| Year |
Citation |
Score |
| 2020 |
Cheng M, Asuru A, Kiselar J, Mathai G, Chance MR, Gross ML. Fast Protein Footprinting by X-ray Mediated Radical Trifluoromethylation. Journal of the American Society For Mass Spectrometry. PMID 32255631 DOI: 10.1021/Jasms.0C00085 |
0.329 |
|
| 2020 |
Gao X, Li L, Parisien M, Wu J, Bederman I, Gao Z, Krokowski D, Chirieleison SM, Abbott DW, Wang B, Arvan P, Cameron M, Chance M, Willard BB, Hatzoglou M. Discovery of a redox thiol switch: implications for cellular energy metabolism. Molecular & Cellular Proteomics : McP. PMID 32132231 DOI: 10.1074/Mcp.Ra119.001910 |
0.316 |
|
| 2020 |
Chance MR, Farquhar ER, Yang S, Lodowski D, Kiselar J. Protein Footprinting: Auxiliary Engine to Power the Structural Biology Revolution. Journal of Molecular Biology. PMID 32088185 DOI: 10.1016/J.Jmb.2020.02.011 |
0.416 |
|
| 2019 |
Du Y, Duc NM, Rasmussen SGF, Hilger D, Kubiak X, Wang L, Bohon J, Kim HR, Wegrecki M, Asuru A, Jeong KM, Lee J, Chance MR, Lodowski DT, Kobilka BK, et al. Assembly of a GPCR-G Protein Complex. Cell. PMID 31080064 DOI: 10.1016/J.Cell.2019.04.022 |
0.344 |
|
| 2018 |
Peng Y, Cao S, Kiselar J, Xiao X, Du Z, Hsieh A, Ko S, Chen Y, Agrawal P, Zheng W, Shi W, Jiang W, Yang L, Chance MR, Surewicz WK, et al. A Metastable Contact and Structural Disorder in the Estrogen Receptor Transactivation Domain. Structure (London, England : 1993). PMID 30581045 DOI: 10.1016/J.Str.2018.10.026 |
0.341 |
|
| 2018 |
Huang W, Peng Y, Kiselar J, Zhao X, Albaqami A, Mendez D, Chen Y, Chakravarthy S, Gupta S, Ralston C, Kao HY, Chance MR, Yang S. Multidomain architecture of estrogen receptor reveals interfacial cross-talk between its DNA-binding and ligand-binding domains. Nature Communications. 9: 3520. PMID 30166540 DOI: 10.1038/S41467-018-06034-2 |
0.322 |
|
| 2018 |
Kiselar J, Chance MR. High-Resolution Hydroxyl Radical Protein Footprinting: Biophysics Tool for Drug Discovery. Annual Review of Biophysics. PMID 29539273 DOI: 10.1146/Annurev-Biophys-070317-033123 |
0.367 |
|
| 2017 |
Hsieh A, Lu L, Chance MR, Yang S. A Practical Guide to iSPOT Modeling: An Integrative Structural Biology Platform. Advances in Experimental Medicine and Biology. 1009: 229-238. PMID 29218563 DOI: 10.1007/978-981-10-6038-0_14 |
0.367 |
|
| 2017 |
Azzam S, Schlatzer D, Nethery D, Saleh D, Li X, Akladious A, Chance MR, Strohl KP. Proteomic profiling of the hypothalamus in two mouse models of narcolepsy. Proteomics. PMID 28544614 DOI: 10.1002/Pmic.201600478 |
0.321 |
|
| 2017 |
Wang L, Chance MR. Protein footprinting comes of age: mass spectrometry for biophysical structure assessment. Molecular & Cellular Proteomics : McP. PMID 28275051 DOI: 10.1074/Mcp.O116.064386 |
0.411 |
|
| 2017 |
Gustavsson M, Wang L, van Gils N, Stephens BS, Zhang P, Schall TJ, Yang S, Abagyan R, Chance MR, Kufareva I, Handel TM. Structural basis of ligand interaction with atypical chemokine receptor 3. Nature Communications. 8: 14135. PMID 28098154 DOI: 10.1038/Ncomms14135 |
0.31 |
|
| 2016 |
Azzam S, Schlatzer D, Maxwell S, Li X, Bazdar D, Chen Y, Asaad R, Barnholtz-Sloan J, Chance MR, Sieg SF. Proteome and Protein Network Analyses of Memory T Cells Find Altered Translation and Cell Stress Signaling in Treated Human Immunodeficiency Virus Patients Exhibiting Poor CD4 Recovery. Open Forum Infectious Diseases. 3: ofw037. PMID 28293663 DOI: 10.1093/Ofid/Ofw037 |
0.324 |
|
| 2016 |
Gupta S, Feng J, Chance M, Ralston C. Recent Advances and Applications in Synchrotron X-Ray Protein Footprinting for Protein Structure and Dynamics Elucidation. Protein and Peptide Letters. PMID 26833224 DOI: 10.2174/0929866523666160201150057 |
0.404 |
|
| 2015 |
Tomechko SE, Lundberg KC, Jarvela J, Bebek G, Chesnokov NG, Schlatzer D, Ewing RM, Boom WH, Chance MR, Silver RF. Proteomic and bioinformatics profile of paired human alveolar macrophages and peripheral blood monocytes. Proteomics. PMID 26389541 DOI: 10.1002/Pmic.201400496 |
0.353 |
|
| 2015 |
Kaur P, Tomechko SE, Kiselar J, Shi W, Deperalta G, Wecksler AT, Gokulrangan G, Ling V, Chance MR. Characterizing monoclonal antibody structure by carboxyl group footprinting. Mabs. 7: 540-52. PMID 25933350 DOI: 10.1080/19420862.2015.1023683 |
0.329 |
|
| 2015 |
Kaur P, Kiselar J, Yang S, Chance MR. Quantitative protein topography analysis and high-resolution structure prediction using hydroxyl radical labeling and tandem-ion mass spectrometry (MS). Molecular & Cellular Proteomics : McP. 14: 1159-68. PMID 25687570 DOI: 10.1074/Mcp.O114.044362 |
0.393 |
|
| 2015 |
Huang W, Ravikumar KM, Chance MR, Yang S. Quantitative mapping of protein structure by hydroxyl radical footprinting-mediated structural mass spectrometry: a protection factor analysis. Biophysical Journal. 108: 107-15. PMID 25564857 DOI: 10.1016/J.Bpj.2014.11.013 |
0.405 |
|
| 2015 |
Lundberg KC, Fritz Y, Johnston A, Foster AM, Baliwag J, Gudjonsson JE, Schlatzer D, Gokulrangan G, McCormick TS, Chance MR, Ward NL. Proteomics of skin proteins in psoriasis: from discovery and verification in a mouse model to confirmation in humans. Molecular & Cellular Proteomics : McP. 14: 109-19. PMID 25351201 DOI: 10.1074/Mcp.M114.042242 |
0.324 |
|
| 2015 |
Huang W, Ravikumar KM, Chance MR, Yang S. Erratum: Quantitative mapping of protein structure by hydroxyl radical footprinting mediated structural mass spectrometry: A protection factor analysis (Biophysical Journal (2015) 108(107-115)) Biophysical Journal. 108. DOI: 10.1016/J.Bpj.2015.01.003 |
0.349 |
|
| 2014 |
Kaur P, Tomechko S, Kiselar J, Shi W, Deperalta G, Wecksler AT, Gokulrangan G, Ling V, Chance MR. Characterizing monoclonal antibody structure by carbodiimide/GEE footprinting. Mabs. 6: 1486-99. PMID 25484052 DOI: 10.4161/19420862.2014.975096 |
0.401 |
|
| 2014 |
Klinger AL, Kiselar J, Ilchenko S, Komatsu H, Chance MR, Axelsen PH. A synchrotron-based hydroxyl radical footprinting analysis of amyloid fibrils and prefibrillar intermediates with residue-specific resolution. Biochemistry. 53: 7724-34. PMID 25382225 DOI: 10.1021/Bi5010409 |
0.31 |
|
| 2014 |
Liu Y, Chance MR. Integrating phosphoproteomics in systems biology. Computational and Structural Biotechnology Journal. 10: 90-7. PMID 25349677 DOI: 10.1016/J.Csbj.2014.07.003 |
0.341 |
|
| 2014 |
Manjasetty BA, Chance MR, Burley SK, Panjikar S, Almo SC. Crystal structure of Clostridium acetobutylicum Aspartate kinase (CaAK): An important allosteric enzyme for amino acids production. Biotechnology Reports (Amsterdam, Netherlands). 3: 73-85. PMID 25170437 DOI: 10.1016/J.Btre.2014.06.009 |
0.722 |
|
| 2014 |
Gupta S, Celestre R, Petzold CJ, Chance MR, Ralston C. Development of a microsecond X-ray protein footprinting facility at the Advanced Light Source. Journal of Synchrotron Radiation. 21: 690-9. PMID 24971962 DOI: 10.1107/S1600577514007000 |
0.346 |
|
| 2014 |
Salanga CL, Dyer DP, Kiselar JG, Gupta S, Chance MR, Handel TM. Multiple glycosaminoglycan-binding epitopes of monocyte chemoattractant protein-3/CCL7 enable it to function as a non-oligomerizing chemokine. The Journal of Biological Chemistry. 289: 14896-912. PMID 24727473 DOI: 10.1074/Jbc.M114.547737 |
0.303 |
|
| 2014 |
Wang B, Tsybovsky Y, Palczewski K, Chance MR. Reliable determination of site-specific in vivo protein N-glycosylation based on collision-induced MS/MS and chromatographic retention time. Journal of the American Society For Mass Spectrometry. 25: 729-41. PMID 24549892 DOI: 10.1007/S13361-013-0823-6 |
0.315 |
|
| 2014 |
Bohon J, D'Mello R, Ralston C, Gupta S, Chance MR. Synchrotron X-ray footprinting on tour. Journal of Synchrotron Radiation. 21: 24-31. PMID 24365913 DOI: 10.1107/S1600577513024715 |
0.329 |
|
| 2014 |
Wiredja D, Liu Y, Schlatzer D, Gokulrangan G, Narla G, Chance M. Abstract 1616: Phosphoprotein enrichment pathway analysis tools for studying cancer signaling Cancer Research. 74: 1616-1616. DOI: 10.1158/1538-7445.Am2014-1616 |
0.306 |
|
| 2014 |
Gupta S, Celestre R, Bohon J, Chance M, Ralston C. Development of a High Throughput X-Ray Footprinting Facility at the Advanced Light Source to Study the Structure and Dynamics of Complex Biological Macromolecules Biophysical Journal. 106: 457a. DOI: 10.1016/J.Bpj.2013.11.2591 |
0.323 |
|
| 2013 |
Patel VN, Gokulrangan G, Chowdhury SA, Chen Y, Sloan AE, Koyutürk M, Barnholtz-Sloan J, Chance MR. Network signatures of survival in glioblastoma multiforme. Plos Computational Biology. 9: e1003237. PMID 24068912 DOI: 10.1371/Journal.Pcbi.1003237 |
0.329 |
|
| 2013 |
Bjeli? S, Wieser M, Frey D, Stirnimann CU, Chance MR, Jaussi R, Steinmetz MO, Kammerer RA. Structural basis for the oligomerization-state switch from a dimer to a trimer of an engineered cortexillin-1 coiled-coil variant. Plos One. 8: e63370. PMID 23691037 DOI: 10.1371/Journal.Pone.0063370 |
0.352 |
|
| 2013 |
Padayatti PS, Wang L, Gupta S, Orban T, Sun W, Salom D, Jordan SR, Palczewski K, Chance MR. A hybrid structural approach to analyze ligand binding by the serotonin type 4 receptor (5-HT4). Molecular & Cellular Proteomics : McP. 12: 1259-71. PMID 23378516 DOI: 10.1074/Mcp.M112.025536 |
0.376 |
|
| 2013 |
Bebek G, Gokulrangan G, Xu H, Chance MR. Abstract 3217: Identification of mutated peptides/proteins driving cancer phenotype utilizing improved shotgun proteomics and data analysis approaches. Cancer Research. 73: 3217-3217. DOI: 10.1158/1538-7445.Am2013-3217 |
0.323 |
|
| 2012 |
Ghosh SK, Yohannes E, Bebek G, Weinberg A, Jiang B, Willard B, Chance MR, Kinter MT, McCormick TS. Proteomic and bioinformatic profile of primary human oral epithelial cells. Journal of Proteome Research. 11: 5492-502. PMID 23035736 DOI: 10.1021/Pr3007254 |
0.337 |
|
| 2012 |
Kiser PD, Farquhar ER, Shi W, Sui X, Chance MR, Palczewski K. Structure of RPE65 isomerase in a lipidic matrix reveals roles for phospholipids and iron in catalysis. Proceedings of the National Academy of Sciences of the United States of America. 109: E2747-56. PMID 23012475 DOI: 10.1073/Pnas.1212025109 |
0.316 |
|
| 2012 |
Gupta S, D'Mello R, Chance MR. Structure and dynamics of protein waters revealed by radiolysis and mass spectrometry. Proceedings of the National Academy of Sciences of the United States of America. 109: 14882-7. PMID 22927377 DOI: 10.1073/Pnas.1209060109 |
0.318 |
|
| 2012 |
Kaur P, Schlatzer D, Cooke K, Chance MR. Pairwise protein expression classifier for candidate biomarker discovery for early detection of human disease prognosis. Bmc Bioinformatics. 13: 191. PMID 22870920 DOI: 10.1186/1471-2105-13-191 |
0.335 |
|
| 2012 |
Linderman GC, Chance MR, Bebek G. MAGNET: MicroArray Gene expression and Network Evaluation Toolkit. Nucleic Acids Research. 40: W152-6. PMID 22669910 DOI: 10.1093/Nar/Gks526 |
0.303 |
|
| 2012 |
Manjasetty BA, Yu XH, Panjikar S, Taguchi G, Chance MR, Liu CJ. Structural basis for modification of flavonol and naphthol glucoconjugates by Nicotiana tabacum malonyltransferase (NtMaT1). Planta. 236: 781-93. PMID 22610270 DOI: 10.1007/S00425-012-1660-8 |
0.726 |
|
| 2012 |
Bebek G, Koyutürk M, Price ND, Chance MR. Network biology methods integrating biological data for translational science. Briefings in Bioinformatics. 13: 446-59. PMID 22390873 DOI: 10.1093/Bib/Bbr075 |
0.305 |
|
| 2012 |
Chen Y, Farquhar ER, Chance MR, Palczewski K, Kiser PD. Insights into substrate specificity and metal activation of mammalian tetrahedral aspartyl aminopeptidase. The Journal of Biological Chemistry. 287: 13356-70. PMID 22356908 DOI: 10.1074/Jbc.M112.347518 |
0.358 |
|
| 2012 |
Schlatzer DM, Dazard JE, Ewing RM, Ilchenko S, Tomcheko SE, Eid S, Ho V, Yanik G, Chance MR, Cooke KR. Human biomarker discovery and predictive models for disease progression for idiopathic pneumonia syndrome following allogeneic stem cell transplantation. Molecular & Cellular Proteomics : McP. 11: M111.015479. PMID 22337588 DOI: 10.1074/Mcp.M111.015479 |
0.303 |
|
| 2012 |
Wang L, Cvetkov TL, Chance MR, Moiseenkova-Bell VY. Identification of in vivo disulfide conformation of TRPA1 ion channel. The Journal of Biological Chemistry. 287: 6169-76. PMID 22207754 DOI: 10.1074/Jbc.M111.329748 |
0.325 |
|
| 2011 |
Oztug Durer ZA, Kamal JK, Benchaar S, Chance MR, Reisler E. Myosin binding surface on actin probed by hydroxyl radical footprinting and site-directed labels. Journal of Molecular Biology. 414: 204-16. PMID 21986200 DOI: 10.1016/J.Jmb.2011.09.035 |
0.324 |
|
| 2011 |
Barnholtz-Sloan J, Chance MR. Frontiers of oncology: biobanking resources for the 21st century. Journal of Clinical Bioinformatics. 1: 13. PMID 21884631 DOI: 10.1186/2043-9113-1-13 |
0.325 |
|
| 2011 |
Wang L, Chance MR. Structural mass spectrometry of proteins using hydroxyl radical based protein footprinting. Analytical Chemistry. 83: 7234-41. PMID 21770468 DOI: 10.1021/Ac200567U |
0.371 |
|
| 2011 |
Shi W, Punta M, Bohon J, Sauder JM, D'Mello R, Sullivan M, Toomey J, Abel D, Lippi M, Passerini A, Frasconi P, Burley SK, Rost B, Chance MR. Characterization of metalloproteins by high-throughput X-ray absorption spectroscopy. Genome Research. 21: 898-907. PMID 21482623 DOI: 10.1101/Gr.115097.110 |
0.401 |
|
| 2011 |
Shi W, Chance MR. Metalloproteomics: forward and reverse approaches in metalloprotein structural and functional characterization. Current Opinion in Chemical Biology. 15: 144-8. PMID 21130021 DOI: 10.1016/J.Cbpa.2010.11.004 |
0.359 |
|
| 2011 |
Nibbe RK, Chowdhury SA, Koyutürk M, Ewing R, Chance MR. Protein-protein interaction networks and subnetworks in the biology of disease. Wiley Interdisciplinary Reviews. Systems Biology and Medicine. 3: 357-67. PMID 20865778 DOI: 10.1002/Wsbm.121 |
0.304 |
|
| 2010 |
Cafasso J, Manjasetty BA, Karr EA, Sandman K, Chance MR, Reeve JN. Preliminary crystallography confirms that the archaeal DNA-binding and tryptophan-sensing regulator TrpY is a dimer. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1493-5. PMID 21045304 DOI: 10.1107/S1744309110036031 |
0.711 |
|
| 2010 |
Wang L, Qin Y, Ilchenko S, Bohon J, Shi W, Cho MW, Takamoto K, Chance MR. Structural analysis of a highly glycosylated and unliganded gp120-based antigen using mass spectrometry. Biochemistry. 49: 9032-45. PMID 20825246 DOI: 10.1021/Bi1011332 |
0.357 |
|
| 2010 |
Kiselar JG, Chance MR. Future directions of structural mass spectrometry using hydroxyl radical footprinting. Journal of Mass Spectrometry : Jms. 45: 1373-82. PMID 20812376 DOI: 10.1002/Jms.1808 |
0.414 |
|
| 2010 |
Sampathkumar P, Lu F, Zhao X, Li Z, Gilmore J, Bain K, Rutter ME, Gheyi T, Schwinn KD, Bonanno JB, Pieper U, Fajardo JE, Fiser A, Almo SC, Swaminathan S, ... Chance MR, et al. Structure of a putative BenF-like porin from Pseudomonas fluorescens Pf-5 at 2.6 A resolution. Proteins. 78: 3056-62. PMID 20737437 DOI: 10.1002/Prot.22829 |
0.338 |
|
| 2010 |
Orban T, Bereta G, Miyagi M, Wang B, Chance MR, Sousa MC, Palczewski K. Conformational changes in guanylate cyclase-activating protein 1 induced by Ca2+ and N-terminal fatty acid acylation. Structure (London, England : 1993). 18: 116-26. PMID 20152158 DOI: 10.1016/J.Str.2009.11.008 |
0.306 |
|
| 2010 |
Chance MR, Chang J, Liu S, Gokulrangan G, Chen DH, Lindsay A, Geng R, Zheng QY, Alagramam K. Proteomics, bioinformatics and targeted gene expression analysis reveals up-regulation of cochlin and identifies other potential biomarkers in the mouse model for deafness in Usher syndrome type 1F. Human Molecular Genetics. 19: 1515-27. PMID 20097680 DOI: 10.1093/Hmg/Ddq025 |
0.349 |
|
| 2010 |
Orban T, Gupta S, Palczewski K, Chance MR. Visualizing water molecules in transmembrane proteins using radiolytic labeling methods. Biochemistry. 49: 827-34. PMID 20047303 DOI: 10.1021/Bi901889T |
0.337 |
|
| 2010 |
Yohannes E, Chang J, Tar MT, Davies KP, Chance MR. Molecular targets for diabetes mellitus-associated erectile dysfunction. Molecular & Cellular Proteomics : McP. 9: 565-78. PMID 20007950 DOI: 10.1074/Mcp.M900286-Mcp200 |
0.336 |
|
| 2009 |
Kiser PD, Golczak M, Lodowski DT, Chance MR, Palczewski K. Crystal structure of native RPE65, the retinoid isomerase of the visual cycle. Proceedings of the National Academy of Sciences of the United States of America. 106: 17325-30. PMID 19805034 DOI: 10.1073/Pnas.0906600106 |
0.306 |
|
| 2009 |
Kaur P, Kiselar JG, Chance MR. Integrated algorithms for high-throughput examination of covalently labeled biomolecules by structural mass spectrometry. Analytical Chemistry. 81: 8141-9. PMID 19788317 DOI: 10.1021/Ac9013644 |
0.374 |
|
| 2009 |
Angel TE, Gupta S, Jastrzebska B, Palczewski K, Chance MR. Structural waters define a functional channel mediating activation of the GPCR, rhodopsin. Proceedings of the National Academy of Sciences of the United States of America. 106: 14367-72. PMID 19706523 DOI: 10.1073/Pnas.0901074106 |
0.352 |
|
| 2009 |
Angel TE, Chance MR, Palczewski K. Conserved waters mediate structural and functional activation of family A (rhodopsin-like) G protein-coupled receptors. Proceedings of the National Academy of Sciences of the United States of America. 106: 8555-60. PMID 19433801 DOI: 10.1073/Pnas.0903545106 |
0.309 |
|
| 2009 |
Pieper U, Chiang R, Seffernick JJ, Brown SD, Glasner ME, Kelly L, Eswar N, Sauder JM, Bonanno JB, Swaminathan S, Burley SK, Zheng X, Chance MR, Almo SC, Gerlt JA, et al. Target selection and annotation for the structural genomics of the amidohydrolase and enolase superfamilies. Journal of Structural and Functional Genomics. 10: 107-25. PMID 19219566 DOI: 10.1007/S10969-008-9056-5 |
0.386 |
|
| 2009 |
Nibbe RK, Markowitz S, Myeroff L, Ewing R, Chance MR. Discovery and scoring of protein interaction subnetworks discriminative of late stage human colon cancer. Molecular & Cellular Proteomics : McP. 8: 827-45. PMID 19098285 DOI: 10.1074/Mcp.M800428-Mcp200 |
0.343 |
|
| 2009 |
D'Mello R, Gupta S, Bohon J, Abel D, Toomey J, Sullivan M, Chance MR. X-ray Footprinting at Beamline X28C: A National Resource for Studying Macromolecular Structure and Dynamics Biophysical Journal. 96: 66a-67a. DOI: 10.1016/J.Bpj.2008.12.243 |
0.384 |
|
| 2009 |
Gupta S, Angel T, Jastrzebska B, Palczewski K, Chance MR. X-ray Footprinting Studies on Photoactivation of Bovine Rhodopsin Biophysical Journal. 96: 195a. DOI: 10.1016/J.Bpj.2008.12.1047 |
0.372 |
|
| 2008 |
Chang J, Chance MR, Nicholas C, Ahmed N, Guilmeau S, Flandez M, Wang D, Byun DS, Nasser S, Albanese JM, Corner GA, Heerdt BG, Wilson AJ, Augenlicht LH, Mariadason JM. Proteomic changes during intestinal cell maturation in vivo. Journal of Proteomics. 71: 530-46. PMID 18824147 DOI: 10.1016/J.Jprot.2008.08.003 |
0.322 |
|
| 2008 |
Bohon J, Jennings LD, Phillips CM, Licht S, Chance MR. Synchrotron protein footprinting supports substrate translocation by ClpA via ATP-induced movements of the D2 loop. Structure (London, England : 1993). 16: 1157-65. PMID 18682217 DOI: 10.1016/J.Str.2008.04.016 |
0.331 |
|
| 2008 |
Shi W, Chance MR. Metallomics and metalloproteomics Cellular and Molecular Life Sciences. 65: 3040-3048. PMID 18560755 DOI: 10.1007/S00018-008-8189-9 |
0.373 |
|
| 2008 |
Yohannes E, Chang J, Christ GJ, Davies KP, Chance MR. Proteomics analysis identifies molecular targets related to diabetes mellitus-associated bladder dysfunction. Molecular & Cellular Proteomics : McP. 7: 1270-85. PMID 18337374 DOI: 10.1074/Mcp.M700563-Mcp200 |
0.329 |
|
| 2008 |
Gräslund S, Nordlund P, Weigelt J, Hallberg BM, Bray J, Gileadi O, Knapp S, Oppermann U, Arrowsmith C, Hui R, Ming J, dhe-Paganon S, ... ... Chance MR, et al. Protein production and purification. Nature Methods. 5: 135-46. PMID 18235434 DOI: 10.1038/Nmeth.F.202 |
0.316 |
|
| 2008 |
Manjasetty BA, Turnbull AP, Panjikar S, Büssow K, Chance MR. Automated technologies and novel techniques to accelerate protein crystallography for structural genomics. Proteomics. 8: 612-25. PMID 18210369 DOI: 10.1002/Pmic.200700687 |
0.746 |
|
| 2008 |
Zheng X, Wintrode PL, Chance MR. Complementary structural mass spectrometry techniques reveal local dynamics in functionally important regions of a metastable serpin. Structure (London, England : 1993). 16: 38-51. PMID 18184582 DOI: 10.1016/J.Str.2007.10.019 |
0.338 |
|
| 2008 |
Kamal JK, Chance MR. Modeling of protein binary complexes using structural mass spectrometry data. Protein Science : a Publication of the Protein Society. 17: 79-94. PMID 18042684 DOI: 10.1110/Ps.073071808 |
0.368 |
|
| 2008 |
Lattif AA, Chandra J, Chang J, Liu S, Zhou G, Chance MR, Ghannoum MA, Mukherjee PK. Proteomics and Pathway Mapping Analyses Reveal Phase-Dependent Over-Expression of Proteins Associated with Carbohydrate Metabolic Pathways in Candida albicans Biofilms The Open Proteomics Journal. 1: 5-26. DOI: 10.2174/1875039700801010005 |
0.308 |
|
| 2007 |
Almo SC, Bonanno JB, Sauder JM, Emtage S, Dilorenzo TP, Malashkevich V, Wasserman SR, Swaminathan S, Eswaramoorthy S, Agarwal R, Kumaran D, Madegowda M, Ragumani S, Patskovsky Y, Alvarado J, ... ... Chance MR, et al. Structural genomics of protein phosphatases. Journal of Structural and Functional Genomics. 8: 121-40. PMID 18058037 DOI: 10.1007/S10969-007-9036-1 |
0.404 |
|
| 2007 |
Xu G, Chance MR. Hydroxyl radical-mediated modification of proteins as probes for structural proteomics. Chemical Reviews. 107: 3514-43. PMID 17683160 DOI: 10.1021/Cr0682047 |
0.374 |
|
| 2007 |
Gupta S, Cheng H, Mollah AK, Jamison E, Morris S, Chance MR, Khrapunov S, Brenowitz M. DNA and protein footprinting analysis of the modulation of DNA binding by the N-terminal domain of the Saccharomyces cerevisiae TATA binding protein. Biochemistry. 46: 9886-98. PMID 17683121 DOI: 10.1021/Bi7003608 |
0.312 |
|
| 2007 |
Kamal JK, Benchaar SA, Takamoto K, Reisler E, Chance MR. Three-dimensional structure of cofilin bound to monomeric actin derived by structural mass spectrometry data. Proceedings of the National Academy of Sciences of the United States of America. 104: 7910-5. PMID 17470807 DOI: 10.1073/Pnas.0611283104 |
0.351 |
|
| 2007 |
Gupta S, Sullivan M, Toomey J, Kiselar J, Chance MR. The Beamline X28C of the Center for Synchrotron Biosciences: a national resource for biomolecular structure and dynamics experiments using synchrotron footprinting. Journal of Synchrotron Radiation. 14: 233-43. PMID 17435298 DOI: 10.1107/S0909049507013118 |
0.368 |
|
| 2007 |
Kiselar JG, Mahaffy R, Pollard TD, Almo SC, Chance MR. Visualizing Arp2/3 complex activation mediated by binding of ATP and WASp using structural mass spectrometry. Proceedings of the National Academy of Sciences of the United States of America. 104: 1552-7. PMID 17251352 DOI: 10.1073/Pnas.0605380104 |
0.337 |
|
| 2007 |
Takamoto K, Kamal JK, Chance MR. Biochemical implications of a three-dimensional model of monomeric actin bound to magnesium-chelated ATP. Structure (London, England : 1993). 15: 39-51. PMID 17223531 DOI: 10.1016/J.Str.2006.11.005 |
0.326 |
|
| 2007 |
Manjasetty BA, Shi W, Zhan C, Fiser A, Chance MR. A high-throughput approach to protein structure analysis. Genetic Engineering. 28: 105-28. PMID 17153936 DOI: 10.1007/978-0-387-34504-8_7 |
0.733 |
|
| 2007 |
Xu G, Kiselar J, He Q, Chance MR. Secondary reactions and strategies to improve quantitative protein footprinting. Analytical Chemistry. 77: 3029-37. PMID 15889890 DOI: 10.1021/Ac048282Z |
0.308 |
|
| 2006 |
Manjasetty BA, Chance MR. Crystal Structure of Escherichia coli L-Arabinose Isomerase (ECAI), The Putative Target of Biological Tagatose Production Journal of Molecular Biology. 360: 297-309. PMID 16756997 DOI: 10.1016/J.Jmb.2006.04.040 |
0.719 |
|
| 2006 |
Takamoto K, Chance MR. Radiolytic protein footprinting with mass spectrometry to probe the structure of macromolecular complexes Annual Review of Biophysics and Biomolecular Structure. 35: 251-276. PMID 16689636 DOI: 10.1146/Annurev.Biophys.35.040405.102050 |
0.376 |
|
| 2006 |
Zheng QY, Rozanas CR, Thalmann I, Chance MR, Alagramam KN. Inner ear proteomics of mouse models for deafness, a discovery strategy. Brain Research. 1091: 113-21. PMID 16600193 DOI: 10.1016/J.Brainres.2006.02.069 |
0.304 |
|
| 2006 |
Takamoto K, Chance MR. Footprinting Methods to Examine the Structure and Dynamics of Nucleic Acids Reviews in Cell Biology and Molecular Medicine. DOI: 10.1002/3527600906.Mcb.200300091 |
0.35 |
|
| 2006 |
Guan J, Chance MR. Footprinting Methods to Examine the Structure and Dynamics of Proteins Reviews in Cell Biology and Molecular Medicine. DOI: 10.1002/3527600906.Mcb.200300025 |
0.423 |
|
| 2005 |
Zhan C, Fedorov EV, Shi W, Ramagopal UA, Thirumuruhan R, Manjasetty BA, Almo SC, Fiser A, Chance MR, Fedorov AA. The ybeY protein from Escherichia coli is a metalloprotein. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 61: 959-63. PMID 16511207 DOI: 10.1107/S1744309105031131 |
0.752 |
|
| 2005 |
Xu G, Liu R, Zak O, Aisen P, Chance MR. Structural allostery and binding of the transferrin*receptor complex. Molecular & Cellular Proteomics : McP. 4: 1959-67. PMID 16332734 DOI: 10.1074/Mcp.M500095-Mcp200 |
0.327 |
|
| 2005 |
Shi W, Zhan C, Ignatov A, Manjasetty BA, Marinkovic N, Sullivan M, Huang R, Chance MR. Metalloproteomics: high-throughput structural and functional annotation of proteins in structural genomics. Structure (London, England : 1993). 13: 1473-86. PMID 16216579 DOI: 10.1016/J.Str.2005.07.014 |
0.772 |
|
| 2005 |
Bonanno JB, Almo SC, Bresnick A, Chance MR, Fiser A, Swaminathan S, Jiang J, Studier FW, Shapiro L, Lima CD, Gaasterland TM, Sali A, Bain K, Feil I, Gao X, et al. New York-Structural GenomiX Research Consortium (NYSGXRC): a large scale center for the protein structure initiative. Journal of Structural and Functional Genomics. 6: 225-32. PMID 16211523 DOI: 10.1007/S10969-005-6827-0 |
0.384 |
|
| 2005 |
Guan JQ, Chance MR. Structural proteomics of macromolecular assemblies using oxidative footprinting and mass spectrometry Trends in Biochemical Sciences. 30: 583-592. PMID 16126388 DOI: 10.1016/J.Tibs.2005.08.007 |
0.35 |
|
| 2005 |
Xu G, Chance MR. Radiolytic modification and reactivity of amino acid residues serving as structural probes for protein footprinting Analytical Chemistry. 77: 4549-4555. PMID 16013872 DOI: 10.1021/Ac050299+ |
0.352 |
|
| 2005 |
Xu G, Chance MR. Radiolytic modification of sulfur-containing amino acid residues in model peptides: Fundamental studies for protein footprinting Analytical Chemistry. 77: 2437-2449. PMID 15828779 DOI: 10.1021/Ac0484629 |
0.329 |
|
| 2005 |
Gupta S, Mangel WF, Sullivan M, Takamoto K, Chance MR. Technical Reports: Mapping a Functional Viral Protein in Solution Using Synchrotron X-ray Footprinting Technology Synchrotron Radiation News. 18: 25-34. DOI: 10.1080/08940880500457537 |
0.372 |
|
| 2005 |
Marinkovic NS, Gupta S, Zhan C, Chance MR. Synchrotron radiation in biosciences Nuclear Instruments and Methods in Physics Research Section B: Beam Interactions With Materials and Atoms. 241: 242-246. DOI: 10.1016/J.Nimb.2005.07.174 |
0.365 |
|
| 2004 |
Chance MR, Fiser A, Sali A, Pieper U, Eswar N, Xu G, Fajardo JE, Radhakannan T, Marinkovic N. High-throughput computational and experimental techniques in structural genomics. Genome Research. 14: 2145-54. PMID 15489337 DOI: 10.1101/Gr.2537904 |
0.404 |
|
| 2004 |
Guan JQ, Almo SC, Chance MR. Synchrotron Radiolysis and Mass Spectrometry: A New Approach to Research on the Actin Cytoskeleton Accounts of Chemical Research. 37: 221-229. PMID 15096059 DOI: 10.1021/Ar0302235 |
0.345 |
|
| 2004 |
Xu G, Takamoto K, Chance MR. Radiolytic modification of basic amino acid residues in peptides: probes for examining protein-protein interactions. Analytical Chemistry. 75: 6995-7007. PMID 14670063 DOI: 10.1021/Ac035104H |
0.361 |
|
| 2003 |
Liu R, Guan JQ, Zak O, Aisen P, Chance MR. Structural reorganization of the transferrin C-lobe and transferrin receptor upon complex formation: the C-lobe binds to the receptor helical domain. Biochemistry. 42: 12447-54. PMID 14580189 DOI: 10.1021/Bi0352973 |
0.309 |
|
| 2003 |
Huang RY, Miller LM, Carlson CS, Chance MR. In situ chemistry of osteoporosis revealed by synchrotron infrared microspectroscopy. Bone. 33: 514-21. PMID 14555254 DOI: 10.1016/S8756-3282(03)00233-3 |
0.513 |
|
| 2003 |
Kiselar JG, Janmey PA, Almo SC, Chance MR. Structural analysis of gelsolin using synchrotron protein footprinting. Molecular & Cellular Proteomics : McP. 2: 1120-32. PMID 12966145 DOI: 10.1074/Mcp.M300068-Mcp200 |
0.359 |
|
| 2003 |
Huang RY, Boulton SJ, Vidal M, Almo SC, Bresnick AR, Chance MR. High-throughput expression, purification, and characterization of recombinant Caenorhabditis elegans proteins. Biochemical and Biophysical Research Communications. 307: 928-34. PMID 12878200 DOI: 10.1016/S0006-291X(03)01265-8 |
0.606 |
|
| 2003 |
Reboul J, Vaglio P, Rual JF, Lamesch P, Martinez M, Armstrong CM, Li S, Jacotot L, Bertin N, Janky R, Moore T, Hudson JR, Hartley JL, Brasch MA, Vandenhaute J, ... ... Chance MR, et al. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Nature Genetics. 34: 35-41. PMID 12679813 DOI: 10.1038/Ng1140 |
0.583 |
|
| 2003 |
Rashidzadeh H, Khrapunov S, Chance MR, Brenowitz M. Solution structure and interdomain interactions of the Saccharomyces cerevisiae "TATA binding protein" (TBP) probed by radiolytic protein footprinting. Biochemistry. 42: 3655-65. PMID 12667055 DOI: 10.1021/Bi027203F |
0.334 |
|
| 2003 |
Brenowitz M, Chance MR, Dhavan G, Takamoto K. Probing the structural dynamics of nucleic acids by quantitative time-resolved and equilibrium hydroxyl radical "footprinting". Current Opinion in Structural Biology. 12: 648-53. PMID 12464318 DOI: 10.1016/S0959-440X(02)00366-4 |
0.311 |
|
| 2002 |
Marinkovic NS, Huang R, Bromberg P, Sullivan M, Toomey J, Miller LM, Sperber E, Moshe S, Jones KW, Chouparova E, Lappi S, Franzen S, Chance MR. Center for Synchrotron Biosciences' U2B beamline: an international resource for biological infrared spectroscopy. Journal of Synchrotron Radiation. 9: 189-97. PMID 12091724 DOI: 10.1107/S0909049502008543 |
0.551 |
|
| 2002 |
Guan JQ, Vorobiev S, Almo SC, Chance MR. Mapping the G-actin binding surface of cofilin using synchrotron protein footprinting Biochemistry. 41: 5765-5775. PMID 11980480 DOI: 10.1021/Bi0121104 |
0.326 |
|
| 2002 |
Chance MR, Bresnick AR, Burley SK, Jiang JS, Lima CD, Sali A, Almo SC, Bonanno JB, Buglino JA, Boulton S, Chen H, Eswar N, He G, Huang R, Ilyin V, et al. Structural genomics: a pipeline for providing structures for the biologist. Protein Science : a Publication of the Protein Society. 11: 723-38. PMID 11910018 DOI: 10.1110/Ps.4570102 |
0.594 |
|
| 2002 |
Huang RY, Miller LM, Carlson CS, Chance MR. Characterization of bone mineral composition in the proximal tibia of cynomolgus monkeys: effect of ovariectomy and nandrolone decanoate treatment. Bone. 30: 492-7. PMID 11882463 DOI: 10.1016/S8756-3282(01)00691-3 |
0.516 |
|
| 2002 |
Kiselar JG, Maleknia SD, Sullivan M, Downard KM, Chance MR. Hydroxyl radical probe of protein surfaces using synchrotron X-ray radiolysis and mass spectrometry. International Journal of Radiation Biology. 78: 101-14. PMID 11779360 DOI: 10.1080/09553000110094805 |
0.334 |
|
| 2001 |
Goldsmith SC, Guan JQ, Almo SC, Chance MR. Synchrotron protein footprinting: A technique to investigate protein-protein interactions Journal of Biomolecular Structure and Dynamics. 19: 405-418. PMID 11790140 DOI: 10.1080/07391102.2001.10506750 |
0.409 |
|
| 2001 |
Chance MR. Unfolding of apomyoglobin examined by synchrotron footprinting Biochemical and Biophysical Research Communications. 287: 614-621. PMID 11563839 DOI: 10.1006/Bbrc.2001.5628 |
0.403 |
|
| 2001 |
Maleknia SD, Ralston CY, Brenowitz MD, Downard KM, Chance MR. Determination of macromolecular folding and structure by synchrotron X-ray radiolysis techniques Analytical Biochemistry. 289: 103-115. PMID 11161303 DOI: 10.1006/Abio.2000.4910 |
0.355 |
|
| 2000 |
Ralston CY, He Q, Brenowitz M, Chance MR. Stability and cooperativity of individual tertiary contacts in RNA revealed through chemical denaturation. Nature Structural Biology. 7: 371-4. PMID 10802732 DOI: 10.1038/75139 |
0.313 |
|
| 2000 |
Maleknia SD, Chance MR, Downard KM. Electrospray-assisted modification of proteins: a radical probe of protein structure. Rapid Communications in Mass Spectrometry : Rcm. 13: 2352-8. PMID 10567934 DOI: 10.1002/(Sici)1097-0231(19991215)13:23<2352::Aid-Rcm798>3.0.Co;2-X |
0.374 |
|
| 1999 |
Burley SK, Almo SC, Bonanno JB, Capel M, Chance MR, Gaasterland T, Lin D, Sali A, Studier FW, Swaminathan S. Structural genomics: beyond the human genome project. Nature Genetics. 23: 151-7. PMID 10508510 DOI: 10.1038/13783 |
0.316 |
|
| 1999 |
Miller LM, Huang R, Chance MR, Carlson CS. Applications of fluorescence-assisted infrared microspectroscopy to the study of osteoporosis Synchrotron Radiation News. 12: 21-27. DOI: 10.1080/08940889908260970 |
0.509 |
|
| 1998 |
Sclavi B, Woodson S, Sullivan M, Chance M, Brenowitz M. Following the folding of RNA with time-resolved synchrotron X-ray footprinting. Methods in Enzymology. 295: 379-402. PMID 9750229 DOI: 10.1016/S0076-6879(98)95050-9 |
0.302 |
|
| 1998 |
Sclavi B, Sullivan M, Chance MR, Brenowitz M, Woodson SA. RNA folding at millisecond intervals by synchrotron hydroxyl radical footprinting. Science (New York, N.Y.). 279: 1940-3. PMID 9506944 DOI: 10.1126/Science.279.5358.1940 |
0.316 |
|
| 1997 |
Miller LM, Pedraza AJ, Chance MR. Identification of conformational substates involved in nitric oxide binding to ferric and ferrous myoglobin through difference Fourier transform infrared spectroscopy (FTIR). Biochemistry. 36: 12199-207. PMID 9315857 DOI: 10.1021/Bi962744O |
0.301 |
|
| 1997 |
Sclavi B, Woodson S, Sullivan M, Chance MR, Brenowitz M. Time-resolved synchrotron X-ray "footprinting", a new approach to the study of nucleic acid structure and function: application to protein-DNA interactions and RNA folding. Journal of Molecular Biology. 266: 144-59. PMID 9054977 DOI: 10.1006/Jmbi.1996.0775 |
0.351 |
|
| 1997 |
Scheuring E, Padmakumar R, Banerjee R, Chance MR. Extended X-ray Absorption Fine Structure Analysis of Coenzyme B12Bound to Methylmalonyl-Coenzyme A Mutase Using Global Mapping Techniques† Journal of the American Chemical Society. 119: 12192-12200. DOI: 10.1021/Ja9635239 |
0.303 |
|
| 1996 |
Chance MR, Miller LM, Fischetti RF, Scheuring E, Huang WX, Sclavi B, Hai Y, Sullivan M. Global mapping of structural solutions provided by the extended X-ray absorption fine structure ab initio code FEFF 6.01: structure of the cryogenic photoproduct of the myoglobin-carbon monoxide complex. Biochemistry. 35: 9014-23. PMID 8703904 DOI: 10.1021/Bi9605503 |
0.366 |
|
| 1996 |
Scheuring EM, Clavin W, Wirt MD, Miller LM, Fischetti RF, Lu Y, Mahoney N, Xie A, Wu J, Chance MR. Time-Resolved X-ray Absorption Spectroscopy of Photoreduced Base-off Cob(II)alamin Compared to the Co(II) Species inClostridium thermoaceticum The Journal of Physical Chemistry. 100: 3344-3348. DOI: 10.1021/Jp943066N |
0.31 |
|
| 1995 |
Luján HD, Mowatt MR, Wu JJ, Lu Y, Lees A, Chance MR, Nash TE. Purification of a variant-specific surface protein of Giardia lamblia and characterization of its metal-binding properties. The Journal of Biological Chemistry. 270: 13807-13. PMID 7775437 DOI: 10.1074/Jbc.270.23.13807 |
0.319 |
|
| 1995 |
Wirt MD, Kumar M, Wu JJ, Scheuring EM, Ragsdale SW, Chance MR. Structural and electronic factors in heterolytic cleavage: formation of the Co(I) intermediate in the corrinoid/iron-sulfur protein from Clostridium thermoaceticum. Biochemistry. 34: 5269-73. PMID 7711048 DOI: 10.1021/Bi00015A042 |
0.312 |
|
| 1993 |
Frisbie SM, Chance MR. Human cobalophilin: The structure of bound methylcobalamin and a functional role in protecting methylcobalamin from photolysis Biochemistry. 32: 13886-13892. PMID 8268164 DOI: 10.1021/Bi00213A018 |
0.349 |
|
| 1992 |
Chance MR, Sagi I, Wirt MD, Frisbie SM, Scheuring E, Chen E, Bess JW, Henderson LE, Arthur LO, South TL, Ferez-Alvarado G, Summers MF. Extended x-ray absorption fine structure studies of a retrovirus: Equine infectious anemia virus cysteine arrays are coordinated to zinc Proceedings of the National Academy of Sciences of the United States of America. 89: 10041-10045. PMID 1332027 DOI: 10.1073/Pnas.89.21.10041 |
0.356 |
|
| 1992 |
Summers MF, Henderson LE, Chance MR, Bess JW, South TL, Blake PR, Sagi I, Perez-Alvarado G, Sowder RC, Hare DR. Nucleocapsid zinc fingers detected in retroviruses: EXAFS studies of intact viruses and the solution-state structure of the nucleocapsid protein from HIV-1. Protein Science : a Publication of the Protein Society. 1: 563-74. PMID 1304355 DOI: 10.1002/Pro.5560010502 |
0.366 |
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