| Year |
Citation |
Score |
| 2024 |
Zhou X, Shen X, Johnson JS, Spakowicz DJ, Agnello M, Zhou W, Avina M, Honkala A, Chleilat F, Chen SJ, Cha K, Leopold S, Zhu C, Chen L, Lyu L, et al. Longitudinal profiling of the microbiome at four body sites reveals core stability and individualized dynamics during health and disease. Biorxiv : the Preprint Server For Biology. PMID 38352363 DOI: 10.1101/2024.02.01.577565 |
0.367 |
|
| 2022 |
Zhou X, Wang B, Demkowicz PC, Johnson JS, Chen Y, Spakowicz DJ, Zhou Y, Dorsett Y, Chen L, Sodergren E, Kuchel GA, Weinstock GM. Exploratory studies of oral and fecal microbiome in healthy human aging. Frontiers in Aging. 3: 1002405. PMID 36338834 DOI: 10.3389/fragi.2022.1002405 |
0.44 |
|
| 2020 |
Liu Z, Li C, Fan X, Kuang Y, Zhang X, Chen L, Song J, Zhou Y, Takahashi E, He G, Li W. Nicotinamide, a vitamin B3 ameliorates depressive behaviors independent of SIRT1 activity in mice. Molecular Brain. 13: 162. PMID 33228716 DOI: 10.1186/s13041-020-00703-4 |
0.45 |
|
| 2020 |
Tang L, Chi H, Li W, Zhang L, Zhang L, Chen L, Zou S, Liu H, Liang Y, Yu J, Dong H. FgPsd2, a phosphatidylserine decarboxylase of Fusarium graminearum, regulates development and virulence. Fungal Genetics and Biology : Fg & B. 103483. PMID 33176219 DOI: 10.1016/j.fgb.2020.103483 |
0.305 |
|
| 2020 |
Han X, Chen L, Li W, Zhang L, Zhang L, Zou S, Liang Y, Yu J, Dong H. Endocytic FgEde1 regulates virulence and autophagy in Fusarium graminearum. Fungal Genetics and Biology : Fg & B. 103400. PMID 32387406 DOI: 10.1016/j.fgb.2020.103400 |
0.322 |
|
| 2019 |
Song J, Yang X, Zhou Y, Chen L, Zhang X, Liu Z, Niu W, Zhan N, Fan X, Khan AA, Kuang Y, Song L, He G, Li W. Dysregulation of neuron differentiation in an autistic savant with exceptional memory. Molecular Brain. 12: 91. PMID 31699123 DOI: 10.1186/S13041-019-0507-7 |
0.478 |
|
| 2019 |
Johnson JS, Spakowicz DJ, Hong BY, Petersen LM, Demkowicz P, Chen L, Leopold SR, Hanson BM, Agresta HO, Gerstein M, Sodergren E, Weinstock GM. Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis. Nature Communications. 10: 5029. PMID 31695033 DOI: 10.1038/S41467-019-13036-1 |
0.421 |
|
| 2019 |
Zhou W, Sailani MR, Contrepois K, Zhou Y, Ahadi S, Leopold SR, Zhang MJ, Rao V, Avina M, Mishra T, Johnson J, Lee-McMullen B, Chen S, Metwally AA, Tran TDB, ... ... Chen L, et al. Longitudinal multi-omics of host-microbe dynamics in prediabetes. Nature. 569: 663-671. PMID 31142858 DOI: 10.1038/S41586-019-1236-X |
0.436 |
|
| 2019 |
Zhang X, Chu X, Chen L, Fu J, Wang S, Song J, Kan G, Jiang W, He G, Chen X, Li W. Simulated weightlessness procedure, head-down bed rest impairs adult neurogenesis in the hippocampus of rhesus macaque. Molecular Brain. 12: 46. PMID 31072406 DOI: 10.1186/S13041-019-0459-Y |
0.707 |
|
| 2018 |
Cignarella F, Cantoni C, Ghezzi L, Salter A, Dorsett Y, Chen L, Phillips D, Weinstock GM, Fontana L, Cross AH, Zhou Y, Piccio L. Intermittent Fasting Confers Protection in CNS Autoimmunity by Altering the Gut Microbiota. Cell Metabolism. 27: 1222-1235.e6. PMID 29874567 DOI: 10.1016/J.Cmet.2018.05.006 |
0.4 |
|
| 2018 |
Schechter LM, Creely DP, Garner CD, Shortridge D, Nguyen H, Chen L, Hanson BM, Sodergren E, Weinstock GM, Dunne WM, van Belkum A, Leopold SR. Extensive Gene Amplification as a Mechanism for Piperacillin-Tazobactam Resistance in Escherichia coli. Mbio. 9. PMID 29691340 DOI: 10.1128/Mbio.00583-18 |
0.405 |
|
| 2017 |
Petersen LM, Bautista EJ, Nguyen H, Hanson BM, Chen L, Lek SH, Sodergren E, Weinstock GM. Community characteristics of the gut microbiomes of competitive cyclists. Microbiome. 5: 98. PMID 28797298 DOI: 10.1186/S40168-017-0320-4 |
0.421 |
|
| 2017 |
Chen L, Serdyuk T, Yang B, Wang S, Chen S, Chu X, Zhang X, Song J, Bao H, Zhou C, Wang X, Dong S, Song L, Chen F, He G, et al. Abnormal circadian oscillation of hippocampal MAPK activity and power spectrums in NF1 mutant mice. Molecular Brain. 10: 29. PMID 28673309 DOI: 10.1186/S13041-017-0309-8 |
0.675 |
|
| 2016 |
Chu X, Zhou Y, Hu Z, Lou J, Song W, Li J, Liang X, Chen C, Wang S, Yang B, Chen L, Zhang X, Song J, Dong Y, Chen S, et al. 24-hour-restraint stress induces long-term depressive-like phenotypes in mice. Scientific Reports. 6: 32935. PMID 27609090 DOI: 10.1038/Srep32935 |
0.702 |
|
| 2016 |
Dong Y, Zhou Y, Chu X, Chen S, Chen L, Yang B, Zhang X, Wang L, Wang S, Lou J, Deng Q, Wang L, Cao Z, Wang J, Xie J, et al. Dental noise exposed mice display depressive-like phenotypes. Molecular Brain. 9: 50. PMID 27160396 DOI: 10.1186/S13041-016-0229-Z |
0.702 |
|
| 2014 |
Staudová B, Strouhal M, Zobaníková M, Cejková D, Fulton LL, Chen L, Giacani L, Centurion-Lara A, Bruisten SM, Sodergren E, Weinstock GM, Smajs D. Whole genome sequence of the Treponema pallidum subsp. endemicum strain Bosnia A: the genome is related to yaws treponemes but contains few loci similar to syphilis treponemes. Plos Neglected Tropical Diseases. 8: e3261. PMID 25375929 DOI: 10.1371/Journal.Pntd.0003261 |
0.423 |
|
| 2014 |
Zhou Y, Burnham CA, Hink T, Chen L, Shaikh N, Wollam A, Sodergren E, Weinstock GM, Tarr PI, Dubberke ER. Phenotypic and genotypic analysis of Clostridium difficile isolates: a single-center study. Journal of Clinical Microbiology. 52: 4260-6. PMID 25275005 DOI: 10.1128/Jcm.02115-14 |
0.434 |
|
| 2014 |
Chen K, Chen L, Fan X, Wallis J, Ding L, Weinstock G. TIGRA: a targeted iterative graph routing assembler for breakpoint assembly. Genome Research. 24: 310-7. PMID 24307552 DOI: 10.1101/Gr.162883.113 |
0.412 |
|
| 2013 |
Zobaníková M, Strouhal M, Mikalová L, Cejková D, Ambrožová L, Pospíšilová P, Fulton LL, Chen L, Sodergren E, Weinstock GM, Smajs D. Whole genome sequence of the Treponema Fribourg-Blanc: unspecified simian isolate is highly similar to the yaws subspecies. Plos Neglected Tropical Diseases. 7: e2172. PMID 23638193 DOI: 10.1371/Journal.Pntd.0002172 |
0.419 |
|
| 2012 |
Zobaníková M, Mikolka P, Cejková D, Pospíšilová P, Chen L, Strouhal M, Qin X, Weinstock GM, Smajs D. Complete genome sequence of Treponema pallidum strain DAL-1. Standards in Genomic Sciences. 7: 12-21. PMID 23449808 DOI: 10.4056/Sigs.2615838 |
0.564 |
|
| 2012 |
Pětrošová H, Zobaníková M, Čejková D, Mikalová L, Pospíšilová P, Strouhal M, Chen L, Qin X, Muzny DM, Weinstock GM, Šmajs D. Whole genome sequence of Treponema pallidum ssp. pallidum, strain Mexico A, suggests recombination between yaws and syphilis strains. Plos Neglected Tropical Diseases. 6: e1832. PMID 23029591 DOI: 10.1371/Journal.Pntd.0001832 |
0.549 |
|
| 2012 |
Cejková D, Zobaníková M, Chen L, Pospíšilová P, Strouhal M, Qin X, Mikalová L, Norris SJ, Muzny DM, Gibbs RA, Fulton LL, Sodergren E, Weinstock GM, Smajs D. Whole genome sequences of three Treponema pallidum ssp. pertenue strains: yaws and syphilis treponemes differ in less than 0.2% of the genome sequence. Plos Neglected Tropical Diseases. 6: e1471. PMID 22292095 DOI: 10.1371/Journal.Pntd.0001471 |
0.563 |
|
| 2011 |
Renfree MB, Papenfuss AT, Deakin JE, Lindsay J, Heider T, Belov K, Rens W, Waters PD, Pharo EA, Shaw G, Wong ES, Lefèvre CM, Nicholas KR, Kuroki Y, Wakefield MJ, ... ... Chen L, et al. Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development. Genome Biology. 12: R81. PMID 21854559 DOI: 10.1186/Gb-2011-12-8-R81 |
0.421 |
|
| 2011 |
Šmajs D, Zobaníková M, Strouhal M, Čejková D, Dugan-Rocha S, Pospíšilová P, Norris SJ, Albert T, Qin X, Hallsworth-Pepin K, Buhay C, Muzny DM, Chen L, Gibbs RA, Weinstock GM. Complete genome sequence of Treponema paraluiscuniculi, strain Cuniculi A: the loss of infectivity to humans is associated with genome decay. Plos One. 6: e20415. PMID 21655244 DOI: 10.1371/Journal.Pone.0020415 |
0.563 |
|
| 2011 |
Ye L, Hillier LW, Minx P, Thane N, Locke DP, Martin JC, Chen L, Mitreva M, Miller JR, Haub KV, Dooling DJ, Mardis ER, Wilson RK, Weinstock GM, Warren WC. A vertebrate case study of the quality of assemblies derived from next-generation sequences. Genome Biology. 12: R31. PMID 21453517 DOI: 10.1186/Gb-2011-12-3-R31 |
0.403 |
|
| 2010 |
Nelson KE, Weinstock GM, Highlander SK, Worley KC, Creasy HH, Wortman JR, Rusch DB, Mitreva M, Sodergren E, Chinwalla AT, Feldgarden M, Gevers D, Haas BJ, Madupu R, ... ... Chen L, et al. A catalog of reference genomes from the human microbiome. Science (New York, N.Y.). 328: 994-9. PMID 20489017 DOI: 10.1126/Science.1183605 |
0.563 |
|
| 2010 |
Ding L, Ellis MJ, Li S, Larson DE, Chen K, Wallis JW, Harris CC, McLellan MD, Fulton RS, Fulton LL, Abbott RM, Hoog J, Dooling DJ, Koboldt DC, Schmidt H, ... ... Chen L, et al. Genome remodelling in a basal-like breast cancer metastasis and xenograft. Nature. 464: 999-1005. PMID 20393555 DOI: 10.1038/Nature08989 |
0.383 |
|
| 2010 |
Shen Y, Wan Z, Coarfa C, Drabek R, Chen L, Ostrowski EA, Liu Y, Weinstock GM, Wheeler DA, Gibbs RA, Yu F. A SNP discovery method to assess variant allele probability from next-generation resequencing data. Genome Research. 20: 273-80. PMID 20019143 DOI: 10.1101/Gr.096388.109 |
0.383 |
|
| 2008 |
Bourgogne A, Garsin DA, Qin X, Singh KV, Sillanpaa J, Yerrapragada S, Ding Y, Dugan-Rocha S, Buhay C, Shen H, Chen G, Williams G, Muzny D, Maadani A, Fox KA, ... ... Chen L, et al. Large scale variation in Enterococcus faecalis illustrated by the genome analysis of strain OG1RF. Genome Biology. 9: R110. PMID 18611278 DOI: 10.1186/Gb-2008-9-7-R110 |
0.556 |
|
| 2008 |
Wheeler DA, Srinivasan M, Egholm M, Shen Y, Chen L, McGuire A, He W, Chen YJ, Makhijani V, Roth GT, Gomes X, Tartaro K, Niazi F, Turcotte CL, Irzyk GP, et al. The complete genome of an individual by massively parallel DNA sequencing. Nature. 452: 872-6. PMID 18421352 DOI: 10.1038/Nature06884 |
0.557 |
|
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