James A. Gagnon - Related publications

Harvard University, Cambridge, MA, United States 
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Grosswendt S, Kretzmer H, Smith ZD, Kumar AS, Hetzel S, Wittler L, Klages S, Timmermann B, Mukherji S, Meissner A. Epigenetic regulator function through mouse gastrulation. Nature. 584: 102-108. PMID 32728215 DOI: 10.1038/s41586-020-2552-x   
2020 Fuentes R, Tajer B, Kobayashi M, Pelliccia JL, Langdon Y, Abrams EW, Mullins MC. The maternal coordinate system: Molecular-genetics of embryonic axis formation and patterning in the zebrafish. Current Topics in Developmental Biology. 140: 341-389. PMID 32591080 DOI: 10.1016/bs.ctdb.2020.05.002   
2020 Archambault D, Cheong A, Iverson E, Tremblay KD, Mager J. Protein phosphatase 1 regulatory subunit 35 is required for ciliogenesis, notochord morphogenesis, and cell-cycle progression during murine development. Developmental Biology. PMID 32628936 DOI: 10.1016/j.ydbio.2020.06.011   
2020 Wu D, Dean J. Maternal factors regulating preimplantation development in mice. Current Topics in Developmental Biology. 140: 317-340. PMID 32591079 DOI: 10.1016/bs.ctdb.2019.10.006   
2020 Blatt P, Martin ET, Breznak SM, Rangan P. Post-transcriptional gene regulation regulates germline stem cell to oocyte transition during Drosophila oogenesis. Current Topics in Developmental Biology. 140: 3-34. PMID 32591078 DOI: 10.1016/bs.ctdb.2019.10.003   
2020 Avilés-Pagán EE, Kang ASW, Orr-Weaver TL. Identification of New Regulators of the Oocyte-to-Embryo Transition in . G3 (Bethesda, Md.). PMID 32690584 DOI: 10.1534/g3.120.401415   
2020 Chu CW, Masak G, Yang J, Davidson LA. From biomechanics to mechanobiology: Xenopus provides direct access to the physical principles that shape the embryo. Current Opinion in Genetics & Development. 63: 71-77. PMID 32563783 DOI: 10.1016/j.gde.2020.05.011   
2020 Johnson HE, Djabrayan NJV, Shvartsman SY, Toettcher JE. Optogenetic Rescue of a Patterning Mutant. Current Biology : Cb. PMID 32707057 DOI: 10.1016/j.cub.2020.06.059   
2020 Batista MR, Diniz P, Torres A, Murta D, Lopes-da-Costa L, Silva E. Notch signaling in mouse blastocyst development and hatching. Bmc Developmental Biology. 20: 9. PMID 32482162 DOI: 10.1186/s12861-020-00216-2   
2020 Ren Q, Zhong Y, Huang X, Leung B, Xing C, Wang H, Hu G, Wang Y, Shimeld SM, Li G. Step-wise evolution of neural patterning by Hedgehog signalling in chordates. Nature Ecology & Evolution. PMID 32661406 DOI: 10.1038/s41559-020-1248-9   
2020 Owen JP, Kelsh RN, Yates CA. A quantitative modelling approach to zebrafish pigment pattern formation. Elife. 9. PMID 32716296 DOI: 10.7554/eLife.52998   
2020 Liu F, Yamamoto E, Shirahama K, Saitoh T, Aoyama S, Harada Y, Murakami R, Matsuno H. Analysis of Pattern Formation by Colored Petri Nets with Quantitative Regulation of Gene Expression Level. Ieee/Acm Transactions On Computational Biology and Bioinformatics. PMID 32750877 DOI: 10.1109/TCBB.2020.3005392   
2020 Sun X, Zhang R, Chen H, Du X, Chen S, Huang J, Liu M, Xu M, Luo F, Jin M, Su N, Qi H, Yang J, Tan Q, Zhang D, et al. mutation disrupts chondrogenesis and bone ossification in zebrafish model mimicking CATSHL syndrome partially via enhanced Wnt/β-catenin signaling. Theranostics. 10: 7111-7130. PMID 32641982 DOI: 10.7150/thno.45286   
2020 Zhang Q, Liang D, Yue Y, He L, Li N, Jiang D, Hu P, Zhao Q. Axenfeld-Rieger syndrome-associated mutants of the transcription factor FOXC1 abnormally regulate in model zebrafish embryos. The Journal of Biological Chemistry. PMID 32631953 DOI: 10.1074/jbc.RA120.013287   
2020 Jin YH, Liao B, Migaud H, Davie A. Physiological impact and comparison of mutant screening methods in piwil2 KO founder Nile tilapia produced by CRISPR/Cas9 system. Scientific Reports. 10: 12600. PMID 32724054 DOI: 10.1038/s41598-020-69421-0   
2020 Yin H, Peng R, Chen Z, Wang H, Zhang T, Zheng Y. WDR34 mutation from anencephaly patients impaired both SHH and PCP signaling pathways. Journal of Human Genetics. PMID 32576942 DOI: 10.1038/s10038-020-0793-z   
2020 Guzzetta A, Koska M, Rowton M, Sullivan KR, Jacobs-Li J, Kweon J, Hidalgo H, Eckart H, Hoffmann AD, Back R, Lozano S, Moon AM, Basu A, Bressan M, Pott S, et al. Hedgehog-FGF signaling axis patterns anterior mesoderm during gastrulation. Proceedings of the National Academy of Sciences of the United States of America. PMID 32561646 DOI: 10.1073/pnas.1914167117   
2020 Merkle JA, Wittes J, Schüpbach T. Signaling between somatic follicle cells and the germline patterns the egg and embryo of Drosophila. Current Topics in Developmental Biology. 140: 55-86. PMID 32591083 DOI: 10.1016/bs.ctdb.2019.10.004   
2020 Molina MD, Lepage T. Maternal factors regulating symmetry breaking and dorsal-ventral axis formation in the sea urchin embryo. Current Topics in Developmental Biology. 140: 283-316. PMID 32591077 DOI: 10.1016/bs.ctdb.2019.10.007   
2020 Idrees M, Oh SH, Muhammad T, El-Sheikh M, Song SH, Lee KL, Kong IK. Growth Factors, and Cytokines; Understanding the Role of Tyrosine Phosphatase SHP2 in Gametogenesis and Early Embryo Development. Cells. 9. PMID 32751109 DOI: 10.3390/cells9081798   
2020 Kawamura N, Takaoka K, Hamada H, Hadjantonakis AK, Sun-Wada GH, Wada Y. Rab7-Mediated Endocytosis Establishes Patterning of Wnt Activity through Inactivation of Dkk Antagonism. Cell Reports. 31: 107733. PMID 32521258 DOI: 10.1016/j.celrep.2020.107733   
2020 Ngo J, Hashimoto M, Hamada H, Wynshaw-Boris A. Deletion of the Dishevelled family of genes disrupts anterior-posterior axis specification and selectively prevents mesoderm differentiation. Developmental Biology. PMID 32579954 DOI: 10.1016/j.ydbio.2020.05.010   
2020 Mo D, Chen Y, Jiang N, Shen J, Zhang J. Investigation of Isoform Specific Functions of the V-ATPase a Subunit During Wing Development. Frontiers in Genetics. 11: 723. PMID 32754202 DOI: 10.3389/fgene.2020.00723   
2020 Romero-Wolf M, Shin B, Zhou W, Koizumi M, Rothenberg EV, Hosokawa H. Notch2 complements Notch1 to mediate inductive signaling that initiates early T cell development. The Journal of Cell Biology. 219. PMID 32756905 DOI: 10.1083/jcb.202005093   
2020 Matsumoto H, Yasui Y, Ohmori Y, Tanaka W, Ishikawa T, Numa H, Shirasawa K, Taniguchi Y, Tanaka J, Suzuki Y, Hirano HY. CURLED LATER1 encoding the largest subunit of the Elongator complex has a unique role in leaf development and meristem function in rice. The Plant Journal : For Cell and Molecular Biology. PMID 32652697 DOI: 10.1111/tpj.14925   
2020 Yusuff T, Jensen M, Yennawar S, Pizzo L, Karthikeyan S, Gould DJ, Sarker A, Gedvilaite E, Matsui Y, Iyer J, Lai ZC, Girirajan S. Drosophila models of pathogenic copy-number variant genes show global and non-neuronal defects during development. Plos Genetics. 16: e1008792. PMID 32579612 DOI: 10.1371/journal.pgen.1008792   
2020 Feng S, Zacharioudaki E, Millen K, Bray SJ. The SLC36 transporter Pathetic is required for neural stem cell proliferation and for brain growth under nutrition restriction. Neural Development. 15: 10. PMID 32741363 DOI: 10.1186/s13064-020-00148-4   
2020 Bruce AEE, Winklbauer R. Brachyury in the gastrula of basal vertebrates. Mechanisms of Development. 103625. PMID 32526279 DOI: 10.1016/j.mod.2020.103625   
2020 Legué E, Liem KF. Mutations in ciliary trafficking genes affect Shh-dependent neural tube patterning differentially along the A-P axis. Neuroscience. PMID 32682825 DOI: 10.1016/j.neuroscience.2020.07.015   
2020 Nandy N, Roy JK. Rab11 is essential for lgl mediated JNK-Dpp signaling in dorsal closure and epithelial morphogenesis in Drosophila. Developmental Biology. PMID 32562757 DOI: 10.1016/j.ydbio.2020.06.005   
2020 Salazar JL, Yang SA, Yamamoto S. Post-Developmental Roles of Notch Signaling in the Nervous System. Biomolecules. 10. PMID 32630239 DOI: 10.3390/biom10070985   
2020 Wang J, Dahmann C. Establishing compartment boundaries in Drosophila wing imaginal discs: An interplay between selector genes, signaling pathways and cell mechanics. Seminars in Cell & Developmental Biology. PMID 32732129 DOI: 10.1016/j.semcdb.2020.07.008   
2020 Elpidorou M, Best S, Poulter JA, Hartill V, Hobson E, Sheridan E, Johnson CA. Novel loss-of-function mutation in is associated with severe developmental delay and paediatric lethality. Journal of Medical Genetics. PMID 32571899 DOI: 10.1136/jmedgenet-2020-106873   
2020 Anthony CC, Robbins DJ, Ahmed Y, Lee E. Nuclear Regulation of Wnt/β-Catenin Signaling: It's a Complex Situation. Genes. 11. PMID 32759724 DOI: 10.3390/genes11080886   
2020 Zhang A, Noma K, Yan D. Regulation of Gliogenesis by /Atoh1 in . G3 (Bethesda, Md.). PMID 32665354 DOI: 10.1534/g3.120.401547   
2020 Lough KJ, Spitzer DC, Bergman AJ, Wu JJ, Byrd KM, Williams SE. Disruption of the nectin-afadin complex recapitulates features of the human cleft lip/palate syndrome CLPED1. Development (Cambridge, England). PMID 32554531 DOI: 10.1242/dev.189241   
2020 T Sri Ranjani, Gopi Krishna Pitchika, K Yedukondalu, Y Gunavathi, T Daveedu, SB Sainath, GH Philip, Jangampalli Adi Pradeepkiran. Phenotypic and Transcriptomic Changes in Zebrafish (Danio Rerio) embryos/larvae Following Cypermethrin Exposure Chemosphere. 249: 126-148. PMID 32062212 DOI: 10.1016/j.chemosphere.2020.126148   
2020 Technau U. Gastrulation and germ layer formation in the sea anemone Nematostella vectensis and other cnidarians. Mechanisms of Development. 103628. PMID 32603823 DOI: 10.1016/j.mod.2020.103628   
2020 Kopinke D, Norris AM, Mukhopadhyay S. Developmental and regenerative paradigms of cilia regulated hedgehog signaling. Seminars in Cell & Developmental Biology. PMID 32540122 DOI: 10.1016/j.semcdb.2020.05.029   
2020 Wang Y, Wang H, Yan Z, Li G, Hu G, Zhang H, Huang D, Wang Y, Zhang X, Yan Y, Lu Q, Cheng M, Luo S. The critical role of dysregulated Hh-FOXM1-TPX2 signaling in human hepatocellular carcinoma cell proliferation. Cell Communication and Signaling : Ccs. 18: 116. PMID 32723329 DOI: 10.1186/s12964-020-00628-4   
2020 Medina-Martinez O, Haller M, Rosenfeld JA, O'Neill MA, Lamb DJ, Jamrich M. The transcription factor is essential for normal eye development. Disease Models & Mechanisms. PMID 32571845 DOI: 10.1242/dmm.044412   
2020 Godin P, Tsoi M, Paquet M, Boerboom D. YAP and TAZ are required for the postnatal development and the maintenance of the structural integrity of the oviduct. Reproduction (Cambridge, England). PMID 32520726 DOI: 10.1530/REP-20-0202   
2020 Cochrane CR, Vaghjiani V, Szczepny A, Jayasekara WSN, Gonzalez-Rajal A, Kikuchi K, McCaughan GW, Burgess A, Gough DJ, Watkins DN, Cain JE. Trp53 and Rb1 regulate autophagy and ligand-dependent Hedgehog signaling. The Journal of Clinical Investigation. PMID 32568216 DOI: 10.1172/JCI132513   
2020 Vincent E, Villiard E, Sader F, Dhakal S, Kwok B, Roy S. BMP signaling is essential for sustaining proximo-distal progression in regenerating axolotl limbs. Development (Cambridge, England). PMID 32665245 DOI: 10.1242/dev.170829   
2020 Sankaranarayanan M, Weil TT. Granule regulation by phase separation during Drosophila oogenesis. Emerging Topics in Life Sciences. PMID 32573699 DOI: 10.1042/ETLS20190155   
2020 Pan MH, Ju JQ, Li XH, Xu Y, Wang JD, Ren YP, Lu X, Sun SC. Inhibition of survivin induces spindle disorganization, chromosome misalignment, and DNA damage during mouse embryo development. Cell Cycle (Georgetown, Tex.). 1-10. PMID 32687433 DOI: 10.1080/15384101.2020.1794545   
2020 Taira Y, Ikuta Y, Inamori S, Nunome M, Nakano M, Suzuki T, Matsuda Y, Tsudzuki M, Teramoto M, Iida H, Kondoh H. The formation of multiple pituitary pouches from the oral ectoderm causes ectopic lens development in hedgehog signaling-defective avian embryos. Developmental Dynamics : An Official Publication of the American Association of Anatomists. PMID 32633438 DOI: 10.1002/dvdy.222   
2020 Hasan SS, Fischer A. Notch Signaling in Familial Cerebral Cavernous Malformations and Immunohistochemical Detection of Cleaved Notch1 Intracellular Domain. Methods in Molecular Biology (Clifton, N.J.). 2152: 427-435. PMID 32524570 DOI: 10.1007/978-1-0716-0640-7_31   
2020 Lee S, Kang HG, Jeong PS, Nanjidsuren T, Song BS, Jin YB, Lee SR, Kim SU, Sim BW. Effect of Oocyte Quality Assessed by Brilliant Cresyl Blue (BCB) Staining on Cumulus Cell Expansion and Sonic Hedgehog Signaling in Porcine during In Vitro Maturation. International Journal of Molecular Sciences. 21. PMID 32580308 DOI: 10.3390/ijms21124423   
2020 Kindberg A, Hu JK, Bush JO. Forced to communicate: Integration of mechanical and biochemical signaling in morphogenesis. Current Opinion in Cell Biology. 66: 59-68. PMID 32569947 DOI: 10.1016/j.ceb.2020.05.004