Junmin Peng - Publications

Biological and Biomedical Sciences Emory University, Atlanta, GA 
Neuroscience Biology, Pharmacology, Pathology, Molecular Biology

67 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Gillies J, Hickey CM, Su D, Wu Z, Peng J, Hochstrasser M. SUMO Pathway Modulation of Regulatory Protein Binding at the Ribosomal DNA Locus in Saccharomyces cerevisiae. Genetics. PMID 26837752 DOI: 10.1534/Genetics.116.187252  0.32
2015 Mertz J, Tan H, Pagala V, Bai B, Chen PC, Li Y, Cho JH, Shaw T, Wang X, Peng J. Sequential Elution Interactome Analysis of the Mind Bomb 1 Ubiquitin Ligase Reveals a Novel Role in Dendritic Spine Outgrowth. Molecular & Cellular Proteomics : McP. 14: 1898-910. PMID 25931508 DOI: 10.1074/Mcp.M114.045898  0.32
2015 Pagala VR, High AA, Wang X, Tan H, Kodali K, Mishra A, Kavdia K, Xu Y, Wu Z, Peng J. Quantitative protein analysis by mass spectrometry. Methods in Molecular Biology (Clifton, N.J.). 1278: 281-305. PMID 25859956 DOI: 10.1007/978-1-4939-2425-7_17  0.32
2014 Wu Z, Na CH, Tan H, Peng J. Global ubiquitination analysis by SILAC in mammalian cells. Methods in Molecular Biology (Clifton, N.J.). 1188: 149-60. PMID 25059610 DOI: 10.1007/978-1-4939-1142-4_11  0.32
2014 Bai B, Chen PC, Hales CM, Wu Z, Pagala V, High AA, Levey AI, Lah JJ, Peng J. Integrated approaches for analyzing U1-70K cleavage in Alzheimer's disease. Journal of Proteome Research. 13: 4526-34. PMID 24902715 DOI: 10.1021/Pr5003593  0.32
2014 Xu Y, Gao XD, Lee JH, Huang H, Tan H, Ahn J, Reinke LM, Peter ME, Feng Y, Gius D, Siziopikou KP, Peng J, Xiao X, Cheng C. Cell type-restricted activity of hnRNPM promotes breast cancer metastasis via regulating alternative splicing. Genes & Development. 28: 1191-203. PMID 24840202 DOI: 10.1101/gad.241968.114  0.32
2014 Jacobson AD, MacFadden A, Wu Z, Peng J, Liu CW. Autoregulation of the 26S proteasome by in situ ubiquitination. Molecular Biology of the Cell. 25: 1824-35. PMID 24743594 DOI: 10.1091/Mbc.E13-10-0585  0.32
2014 Jones DR, Wu Z, Chauhan D, Anderson KC, Peng J. A nano ultra-performance liquid chromatography-high resolution mass spectrometry approach for global metabolomic profiling and case study on drug-resistant multiple myeloma. Analytical Chemistry. 86: 3667-75. PMID 24611431 DOI: 10.1021/Ac500476A  0.32
2014 Long L, Thelen JP, Furgason M, Haj-Yahya M, Brik A, Cheng D, Peng J, Yao T. The U4/U6 recycling factor SART3 has histone chaperone activity and associates with USP15 to regulate H2B deubiquitination. The Journal of Biological Chemistry. 289: 8916-30. PMID 24526689 DOI: 10.1074/jbc.M114.551754  0.32
2014 Elias A, High AA, Mishra A, Ong SS, Wu J, Peng J, Chen T. Identification and characterization of phosphorylation sites within the pregnane X receptor protein. Biochemical Pharmacology. 87: 360-70. PMID 24184507 DOI: 10.1016/j.bcp.2013.10.015  0.32
2013 Bai B, Hales CM, Chen PC, Gozal Y, Dammer EB, Fritz JJ, Wang X, Xia Q, Duong DM, Street C, Cantero G, Cheng D, Jones DR, Wu Z, Li Y, ... ... Peng J, et al. U1 small nuclear ribonucleoprotein complex and RNA splicing alterations in Alzheimer's disease. Proceedings of the National Academy of Sciences of the United States of America. 110: 16562-7. PMID 24023061 DOI: 10.1073/Pnas.1310249110  0.32
2013 Shu C, Sankaran B, Chaton CT, Herr AB, Mishra A, Peng J, Li P. Structural insights into the functions of TBK1 in innate antimicrobial immunity. Structure (London, England : 1993). 21: 1137-48. PMID 23746807 DOI: 10.1016/J.Str.2013.04.025  0.32
2013 Zhou J, Jones DR, Duong DM, Levey AI, Lah JJ, Peng J. Proteomic analysis of postsynaptic density in Alzheimer's disease. Clinica Chimica Acta; International Journal of Clinical Chemistry. 420: 62-8. PMID 23537733 DOI: 10.1016/J.Cca.2013.03.016  0.32
2013 Willmund F, del Alamo M, Pechmann S, Chen T, Albanèse V, Dammer EB, Peng J, Frydman J. The cotranslational function of ribosome-associated Hsp70 in eukaryotic protein homeostasis. Cell. 152: 196-209. PMID 23332755 DOI: 10.1016/J.Cell.2012.12.001  0.32
2013 Liang C, Xiong K, Szulwach KE, Zhang Y, Wang Z, Peng J, Fu M, Jin P, Suzuki HI, Liu Q. Sjogren syndrome antigen B (SSB)/La promotes global microRNA expression by binding microRNA precursors through stem-loop recognition. The Journal of Biological Chemistry. 288: 723-36. PMID 23129761 DOI: 10.1074/jbc.M112.401323  0.32
2012 Yang Y, Duguay D, Bédard N, Rachalski A, Baquiran G, Na CH, Fahrenkrug J, Storch KF, Peng J, Wing SS, Cermakian N. Regulation of behavioral circadian rhythms and clock protein PER1 by the deubiquitinating enzyme USP2. Biology Open. 1: 789-801. PMID 23213472 DOI: 10.1242/Bio.20121990  0.32
2012 Han KJ, Foster DG, Zhang NY, Kanisha K, Dzieciatkowska M, Sclafani RA, Hansen KC, Peng J, Liu CW. Ubiquitin-specific protease 9x deubiquitinates and stabilizes the spinal muscular atrophy protein-survival motor neuron. The Journal of Biological Chemistry. 287: 43741-52. PMID 23112048 DOI: 10.1074/Jbc.M112.372318  0.32
2012 Lu Y, Li J, Cheng D, Parameswaran B, Zhang S, Jiang Z, Yew PR, Peng J, Ye Q, Hu Y. The F-box protein FBXO44 mediates BRCA1 ubiquitination and degradation. The Journal of Biological Chemistry. 287: 41014-22. PMID 23086937 DOI: 10.1074/jbc.M112.407106  0.32
2012 Kraner SD, Novak KR, Wang Q, Peng J, Rich MM. Altered sodium channel-protein associations in critical illness myopathy. Skeletal Muscle. 2: 17. PMID 22935229 DOI: 10.1186/2044-5040-2-17  0.32
2012 Xu P, Tan H, Duong DM, Yang Y, Kupsco J, Moberg KH, Li H, Jin P, Peng J. Stable isotope labeling with amino acids in Drosophila for quantifying proteins and modifications. Journal of Proteome Research. 11: 4403-12. PMID 22830426 DOI: 10.1021/pr300613c  0.32
2012 Dammer EB, Fallini C, Gozal YM, Duong DM, Rossoll W, Xu P, Lah JJ, Levey AI, Peng J, Bassell GJ, Seyfried NT. Coaggregation of RNA-binding proteins in a model of TDP-43 proteinopathy with selective RGG motif methylation and a role for RRM1 ubiquitination. Plos One. 7: e38658. PMID 22761693 DOI: 10.1371/Journal.Pone.0038658  0.32
2012 Bustos D, Bakalarski CE, Yang Y, Peng J, Kirkpatrick DS. Characterizing ubiquitination sites by peptide-based immunoaffinity enrichment. Molecular & Cellular Proteomics : McP. 11: 1529-40. PMID 22729469 DOI: 10.1074/Mcp.R112.019117  0.32
2012 Herskowitz JH, Gozal YM, Duong DM, Dammer EB, Gearing M, Ye K, Lah JJ, Peng J, Levey AI, Seyfried NT. Asparaginyl endopeptidase cleaves TDP-43 in brain. Proteomics. 12: 2455-63. PMID 22718532 DOI: 10.1002/Pmic.201200006  0.32
2012 Seyfried NT, Gozal YM, Donovan LE, Herskowitz JH, Dammer EB, Xia Q, Ku L, Chang J, Duong DM, Rees HD, Cooper DS, Glass JD, Gearing M, Tansey MG, Lah JJ, ... ... Peng J, et al. Quantitative analysis of the detergent-insoluble brain proteome in frontotemporal lobar degeneration using SILAC internal standards. Journal of Proteome Research. 11: 2721-38. PMID 22416763 DOI: 10.1021/Pr2010814  0.32
2012 Felberbaum R, Wilson NR, Cheng D, Peng J, Hochstrasser M. Desumoylation of the endoplasmic reticulum membrane VAP family protein Scs2 by Ulp1 and SUMO regulation of the inositol synthesis pathway. Molecular and Cellular Biology. 32: 64-75. PMID 22025676 DOI: 10.1128/Mcb.05878-11  0.32
2011 Gozal YM, Seyfried NT, Gearing M, Glass JD, Heilman CJ, Wuu J, Duong DM, Cheng D, Xia Q, Rees HD, Fritz JJ, Cooper DS, Peng J, Levey AI, Lah JJ. Aberrant septin 11 is associated with sporadic frontotemporal lobar degeneration. Molecular Neurodegeneration. 6: 82. PMID 22126117 DOI: 10.1186/1750-1326-6-82  0.32
2011 Scaglione KM, Zavodszky E, Todi SV, Patury S, Xu P, Rodríguez-Lebrón E, Fischer S, Konen J, Djarmati A, Peng J, Gestwicki JE, Paulson HL. Ube2w and ataxin-3 coordinately regulate the ubiquitin ligase CHIP. Molecular Cell. 43: 599-612. PMID 21855799 DOI: 10.1016/J.Molcel.2011.05.036  0.32
2011 Kalinina J, Peng J, Ritchie JC, Van Meir EG. Proteomics of gliomas: initial biomarker discovery and evolution of technology. Neuro-Oncology. 13: 926-42. PMID 21852429 DOI: 10.1093/Neuonc/Nor078  0.32
2011 Gozal YM, Dammer EB, Duong DM, Cheng D, Gearing M, Rees HD, Peng J, Lah JJ, Levey AI. Proteomic analysis of hippocampal dentate granule cells in frontotemporal lobar degeneration: application of laser capture technology. Frontiers in Neurology. 2: 24. PMID 21577247 DOI: 10.3389/Fneur.2011.00024  0.32
2011 Chang Y, Levy D, Horton JR, Peng J, Zhang X, Gozani O, Cheng X. Structural basis of SETD6-mediated regulation of the NF-kB network via methyl-lysine signaling. Nucleic Acids Research. 39: 6380-9. PMID 21515635 DOI: 10.1093/Nar/Gkr256  0.32
2011 Kraner SD, Wang Q, Novak KR, Cheng D, Cool DR, Peng J, Rich MM. Upregulation of the CaV 1.1-ryanodine receptor complex in a rat model of critical illness myopathy. American Journal of Physiology. Regulatory, Integrative and Comparative Physiology. 300: R1384-91. PMID 21474431 DOI: 10.1152/ajpregu.00032.2011  0.32
2011 Dammer EB, Na CH, Xu P, Seyfried NT, Duong DM, Cheng D, Gearing M, Rees H, Lah JJ, Levey AI, Rush J, Peng J. Polyubiquitin linkage profiles in three models of proteolytic stress suggest the etiology of Alzheimer disease. The Journal of Biological Chemistry. 286: 10457-65. PMID 21278249 DOI: 10.1074/Jbc.M110.149633  0.32
2011 Bedford L, Layfield R, Mayer RJ, Peng J, Xu P. Diverse polyubiquitin chains accumulate following 26S proteasomal dysfunction in mammalian neurones. Neuroscience Letters. 491: 44-7. PMID 21215295 DOI: 10.1016/J.Neulet.2010.12.064  0.32
2011 Herskowitz JH, Seyfried NT, Gearing M, Kahn RA, Peng J, Levey AI, Lah JJ. Rho kinase II phosphorylation of the lipoprotein receptor LR11/SORLA alters amyloid-beta production. The Journal of Biological Chemistry. 286: 6117-27. PMID 21147781 DOI: 10.1074/Jbc.M110.167239  0.32
2011 Franco M, Seyfried NT, Brand AH, Peng J, Mayor U. A novel strategy to isolate ubiquitin conjugates reveals wide role for ubiquitination during neural development. Molecular & Cellular Proteomics : McP. 10: M110.002188. PMID 20861518 DOI: 10.1074/Mcp.M110.002188  0.32
2010 Dammer E, Peng J. At the crossroads of ubiquitin signaling and mass spectrometry. Expert Review of Proteomics. 7: 643-5. PMID 20973637 DOI: 10.1586/epr.10.90  0.4
2010 Herskowitz JH, Seyfried NT, Duong DM, Xia Q, Rees HD, Gearing M, Peng J, Lah JJ, Levey AI. Phosphoproteomic analysis reveals site-specific changes in GFAP and NDRG2 phosphorylation in frontotemporal lobar degeneration. Journal of Proteome Research. 9: 6368-79. PMID 20886841 DOI: 10.1021/Pr100666C  0.32
2010 Zhou JY, Afjehi-Sadat L, Asress S, Duong DM, Cudkowicz M, Glass JD, Peng J. Galectin-3 is a candidate biomarker for amyotrophic lateral sclerosis: discovery by a proteomics approach. Journal of Proteome Research. 9: 5133-41. PMID 20698585 DOI: 10.1021/pr100409r  0.32
2010 Fang R, Barbera AJ, Xu Y, Rutenberg M, Leonor T, Bi Q, Lan F, Mei P, Yuan GC, Lian C, Peng J, Cheng D, Sui G, Kaiser UB, Shi Y, et al. Human LSD2/KDM1b/AOF1 regulates gene transcription by modulating intragenic H3K4me2 methylation. Molecular Cell. 39: 222-33. PMID 20670891 DOI: 10.1016/J.Molcel.2010.07.008  0.32
2010 Smrt RD, Szulwach KE, Pfeiffer RL, Li X, Guo W, Pathania M, Teng ZQ, Luo Y, Peng J, Bordey A, Jin P, Zhao X. MicroRNA miR-137 regulates neuronal maturation by targeting ubiquitin ligase mind bomb-1. Stem Cells (Dayton, Ohio). 28: 1060-70. PMID 20506192 DOI: 10.1002/Stem.431  0.32
2010 Jiang H, Cheng D, Liu W, Peng J, Feng J. Protein kinase C inhibits autophagy and phosphorylates LC3. Biochemical and Biophysical Research Communications. 395: 471-6. PMID 20398630 DOI: 10.1016/j.bbrc.2010.04.030  0.32
2010 Bingol B, Wang CF, Arnott D, Cheng D, Peng J, Sheng M. Autophosphorylated CaMKIIalpha acts as a scaffold to recruit proteasomes to dendritic spines. Cell. 140: 567-78. PMID 20178748 DOI: 10.1016/j.cell.2010.01.024  0.32
2010 Liu C, van Dyk D, Xu P, Choe V, Pan H, Peng J, Andrews B, Rao H. Ubiquitin chain elongation enzyme Ufd2 regulates a subset of Doa10 substrates. The Journal of Biological Chemistry. 285: 10265-72. PMID 20159987 DOI: 10.1074/Jbc.M110.110551  0.32
2010 Seyfried NT, Gozal YM, Dammer EB, Xia Q, Duong DM, Cheng D, Lah JJ, Levey AI, Peng J. Multiplex SILAC analysis of a cellular TDP-43 proteinopathy model reveals protein inclusions associated with SUMOylation and diverse polyubiquitin chains. Molecular & Cellular Proteomics : McP. 9: 705-18. PMID 20047951 DOI: 10.1074/Mcp.M800390-Mcp200  0.32
2009 Jacobson AD, Zhang NY, Xu P, Han KJ, Noone S, Peng J, Liu CW. The lysine 48 and lysine 63 ubiquitin conjugates are processed differently by the 26 s proteasome. The Journal of Biological Chemistry. 284: 35485-94. PMID 19858201 DOI: 10.1074/Jbc.M109.052928  0.32
2009 Gozal YM, Duong DM, Gearing M, Cheng D, Hanfelt JJ, Funderburk C, Peng J, Lah JJ, Levey AI. Proteomics analysis reveals novel components in the detergent-insoluble subproteome in Alzheimer's disease. Journal of Proteome Research. 8: 5069-79. PMID 19746990 DOI: 10.1021/Pr900474T  0.32
2009 Liu Y, Ye X, Jiang F, Liang C, Chen D, Peng J, Kinch LN, Grishin NV, Liu Q. C3PO, an endoribonuclease that promotes RNAi by facilitating RISC activation. Science (New York, N.Y.). 325: 750-3. PMID 19661431 DOI: 10.1126/Science.1176325  0.32
2009 Xu P, Duong DM, Seyfried NT, Cheng D, Xie Y, Robert J, Rush J, Hochstrasser M, Finley D, Peng J. Quantitative proteomics reveals the function of unconventional ubiquitin chains in proteasomal degradation. Cell. 137: 133-45. PMID 19345192 DOI: 10.1016/J.Cell.2009.01.041  0.32
2009 Mastroberardino PG, Hoffman EK, Horowitz MP, Betarbet R, Taylor G, Cheng D, Na HM, Gutekunst CA, Gearing M, Trojanowski JQ, Anderson M, Chu CT, Peng J, Greenamyre JT. A novel transferrin/TfR2-mediated mitochondrial iron transport system is disrupted in Parkinson's disease. Neurobiology of Disease. 34: 417-31. PMID 19250966 DOI: 10.1016/J.Nbd.2009.02.009  0.32
2009 Edbauer D, Cheng D, Batterton MN, Wang CF, Duong DM, Yaffe MB, Peng J, Sheng M. Identification and characterization of neuronal mitogen-activated protein kinase substrates using a specific phosphomotif antibody. Molecular & Cellular Proteomics : McP. 8: 681-95. PMID 19054758 DOI: 10.1074/Mcp.M800233-Mcp200  0.32
2008 Dodson SE, Andersen OM, Karmali V, Fritz JJ, Cheng D, Peng J, Levey AI, Willnow TE, Lah JJ. Loss of LR11/SORLA enhances early pathology in a mouse model of amyloidosis: evidence for a proximal role in Alzheimer's disease. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 28: 12877-86. PMID 19036982 DOI: 10.1523/Jneurosci.4582-08.2008  0.32
2008 Winborn BJ, Travis SM, Todi SV, Scaglione KM, Xu P, Williams AJ, Cohen RE, Peng J, Paulson HL. The deubiquitinating enzyme ataxin-3, a polyglutamine disease protein, edits Lys63 linkages in mixed linkage ubiquitin chains. The Journal of Biological Chemistry. 283: 26436-43. PMID 18599482 DOI: 10.1074/jbc.M803692200  0.32
2008 Varghese B, Barriere H, Carbone CJ, Banerjee A, Swaminathan G, Plotnikov A, Xu P, Peng J, Goffin V, Lukacs GL, Fuchs SY. Polyubiquitination of prolactin receptor stimulates its internalization, postinternalization sorting, and degradation via the lysosomal pathway. Molecular and Cellular Biology. 28: 5275-87. PMID 18573876 DOI: 10.1128/Mcb.00350-08  0.32
2008 Xia Q, Cheng D, Duong DM, Gearing M, Lah JJ, Levey AI, Peng J. Phosphoproteomic analysis of human brain by calcium phosphate precipitation and mass spectrometry. Journal of Proteome Research. 7: 2845-51. PMID 18510355 DOI: 10.1021/Pr8000496  0.32
2008 Xia Q, Liao L, Cheng D, Duong DM, Gearing M, Lah JJ, Levey AI, Peng J. Proteomic identification of novel proteins associated with Lewy bodies. Frontiers in Bioscience : a Journal and Virtual Library. 13: 3850-6. PMID 18508479 DOI: 10.2741/2973  0.32
2008 Seyfried NT, Xu P, Duong DM, Cheng D, Hanfelt J, Peng J. Systematic approach for validating the ubiquitinated proteome. Analytical Chemistry. 80: 4161-9. PMID 18433149 DOI: 10.1021/Ac702516A  0.32
2008 Peng J. Evaluation of proteomic strategies for analyzing ubiquitinated proteins. Bmb Reports. 41: 177-83. PMID 18377720  0.32
2008 Ramesh Babu J, Lamar Seibenhener M, Peng J, Strom AL, Kemppainen R, Cox N, Zhu H, Wooten MC, Diaz-Meco MT, Moscat J, Wooten MW. Genetic inactivation of p62 leads to accumulation of hyperphosphorylated tau and neurodegeneration. Journal of Neurochemistry. 106: 107-20. PMID 18346206 DOI: 10.1111/J.1471-4159.2008.05340.X  0.32
2008 Wooten MW, Geetha T, Babu JR, Seibenhener ML, Peng J, Cox N, Diaz-Meco MT, Moscat J. Essential role of sequestosome 1/p62 in regulating accumulation of Lys63-ubiquitinated proteins. The Journal of Biological Chemistry. 283: 6783-9. PMID 18174161 DOI: 10.1074/Jbc.M709496200  0.32
2008 Peng J. Proteome Analysis of the Ubiquitin Pathway Plant Proteomics: Technologies, Strategies, and Applications. 443-453. DOI: 10.1002/9780470369630.ch30  0.32
2007 Kumar KG, Barriere H, Carbone CJ, Liu J, Swaminathan G, Xu P, Li Y, Baker DP, Peng J, Lukacs GL, Fuchs SY. Site-specific ubiquitination exposes a linear motif to promote interferon-alpha receptor endocytosis. The Journal of Cell Biology. 179: 935-50. PMID 18056411 DOI: 10.1083/Jcb.200706034  0.32
2007 Bowzard JB, Cheng D, Peng J, Kahn RA. ELMOD2 is an Arl2 GTPase-activating protein that also acts on Arfs. The Journal of Biological Chemistry. 282: 17568-80. PMID 17452337 DOI: 10.1074/Jbc.M701347200  0.32
2006 Gozal YM, Cheng D, Duong DM, Lah JJ, Levey AI, Peng J. Merger of laser capture microdissection and mass spectrometry: a window into the amyloid plaque proteome. Methods in Enzymology. 412: 77-93. PMID 17046653 DOI: 10.1016/S0076-6879(06)12006-6  0.32
2006 Ahn JY, Liu X, Liu Z, Pereira L, Cheng D, Peng J, Wade PA, Hamburger AW, Ye K. Nuclear Akt associates with PKC-phosphorylated Ebp1, preventing DNA fragmentation by inhibition of caspase-activated DNase. The Embo Journal. 25: 2083-95. PMID 16642037 DOI: 10.1038/sj.emboj.7601111  0.32
2006 Cheng D, Hoogenraad CC, Rush J, Ramm E, Schlager MA, Duong DM, Xu P, Wijayawardana SR, Hanfelt J, Nakagawa T, Sheng M, Peng J. Relative and absolute quantification of postsynaptic density proteome isolated from rat forebrain and cerebellum. Molecular & Cellular Proteomics : McP. 5: 1158-70. PMID 16507876 DOI: 10.1074/Mcp.D500009-Mcp200  0.32
2004 Liao L, Cheng D, Wang J, Duong DM, Losik TG, Gearing M, Rees HD, Lah JJ, Levey AI, Peng J. Proteomic characterization of postmortem amyloid plaques isolated by laser capture microdissection. The Journal of Biological Chemistry. 279: 37061-8. PMID 15220353 DOI: 10.1074/Jbc.M403672200  0.32
2003 Peng J, Schwartz D, Elias JE, Thoreen CC, Cheng D, Marsischky G, Roelofs J, Finley D, Gygi SP. A proteomics approach to understanding protein ubiquitination. Nature Biotechnology. 21: 921-6. PMID 12872131 DOI: 10.1038/Nbt849  0.32
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