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Yu Tom Gao, Ph.D. - Publications

Affiliations: 
2009-2014 Chemistry The Scripps Research Institute, Scripps Florida 
 2014-2018 Molecular Medicine The Scripps Research Institute, California, USA 
 2018- College of Pharmacy University of Illinois at Chicago, Chicago, IL, United States 
Area:
Chemical Biology, Proteomics, Bioinformatics
Website:
pepchem.org
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17 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Maldonado AC, Haughan MA, Khin M, Ekiert J, Zhang Z, Lantvit D, Al Subeh ZY, Pierre HC, Salkovski M, Hirschhorn T, Gao Y, Pearce CJ, Stockwell BR, Aldrich LN, Oberlies NH, et al. Probing the Cytotoxic Signaling Induced by Eupenifeldin in Ovarian Cancer Models. Journal of Natural Products. PMID 37643353 DOI: 10.1021/acs.jnatprod.3c00186  0.361
2022 Shao X, Grams C, Gao Y. Sequence Coverage Visualizer: A Web Application for Protein Sequence Coverage 3D Visualization. Journal of Proteome Research. PMID 36511722 DOI: 10.1021/acs.jproteome.2c00358  0.539
2022 Zhang Z, Gao Y. Evaluation of the Binding Preference of Microtubes for Nanoproteomics Sample Preparation. Journal of Proteome Research. PMID 36455010 DOI: 10.1021/acs.jproteome.2c00477  0.433
2022 Shao X, Gomez CD, Kapoor N, Considine JM, Grams C, Gao YT, Naba A. MatrisomeDB 2.0: 2023 updates to the ECM-protein knowledge database. Nucleic Acids Research. PMID 36399478 DOI: 10.1093/nar/gkac1009  0.561
2022 Laczkovich I, Mangano K, Shao X, Hockenberry AJ, Gao Y, Mankin A, Vázquez-Laslop N, Federle MJ. Discovery of Unannotated Small Open Reading Frames in Streptococcus pneumoniae D39 Involved in Quorum Sensing and Virulence Using Ribosome Profiling. Mbio. e0124722. PMID 35852327 DOI: 10.1128/mbio.01247-22  0.543
2020 Mangano K, Florin T, Shao X, Klepacki D, Chelysheva I, Ignatova Z, Gao Y, Mankin AS, Vázquez-Laslop N. Genome-wide effects of the antimicrobial peptide apidaecin on translation termination in bacteria. Elife. 9. PMID 33031031 DOI: 10.7554/eLife.62655  0.559
2019 Gao Y, Dasgupta C, Huang L, Song R, Zhang Z, Zhang L. Multi-Omics Integration Reveals Short and Long-Term Effects of Gestational Hypoxia on the Heart Development. Cells. 8. PMID 31835778 DOI: 10.3390/Cells8121608  0.419
2019 Shao X, Taha IN, Clauser KR, Gao YT, Naba A. MatrisomeDB: the ECM-protein knowledge database. Nucleic Acids Research. PMID 31586405 DOI: 10.1093/Nar/Gkz849  0.555
2015 Xu T, Park SK, Venable JD, Wohlschlegel JA, Diedrich JK, Cociorva D, Lu B, Liao L, Hewel J, Han X, Wong CC, Fonslow B, Delahunty C, Gao Y, Shah H, et al. ProLuCID: An improved SEQUEST-like algorithm with enhanced sensitivity and specificity. Journal of Proteomics. PMID 26171723 DOI: 10.1016/J.Jprot.2015.07.001  0.529
2015 Doran TM, Gao Y, Simanski S, McEnaney P, Kodadek T. High affinity binding of conformationally constrained synthetic oligomers to an antigen-specific antibody: Discovery of a diagnostically useful synthetic ligand for murine Type 1 diabetes autoantibodies. Bioorganic & Medicinal Chemistry Letters. 25: 4910-7. PMID 26067174 DOI: 10.1016/J.Bmcl.2015.05.046  0.624
2015 Gao Y, Kodadek T. Direct comparison of linear and macrocyclic compound libraries as a source of protein ligands. Acs Combinatorial Science. 17: 190-5. PMID 25623285 DOI: 10.1021/Co500161C  0.573
2015 Gao Y, Amar S, Pahwa S, Fields G, Kodadek T. Rapid lead discovery through iterative screening of one bead one compound libraries. Acs Combinatorial Science. 17: 49-59. PMID 25434974 DOI: 10.1021/Co500154E  0.564
2015 Sarma BK, Liu X, Wu H, Gao Y, Kodadek T. Solid phase synthesis of 1,3,4-oxadiazin-5 (6R)-one and 1,3,4-oxadiazol-2-one scaffolds from acyl hydrazides. Organic & Biomolecular Chemistry. 13: 59-63. PMID 25354697 DOI: 10.1039/C4Ob01883D  0.661
2014 Gao Y, Kodadek T. Split-and-pool synthesis and characterization of peptide tertiary amide library Journal of Visualized Experiments. PMID 24998250 DOI: 10.3791/51299  0.614
2014 Doran TM, Gao Y, Mendes K, Dean S, Simanski S, Kodadek T. Utility of redundant combinatorial libraries in distinguishing high and low quality screening hits. Acs Combinatorial Science. 16: 259-70. PMID 24749624 DOI: 10.1021/Co500030F  0.683
2013 Rzuczek SG, Gao Y, Tang ZZ, Thornton CA, Kodadek T, Disney MD. Features of modularly assembled compounds that impart bioactivity against an RNA target. Acs Chemical Biology. 8: 2312-21. PMID 24032410 DOI: 10.1021/Cb400265Y  0.531
2013 Gao Y, Kodadek T. Synthesis and screening of stereochemically diverse combinatorial libraries of peptide tertiary amides Chemistry and Biology. 20: 360-369. PMID 23521794 DOI: 10.1016/J.Chembiol.2013.01.013  0.603
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