Year |
Citation |
Score |
2023 |
Sposato AL, Llewellyn DR, Weber JM, Hollins HL, Schrock MN, Farrell JA, Gagnon JA. Germ cells do not progress through spermatogenesis in the infertile zebrafish testis. Biorxiv : the Preprint Server For Biology. PMID 37732254 DOI: 10.1101/2023.09.05.556432 |
0.727 |
|
2019 |
Ma 马漫修 M, Ramirez AD, Wang 王彤 T, Roberts RL, Harmon KE, Schoppik D, Sharma A, Kuang C, Goei SL, Gagnon JA, Zimmerman S, Tsai SQ, Reyon D, Joung JK, Aksay ERF, et al. Zebrafish Deficiency Impairs Retinal Patterning and Oculomotor Function. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 31685652 DOI: 10.1523/Jneurosci.1783-19.2019 |
0.738 |
|
2019 |
Wee CL, Nikitchenko M, Wang WC, Luks-Morgan SJ, Song E, Gagnon JA, Randlett O, Bianco IH, Lacoste AMB, Glushenkova E, Barrios JP, Schier AF, Kunes S, Engert F, Douglass AD. Zebrafish oxytocin neurons drive nocifensive behavior via brainstem premotor targets. Nature Neuroscience. PMID 31358991 DOI: 10.1038/S41593-019-0452-X |
0.743 |
|
2018 |
Montague TG, Gagnon JA, Schier AF. Conserved regulation of Nodal-mediated left-right patterning in zebrafish and mouse. Development (Cambridge, England). PMID 30446628 DOI: 10.1242/Dev.171090 |
0.748 |
|
2018 |
Raj B, Gagnon JA, Schier AF. Large-scale reconstruction of cell lineages using single-cell readout of transcriptomes and CRISPR-Cas9 barcodes by scGESTALT. Nature Protocols. PMID 30353175 DOI: 10.1038/S41596-018-0058-X |
0.621 |
|
2018 |
Raj B, Wagner DE, McKenna A, Pandey S, Klein AM, Shendure J, Gagnon JA, Schier AF. Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain. Nature Biotechnology. PMID 29608178 DOI: 10.1038/Nbt.4103 |
0.596 |
|
2017 |
Rogers KW, Lord ND, Gagnon JA, Pauli A, Zimmerman S, Aksel DC, Reyon D, Tsai SQ, Joung JK, Schier AF. Nodal patterning without Lefty inhibitory feedback is functional but fragile. Elife. 6. PMID 29215332 DOI: 10.7554/Elife.28785 |
0.739 |
|
2017 |
Gagnon JA, Obbad K, Schier AF. Zebrafish nanog is primarily required in extraembryonic tissue. Development (Cambridge, England). PMID 29180571 DOI: 10.1242/Dev.147793 |
0.6 |
|
2017 |
Freifeld L, Odstrcil I, Förster D, Ramirez A, Gagnon JA, Randlett O, Costa EK, Asano S, Celiker OT, Gao R, Martin-Alarcon DA, Reginato P, Dick C, Chen L, Schoppik D, et al. Expansion microscopy of zebrafish for neuroscience and developmental biology studies. Proceedings of the National Academy of Sciences of the United States of America. PMID 29162696 DOI: 10.1073/Pnas.1706281114 |
0.739 |
|
2017 |
Norris ML, Pauli A, Gagnon JA, Lord ND, Rogers KW, Mosimann C, Zon LI, Schier AF. Toddler signaling regulates mesodermal cell migration downstream of Nodal signaling. Elife. 6. PMID 29117894 DOI: 10.7554/Elife.22626 |
0.738 |
|
2017 |
Ciocanel MV, Kreiling JA, Gagnon JA, Mowry KL, Sandstede B. Analysis of Active Transport by Fluorescence Recovery after Photobleaching. Biophysical Journal. 112: 1714-1725. PMID 28445762 DOI: 10.1016/J.Bpj.2017.02.042 |
0.706 |
|
2016 |
McKenna A, Findlay GM, Gagnon JA, Horwitz MS, Schier AF, Shendure J. Whole organism lineage tracing by combinatorial and cumulative genome editing. Science (New York, N.Y.). PMID 27229144 DOI: 10.1126/Science.Aaf7907 |
0.553 |
|
2016 |
Labun K, Montague TG, Gagnon JA, Thyme SB, Valen E. CHOPCHOP v2: a web tool for the next generation of CRISPR genome engineering. Nucleic Acids Research. PMID 27185894 DOI: 10.1093/Nar/Gkw398 |
0.736 |
|
2015 |
Powrie EA, Ciocanel V, Kreiling JA, Gagnon JA, Sandstede B, Mowry KL. Using in vivo imaging to measure RNA mobility in Xenopus laevis oocytes. Methods (San Diego, Calif.). PMID 26546269 DOI: 10.1016/J.Ymeth.2015.11.003 |
0.704 |
|
2015 |
Merkle FT, Neuhausser WM, Santos D, Valen E, Gagnon JA, Maas K, Sandoe J, Schier AF, Eggan K. Efficient CRISPR-Cas9-Mediated Generation of Knockin Human Pluripotent Stem Cells Lacking Undesired Mutations at the Targeted Locus. Cell Reports. 11: 875-83. PMID 25937281 DOI: 10.1016/J.Celrep.2015.04.007 |
0.542 |
|
2015 |
Liu J, Merkle FT, Gandhi AV, Gagnon JA, Woods IG, Chiu CN, Shimogori T, Schier AF, Prober DA. Evolutionarily conserved regulation of hypocretin neuron specification by Lhx9. Development (Cambridge, England). 142: 1113-24. PMID 25725064 DOI: 10.1242/Dev.117424 |
0.738 |
|
2014 |
Gagnon JA, Valen E, Thyme SB, Huang P, Ahkmetova L, Pauli A, Montague TG, Zimmerman S, Richter C, Schier AF. Efficient mutagenesis by Cas9 protein-mediated oligonucleotide insertion and large-scale assessment of single-guide RNAs. Plos One. 9: e98186. PMID 24873830 DOI: 10.1371/Journal.Pone.0098186 |
0.743 |
|
2014 |
Montague TG, Cruz JM, Gagnon JA, Church GM, Valen E. CHOPCHOP: a CRISPR/Cas9 and TALEN web tool for genome editing. Nucleic Acids Research. 42: W401-7. PMID 24861617 DOI: 10.1093/Nar/Gku410 |
0.752 |
|
2014 |
Pauli A, Norris ML, Valen E, Chew GL, Gagnon JA, Zimmerman S, Mitchell A, Ma J, Dubrulle J, Reyon D, Tsai SQ, Joung JK, Saghatelian A, Schier AF. Toddler: an embryonic signal that promotes cell movement via Apelin receptors. Science (New York, N.Y.). 343: 1248636. PMID 24407481 DOI: 10.1126/Science.1248636 |
0.755 |
|
2013 |
Gagnon JA, Kreiling JA, Powrie EA, Wood TR, Mowry KL. Directional transport is mediated by a Dynein-dependent step in an RNA localization pathway. Plos Biology. 11: e1001551. PMID 23637574 DOI: 10.1371/Journal.Pbio.1001551 |
0.715 |
|
2011 |
Gagnon JA, Mowry KL. Molecular motors: directing traffic during RNA localization. Critical Reviews in Biochemistry and Molecular Biology. 46: 229-39. PMID 21476929 DOI: 10.3109/10409238.2011.572861 |
0.714 |
|
2011 |
Gagnon JA, Mowry KL. Visualization of mRNA localization in Xenopus oocytes. Methods in Molecular Biology (Clifton, N.J.). 714: 71-82. PMID 21431735 DOI: 10.1007/978-1-61779-005-8_5 |
0.676 |
|
2010 |
Gagnon JA, Mowry KL. Visualizing RNA localization in Xenopus oocytes. Journal of Visualized Experiments : Jove. PMID 20075839 DOI: 10.3791/1704 |
0.714 |
|
2009 |
Gagnon JA, Mowry KL. VISIONS: the art of science. Molecular Reproduction and Development. 76: 1115. PMID 19834979 DOI: 10.1002/mrd.21104 |
0.574 |
|
2008 |
Messitt TJ, Gagnon JA, Kreiling JA, Pratt CA, Yoon YJ, Mowry KL. Multiple kinesin motors coordinate cytoplasmic RNA transport on a subpopulation of microtubules in Xenopus oocytes. Developmental Cell. 15: 426-36. PMID 18771961 DOI: 10.1016/J.Devcel.2008.06.014 |
0.742 |
|
2008 |
Lewis RA, Gagnon JA, Mowry KL. PTB/hnRNP I is required for RNP remodeling during RNA localization in Xenopus oocytes. Molecular and Cellular Biology. 28: 678-86. PMID 18039852 DOI: 10.1128/Mcb.00999-07 |
0.761 |
|
2008 |
Mowry KL, Gagnon JA, Kreiling JA, Messitt TJ, Pratt CA, Yoon YJ. RNA transport in the oocyte cytoplasm: How to get there from here Developmental Biology. 319: 464. DOI: 10.1016/J.Ydbio.2008.05.011 |
0.748 |
|
Low-probability matches (unlikely to be authored by this person) |
2019 |
McKenna A, Gagnon JA. Recording development with single cell dynamic lineage tracing. Development (Cambridge, England). 146. PMID 31249005 DOI: 10.1242/Dev.169730 |
0.295 |
|
2019 |
Labun K, Guo X, Chavez A, Church G, Gagnon JA, Valen E. Accurate analysis of genuine CRISPR editing events with ampliCan. Genome Research. PMID 30850374 DOI: 10.1101/Gr.244293.118 |
0.294 |
|
2020 |
Carey CM, Gagnon JA. CRISPR Rube Goldberg machines for visualizing cell lineage. Nature Neuroscience. PMID 32770155 DOI: 10.1038/S41593-020-0694-7 |
0.294 |
|
2020 |
Balla KM, Rice MC, Gagnon JA, Elde NC. Linking Virus Discovery to Immune Responses Visualized during Zebrafish Infections. Current Biology : Cb. PMID 32413307 DOI: 10.1016/J.Cub.2020.04.031 |
0.292 |
|
2016 |
Norris ML, Pauli A, Gagnon JA, Lord ND, Rogers KW, Mosimann C, Zon LI, Schier AF. Author response: Toddler signaling regulates mesodermal cell migration downstream of Nodal signaling Elife. DOI: 10.7554/Elife.22626.018 |
0.274 |
|
2006 |
Lengner CJ, Steinman HA, Gagnon J, Smith TW, Henderson JE, Kream BE, Stein GS, Lian JB, Jones SN. Osteoblast differentiation and skeletal development are regulated by Mdm2-p53 signaling. The Journal of Cell Biology. 172: 909-21. PMID 16533949 DOI: 10.1083/Jcb.200508130 |
0.27 |
|
2007 |
Lohmueller J, Neretti N, Hickey B, Kaka A, Gao A, Lemon J, Lattanzi V, Goldstein P, Tam LK, Schmidt M, Brodsky AS, Haberstroh K, Morgan J, Palmore T, Wessel G, ... ... Gagnon J, et al. Progress toward construction and modelling of a tri-stable toggle switch in E. coli Iet Synthetic Biology. 1: 25-28. DOI: 10.1049/Iet-Stb:20070001 |
0.22 |
|
2017 |
Rogers KW, Lord ND, Gagnon JA, Pauli A, Zimmerman S, Aksel DC, Reyon D, Tsai SQ, Joung JK, Schier AF. Author response: Nodal patterning without Lefty inhibitory feedback is functional but fragile Elife. DOI: 10.7554/Elife.28785.028 |
0.204 |
|
2014 |
Gagnon JA, Valen E, Thyme SB, Huang P, Ahkmetova L. Correction: Efficient mutagenesis by Cas9 protein-mediated oligonucleotide insertion and large-scale assessment of single-guide RNAs (PLoS ONE (2014) 9, 5 (e98186) DOI: 10.1371/journal.pone.0098186) Plos One. 9. DOI: 10.1371/journal.pone.0106396 |
0.198 |
|
2007 |
Lohmueller J, Hickey B, Kaka A, Gao A, Lemon J, Lattanzi V, Goldstein P, Tam L, Schmidt M, Cumbers J, Gagnon J, Urabe H, Jaklenec A, Wessel G. Progress toward the construction of a tri-stable genetic toggle switch in E. coli Bmc Systems Biology. 1. DOI: 10.1186/1752-0509-1-S1-P39 |
0.191 |
|
2021 |
Odstrcil I, Petkova MD, Haesemeyer M, Boulanger-Weill J, Nikitchenko M, Gagnon JA, Oteiza P, Schalek R, Peleg A, Portugues R, Lichtman JW, Engert F. Functional and ultrastructural analysis of reafferent mechanosensation in larval zebrafish. Current Biology : Cb. PMID 34822765 DOI: 10.1016/j.cub.2021.11.007 |
0.179 |
|
2023 |
Rice MC, Little JH, Forrister DL, Machado J, Clark NL, Gagnon JA. Gadusol is a maternally provided sunscreen that protects fish embryos from DNA damage. Current Biology : Cb. PMID 37369210 DOI: 10.1016/j.cub.2023.06.012 |
0.157 |
|
2021 |
Takasugi PR, Wang S, Truong KT, Drage EP, Kanishka SN, Higbee MA, Bamidele N, Ojelabi O, Sontheimer EJ, Gagnon JA. Orthogonal CRISPR-Cas tools for genome editing, inhibition, and CRISPR recording in zebrafish embryos. Genetics. PMID 34735006 DOI: 10.1093/genetics/iyab196 |
0.155 |
|
2023 |
Rice MC, Little JH, Forrister DL, Machado J, Clark NL, Gagnon JA. Gadusol is a maternally provided sunscreen that protects fish embryos from DNA damage. Biorxiv : the Preprint Server For Biology. PMID 36778296 DOI: 10.1101/2023.01.30.526370 |
0.135 |
|
2024 |
Carey CM, Hollins HL, Schmid AV, Gagnon JA. Distinct features of the regenerating heart uncovered through comparative single-cell profiling. Biology Open. 13. PMID 38526188 DOI: 10.1242/bio.060156 |
0.12 |
|
2022 |
Su Y, Lin HC, Teh LS, Chevance F, James I, Mayfield C, Golic KG, Gagnon JA, Rog O, Dale C. Rational engineering of a synthetic insect-bacterial mutualism. Current Biology : Cb. PMID 35963240 DOI: 10.1016/j.cub.2022.07.036 |
0.119 |
|
2023 |
Carey CM, Hollins HL, Schmid AV, Gagnon JA. Distinct features of the regenerating heart uncovered through comparative single-cell profiling. Biorxiv : the Preprint Server For Biology. PMID 37461520 DOI: 10.1101/2023.07.04.547574 |
0.104 |
|
2023 |
Rice MC, Elde NC, Gagnon JA, Balla KM. Microbe transmission from pet shop to lab-reared zebrafish reveals a pathogenic birnavirus. Biorxiv : the Preprint Server For Biology. PMID 37693489 DOI: 10.1101/2023.08.28.555169 |
0.086 |
|
2024 |
Osuchukwu O, Gagnon J, Richard J, Craig W, Quaye A. Liposomal bupivacaine in transversus abdominis plane blocks for lower abdominal surgery. Pain Practice : the Official Journal of World Institute of Pain. PMID 38265273 DOI: 10.1111/papr.13347 |
0.022 |
|
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