Year |
Citation |
Score |
2023 |
Cervantes M, Hess T, Morbioli GG, Sengar A, Kasson PM. The ACE2 receptor accelerates but is not biochemically required for SARS-CoV-2 membrane fusion. Chemical Science. 14: 6997-7004. PMID 37389252 DOI: 10.1039/d2sc06967a |
0.363 |
|
2023 |
Sengar A, Cervantes M, Bondalapati ST, Hess T, Kasson PM. Single-Virus Fusion Measurements Reveal Multiple Mechanistically Equivalent Pathways for SARS-CoV-2 Entry. Journal of Virology. 97: e0199222. PMID 37133381 DOI: 10.1128/jvi.01992-22 |
0.338 |
|
2022 |
Mannsverk S, Villamil Giraldo AM, Kasson PM. Influenza Virus Membrane Fusion Is Promoted by the Endosome-Resident Phospholipid Bis(monoacylglycero)phosphate. The Journal of Physical Chemistry. B. PMID 36468619 DOI: 10.1021/acs.jpcb.2c06642 |
0.399 |
|
2022 |
Villamil Giraldo AM, Mannsverk S, Kasson PM. Measuring single-virus fusion kinetics using an assay for nucleic acid exposure. Biophysical Journal. PMID 36330566 DOI: 10.1016/j.bpj.2022.11.002 |
0.363 |
|
2021 |
Tuerkova A, Kasson PM. Computational methods to study enveloped viral entry. Biochemical Society Transactions. 49: 2527-2537. PMID 34783344 DOI: 10.1042/BST20210190 |
0.352 |
|
2020 |
Haldar S, Okamoto K, Dunning RA, Kasson PM. Precise triggering and chemical control of single-virus fusion within endosomes. Journal of Virology. PMID 33115879 DOI: 10.1128/JVI.01982-20 |
0.425 |
|
2020 |
Villamil Giraldo AM, Kasson PM. Bilayer-Coated Nanoparticles Reveal How Influenza Viral Entry Depends on Membrane Deformability but Not Curvature. The Journal of Physical Chemistry Letters. 11: 7190-7196. PMID 32808796 DOI: 10.1021/Acs.Jpclett.0C01778 |
0.484 |
|
2020 |
Pabis A, Rawle RJ, Kasson PM. Influenza hemagglutinin drives viral entry via two sequential intramembrane mechanisms. Proceedings of the National Academy of Sciences of the United States of America. 117: 7200-7207. PMID 32188780 DOI: 10.1073/Pnas.1914188117 |
0.781 |
|
2020 |
Sengar A, Pompano RR, Kasson P. Differentiating Antibody Neutralisation Mechanisms using a Single Virus-Assay Biophysical Journal. 118: 552a. DOI: 10.1016/J.Bpj.2019.11.3018 |
0.316 |
|
2020 |
Villamil A, Kasson P. Membranes with Decreased Deformability to Study the Kinetics of Fusion Intermediates Biophysical Journal. 118: 226a. DOI: 10.1016/J.Bpj.2019.11.1339 |
0.403 |
|
2020 |
Balasubramanian V, Jensen T, Turilli M, Kasson P, Shirts M, Jha S. Adaptive Ensemble Biomolecular Applications at Scale Sn Computer Science. 1. DOI: 10.1007/s42979-020-0081-1 |
0.51 |
|
2019 |
Ferreira RJ, Kasson PM. Antibiotic uptake across gram-negative outer membranes: better predictions towards better antibiotics. Acs Infectious Diseases. PMID 31593635 DOI: 10.1021/Acsinfecdis.9B00201 |
0.408 |
|
2019 |
Rawle RJ, Villamil Giraldo AM, Boxer SG, Kasson PM. Detecting and Controlling Dye Effects in Single-Virus Fusion Experiments. Biophysical Journal. PMID 31326109 DOI: 10.1016/J.Bpj.2019.06.022 |
0.753 |
|
2019 |
Hays JM, Cafiso DS, Kasson PM. Hybrid Refinement of Heterogeneous Conformational Ensembles Using Spectroscopic Data. The Journal of Physical Chemistry Letters. 3410-3414. PMID 31181934 DOI: 10.1021/Acs.Jpclett.9B01407 |
0.31 |
|
2019 |
Pabis A, Kasson P. Atomic-Resolution Simulations Show Two Sequential Fusion Peptide Mechanisms in Influenza Membrane Fusion Biophysical Journal. 116: 368a. DOI: 10.1016/J.Bpj.2018.11.2000 |
0.432 |
|
2019 |
Sengar A, Rawle RJ, Pompano RR, Kasson P. Measuring Neutralization of Enveloped Viruses using Microfluidics Biophysical Journal. 116: 367a. DOI: 10.1016/J.Bpj.2018.11.1995 |
0.7 |
|
2019 |
Rawle RJ, Boxer SG, Kasson PM. Detecting and Controlling Dye and Illumination Effects in Single-Virus Fusion Experiments Biophysical Journal. 116: 181a. DOI: 10.1016/J.Bpj.2018.11.1006 |
0.702 |
|
2019 |
Villamil A, Kasson P. Probing Membrane Fusion Intermediates using Bilayer Coated Nanoparticles Biophysical Journal. 116: 180a. DOI: 10.1016/J.Bpj.2018.11.1002 |
0.336 |
|
2018 |
Cortina GA, Hays JM, Kasson PM. Conformational Intermediate That Controls KPC-2 Catalysis and Beta-Lactam Drug Resistance. Acs Catalysis. 8: 2741-2747. PMID 30637173 DOI: 10.1021/Acscatal.7B03832 |
0.65 |
|
2018 |
Rawle RJ, Webster ER, Jelen M, Kasson PM, Boxer SG. pH Dependence of Zika Membrane Fusion Kinetics Reveals an Off-Pathway State. Acs Central Science. 4: 1503-1510. PMID 30555902 DOI: 10.1021/Acscentsci.8B00494 |
0.75 |
|
2018 |
Hays JM, Kieber MK, Li JZ, Han JI, Columbus L, Kasson P. Refinement of highly flexible protein structures using simulation-guided spectroscopy. Angewandte Chemie (International Ed. in English). PMID 30395378 DOI: 10.1002/Anie.201810462 |
0.311 |
|
2018 |
Cortina GA, Kasson PM. Predicting allostery and microbial drug resistance with molecular simulations. Current Opinion in Structural Biology. 52: 80-86. PMID 30243041 DOI: 10.1016/J.Sbi.2018.09.001 |
0.63 |
|
2018 |
Liu Y, Osinski T, Wang F, Krupovic M, Schouten S, Kasson P, Prangishvili D, Egelman EH. Structural conservation in a membrane-enveloped filamentous virus infecting a hyperthermophilic acidophile. Nature Communications. 9: 3360. PMID 30135568 DOI: 10.1038/S41467-018-05684-6 |
0.461 |
|
2018 |
Irrgang ME, Hays JM, Kasson PM. gmxapi: a high-level interface for advanced control and extension of molecular dynamics simulations. Bioinformatics (Oxford, England). PMID 29912282 DOI: 10.1093/Bioinformatics/Bty484 |
0.311 |
|
2018 |
Goronzy IN, Rawle RJ, Boxer SG, Kasson PM. Cholesterol enhances influenza binding avidity by controlling nanoscale receptor clustering. Chemical Science. 9: 2340-2347. PMID 29520318 DOI: 10.1039/C7Sc03236F |
0.76 |
|
2018 |
Zawada KE, Okamoto K, Kasson PM. Influenza Hemifusion Phenotype Depends on Membrane Context: Differences in Cell-Cell and Virus-Cell Fusion. Journal of Molecular Biology. PMID 29355500 DOI: 10.1016/J.Jmb.2018.01.006 |
0.491 |
|
2018 |
Kasson P. Simulations and Experiments Show a Mechanistic Role for Influenza Fusion Peptides in Membrane Bending and Fusion Stoichiometry Biophysical Journal. 114: 605a. DOI: 10.1016/J.Bpj.2017.11.3307 |
0.451 |
|
2018 |
Rawle R, Webster E, Boxer S, Kasson P. Kinetic Models of Zika Virus Membrane Fusion Biophysical Journal. 114: 604a. DOI: 10.1016/J.Bpj.2017.11.3304 |
0.757 |
|
2018 |
Cortina GA, Kasson P. Identifying a Conformational Transition Critical for Carbapenem Drug Resistance Biophysical Journal. 114: 48a. DOI: 10.1016/J.Bpj.2017.11.313 |
0.603 |
|
2018 |
Webster ER, Rawle R, Kasson P, Boxer S. The Effect of pH on Single Virus Lipid Mixing Kinetics Biophysical Journal. 114: 391a. DOI: 10.1016/J.Bpj.2017.11.2165 |
0.72 |
|
2018 |
Nadine Goronzy I, Rawle R, Boxer S, Kasson P. Cholesterol-Induced Membrane Organization Promotes Influenza Virus Binding Biophysical Journal. 114: 379a. DOI: 10.1016/J.Bpj.2017.11.2100 |
0.749 |
|
2017 |
Latallo MJ, Cortina GA, Faham S, Nakamoto RK, Kasson PM. Predicting allosteric mutants that increase activity of a major antibiotic resistance enzyme. Chemical Science. 8: 6484-6492. PMID 28989673 DOI: 10.1039/C7Sc02676E |
0.633 |
|
2017 |
Egelman EH, Kasson PM, DiMaio F, Yu X, Lucas-Staat S, Krupovic M, Schouten S, Prangishvili D. Model for a novel membrane envelope in a filamentous hyperthermophilic virus. Elife. 6. PMID 28639939 DOI: 10.7554/Elife.26268 |
0.474 |
|
2017 |
Kasson P, DiMaio F, Yu X, Lucas-Staat S, Krupovic M, Schouten S, Prangishvili D, Egelman EH. Author response: Model for a novel membrane envelope in a filamentous hyperthermophilic virus Elife. DOI: 10.7554/Elife.26268.020 |
0.442 |
|
2017 |
Rawle RJ, Webster E, Goronzy I, Boxer S, Kasson P. Single-Virus Observation of pH-Triggered Zika Fusion in the Absence of a Cellular Receptor Biophysical Journal. 112: 80a. DOI: 10.1016/J.Bpj.2016.11.479 |
0.742 |
|
2017 |
Goronzy I, Rawle R, Kasson P, Boxer S. Influenza Binding Avidity Governed by Sterol-Dependent Ganglioside Dynamics Biophysical Journal. 112: 75a. DOI: 10.1016/J.Bpj.2016.11.452 |
0.755 |
|
2017 |
Cortina GA, Latallo MJ, Kasson PM. Predicting Residues that Increase Antibiotic Resistance of CTX-M9 Enzymes using Molecular Simulation and Statistical Learning Biophysical Journal. 112: 317a. DOI: 10.1016/J.Bpj.2016.11.1717 |
0.627 |
|
2017 |
Hays JM, Kieber M, Nyenhuis D, Columbus L, Cafiso D, Kasson P. Guiding Double Electron Electron Resonance Experiments using Information Theory and Molecular Dynamics Simulations Biophysical Journal. 112: 192a. DOI: 10.1016/J.Bpj.2016.11.1064 |
0.31 |
|
2016 |
Lipsitch M, Barclay W, Raman R, Russell CJ, Belser JA, Cobey S, Kasson PM, Lloyd-Smith JO, Maurer-Stroh S, Riley S, Beauchemin CA, Bedford T, Friedrich TC, Handel A, Herfst S, et al. Viral factors in influenza pandemic risk assessment. Elife. 5. PMID 27834632 DOI: 10.7554/Elife.18491 |
0.374 |
|
2016 |
Cortina GA, Kasson PM. Excess Positional Mutual Information Predicts Both Local and Allosteric Mutations Affecting Beta Lactamase Drug Resistance. Bioinformatics (Oxford, England). PMID 27466622 DOI: 10.1093/Bioinformatics/Btw492 |
0.614 |
|
2016 |
Zawada KE, Wrona D, Rawle RJ, Kasson PM. Influenza viral membrane fusion is sensitive to sterol concentration but surprisingly robust to sterol chemical identity. Scientific Reports. 6: 29842. PMID 27431907 DOI: 10.1038/Srep29842 |
0.761 |
|
2016 |
Rawle RJ, Boxer SG, Kasson PM. Disentangling Viral Membrane Fusion from Receptor Binding Using Synthetic DNA-Lipid Conjugates. Biophysical Journal. 111: 123-31. PMID 27410740 DOI: 10.1016/J.Bpj.2016.05.048 |
0.757 |
|
2016 |
Hays JM, Kieber M, Solomon T, Columbus L, Kasson PM. Probing Conformational Equilibria in Flexible Recognition by Molecular Dynamics and EPR Biophysical Journal. 110: 57a. DOI: 10.1016/J.Bpj.2015.11.374 |
0.343 |
|
2016 |
Latallo MJ, Cortina GA, Kasson PM. Novel Allosteric Mutations Increasing Cephalosporin Resistance of CTX-M9 Beta Lactamases Biophysical Journal. 110: 384a. DOI: 10.1016/J.Bpj.2015.11.2073 |
0.628 |
|
2016 |
Rawle R, Kasson P, Boxer S. Disentangling Viral Membrane Fusion from Receptor Binding by using Synthetic DNA-Lipid Conjugates to Tether Influenza Virus to Model Lipid Membranes Biophysical Journal. 110: 251a. DOI: 10.1016/J.Bpj.2015.11.1379 |
0.775 |
|
2016 |
Zawada KE, Wrona D, Kasson PM. Effects of Sterol Substitution on Influenza Viral Membrane Fusion Biophysical Journal. 110: 249a. DOI: 10.1016/J.Bpj.2015.11.1372 |
0.505 |
|
2016 |
Goronzy I, Rawle R, Boxer S, Kasson P. Control of Influenza Virus Binding by Target Membrane Composition Biophysical Journal. 110: 248a-249a. DOI: 10.1016/J.Bpj.2015.11.1367 |
0.763 |
|
2016 |
Kieber MK, Hays J, Solomon T, Kasson P, Columbus L. Neisserial Opa Protein Loop Dynamics and Mechanism of Interaction with Host CEACAM Receptors Biophysical Journal. 110: 221a. DOI: 10.1016/J.Bpj.2015.11.1227 |
0.376 |
|
2015 |
Domanska MK, Dunning RA, Dryden KA, Zawada KE, Yeager M, Kasson PM. Hemagglutinin Spatial Distribution Shifts in Response to Cholesterol in the Influenza Viral Envelope. Biophysical Journal. 109: 1917-24. PMID 26536268 DOI: 10.1016/J.Bpj.2015.09.014 |
0.447 |
|
2015 |
Eckler MJ, Kasson PM. Predicting Functional Interactions in the Influenza Hemagglutinin Transmembrane Domain Via Simulation Biophysical Journal. 108: 83a. DOI: 10.1016/J.Bpj.2014.11.486 |
0.475 |
|
2015 |
Zawada KE, Wrona D, Domańska MK, Kasson PM. Cholesterol and Influenza Viral Fusion Mechanisms: Using Sterol Analogues to Probe Mechanism Biophysical Journal. 108: 407a. DOI: 10.1016/J.Bpj.2014.11.2230 |
0.478 |
|
2015 |
Dunning RA, Domanska MK, Dryden K, Yeager M, Kasson PM. Effect of Cholesterol Depletion on HA Distribution in the Viral Membrane of Influenza Biophysical Journal. 108: 406a-407a. DOI: 10.1016/J.Bpj.2014.11.2229 |
0.471 |
|
2014 |
Russell CA, Kasson PM, Donis RO, Riley S, Dunbar J, Rambaut A, Asher J, Burke S, Davis CT, Garten RJ, Gnanakaran S, Hay SI, Herfst S, Lewis NS, Lloyd-Smith JO, et al. Improving pandemic influenza risk assessment. Elife. 3: e03883. PMID 25321142 DOI: 10.7554/Elife.03883 |
0.345 |
|
2014 |
Larsson P, Kasson PM. Lipid converter, a framework for lipid manipulations in molecular dynamics simulations. The Journal of Membrane Biology. 247: 1137-40. PMID 25081234 DOI: 10.1007/S00232-014-9705-5 |
0.555 |
|
2014 |
Fox DA, Larsson P, Lo RH, Kroncke BM, Kasson PM, Columbus L. Structure of the Neisserial outer membrane protein Opa₆₀: loop flexibility essential to receptor recognition and bacterial engulfment. Journal of the American Chemical Society. 136: 9938-46. PMID 24813921 DOI: 10.1021/Ja503093Y |
0.554 |
|
2014 |
Gregory SM, Larsson P, Nelson EA, Kasson PM, White JM, Tamm LK. Ebolavirus entry requires a compact hydrophobic fist at the tip of the fusion loop. Journal of Virology. 88: 6636-49. PMID 24696482 DOI: 10.1128/Jvi.00396-14 |
0.61 |
|
2014 |
Columbus L, Fox D, Larsson P, Lo R, Kroncke B, Kasson P. Solution Structure Of Opa60 From N. Gonorrhoeae Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2Maf/Pdb |
0.412 |
|
2014 |
Larsson P, Kasson PM. Membrane Fusion Peptide-Membrane Interactions: Comparing Simulations to Experimental Depth Measurements Biophysical Journal. 106: 89a. DOI: 10.1016/J.Bpj.2013.11.563 |
0.616 |
|
2014 |
Kasson P. Membrane Dynamics and Lipid Interactions of Influenza Fusion Proteins Biophysical Journal. 106: 637a. DOI: 10.1016/J.Bpj.2013.11.3522 |
0.518 |
|
2014 |
Pouya I, Klement G, Murail S, Kasson P, Yoluk Ö, Lindahl E. Altering the Open vs. Closed State Balance of the GLIC Ligand-Gated Ion Channel through Mutagenesis Enables Molecular Simulation of the Reversible Gating Process Biophysical Journal. 106: 343a. DOI: 10.1016/J.Bpj.2013.11.1959 |
0.345 |
|
2013 |
Domanska MK, Wrona D, Kasson PM. Multiphasic effects of cholesterol on influenza fusion kinetics reflect multiple mechanistic roles. Biophysical Journal. 105: 1383-7. PMID 24047989 DOI: 10.1016/J.Bpj.2013.08.003 |
0.467 |
|
2013 |
Larsson P, Kasson PM. Lipid tail protrusion in simulations predicts fusogenic activity of influenza fusion peptide mutants and conformational models. Plos Computational Biology. 9: e1002950. PMID 23505359 DOI: 10.1371/Journal.Pcbi.1002950 |
0.623 |
|
2013 |
Pronk S, Páll S, Schulz R, Larsson P, Bjelkmar P, Apostolov R, Shirts MR, Smith JC, Kasson PM, van der Spoel D, Hess B, Lindahl E. GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit. Bioinformatics (Oxford, England). 29: 845-54. PMID 23407358 DOI: 10.1093/Bioinformatics/Btt055 |
0.666 |
|
2013 |
Kasson PM, Hess B, Lindahl E. Probing microscopic material properties inside simulated membranes through spatially resolved three-dimensional local pressure fields and surface tensions. Chemistry and Physics of Lipids. 169: 106-12. PMID 23318532 DOI: 10.1016/J.Chemphyslip.2013.01.001 |
0.373 |
|
2013 |
Kasson PM, Lindahl E. Local Stresses in Fusing Membranes from Molecular Simulation Biophysical Journal. 104: 92a. DOI: 10.1016/J.Bpj.2012.11.549 |
0.428 |
|
2013 |
Domanska MK, Wrona D, Kasson PM. Multiple Effects of Cholesterol on Influenza Membrane Fusion Kinetics Biophysical Journal. 104: 89a. DOI: 10.1016/J.Bpj.2012.11.535 |
0.489 |
|
2013 |
Larsson P, Kasson PM. Lipid Tail Protrusion could Explain Fusogenic Activity in Influenza Hemaggluttinin Biophysical Journal. 104: 87a. DOI: 10.1016/J.Bpj.2012.11.522 |
0.582 |
|
2012 |
Kasson PM. Receptor binding by influenza virus: using computational techniques to extend structural data. Biochemistry. 51: 2359-65. PMID 22409249 DOI: 10.1021/Bi201684V |
0.439 |
|
2012 |
Kasson PM. How Lipid and Water Physical Chemistry May Control Fusion: Behavior of Membrane Interfaces and Fusion Peptides Biophysical Journal. 102: 604a. DOI: 10.1016/J.Bpj.2011.11.3294 |
0.473 |
|
2011 |
Kasson PM, Pande VS. A bundling of viral fusion mechanisms. Proceedings of the National Academy of Sciences of the United States of America. 108: 3827-8. PMID 21368165 DOI: 10.1073/Pnas.1101072108 |
0.624 |
|
2011 |
Kasson PM, Lindahl E, Pande VS. Water ordering at membrane interfaces controls fusion dynamics. Journal of the American Chemical Society. 133: 3812-5. PMID 21351772 DOI: 10.1021/Ja200310D |
0.566 |
|
2011 |
Pronk S, Larsson P, Pouya I, Bowman GR, Haque IS, Beauchamp K, Hess B, Pande VS, Kasson PM, Lindahl E. Copernicus: A new paradigm for parallel adaptive molecular dynamics Proceedings of 2011 Sc - International Conference For High Performance Computing, Networking, Storage and Analysis. DOI: 10.1145/2063384.2063465 |
0.658 |
|
2011 |
Kasson P. Bilayer Structural Changes to Predict Fusogenic Activity of Influenza Hemagglutinin Mutants Biophysical Journal. 100: 326a. DOI: 10.1016/J.Bpj.2010.12.1981 |
0.457 |
|
2010 |
Kasson PM, Lindahl E, Pande VS. Atomic-resolution simulations predict a transition state for vesicle fusion defined by contact of a few lipid tails. Plos Computational Biology. 6: e1000829. PMID 20585620 DOI: 10.1371/Journal.Pcbi.1000829 |
0.608 |
|
2010 |
Kasson PM, Pande VS. "Cross-graining": efficient multi-scale simulation via Markov state models. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 260-8. PMID 19908378 |
0.412 |
|
2010 |
Kasson P, Lindahl E, Pande V. Atomic-Resolution Simulations Yield New Insight into Vesicle Fusion and Fusion Protein Mechanisms Biophysical Journal. 98: 616a. DOI: 10.1016/J.Bpj.2009.12.3363 |
0.61 |
|
2009 |
Kasson PM, Ensign DL, Pande VS. Combining molecular dynamics with bayesian analysis to predict and evaluate ligand-binding mutations in influenza hemagglutinin. Journal of the American Chemical Society. 131: 11338-40. PMID 19637916 DOI: 10.1021/Ja904557W |
0.573 |
|
2009 |
Kasson PM, Pande VS. Combining mutual information with structural analysis to screen for functionally important residues in influenza hemagglutinin. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 492-503. PMID 19209725 |
0.5 |
|
2009 |
Kasson P, Pande V. Analysis Of Influenza Hemagglutinin Ligand-binding From Mutational Data And Molecular Motion Biophysical Journal. 96: 420a. DOI: 10.1016/J.Bpj.2008.12.2150 |
0.553 |
|
2008 |
Kasson PM, Pande VS. Structural basis for influence of viral glycans on ligand binding by influenza hemagglutinin. Biophysical Journal. 95: L48-50. PMID 18641068 DOI: 10.1529/Biophysj.108.141507 |
0.554 |
|
2008 |
Ensign DL, Kasson PM, Pande VS. Addendum to “Heterogeneity Even at the Speed Limit of Folding: Large-Scale Molecular Dynamics Study of a Fast-Folding Variant of the Villin Headpiece” [J. Mol. Biol. 374 (2007) 806–816] Journal of Molecular Biology. 383: 935. DOI: 10.1016/J.Jmb.2008.07.066 |
0.484 |
|
2008 |
Kasson PM, Pande VS. Simulating mechanisms for control of vesicle fusion Aiche Annual Meeting, Conference Proceedings. |
0.465 |
|
2007 |
Kasson PM, Pande VS. Control of membrane fusion mechanism by lipid composition: predictions from ensemble molecular dynamics. Plos Computational Biology. 3: e220. PMID 18020701 DOI: 10.1371/Journal.Pcbi.0030220 |
0.61 |
|
2007 |
Kasson PM, Pande VS. Predicting structure and dynamics of loosely-ordered protein complexes: influenza hemagglutinin fusion peptide. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 40-50. PMID 17992744 |
0.52 |
|
2007 |
Ensign DL, Kasson PM, Pande VS. Heterogeneity even at the speed limit of folding: large-scale molecular dynamics study of a fast-folding variant of the villin headpiece. Journal of Molecular Biology. 374: 806-16. PMID 17950314 DOI: 10.1016/J.Jmb.2007.09.069 |
0.512 |
|
2007 |
Kasson PM, Zomorodian A, Park S, Singhal N, Guibas LJ, Pande VS. Persistent voids: a new structural metric for membrane fusion. Bioinformatics (Oxford, England). 23: 1753-9. PMID 17488753 DOI: 10.1093/Bioinformatics/Btm250 |
0.603 |
|
2006 |
Kasson PM, Kelley NW, Singhal N, Vrljic M, Brunger AT, Pande VS. Ensemble molecular dynamics yields submillisecond kinetics and intermediates of membrane fusion. Proceedings of the National Academy of Sciences of the United States of America. 103: 11916-21. PMID 16880392 DOI: 10.1073/Pnas.0601597103 |
0.692 |
|
2005 |
Kasson PM, Davis MM, Brunger AT. Deformable modeling for improved calculation of molecular velocities from single-particle tracking. Proceedings / Ieee Computational Systems Bioinformatics Conference, Csb. Ieee Computational Systems Bioinformatics Conference. 208-11. PMID 16447978 DOI: 10.1109/CSB.2005.28 |
0.44 |
|
2005 |
Kasson PM, Huppa JB, Davis MM, Brunger AT. A hybrid machine-learning approach for segmentation of protein localization data. Bioinformatics (Oxford, England). 21: 3778-86. PMID 16091410 DOI: 10.1093/Bioinformatics/Bti615 |
0.519 |
|
2005 |
Kasson PM, Huppa JB, Krogsgaard M, Davis MM, Brunger AT. Quantitative imaging of lymphocyte membrane protein reorganization and signaling. Biophysical Journal. 88: 579-89. PMID 15501943 DOI: 10.1529/Biophysj.104.048827 |
0.539 |
|
2004 |
Kasson PM, Pande VS. Molecular dynamics simulation of lipid reorientation at bilayer edges. Biophysical Journal. 86: 3744-9. PMID 15189870 DOI: 10.1529/Biophysj.103.029652 |
0.613 |
|
2004 |
Kasson PM, Huppa JB, Davis MM, Brunger AT. Quantitative analysis of lymphocyte membrane protein redistribution from fluorescence microscopy Proceedings - International Conference On Image Processing, Icip. 2: 2933-2936. |
0.52 |
|
2004 |
Kasson PM, Huppa JB, Davis MM, Brunger AT. Quantitative analysis of membrane protein localization and signaling Proceedings - 2004 Ieee Computational Systems Bioinformatics Conference, Csb 2004. 540-541. |
0.51 |
|
2000 |
Kasson PM, Rabinowitz JD, Schmitt L, Davis MM, McConnell HM. Kinetics of peptide binding to the class II MHC protein I-Ek. Biochemistry. 39: 1048-58. PMID 10653650 DOI: 10.1021/Bi9921337 |
0.467 |
|
1998 |
Rabinowitz JD, Vrljic M, Kasson PM, Liang MN, Busch R, Boniface JJ, Davis MM, McConnell HM. Formation of a highly peptide-receptive state of class II MHC. Immunity. 9: 699-709. PMID 9846491 DOI: 10.1016/S1074-7613(00)80667-6 |
0.453 |
|
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