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John F.Y. Brookfield, PhD - Publications

Affiliations: 
Institute of Genetics University of Nottingham, Nottingham, England, United Kingdom 
Area:
Genome evolution
Website:
http://www.nottingham.ac.uk/biology/people/john.brookfield
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61 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Brookfield JF. Why are estimates of the strength and direction of natural selection from wild populations not congruent with observed rates of phenotypic change? Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. PMID 27401716 DOI: 10.1002/Bies.201600017  0.303
2014 Brookfield JF. How evolution happens Trends in Ecology & Evolution. 29: 189. DOI: 10.1016/J.Tree.2013.12.005  0.366
2013 Hellen EH, Brookfield JF. Transposable element invasions. Mobile Genetic Elements. 3: e23920. PMID 23734297 DOI: 10.4161/Mge.23920  0.757
2013 Hellen EH, Brookfield JF. Alu elements in primates are preferentially lost from areas of high GC content. Peerj. 1: e78. PMID 23717800 DOI: 10.7717/peerj.78  0.736
2013 Hellen EH, Brookfield JF. The diversity of class II transposable elements in mammalian genomes has arisen from ancestral phylogenetic splits during ancient waves of proliferation through the genome. Molecular Biology and Evolution. 30: 100-8. PMID 22923465 DOI: 10.1093/Molbev/Mss206  0.755
2011 Hellen EH, Brookfield JF. Investigation of the origin and spread of a Mammalian transposable element based on current sequence diversity. Journal of Molecular Evolution. 73: 287-96. PMID 22222953 DOI: 10.1007/S00239-011-9475-Y  0.761
2011 Brookfield JF. Host-parasite relationships in the genome. Bmc Biology. 9: 67. PMID 21985691 DOI: 10.1186/1741-7007-9-67  0.425
2010 Brookfield JF. Experimental evolution: the rate of adaptive evolution. Current Biology : Cb. 20: R23-5. PMID 20152140 DOI: 10.1016/J.Cub.2009.11.044  0.361
2009 Styles P, Brookfield JF. Source gene composition and gene conversion of the AluYh and AluYi lineages of retrotransposons. Bmc Evolutionary Biology. 9: 102. PMID 19442302 DOI: 10.1186/1471-2148-9-102  0.338
2009 Brookfield JF. Evolution and evolvability: celebrating Darwin 200. Biology Letters. 5: 44-6. PMID 19049953 DOI: 10.1098/Rsbl.2008.0639  0.328
2007 Styles P, Brookfield JF. Analysis of the features and source gene composition of the AluYg6 subfamily of human retrotransposons. Bmc Evolutionary Biology. 7: 102. PMID 17603915 DOI: 10.1186/1471-2148-7-102  0.423
2006 McGraw JE, Brookfield JF. The interaction between mobile DNAs and their hosts in a fluctuating environment. Journal of Theoretical Biology. 243: 13-23. PMID 16859716 DOI: 10.1016/J.Jtbi.2006.05.029  0.383
2006 Brookfield JF, Johnson LJ. The evolution of mobile DNAs: when will transposons create phylogenies that look as if there is a master gene? Genetics. 173: 1115-23. PMID 16790583 DOI: 10.1534/Genetics.104.027219  0.436
2006 Johnson LJ, Brookfield JF. A test of the master gene hypothesis for interspersed repetitive DNA sequences. Molecular Biology and Evolution. 23: 235-9. PMID 16221895 DOI: 10.1093/Molbev/Msj034  0.456
2005 Malla S, Dafhnis-Calas F, Brookfield JF, Smith MC, Brown WR. Rearranging the centromere of the human Y chromosome with phiC31 integrase. Nucleic Acids Research. 33: 6101-13. PMID 16246911 DOI: 10.1093/Nar/Gki922  0.317
2005 Brookfield JF. Evolutionary forces generating sequence homogeneity and heterogeneity within retrotransposon families. Cytogenetic and Genome Research. 110: 383-91. PMID 16093690 DOI: 10.1159/000084970  0.44
2005 Brookfield JF. The ecology of the genome - mobile DNA elements and their hosts. Nature Reviews. Genetics. 6: 128-36. PMID 15640810 DOI: 10.1038/Nrg1524  0.421
2005 Brookfield J. Where does animal diversity come from Current Biology. 15. DOI: 10.1016/J.Cub.2005.11.007  0.339
2004 Brookfield JF. Evolutionary genetics: Mobile DNAs as sources of adaptive change? Current Biology : Cb. 14: R344-5. PMID 15120086 DOI: 10.1016/J.Cub.2004.04.021  0.345
2004 MacArthur S, Brookfield JF. Expected rates and modes of evolution of enhancer sequences. Molecular Biology and Evolution. 21: 1064-73. PMID 15014138 DOI: 10.1093/Molbev/Msh105  0.334
2004 Phinchongsakuldit J, MacArthur S, Brookfield JF. Evolution of developmental genes: molecular microevolution of enhancer sequences at the Ubx locus in Drosophila and its impact on developmental phenotypes. Molecular Biology and Evolution. 21: 348-63. PMID 14660693 DOI: 10.1093/Molbev/Msh025  0.363
2003 Brookfield JF. Mobile DNAs: the poacher turned gamekeeper. Current Biology : Cb. 13: R846-7. PMID 14588263 DOI: 10.1016/J.Cub.2003.10.019  0.373
2003 Brookfield JF. Human evolution: a legacy of cannibalism in our genes? Current Biology : Cb. 13: R592-3. PMID 12906809 DOI: 10.1016/S0960-9822(03)00522-0  0.339
2003 Brookfield JF. Genome sequencing: the ripping yarn of the frozen genome. Current Biology : Cb. 13: R552-3. PMID 12867046 DOI: 10.1016/S0960-9822(03)00470-6  0.409
2003 Brookfield JF. Human prehistory: the message from linkage disequilibrium. Current Biology : Cb. 13: R86-7. PMID 12573232 DOI: 10.1016/S0960-9822(03)00032-0  0.354
2003 Edwards RJ, Brookfield JF. Transiently beneficial insertions could maintain mobile DNA sequences in variable environments. Molecular Biology and Evolution. 20: 30-7. PMID 12519903 DOI: 10.1093/Molbev/Msg001  0.56
2003 Brookfield J. What is evolution? Trends in Ecology & Evolution. 18: 67-68. DOI: 10.1016/S0169-5347(02)00007-1  0.312
2002 MacDonald C, Brookfield JF. Intraspecific molecular variation in the seaweed fly Coelopa frigida consistent with behavioural distinctness of British and Swedish populations. Molecular Ecology. 11: 1637-46. PMID 12207715 DOI: 10.1046/J.1365-294X.2002.01559.X  0.308
2002 Nicholas HR, Brookfield JF. The Drosophila melanogaster Ku70 coding sequence is wild-type in mus309 mutants. Genetica. 114: 293-6. PMID 12206368 DOI: 10.1023/A:1016247112011  0.305
2002 Carr M, Soloway JR, Robinson TE, Brookfield JF. Mechanisms regulating the copy numbers of six LTR retrotransposons in the genome of Drosophila melanogaster. Chromosoma. 110: 511-8. PMID 12068968 DOI: 10.1007/S00412-001-0174-0  0.44
2002 Edwards RJ, Sockett RE, Brookfield JF. A simple method for genome-wide screening for advantageous insertions of mobile DNAs in Escherichia coli. Current Biology : Cb. 12: 863-7. PMID 12015126 DOI: 10.1016/S0960-9822(02)00837-0  0.538
2001 Carr M, Soloway JR, Robinson TE, Brookfield JF. An investigation of the cause of low variability on the fourth chromosome of Drosophila melanogaster. Molecular Biology and Evolution. 18: 2260-9. PMID 11719575 DOI: 10.1093/Oxfordjournals.Molbev.A003772  0.303
2001 Brookfield JF. Selection on Alu sequences? Current Biology : Cb. 11: R900-1. PMID 11719231 DOI: 10.1016/S0960-9822(01)00547-4  0.449
2001 Brookfield JF. Population genetics: the signature of selection. Current Biology : Cb. 11: R388-90. PMID 11378402 DOI: 10.1016/S0960-9822(01)00215-9  0.326
2001 Brookfield JF. Evolution: the evolvability enigma. Current Biology : Cb. 11: R106-8. PMID 11231170 DOI: 10.1016/S0960-9822(01)00041-0  0.304
2000 Brookfield JF. Human evolution: how recent were the Y chromosome ancestors? Current Biology : Cb. 10: R722-3. PMID 11050410 DOI: 10.1016/S0960-9822(00)00716-8  0.321
2000 Brookfield JF. Genomic sequencing: the complexity conundrum. Current Biology : Cb. 10: R514-5. PMID 10898997 DOI: 10.1016/S0960-9822(00)00581-9  0.333
2000 Brookfield JF. What determines the rate of sequence evolution? Current Biology : Cb. 10: R410-R0411. PMID 10837241 DOI: 10.1016/S0960-9822(00)00506-6  0.327
1999 Emery PT, Robinson TE, Duddington R, Brookfield JF. What is the impact of transposable elements on host genome variability? Proceedings. Biological Sciences / the Royal Society. 266: 1677-83. PMID 10501038 DOI: 10.1098/Rspb.1999.0831  0.439
1999 Brookfield J. More to DNA than meets the eye Trends in Genetics. 15: 83. DOI: 10.1016/S0168-9525(98)01647-3  0.316
1997 Brookfield JF, Badge RM. Population genetics models of transposable elements. Genetica. 100: 281-94. PMID 9440281 DOI: 10.1007/978-94-011-4898-6_28  0.384
1997 Badge RM, Brookfield JF. The role of host factors in the population dynamics of selfish transposable elements. Journal of Theoretical Biology. 187: 261-71. PMID 9237896 DOI: 10.1006/Jtbi.1997.0432  0.371
1997 Brookfield JF. Importance of ancestral DNA ages. Nature. 388: 134. PMID 9217151 DOI: 10.1038/40543  0.352
1996 Brookfield JF. Genetic evidence for repression of somatic P element movements in Drosophila melanogaster consistent with a role for the KP element. Heredity. 76: 384-91. PMID 8626223 DOI: 10.1038/Hdy.1996.56  0.361
1995 Brookfield JF. Statistical issues in DNA evidence. Electrophoresis. 16: 1665-9. PMID 8582353 DOI: 10.1002/Elps.11501601276  0.313
1995 Brookfield JF. Human evolution. Y-chromosome clues to human ancestry. Current Biology : Cb. 5: 1114-5. PMID 8548280 DOI: 10.1016/S0960-9822(95)00224-7  0.308
1995 Brookfield JF. Molecular evolution. Retroposon revivals. Current Biology : Cb. 5: 255-6. PMID 7780733 DOI: 10.1016/S0960-9822(95)00053-4  0.422
1995 Brookfield JF. The effect of relatedness on likelihood ratios and the use of conservative estimates. Genetica. 96: 13-9. PMID 7607450 DOI: 10.1007/Bf01441147  0.327
1995 Jenkins DL, Ortori CA, Brookfield JF. A test for adaptive change in DNA sequences controlling transcription. Proceedings. Biological Sciences / the Royal Society. 261: 203-7. PMID 7568273 DOI: 10.1098/Rspb.1995.0137  0.404
1994 Ortori CA, Chambers D, Brookfield JF. The molecular basis of instability of the singed(very weak) mutation in Drosophila melanogaster. Genetical Research. 63: 19-26. PMID 8206364 DOI: 10.1017/S0016672300032043  0.332
1994 Brookfield JF, Sharp PM. Neutralism and selectionism face up to DNA data. Trends in Genetics : Tig. 10: 109-11. PMID 8029823 DOI: 10.1016/0168-9525(94)90201-1  0.321
1994 Brookfield JF. Human evolution. A new molecular view of human origins. Current Biology : Cb. 4: 651-2. PMID 7953547 DOI: 10.1016/S0960-9822(00)00145-7  0.352
1994 Brookfield JF. The human Alu SINE sequences--is there a role for selection in their evolution? Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 16: 793-5. PMID 7840755 DOI: 10.1002/Bies.950161104  0.472
1993 Brookfield JF. The generation of sequence similarity in SINEs and LINEs. Trends in Genetics : Tig. 9: 38-9. PMID 8384385 DOI: 10.1016/0168-9525(93)90172-E  0.301
1993 Holden PR, Brookfield JF, Jones P. Cloning and characterization of an ftsZ homologue from a bacterial symbiont of Drosophila melanogaster. Molecular & General Genetics : Mgg. 240: 213-20. PMID 7689140 DOI: 10.1007/Bf00277059  0.346
1992 Brookfield J. The effect of population subdivision on estimates of the likelihood ratio in criminal cases using single-locus DNA probes Heredity. 69: Pt 2/-. PMID 1526854 DOI: 10.1038/Hdy.1992.101  0.311
1989 Brookfield JF, Lewis AP. Somatic reversion of P transposable element insertion mutations in the singed locus of Drosophila melanogaster requiring specific P insertions and a trans- acting factor. Genetical Research. 54: 101-12. PMID 2558960 DOI: 10.1017/S0016672300028470  0.347
1986 Brookfield JF. A model for DNA sequence evolution within transposable element families. Genetics. 112: 393-407. PMID 3000869  0.354
1986 Brookfield JF. The population biology of transposable elements. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 312: 217-26. PMID 2870518  0.39
1984 Brookfield JF, Montgomery E, Langley CH. Apparent absence of transposable elements related to the P elements of D. melanogaster in other species of Drosophila. Nature. 310: 330-2. PMID 6087152 DOI: 10.1038/310330a0  0.55
1983 Langley CH, Brookfield JF, Kaplan N. Transposable elements in mendelian populations. I. A theory. Genetics. 104: 457-71. PMID 17246142  0.338
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