J. B. Wagenaar, Ph.D. - Publications

Affiliations: 
2011 University of Pittsburgh, Pittsburgh, PA, United States 
Area:
Biomedical Engineering

19/61 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Ono T, Wagenaar J, Giorgi FS, Fabera P, Hanaya R, Jefferys J, Moyer JT, Harte-Hargrove LC, Galanopoulou AS. A companion to the preclinical common data elements and case report forms for rodent EEG studies. A report of the TASK3 EEG Working Group of the ILAE/AES Joint Translational Task Force. Epilepsia Open. 3: 90-103. PMID 30450486 DOI: 10.1002/epi4.12260  0.308
2017 Davis KA, Devries SP, Krieger A, Mihaylova T, Minecan D, Litt B, Wagenaar JB, Stacey WC. The effect of increased intracranial EEG sampling rates in clinical practice. Clinical Neurophysiology : Official Journal of the International Federation of Clinical Neurophysiology. 129: 360-367. PMID 29288992 DOI: 10.1016/J.Clinph.2017.10.039  0.354
2017 Moyer JT, Gnatkovsky V, Ono T, Otáhal J, Wagenaar J, Stacey WC, Noebels J, Ikeda A, Staley K, de Curtis M, Litt B, Galanopoulou AS. Standards for data acquisition and software-based analysis of in vivo electroencephalography recordings from animals. A TASK1-WG5 report of the AES/ILAE Translational Task Force of the ILAE. Epilepsia. 58: 53-67. PMID 29105070 DOI: 10.1111/Epi.13909  0.427
2017 Ung H, Cazares C, Nanivadekar A, Kini L, Wagenaar J, Becker D, Krieger A, Lucas T, Litt B, Davis KA. Interictal epileptiform activity outside the seizure onset zone impacts cognition. Brain : a Journal of Neurology. PMID 28666338 DOI: 10.1093/Brain/Awx143  0.379
2017 Baldassano SN, Brinkmann BH, Ung H, Blevins T, Conrad EC, Leyde K, Cook MJ, Khambhati AN, Wagenaar JB, Worrell GA, Litt B. Crowdsourcing seizure detection: algorithm development and validation on human implanted device recordings. Brain : a Journal of Neurology. PMID 28459961 DOI: 10.1093/Brain/Awx098  0.396
2016 Ung H, Davis KA, Wulsin D, Wagenaar J, Fox E, McDonnell JJ, Patterson N, Vite CH, Worrell G, Litt B. Temporal behavior of seizures and interictal bursts in prolonged intracranial recordings from epileptic canines. Epilepsia. PMID 27807850 DOI: 10.1111/Epi.13591  0.391
2016 Brinkmann BH, Patterson EE, Vite C, Vasoli VM, Crepeau D, Stead M, Howbert JJ, Cherkassky V, Wagenaar JB, Litt B, Worrell GA. Correction: Forecasting Seizures Using Bivariate Intracranial EEG Measures and SVM in Naturally Occurring Canine Epilepsy. Plos One. 11: e0156476. PMID 27227650 DOI: 10.1371/Journal.Pone.0156476  0.361
2016 Brinkmann BH, Wagenaar J, Abbot D, Adkins P, Bosshard SC, Chen M, Tieng QM, He J, Muñoz-Almaraz FJ, Botella-Rocamora P, Pardo J, Zamora-Martinez F, Hills M, Wu W, Korshunova I, et al. Crowdsourcing reproducible seizure forecasting in human and canine epilepsy. Brain : a Journal of Neurology. PMID 27034258 DOI: 10.1093/Brain/Aww045  0.42
2016 Vanleer AC, Blanco JA, Wagenaar JB, Viventi J, Contreras D, Litt B. Millimeter-scale epileptiform spike propagation patterns and their relationship to seizures. Journal of Neural Engineering. 13: 026015. PMID 26859260 DOI: 10.1088/1741-2560/13/2/026015  0.376
2015 Davis KA, Ung H, Wulsin D, Wagenaar J, Fox E, Patterson N, Vite C, Worrell G, Litt B. Mining continuous intracranial EEG in focal canine epilepsy: Relating interictal bursts to seizure onsets. Epilepsia. PMID 26608448 DOI: 10.1111/Epi.13249  0.397
2015 Brinkmann BH, Patterson EE, Vite C, Vasoli VM, Crepeau D, Stead M, Howbert JJ, Cherkassky V, Wagenaar JB, Litt B, Worrell GA. Forecasting Seizures Using Intracranial EEG Measures and SVM in Naturally Occurring Canine Epilepsy. Plos One. 10: e0133900. PMID 26241907 DOI: 10.1371/Journal.Pone.0133900  0.421
2015 Kini LG, Davis KA, Wagenaar JB. Data integration: Combined imaging and electrophysiology data in the cloud. Neuroimage. PMID 26044858 DOI: 10.1016/J.Neuroimage.2015.05.075  0.317
2015 Wagenaar JB, Worrell GA, Ives Z, Matthias D, Litt B, Schulze-Bonhage A. Collaborating and sharing data in epilepsy research. Journal of Clinical Neurophysiology : Official Publication of the American Electroencephalographic Society. 32: 235-9. PMID 26035676 DOI: 10.1097/Wnp.0000000000000159  0.34
2015 Janca R, Jezdik P, Cmejla R, Tomasek M, Worrell GA, Stead M, Wagenaar J, Jefferys JG, Krsek P, Komarek V, Jiruska P, Marusic P. Detection of interictal epileptiform discharges using signal envelope distribution modelling: application to epileptic and non-epileptic intracranial recordings. Brain Topography. 28: 172-83. PMID 24970691 DOI: 10.1007/S10548-014-0379-1  0.374
2013 Bruns TM, Wagenaar JB, Bauman MJ, Gaunt RA, Weber DJ. Real-time control of hind limb functional electrical stimulation using feedback from dorsal root ganglia recordings. Journal of Neural Engineering. 10: 026020. PMID 23503062 DOI: 10.1088/1741-2560/10/2/026020  0.443
2011 Bauman MJ, Bruns TM, Wagenaar JB, Gaunt RA, Weber DJ. Online feedback control of functional electrical stimulation using dorsal root ganglia recordings. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2011: 7246-9. PMID 22256011 DOI: 10.1109/IEMBS.2011.6091831  0.39
2011 Wagenaar JB, Ventura V, Weber DJ. State-space decoding of primary afferent neuron firing rates. Journal of Neural Engineering. 8: 016002. PMID 21245525 DOI: 10.1088/1741-2560/8/1/016002  0.431
2009 Wagenaar JB, Ventura V, Weber DJ. Improved decoding of limb-state feedback from natural sensors. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2009: 4206-9. PMID 19964343 DOI: 10.1109/IEMBS.2009.5333614  0.404
2004 Stein RB, Weber DJ, Aoyagi Y, Prochazka A, Wagenaar JB, Shoham S, Normann RA. Coding of position by simultaneously recorded sensory neurones in the cat dorsal root ganglion. The Journal of Physiology. 560: 883-96. PMID 15331686 DOI: 10.1113/Jphysiol.2004.068668  0.378
Low-probability matches (unlikely to be authored by this person)
2017 Christini A, Waanders AJ, Wagenaar JB, Felmeister AS, Santi M, Wadhwani NR, Mason JL, Koptyra MP, Lilly JV, Pennington JW, Lulla RR, Resnick AC. Abstract 2593: Accelerating pediatric brain tumor research through team science solutions Cancer Research. 77: 2593-2593. DOI: 10.1158/1538-7445.Am2017-2593  0.29
2020 Baldassano S, Gelfand M, Bhalla PK, Hill C, Christini A, Wagenaar J, Litt B, Roberson SW, Balu R, Scheid B, Bernabei J, Pathmanathan J, Oommen B, Leri D, Echauz J. IRIS: A Modular Platform for Continuous Monitoring and Caretaker Notification in the Intensive Care Unit. Ieee Journal of Biomedical and Health Informatics. PMID 31940568 DOI: 10.1109/Jbhi.2020.2965858  0.285
2014 Azarion AA, Wu J, Pearce A, Krish VT, Wagenaar J, Chen W, Zheng Y, Wang H, Lucas TH, Litt B, Gee JC, Davis KA. An open-source automated platform for three-dimensional visualization of subdural electrodes using CT-MRI coregistration. Epilepsia. 55: 2028-37. PMID 25377267 DOI: 10.1111/Epi.12827  0.268
2019 Ramirez-Zamora A, Giordano J, Boyden ES, Gradinaru V, Gunduz A, Starr PA, Sheth SA, McIntyre CC, Fox MD, Vitek J, Vedam-Mai V, Akbar U, Almeida L, Bronte-Stewart HM, Mayberg HS, ... ... Wagenaar J, et al. Proceedings of the Sixth Deep Brain Stimulation Think Tank Modulation of Brain Networks and Application of Advanced Neuroimaging, Neurophysiology, and Optogenetics. Frontiers in Neuroscience. 13: 936. PMID 31572109 DOI: 10.3389/Fnins.2019.00936  0.259
2021 Osanlouy M, Bandrowski A, de Bono B, Brooks D, Cassarà AM, Christie R, Ebrahimi N, Gillespie T, Grethe JS, Guercio LA, Heal M, Lin M, Kuster N, Martone ME, Neufeld E, ... ... Wagenaar JB, et al. The SPARC DRC: Building a Resource for the Autonomic Nervous System Community. Frontiers in Physiology. 12: 693735. PMID 34248680 DOI: 10.3389/fphys.2021.693735  0.146
2016 Wagenaar J, Adler A. Electrical impedance tomography in 3D using two electrode planes: characterization and evaluation. Physiological Measurement. 37: 922-37. PMID 27203154 DOI: 10.1088/0967-3334/37/6/922  0.135
2024 Wang Z, Zhan Q, Yang S, Mu S, Chen J, Garai S, Orzechowski P, Wagenaar J, Shen L. QOT: Efficient Computation of Sample Level Distance Matrix from Single-Cell Omics Data through Quantized Optimal Transport. Biorxiv : the Preprint Server For Biology. PMID 38370767 DOI: 10.1101/2024.02.06.578032  0.122
2015 Kini LG, Davis KA, Wagenaar JB. Data integration: Combined imaging and electrophysiology data in the cloud Neuroimage. DOI: 10.1016/j.neuroimage.2015.05.075  0.116
2021 Koenen M, Balvert M, Brekelmans R, Fleuren H, Stienen V, Wagenaar J. Forecasting the spread of SARS-CoV-2 is inherently ambiguous given the current state of virus research. Plos One. 16: e0245519. PMID 33657128 DOI: 10.1371/journal.pone.0245519  0.103
2002 Heida T, Wagenaar JB, Rutten WL, Marani E. Investigating membrane breakdown of neuronal cells exposed to nonuniform electric fields by finite-element modeling and experiments. Ieee Transactions On Bio-Medical Engineering. 49: 1195-203. PMID 12374345 DOI: 10.1109/TBME.2002.803503  0.103
2013 Goeijenbier M, Wagenaar J, Goris M, Martina B, Henttonen H, Vaheri A, Reusken C, Hartskeerl R, Osterhaus A, Van Gorp E. Rodent-borne hemorrhagic fevers: under-recognized, widely spread and preventable - epidemiology, diagnostics and treatment. Critical Reviews in Microbiology. 39: 26-42. PMID 22670688 DOI: 10.3109/1040841X.2012.686481  0.086
2018 Nijenhuis SM, Prange-Lasonder GB, Fleuren JF, Wagenaar J, Buurke JH, Rietman JS. Strong relations of elbow excursion and grip strength with post-stroke arm function and activities: Should we aim for this in technology-supported training? Journal of Rehabilitation and Assistive Technologies Engineering. 5: 2055668318779301. PMID 31191944 DOI: 10.1177/2055668318779301  0.084
1988 Schreinemachers LM, van der Meijden AP, Wagenaar J, Steerenberg PA, Feitz WF, Groothuis DG, Tiesjema RH, de Jong WH, Debruyne FM, Ruitenberg EJ. Intravesical and intradermal Bacillus Calmette-Guérin application. A phase I study to the toxicity of a Dutch Bacillus Calmette-Guérin preparation in patients with superficial bladder cancer. European Urology. 14: 15-21. PMID 2963745  0.068
1985 Debruyne FM, van der Meijden AP, Schreinemachers LM, Wagenaar J, Feitz WF, Hendriks B, de Jong WH, Steeren-Berg PA. Intravesical and intradermal BCG-RIVM application: a toxicity study. Progress in Clinical and Biological Research. 151-9. PMID 4034587  0.065
2006 Baas P, van 't Hullenaar N, Wagenaar J, Kaajan JP, Koolen M, Schrijver M, Schlösser N, Burgers JA. Occupational asbestos exposure: how to deal with suspected mesothelioma cases--the Dutch approach. Annals of Oncology : Official Journal of the European Society For Medical Oncology. 17: 848-52. PMID 16500906 DOI: 10.1093/annonc/mdl021  0.064
2023 Rozwandowicz M, Kant A, Wagenaar J, Mevius D, Hordijk J, Brouwer M. Understanding the genetic basis of the incompatibility of IncK1 and IncK2 plasmids. Open Research Europe. 3: 53. PMID 38106640 DOI: 10.12688/openreseurope.15121.2  0.063
1994 Pinelli E, Killick-Kendrick R, Wagenaar J, Bernadina W, del Real G, Ruitenberg J. Cellular and humoral immune responses in dogs experimentally and naturally infected with Leishmania infantum. Infection and Immunity. 62: 229-35. PMID 8262632 DOI: 10.1128/iai.62.1.229-235.1994  0.061
2007 Wagenaar J, van Duijkeren E, Troelstra A, van de Giessen A, Kluytmans J, Mevius D, Tiemersma E, van der Wolf P. [Questions and answers about MRSA in farm animals]. Tijdschrift Voor Diergeneeskunde. 132: 558-60. PMID 17715809  0.057
2022 Tulp E, Wagenaar J. [Not Available]. Nursing. 28: 39-44. PMID 35378724 DOI: 10.1007/s41193-022-0046-y  0.057
1981 Veninga TS, Wagenaar J, Lemstra W. Distinct enzymatic responses in mice exposed to a range of low doses of ozone. Environmental Health Perspectives. 39: 153-7. PMID 7238452 DOI: 10.1289/ehp.8139153  0.057
2000 Wagenaar J, Zuerner RL, Alt D, Bolin CA. Comparison of polymerase chain reaction assays with bacteriologic culture, immunofluorescence, and nucleic acid hybridization for detection of Leptospira borgpetersenii serovar hardjo in urine of cattle American Journal of Veterinary Research. 61: 316-320. PMID 10714525  0.055
2004 Mairuhu AT, Wagenaar J, Brandjes DP, van Gorp EC. Dengue: an arthropod-borne disease of global importance. European Journal of Clinical Microbiology & Infectious Diseases : Official Publication of the European Society of Clinical Microbiology. 23: 425-33. PMID 15148655 DOI: 10.1007/s10096-004-1145-1  0.054
2005 Teunis P, Van den Brandhof W, Nauta M, Wagenaar J, Van den Kerkhof H, Van Pelt W. A reconsideration of the Campylobacter dose-response relation. Epidemiology and Infection. 133: 583-92. PMID 16050502 DOI: 10.1017/s0950268805003912  0.052
1976 Wagenaar J. Results of the surgical treatment of subpelvic stenosis of the ureter by Anderson-Hynes pyeloplasty as modified by Couvelaire. Archivum Chirurgicum Neerlandicum. 28: 21-4. PMID 938058  0.044
2022 Murray EC, Delles C, Orzechowski P, Renc P, Sitek A, Wagenaar J, Guzik TJ. Vascular phenotypes in early hypertension. Journal of Human Hypertension. 1-9. PMID 36528682 DOI: 10.1038/s41371-022-00794-7  0.043
1973 Wagenaar J. Chronic recurrent parotitis in children. Archivum Chirurgicum Neerlandicum. 25: 13-8. PMID 4694063  0.038
2006 Duim B, Wagenaar J. Amplified fragment-length polymorphism and protein profiling for identification of Campylobacter lari subgroups. Methods in Molecular Biology (Clifton, N.J.). 345: 119-30. PMID 16957352 DOI: 10.1385/1-59745-143-6:119  0.038
2013 Spiering R, van der Zee R, Wagenaar J, van Eden W, Broere F. Mycobacterial and mouse HSP70 have immuno-modulatory effects on dendritic cells. Cell Stress & Chaperones. 18: 439-46. PMID 23269491 DOI: 10.1007/s12192-012-0397-4  0.032
1976 Wagenaar J. Vasectomy in prostatic surgery. European Urology. 1: 275-7. PMID 1233195  0.031
2007 Wieten L, Broere F, van der Zee R, Koerkamp EK, Wagenaar J, van Eden W. Cell stress induced HSP are targets of regulatory T cells: a role for HSP inducing compounds as anti-inflammatory immuno-modulators? Febs Letters. 581: 3716-22. PMID 17507013 DOI: 10.1016/j.febslet.2007.04.082  0.028
1999 Duim B, Wassenaar TM, Rigter A, Wagenaar J. High-resolution genotyping of Campylobacter strains isolated from poultry and humans with amplified fragment length polymorphism fingerprinting. Applied and Environmental Microbiology. 65: 2369-75. PMID 10347015 DOI: 10.1128/AEM.65.6.2369-2375.1999  0.027
1994 van Adrichem NP, van Leewaarden B, Vos P, Wagenaar J. [Gastrostomy instead of gastric intubation for stomach decompression after large urologic operations]. Der Urologe. Ausg. A. 32: 480-1. PMID 7506851  0.026
1972 Wagenaar J. [2 patients with obstructive jaundice]. Nederlands Tijdschrift Voor Geneeskunde. 116: 301-4. PMID 5038528  0.024
1995 Burgers JA, Wagenaar J. Screening for malignancies in patients with recurrent venous thrombosis. British Journal of Urology. 74: 669-70. PMID 7827822 DOI: 10.1111/j.1464-410x.1994.tb09204.x  0.022
2012 Bosman AB, Wagenaar JA, Wagenaar J, Stegeman A, Vernooij H, Mevius D. Quantifying antimicrobial resistance at veal calf farms. Plos One. 7: e44831. PMID 22970313 DOI: 10.1371/journal.pone.0044831  0.022
1970 Wagenaar J. [A case of costoclavicular compression syndrome in Ehrenfried's disease]. Nederlands Tijdschrift Voor Geneeskunde. 114: 1453-6. PMID 5311078  0.02
1988 Osterhaus A, Wagenaar J, Weijer K, UytdeHaag F. Idiotype networks in the immune response to feline leukemia virus. Monographs in Allergy. 22: 158-65. PMID 2830503  0.019
1975 van Lis JM, Wagenaar J, Soer JR. Sperm-agglutinating activity in serum of vasectomized men. Andrologia. 6: 129-34. PMID 4422012 DOI: 10.1111/j.1439-0272.1974.tb01610.x  0.014
2008 van Bergen M, Wagenaar J. [Phage therapy: harmless viruses help destroy bacterial infections]. Tijdschrift Voor Diergeneeskunde. 133: 618-21. PMID 18767304  0.013
2013 van Eden W, van Herwijnen M, Wagenaar J, van Kooten P, Broere F, van der Zee R. Stress proteins are used by the immune system for cognate interactions with anti-inflammatory regulatory T cells. Febs Letters. 587: 1951-8. PMID 23707418 DOI: 10.1016/j.febslet.2013.05.024  0.01
2012 Spiering R, van der Zee R, Wagenaar J, Kapetis D, Zolezzi F, van Eden W, Broere F. Tolerogenic dendritic cells that inhibit autoimmune arthritis can be induced by a combination of carvacrol and thermal stress. Plos One. 7: e46336. PMID 23050016 DOI: 10.1371/journal.pone.0046336  0.01
1974 Veninga TS, Kerkstra J, Wagenaar J. Origin of radiation released serotonin in rabbits and mice. Acta Radiologica: Therapy, Physics, Biology. 12: 454-64. PMID 4204846 DOI: 10.3109/02841867309130412  0.01
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