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Justus M Kebschull - Publications

Affiliations: 
2011-2017 Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 
 2017-2020 Stanford University, Palo Alto, CA 
 2021- Johns Hopkins University, Baltimore, MD 
Area:
tool development, circuit evolution, connectomics
Website:
kebschull-lab.org
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19/25 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Chen Y, Chen X, Baserdem B, Zhan H, Li Y, Davis MB, Kebschull JM, Zador AM, Koulakov AA, Albeanu DF. High-throughput sequencing of single neuron projections reveals spatial organization in the olfactory cortex. Cell. 185: 4117-4134.e28. PMID 36306734 DOI: 10.1016/j.cell.2022.09.038  0.731
2021 Klingler E, Tomasello U, Prados J, Kebschull JM, Contestabile A, Galiñanes GL, Fièvre S, Santinha A, Platt R, Huber D, Dayer A, Bellone C, Jabaudon D. Temporal controls over inter-areal cortical projection neuron fate diversity. Nature. 599: 453-457. PMID 34754107 DOI: 10.1038/s41586-021-04048-3  0.438
2021 McLaughlin CN, Brbić M, Xie Q, Li T, Horns F, Kolluru SS, Kebschull JM, Vacek D, Xie A, Li J, Jones RC, Leskovec J, Quake SR, Luo L, Li H. Single-cell transcriptomes of developing and adult olfactory receptor neurons in . Elife. 10. PMID 33555999 DOI: 10.7554/eLife.63856  0.788
2020 Huang L, Kebschull JM, Fürth D, Musall S, Kaufman MT, Churchland AK, Zador AM. BRICseq Bridges Brain-wide Interregional Connectivity to Neural Activity and Gene Expression in Single Animals. Cell. 183: 2040. PMID 33357401 DOI: 10.1016/j.cell.2020.12.009  0.725
2020 Lui JH, Nguyen ND, Grutzner SM, Darmanis S, Peixoto D, Wagner MJ, Allen WE, Kebschull JM, Richman EB, Ren J, Newsome WT, Quake SR, Luo L. Differential encoding in prefrontal cortex projection neuron classes across cognitive tasks. Cell. PMID 33338423 DOI: 10.1016/j.cell.2020.11.046  0.727
2020 Kebschull JM, Richman EB, Ringach N, Friedmann D, Albarran E, Kolluru SS, Jones RC, Allen WE, Wang Y, Cho SW, Zhou H, Ding JB, Chang HY, Deisseroth K, Quake SR, et al. Cerebellar nuclei evolved by repeatedly duplicating a conserved cell-type set. Science (New York, N.Y.). 370. PMID 33335034 DOI: 10.1126/science.abd5059  0.77
2020 Huang L, Kebschull JM, Fürth D, Musall S, Kaufman MT, Churchland AK, Zador AM. BRICseq Bridges Brain-wide Interregional Connectivity to Neural Activity and Gene Expression in Single Animals. Cell. PMID 32619423 DOI: 10.1016/J.Cell.2020.05.029  0.749
2020 Friedmann D, Pun A, Adams EL, Lui JH, Kebschull JM, Grutzner SM, Castagnola C, Tessier-Lavigne M, Luo L. Mapping mesoscale axonal projections in the mouse brain using a 3D convolutional network. Proceedings of the National Academy of Sciences of the United States of America. PMID 32358193 DOI: 10.1073/Pnas.1918465117  0.777
2020 Charles AS, Falk B, Turner N, Pereira TD, Tward D, Pedigo BD, Chung J, Burns R, Ghosh SS, Kebschull JM, Silversmith W, Vogelstein JT. Toward Community-Driven Big Open Brain Science: Open Big Data and Tools for Structure, Function, and Genetics. Annual Review of Neuroscience. PMID 32283996 DOI: 10.1146/Annurev-Neuro-100119-110036  0.317
2020 Li H, Li T, Horns F, Li J, Xie Q, Xu C, Wu B, Kebschull JM, McLaughlin CN, Kolluru SS, Jones RC, Vacek D, Xie A, Luginbuhl DJ, Quake SR, et al. Single-Cell Transcriptomes Reveal Diverse Regulatory Strategies for Olfactory Receptor Expression and Axon Targeting. Current Biology : Cb. PMID 32059767 DOI: 10.1016/J.Cub.2020.01.049  0.744
2020 Dore K, Pao Y, Soria Lopez J, Aronson S, Zhan H, Ghosh S, Merrill S, Zador AM, Malinow R, Kebschull JM. SYNPLA, a method to identify synapses displaying plasticity after learning. Proceedings of the National Academy of Sciences of the United States of America. PMID 31974314 DOI: 10.1073/Pnas.1919911117  0.592
2019 Chen X, Sun YC, Zhan H, Kebschull JM, Fischer S, Matho K, Huang ZJ, Gillis J, Zador AM. High-Throughput Mapping of Long-Range Neuronal Projection Using In Situ Sequencing. Cell. 179: 772-786.e19. PMID 31626774 DOI: 10.1016/J.Cell.2019.09.023  0.78
2019 Kebschull JM. DNA sequencing in high-throughput neuroanatomy. Journal of Chemical Neuroanatomy. 101653. PMID 31173871 DOI: 10.1016/J.Jchemneu.2019.101653  0.491
2018 Kebschull JM, Zador AM. Cellular barcoding: lineage tracing, screening and beyond. Nature Methods. PMID 30377352 DOI: 10.1038/S41592-018-0185-X  0.621
2018 Han Y, Kebschull JM, Campbell RAA, Cowan D, Imhof F, Zador AM, Mrsic-Flogel TD. The logic of single-cell projections from visual cortex. Nature. PMID 29590093 DOI: 10.1038/Nature26159  0.715
2017 Peikon ID, Kebschull JM, Vagin VV, Ravens DI, Sun YC, Brouzes E, Corrêa IR, Bressan D, Zador AM. Using high-throughput barcode sequencing to efficiently map connectomes. Nucleic Acids Research. PMID 28449067 DOI: 10.1093/Nar/Gkx292  0.744
2016 Kebschull JM, Garcia da Silva P, Reid AP, Peikon ID, Albeanu DF, Zador AM. High-Throughput Mapping of Single-Neuron Projections by Sequencing of Barcoded RNA. Neuron. PMID 27545715 DOI: 10.1016/J.Neuron.2016.07.036  0.764
2016 Kebschull JM, Garcia da Silva P, Zador AM. A New Defective Helper RNA to Produce Recombinant Sindbis Virus that Infects Neurons but does not Propagate. Frontiers in Neuroanatomy. 10: 56. PMID 27252627 DOI: 10.3389/Fnana.2016.00056  0.615
2015 Kebschull JM, Zador AM. Sources of PCR-induced distortions in high-throughput sequencing data sets. Nucleic Acids Research. PMID 26187991 DOI: 10.1093/Nar/Gkv717  0.61
Low-probability matches (unlikely to be authored by this person)
2023 Clifton K, Anant M, Aihara G, Atta L, Aimiuwu OK, Kebschull JM, Miller MI, Tward D, Fan J. STalign: Alignment of spatial transcriptomics data using diffeomorphic metric mapping. Nature Communications. 14: 8123. PMID 38065970 DOI: 10.1038/s41467-023-43915-7  0.266
2013 Nowak M, Krämer B, Haupt M, Papapanou PN, Kebschull J, Hoffmann P, Schmidt-Wolf IG, Jepsen S, Brossart P, Perner S, Kebschull M. Activation of invariant NK T cells in periodontitis lesions. Journal of Immunology (Baltimore, Md. : 1950). 190: 2282-91. PMID 23365081 DOI: 10.4049/Jimmunol.1201215  0.255
2023 Kebschull JM, Casoni F, Consalez GG, Goldowitz D, Hawkes R, Ruigrok TJH, Schilling K, Wingate R, Wu J, Yeung J, Uusisaari MY. Cerebellum Lecture: the Cerebellar Nuclei-Core of the Cerebellum. Cerebellum (London, England). PMID 36781689 DOI: 10.1007/s12311-022-01506-0  0.252
2023 Clifton K, Anant M, Aimiuwu OK, Kebschull JM, Miller MI, Tward D, Fan J. Alignment of spatial transcriptomics data using diffeomorphic metric mapping. Biorxiv : the Preprint Server For Biology. PMID 37090640 DOI: 10.1101/2023.04.11.534630  0.242
2022 Faltine-Gonzalez DZ, Kebschull JM. A mosaic of new and old cell types. Science (New York, N.Y.). 377: 1043-1044. PMID 36048955 DOI: 10.1126/science.add9465  0.233
2022 Li SB, Damonte VM, Chen C, Wang GX, Kebschull JM, Yamaguchi H, Bian WJ, Purmann C, Pattni R, Urban AE, Mourrain P, Kauer JA, Scherrer G, de Lecea L. Hyperexcitable arousal circuits drive sleep instability during aging. Science (New York, N.Y.). 375: eabh3021. PMID 35201886 DOI: 10.1126/science.abh3021  0.211
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