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Andreas Handel, Ph.D. - Publications

Affiliations: 
2004 Georgia Institute of Technology, Atlanta, GA 
Area:
General Physics
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28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Moore JR, Ahmed H, Manicassamy B, Garcia-Sastre A, Handel A, Antia R. Varying Inoculum Dose to Assess the Roles of the Immune Response and Target Cell Depletion by the Pathogen in Control of Acute Viral Infections. Bulletin of Mathematical Biology. 82: 35. PMID 32125535 DOI: 10.1007/S11538-020-00711-4  0.344
2019 Wu T, Guan J, Handel A, Tscharke DC, Sidney J, Sette A, Wakim LM, Sng XYX, Thomas PG, Croft NP, Purcell AW, La Gruta NL. Quantification of epitope abundance reveals the effect of direct and cross-presentation on influenza CTL responses. Nature Communications. 10: 2846. PMID 31253788 DOI: 10.1038/S41467-019-10661-8  0.303
2018 Zarnitsyna VI, Bulusheva I, Handel A, Longini IM, Halloran ME, Antia R. Intermediate levels of vaccination coverage may minimize seasonal influenza outbreaks. Plos One. 13: e0199674. PMID 29944709 DOI: 10.1371/Journal.Pone.0199674  0.301
2018 Handel A, Liao LE, Beauchemin CAA. Progress and trends in mathematical modelling of influenza A virus infections Current Opinion in Systems Biology. 12: 30-36. DOI: 10.1016/J.Coisb.2018.08.009  0.338
2016 Lipsitch M, Barclay W, Raman R, Russell CJ, Belser JA, Cobey S, Kasson PM, Lloyd-Smith JO, Maurer-Stroh S, Riley S, Beauchemin CA, Bedford T, Friedrich TC, Handel A, Herfst S, et al. Viral factors in influenza pandemic risk assessment. Elife. 5. PMID 27834632 DOI: 10.7554/Elife.18491  0.301
2016 Zarnitsyna VI, Handel A, McMaster SR, Hayward SL, Kohlmeier JE, Antia R. Mathematical Model Reveals the Role of Memory CD8 T Cell Populations in Recall Responses to Influenza. Frontiers in Immunology. 7: 165. PMID 27242779 DOI: 10.3389/Fimmu.2016.00165  0.326
2016 Pawelek KA, Dor D, Salmeron C, Handel A. Within-Host Models of High and Low Pathogenic Influenza Virus Infections: The Role of Macrophages. Plos One. 11: e0150568. PMID 26918620 DOI: 10.1371/Journal.Pone.0150568  0.331
2015 Handel A, Rohani P. Crossing the scale from within-host infection dynamics to between-host transmission fitness: a discussion of current assumptions and knowledge. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 370. PMID 26150668 DOI: 10.1098/Rstb.2014.0302  0.308
2015 Bird NL, Olson MR, Hurt AC, Oshansky CM, Oh DY, Reading PC, Chua BY, Sun Y, Tang L, Handel A, Jackson DC, Turner SJ, Thomas PG, Kedzierska K. Oseltamivir Prophylaxis Reduces Inflammation and Facilitates Establishment of Cross-Strain Protective T Cell Memory to Influenza Viruses. Plos One. 10: e0129768. PMID 26086392 DOI: 10.1371/Journal.Pone.0129768  0.308
2014 Handel A, Lebarbenchon C, Stallknecht D, Rohani P. Trade-offs between and within scales: environmental persistence and within-host fitness of avian influenza viruses. Proceedings. Biological Sciences / the Royal Society. 281. PMID 24898369 DOI: 10.1098/Rspb.2013.3051  0.317
2014 Cukalac T, Chadderton J, Handel A, Doherty PC, Turner SJ, Thomas PG, La Gruta NL. Reproducible selection of high avidity CD8+ T-cell clones following secondary acute virus infection. Proceedings of the National Academy of Sciences of the United States of America. 111: 1485-90. PMID 24474775 DOI: 10.1073/Pnas.1323736111  0.316
2014 Li Y, Handel A. Modeling inoculum dose dependent patterns of acute virus infections. Journal of Theoretical Biology. 347: 63-73. PMID 24440713 DOI: 10.1016/J.Jtbi.2014.01.008  0.34
2014 Handel A, Akin V, Pilyugin SS, Zarnitsyna V, Antia R. How sticky should a virus be? The impact of virus binding and release on transmission fitness using influenza as an example. Journal of the Royal Society, Interface / the Royal Society. 11: 20131083. PMID 24430126 DOI: 10.1098/Rsif.2013.1083  0.329
2013 Handel A, Brown J, Stallknecht D, Rohani P. A multi-scale analysis of influenza A virus fitness trade-offs due to temperature-dependent virus persistence. Plos Computational Biology. 9: e1002989. PMID 23555223 DOI: 10.1371/Journal.Pcbi.1002989  0.327
2013 Thomas PG, Handel A, Doherty PC, La Gruta NL. Ecological analysis of antigen-specific CTL repertoires defines the relationship between naive and immune T-cell populations. Proceedings of the National Academy of Sciences of the United States of America. 110: 1839-44. PMID 23319654 DOI: 10.1073/Pnas.1222149110  0.308
2012 Jackwood MW, Hall D, Handel A. Molecular evolution and emergence of avian gammacoronaviruses. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 12: 1305-11. PMID 22609285 DOI: 10.1016/J.Meegid.2012.05.003  0.312
2011 Beauchemin CA, Handel A. A review of mathematical models of influenza A infections within a host or cell culture: lessons learned and challenges ahead. Bmc Public Health. 11: S7. PMID 21356136 DOI: 10.1186/1471-2458-11-S1-S7  0.35
2010 Handel A, Longini IM, Antia R. Towards a quantitative understanding of the within-host dynamics of influenza A infections. Journal of the Royal Society, Interface / the Royal Society. 7: 35-47. PMID 19474085 DOI: 10.1098/Rsif.2009.0067  0.354
2009 Handel A, Longini IM, Antia R. Intervention strategies for an influenza pandemic taking into account secondary bacterial infections. Epidemics. 1: 185-95. PMID 20161493 DOI: 10.1016/J.Epidem.2009.09.001  0.337
2009 Handel A, Longini IM, Antia R. Antiviral resistance and the control of pandemic influenza: the roles of stochasticity, evolution and model details. Journal of Theoretical Biology. 256: 117-25. PMID 18952105 DOI: 10.1016/J.Jtbi.2008.09.021  0.318
2009 Handel A, Yates A, Pilyugin SS, Antia R. Sharing the burden: antigen transport and firebreaks in immune responses. Journal of the Royal Society, Interface / the Royal Society. 6: 447-54. PMID 18708323 DOI: 10.1098/Rsif.2008.0258  0.332
2008 Grigoriev RO, Handel A. Localized Control of Spatiotemporal Chaos Handbook of Chaos Control: Second Edition. 159-180. DOI: 10.1002/9783527622313.ch8  0.588
2007 Handel A, Longini IM, Antia R. Neuraminidase inhibitor resistance in influenza: assessing the danger of its generation and spread. Plos Computational Biology. 3: e240. PMID 18069885 DOI: 10.1371/Journal.Pcbi.0030240  0.32
2007 Handel A, Longini IM, Antia R. What is the best control strategy for multiple infectious disease outbreaks? Proceedings. Biological Sciences / the Royal Society. 274: 833-7. PMID 17251095 DOI: 10.1098/Rspb.2006.0015  0.33
2006 Handel A, Grigoriev RO. Transient dynamics and nonlinear stability of spatially extended systems. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 74: 036302. PMID 17025738 DOI: 10.1103/Physreve.74.036302  0.623
2005 Handel A, Grigoriev RO. Pattern selection and control via localized feedback. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 72: 066208. PMID 16486041 DOI: 10.1103/Physreve.72.066208  0.628
2002 Grigoriev RO, Handel A. Non-normality and the localized control of extended systems. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 66: 067201. PMID 12513447 DOI: 10.1103/Physreve.66.067201  0.639
2002 Grigoriev RO, Handel A. Spectral theory for the failure of linear control in a nonlinear stochastic system. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 66: 065301. PMID 12513339 DOI: 10.1103/Physreve.66.065301  0.623
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