienssen RA, Coruzzi G, Desalle R. A functional phylogenomic view of the seed plants. Plos Genetics. 7: e1002411. PMID 22194700 DOI: 10.1371/Journal.Pgen.1002411  0.608
2011 Nagalingum NS, Marshall CR, Quental TB, Rai HS, Little DP, Mathews S. Recent synchronous radiation of a living fossil. Science (New York, N.Y.). 334: 796-9. PMID 22021670 DOI: 10.1126/Science.1209926  0.434
2011 Little DP. DNA barcode sequence identification incorporating taxonomic hierarchy and within taxon variability. Plos One. 6: e20552. PMID 21857897 DOI: 10.1371/Journal.Pone.0020552  0.362
2011 Jeanson ML, Labat JN, Little DP. DNA barcoding: a new tool for palm taxonomists? Annals of Botany. 108: 1445-51. PMID 21757475 DOI: 10.1093/Aob/Mcr158  0.45
2011 Hollingsworth PM, Graham SW, Little DP. Choosing and using a plant DNA barcode. Plos One. 6: e19254. PMID 21637336 DOI: 10.1371/Journal.Pone.0019254  0.404
2010 Little DP. A unified index of sequence quality and contig overlap for DNA barcoding. Bioinformatics (Oxford, England). 26: 2780-1. PMID 20837570 DOI: 10.1093/Bioinformatics/Btq507  0.325
2010 Cibrián-Jaramillo A, De la Torre-Bárcena JE, Lee EK, Katari MS, Little DP, Stevenson DW, Martienssen R, Coruzzi GM, DeSalle R. Using phylogenomic patterns and gene ontology to identify proteins of importance in plant evolution. Genome Biology and Evolution. 2: 225-39. PMID 20624728 DOI: 10.1093/Gbe/Evq012  0.413
2010 Schulz C, Little DP, Stevenson DW, Nowogrodzki A, Paquiot D. Growth and care instructions of a new model species-the lycophyte Selaginella apoda American Fern Journal. 100: 167-171. DOI: 10.1640/0002-8444-100.3.167  0.348
2010 Schulz C, Little DP, Stevenson DW, Bauer D, Moloney C, Stützel T. An overview of the morphology, anatomy, and life cycle of a new model species: The lycophyte selaginella apoda (L.) spring International Journal of Plant Sciences. 171: 693-712. DOI: 10.1086/654902  0.367
2009 Hollingsworth PM, Forrest LL, Spouge JL, Hajibabaei M, Ratnasingham S, van der Bank M, Chase MW, Cowan RS, Erickson DL, Fazekas AJ, Graham SW, James KE, Kim KJ, John Kress W, Schneider H, ... ... Little DP, et al. A DNA barcode for land plants Proceedings of the National Academy of Sciences of the United States of America. 106: 12794-12797. PMID 19666622 DOI: 10.1073/Pnas.0905845106  0.483
2008 Martin CV, Little DP, Goldenberg R, Michelangeli FA. A phylogenetic evaluation of Leandra (Miconieae, Melastomataceae): A polyphyletic genus where the seeds tell the story, not the petals Cladistics. 24: 315-327. DOI: 10.1111/J.1096-0031.2007.00185.X  0.451
2007 Little DP, Stevenson DW. A comparison of algorithms for the identification of specimens using DNA barcodes: examples from gymnosperms. Cladistics : the International Journal of the Willi Hennig Society. 23: 1-21. PMID 34905841 DOI: 10.1111/j.1096-0031.2006.00126.x  0.307
2007 Sass C, Little DP, Stevenson DW, Specht CD. DNA barcoding in the cycadales: testing the potential of proposed barcoding markers for species identification of cycads. Plos One. 2: e1154. PMID 17987130 DOI: 10.1371/Journal.Pone.0001154  0.498
2007 Hall GS, Little DP. Relative quantitation of virus population size in mixed genotype infections using sequencing chromatograms. Journal of Virological Methods. 146: 22-8. PMID 17640742 DOI: 10.1016/J.Jviromet.2007.05.029  0.386
2007 Little DP, Stevenson DW. A comparison of algorithms for the identification of specimens using DNA barcodes: Examples from gymnosperms Cladistics. 23: 1-21. DOI: 10.1111/J.1096-0031.2006.00126.X  0.405
2006 Little DP. Evolution and circumscription of the true cypresses (Cupressaceae: Cupressus) Systematic Botany. 31: 461-480. DOI: 10.1043/05-33.1  0.442
2004 Little DP, Schwarzbach AE, Adams RP, Hsieh CF. The circumscription and phylogenetic relationships of Callitropsis and the newly described genus Xanthocyparis (Cupressaceae). American Journal of Botany. 91: 1872-81. PMID 21652334 DOI: 10.3732/Ajb.91.11.1872  0.435
2004 Little DP. Documentation of hybridization between Californian cypresses: Cupressus macnabiana x sargentii Systematic Botany. 29: 825-833. DOI: 10.1600/0363644042451026  0.332
2003 Little DP, Barrington DS. Major evolutionary events in the origin and diversification of the fern genus Polystichum (Dryopteridaceae). American Journal of Botany. 90: 508-14. PMID 21659143 DOI: 10.3732/Ajb.90.3.508  0.415
2003 Tehler A, Little DP, Farris JS. The full-length phylogenetic tree from 1551 ribosomal sequences of chitinous fungi, Fungi. Mycological Research. 107: 901-16. PMID 14531615 DOI: 10.1017/S0953756203008128  0.386
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