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Daniel Wegmann - Publications

Affiliations: 
2005-2009 University of Fribourg, Switzerland 
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48 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Silva NM, Kreutzer S, Souleles A, Triantaphyllou S, Kotsakis K, Urem-Kotsou D, Halstead P, Efstratiou N, Kotsos S, Karamitrou-Mentessidi G, Adaktylou F, Chondroyianni-Metoki A, Pappa M, Ziota C, Sampson A, ... ... Wegmann D, et al. Ancient mitochondrial diversity reveals population homogeneity in Neolithic Greece and identifies population dynamics along the Danubian expansion axis. Scientific Reports. 12: 13474. PMID 35931723 DOI: 10.1038/s41598-022-16745-8  0.713
2022 Marchi N, Winkelbach L, Schulz I, Brami M, Hofmanová Z, Blöcher J, Reyna-Blanco CS, Diekmann Y, Thiéry A, Kapopoulou A, Link V, Piuz V, Kreutzer S, Figarska SM, Ganiatsou E, ... ... Wegmann D, et al. The genomic origins of the world's first farmers. Cell. PMID 35561686 DOI: 10.1016/j.cell.2022.04.008  0.663
2021 Luqman H, Widmer A, Fior S, Wegmann D. Identifying loci under selection via explicit demographic models. Molecular Ecology Resources. PMID 33964107 DOI: 10.1111/1755-0998.13415  0.347
2020 Galimberti M, Leuenberger C, Wolf B, Szilágyi SM, Foll M, Wegmann D. Detecting Selection from Linked Sites Using an F-Model. Genetics. PMID 33067324 DOI: 10.1534/genetics.120.303780  0.691
2020 Burger J, Link V, Blöcher J, Schulz A, Sell C, Pochon Z, Diekmann Y, Žegarac A, Hofmanová Z, Winkelbach L, Reyna-Blanco CS, Bieker V, Orschiedt J, Brinker U, Scheu A, ... ... Wegmann D, et al. Low Prevalence of Lactase Persistence in Bronze Age Europe Indicates Ongoing Strong Selection over the Last 3,000 Years. Current Biology : Cb. PMID 32888485 DOI: 10.1016/J.Cub.2020.08.033  0.381
2020 Dehasque M, Ávila-Arcos MC, Díez-Del-Molino D, Fumagalli M, Guschanski K, Lorenzen ED, Malaspinas AS, Marques-Bonet T, Martin MD, Murray GGR, Papadopulos AST, Therkildsen NO, Wegmann D, Dalén L, Foote AD. Inference of natural selection from ancient DNA. Evolution Letters. 4: 94-108. PMID 32313686 DOI: 10.1002/evl3.165  0.369
2020 Bresadola L, Link V, Buerkle CA, Lexer C, Wegmann D. Estimating and accounting for genotyping errors in RAD-seq experiments. Molecular Ecology Resources. PMID 32142201 DOI: 10.1111/1755-0998.13153  0.367
2020 Aebischer T, Ibrahim T, Hickisch R, Furrer RD, Leuenberger C, Wegmann D. Apex predators decline after an influx of pastoralists in former Central African Republic hunting zones Biological Conservation. 241: 108326. DOI: 10.1016/J.Biocon.2019.108326  0.319
2019 Gros-Balthazard M, Besnard G, Sarah G, Holtz Y, Leclercq J, Santoni S, Wegmann D, Glémin S, Khadari B. Evolutionary transcriptomics reveals the origins of olives and the genomic changes associated with their domestication. The Plant Journal : For Cell and Molecular Biology. PMID 31192486 DOI: 10.1111/Tpj.14435  0.417
2019 Bresadola L, Caseys C, Castiglione S, Buerkle AC, Wegmann D, Lexer C. Admixture mapping in interspecific Populus hybrids identifies classes of genomic architectures for phytochemical, morphological and growth traits. The New Phytologist. PMID 31104343 DOI: 10.1111/Nph.15930  0.396
2018 Scheib CL, Li H, Desai T, Link V, Kendall C, Dewar G, Griffith PW, Mörseburg A, Johnson JR, Potter A, Kerr SL, Endicott P, Lindo J, Haber M, Xue Y, ... ... Wegmann D, et al. Ancient human parallel lineages within North America contributed to a coastal expansion. Science (New York, N.Y.). 360: 1024-1027. PMID 29853687 DOI: 10.1126/Science.Aar6851  0.451
2018 Veeramah KR, Rott A, Groß M, van Dorp L, López S, Kirsanow K, Sell C, Blöcher J, Wegmann D, Link V, Hofmanová Z, Peters J, Trautmann B, Gairhos A, Haberstroh J, et al. Population genomic analysis of elongated skulls reveals extensive female-biased immigration in Early Medieval Bavaria. Proceedings of the National Academy of Sciences of the United States of America. PMID 29531040 DOI: 10.1073/Pnas.1719880115  0.508
2017 Gros-Balthazard M, Galimberti M, Kousathanas A, Newton C, Ivorra S, Paradis L, Vigouroux Y, Carter R, Tengberg M, Battesti V, Santoni S, Falquet L, Pintaud JC, Terral JF, Wegmann D. The Discovery of Wild Date Palms in Oman Reveals a Complex Domestication History Involving Centers in the Middle East and Africa. Current Biology : Cb. PMID 28712568 DOI: 10.1016/J.Cub.2017.06.045  0.771
2017 Duchen P, Leuenberger C, Szilagyi SM, Harmon L, Eastman J, Schweizer M, Wegmann D. Inference of evolutionary jumps in large phylogenies using Levy processes. Systematic Biology. PMID 28204787 DOI: 10.1093/Sysbio/Syx028  0.402
2017 Aebischer T, Siguindo G, Rochat E, Arandjelovic M, Heilman A, Hickisch R, Vigilant L, Joost S, Wegmann D. First quantitative survey delineates the distribution of chimpanzees in the Eastern Central African Republic Biological Conservation. 213: 84-94. DOI: 10.1016/J.Biocon.2017.06.031  0.428
2016 Kousathanas A, Leuenberger C, Link V, Sell C, Burger J, Wegmann D. Inferring Heterozygosity from Ancient and Low Coverage Genomes. Genetics. PMID 27821432 DOI: 10.1534/Genetics.116.189985  0.758
2016 Broushaki F, Thomas MG, Link V, López S, van Dorp L, Kirsanow K, Hofmanová Z, Diekmann Y, Cassidy LM, Díez-Del-Molino D, Kousathanas A, Sell C, Robson HK, Martiniano R, Blöcher J, ... ... Wegmann D, et al. Early Neolithic genomes from the eastern Fertile Crescent. Science (New York, N.Y.). PMID 27417496 DOI: 10.1126/Science.Aaf7943  0.78
2016 Hofmanová Z, Kreutzer S, Hellenthal G, Sell C, Diekmann Y, Díez-Del-Molino D, van Dorp L, López S, Kousathanas A, Link V, Kirsanow K, Cassidy LM, Martiniano R, Strobel M, Scheu A, ... ... Wegmann D, et al. Early farmers from across Europe directly descended from Neolithic Aegeans. Proceedings of the National Academy of Sciences of the United States of America. PMID 27274049 DOI: 10.1073/Pnas.1523951113  0.764
2016 Kousathanas A, Leuenberger C, Helfer J, Quinodoz M, Foll M, Wegmann D. Likelihood-Free Inference in High-Dimensional Models. Genetics. 203: 893-904. PMID 27052569 DOI: 10.1534/Genetics.116.187567  0.759
2016 Ferrer-Admetlla A, Leuenberger C, Jensen JD, Wegmann D. An Approximate Markov Model for the Wright-Fisher Diffusion and Its Application to Time Series Data. Genetics. 203: 831-46. PMID 27038112 DOI: 10.1534/Genetics.115.184598  0.685
2016 Christe C, Stölting KN, Bresadola L, Fussi B, Heinze B, Wegmann D, Lexer C. Selection against recombinant hybrids maintains reproductive isolation in hybridizing Populus species despite F1 fertility and recurrent gene flow. Molecular Ecology. PMID 26880192 DOI: 10.1111/Mec.13587  0.418
2016 Liu Y, Hu J, Li SH, Duchen P, Wegmann D, Schweizer M. Sino-Himalayan mountains act as cradles of diversity and immigration centres in the diversification of parrotbills (Paradoxornithidae) Journal of Biogeography. DOI: 10.1111/Jbi.12738  0.357
2015 Bruford MW, Ginja C, Hoffmann I, Joost S, Orozco-terWengel P, Alberto FJ, Amaral AJ, Barbato M, Biscarini F, Colli L, Costa M, Curik I, Duruz S, Ferenčaković M, Fischer D, ... ... Wegmann D, et al. Prospects and challenges for the conservation of farm animal genomic resources, 2015-2025. Frontiers in Genetics. 6: 314. PMID 26539210 DOI: 10.3389/Fgene.2015.00314  0.42
2014 Adrion JR, Kousathanas A, Pascual M, Burrack HJ, Haddad NM, Bergland AO, Machado H, Sackton TB, Schlenke TA, Watada M, Wegmann D, Singh ND. Drosophila suzukii: the genetic footprint of a recent, worldwide invasion. Molecular Biology and Evolution. 31: 3148-63. PMID 25158796 DOI: 10.1093/Molbev/Msu246  0.783
2014 Dussex N, Wegmann D, Robertson BC. Postglacial expansion and not human influence best explains the population structure in the endangered kea (Nestor notabilis). Molecular Ecology. 23: 2193-209. PMID 24684223 DOI: 10.1111/Mec.12729  0.512
2014 Gray MM, Wegmann D, Haasl RJ, White MA, Gabriel SI, Searle JB, Cuthbert RJ, Ryan PG, Payseur BA. Demographic history of a recent invasion of house mice on the isolated Island of Gough. Molecular Ecology. 23: 1923-39. PMID 24617968 DOI: 10.1111/Mec.12715  0.442
2014 Foll M, Poh YP, Renzette N, Ferrer-Admetlla A, Bank C, Shim H, Malaspinas AS, Ewing G, Liu P, Wegmann D, Caffrey DR, Zeldovich KB, Bolon DN, Wang JP, Kowalik TF, et al. Influenza virus drug resistance: a time-sampled population genetics perspective. Plos Genetics. 10: e1004185. PMID 24586206 DOI: 10.1371/Journal.Pgen.1004185  0.705
2014 Zawistowski M, Reppell M, Wegmann D, St Jean PL, Ehm MG, Nelson MR, Novembre J, Zöllner S. Analysis of rare variant population structure in Europeans explains differential stratification of gene-based tests. European Journal of Human Genetics : Ejhg. 22: 1137-44. PMID 24398795 DOI: 10.1038/Ejhg.2013.297  0.387
2014 Wegmann D, Currat M. Recipient of the 2013 Molecular Ecology Prize: Laurent Excoffier. Molecular Ecology. 23: 16-9. PMID 24283664 DOI: 10.1111/Mec.12604  0.605
2013 Schaibley VM, Zawistowski M, Wegmann D, Ehm MG, Nelson MR, St Jean PL, Abecasis GR, Novembre J, Zöllner S, Li JZ. The influence of genomic context on mutation patterns in the human genome inferred from rare variants. Genome Research. 23: 1974-84. PMID 23990608 DOI: 10.1101/Gr.154971.113  0.417
2013 Chu JH, Wegmann D, Yeh CF, Lin RC, Yang XJ, Lei FM, Yao CT, Zou FS, Li SH. Inferring the geographic mode of speciation by contrasting autosomal and sex-linked genetic diversity. Molecular Biology and Evolution. 30: 2519-30. PMID 23955517 DOI: 10.1093/Molbev/Mst140  0.449
2012 Nelson MR, Wegmann D, Ehm MG, Kessner D, St Jean P, Verzilli C, Shen J, Tang Z, Bacanu SA, Fraser D, Warren L, Aponte J, Zawistowski M, Liu X, Zhang H, et al. An abundance of rare functional variants in 202 drug target genes sequenced in 14,002 people. Science (New York, N.Y.). 337: 100-4. PMID 22604722 DOI: 10.1126/Science.1217876  0.467
2012 Stahl EA, Wegmann D, Trynka G, Gutierrez-Achury J, Do R, Voight BF, Kraft P, Chen R, Kallberg HJ, Kurreeman FA, Kathiresan S, Wijmenga C, Gregersen PK, et al. Bayesian inference analyses of the polygenic architecture of rheumatoid arthritis. Nature Genetics. 44: 483-9. PMID 22446960 DOI: 10.1038/Ng.2232  0.373
2012 Rubio JP, Topp S, Warren L, St Jean PL, Wegmann D, Kessner D, Novembre J, Shen J, Fraser D, Aponte J, Nangle K, Cardon LR, Ehm MG, Chissoe SL, Whittaker JC, et al. Deep sequencing of the LRRK2 gene in 14,002 individuals reveals evidence of purifying selection and independent origin of the p.Arg1628Pro mutation in Europe. Human Mutation. 33: 1087-98. PMID 22415848 DOI: 10.1002/Humu.22075  0.384
2012 Slater GJ, Harmon LJ, Wegmann D, Joyce P, Revell LJ, Alfaro ME. Fitting models of continuous trait evolution to incompletely sampled comparative data using approximate Bayesian computation. Evolution; International Journal of Organic Evolution. 66: 752-62. PMID 22380438 DOI: 10.1111/J.1558-5646.2011.01474.X  0.427
2012 Veeramah KR, Wegmann D, Woerner A, Mendez FL, Watkins JC, Destro-Bisol G, Soodyall H, Louie L, Hammer MF. An early divergence of KhoeSan ancestors from those of other modern humans is supported by an ABC-based analysis of autosomal resequencing data. Molecular Biology and Evolution. 29: 617-30. PMID 21890477 DOI: 10.1093/Molbev/Msr212  0.468
2011 Wegmann D, Kessner DE, Veeramah KR, Mathias RA, Nicolae DL, Yanek LR, Sun YV, Torgerson DG, Rafaels N, Mosley T, Becker LC, Ruczinski I, Beaty TH, Kardia SL, Meyers DA, et al. Recombination rates in admixed individuals identified by ancestry-based inference. Nature Genetics. 43: 847-53. PMID 21775992 DOI: 10.1038/Ng.894  0.378
2011 Veeramah KR, Tönjes A, Kovacs P, Gross A, Wegmann D, Geary P, Gasperikova D, Klimes I, Scholz M, Novembre J, Stumvoll M. Genetic variation in the Sorbs of eastern Germany in the context of broader European genetic diversity. European Journal of Human Genetics : Ejhg. 19: 995-1001. PMID 21559053 DOI: 10.1038/Ejhg.2011.65  0.47
2011 Thalmann O, Wegmann D, Spitzner M, Arandjelovic M, Guschanski K, Leuenberger C, Bergl RA, Vigilant L. Historical sampling reveals dramatic demographic changes in western gorilla populations. Bmc Evolutionary Biology. 11: 85. PMID 21457536 DOI: 10.1186/1471-2148-11-85  0.491
2010 Peter BM, Wegmann D, Excoffier L. Distinguishing between population bottleneck and population subdivision by a Bayesian model choice procedure. Molecular Ecology. 19: 4648-60. PMID 20735743 DOI: 10.1111/J.1365-294X.2010.04783.X  0.787
2010 Wegmann D, Leuenberger C, Neuenschwander S, Excoffier L. ABCtoolbox: a versatile toolkit for approximate Bayesian computations. Bmc Bioinformatics. 11: 116. PMID 20202215 DOI: 10.1186/1471-2105-11-116  0.703
2010 Wegmann D, Excoffier L. Bayesian inference of the demographic history of chimpanzees. Molecular Biology and Evolution. 27: 1425-35. PMID 20118191 DOI: 10.1093/Molbev/Msq028  0.689
2010 Ray N, Wegmann D, Fagundes NJ, Wang S, Ruiz-Linares A, Excoffier L. A statistical evaluation of models for the initial settlement of the american continent emphasizes the importance of gene flow with Asia. Molecular Biology and Evolution. 27: 337-45. PMID 19805438 DOI: 10.1093/Molbev/Msp238  0.744
2010 Leuenberger C, Wegmann D. Bayesian computation and model selection without likelihoods. Genetics. 184: 243-52. PMID 19786619 DOI: 10.1534/Genetics.109.109058  0.395
2009 Wegmann D, Leuenberger C, Excoffier L. Efficient approximate Bayesian computation coupled with Markov chain Monte Carlo without likelihood. Genetics. 182: 1207-18. PMID 19506307 DOI: 10.1534/Genetics.109.102509  0.605
2009 Hofer T, Ray N, Wegmann D, Excoffier L. Large allele frequency differences between human continental groups are more likely to have occurred by drift during range expansions than by selection. Annals of Human Genetics. 73: 95-108. PMID 19040659 DOI: 10.1111/J.1469-1809.2008.00489.X  0.688
2008 Wegmann D, Dupanloup I, Excoffier L. Width of gene expression profile drives alternative splicing. Plos One. 3: e3587. PMID 18974852 DOI: 10.1371/Journal.Pone.0003587  0.719
2006 Wegmann D, Currat M, Excoffier L. Molecular diversity after a range expansion in heterogeneous environments. Genetics. 174: 2009-20. PMID 17028329 DOI: 10.1534/Genetics.106.062851  0.744
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