| Year |
Citation |
Score |
| 2022 |
Feiss M, Young R, Ramsey J, Adhya S, Georgopoulos C, Hendrix RW, Hatfull GF, Gilcrease EB, Casjens SR. Hybrid Vigor: Importance of Hybrid λ Phages in Early Insights in Molecular Biology. Microbiology and Molecular Biology Reviews : Mmbr. e0012421. PMID 36165780 DOI: 10.1128/mmbr.00124-21 |
0.53 |
|
| 2020 |
Bettridge K, Verma S, Weng X, Adhya S, Xiao J. Single-molecule tracking reveals that the nucleoid-associated protein HU plays a dual-role in maintaining proper nucleoid volume through differential interactions with chromosomal DNA. Molecular Microbiology. PMID 32640056 DOI: 10.1111/Mmi.14572 |
0.35 |
|
| 2020 |
Remesh SG, Verma SC, Chen JH, Ekman AA, Larabell CA, Adhya S, Hammel M. Nucleoid remodeling during environmental adaptation is regulated by HU-dependent DNA bundling. Nature Communications. 11: 2905. PMID 32518228 DOI: 10.1038/S41467-020-16724-5 |
0.398 |
|
| 2020 |
Dhungana G, Malla R, Rajaure M, Adhya S. Complete Genome Sequence of Myophage Ec_Makalu_002, Which Infects Uropathogenic Escherichia coli. Microbiology Resource Announcements. 9. PMID 32001571 DOI: 10.1128/MRA.01530-19 |
0.693 |
|
| 2020 |
Hesse S, Rajaure M, Wall E, Johnson J, Bliskovsky V, Gottesman S, Adhya S. Phage Resistance in Multidrug-Resistant Klebsiella pneumoniae ST258 Evolves via Diverse Mutations That Culminate in Impaired Adsorption. Mbio. 11. PMID 31992617 DOI: 10.1128/Mbio.02530-19 |
0.737 |
|
| 2019 |
Rajaure M, Adhya S. Molecular Basis of Phage Communication. Molecular Cell. 74: 1-2. PMID 30951649 DOI: 10.1016/J.Molcel.2019.03.015 |
0.72 |
|
| 2018 |
Remesh SG, Verma S, Qian Z, Adhya S, Hammel M. Regulating bacterial gene expression with small molecules by altering DNA supercoiling Acta Crystallographica Section A. 74. DOI: 10.1107/S0108767318097179 |
0.358 |
|
| 2017 |
Lee S, Lewis DEA, Adhya S. The Developmental Switch in Bacteriophage λ: A Critical Role of the Cro Protein. Journal of Molecular Biology. PMID 29158090 DOI: 10.1016/J.Jmb.2017.11.005 |
0.32 |
|
| 2017 |
Qian Z, Zhurkin VB, Adhya S. DNA-RNA interactions are critical for chromosome condensation in Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. PMID 29087325 DOI: 10.1073/Pnas.1711285114 |
0.381 |
|
| 2016 |
Qian Z, Trostel A, Lewis DE, Lee SJ, He X, Stringer AM, Wade JT, Schneider TD, Durfee T, Adhya S. Genome-Wide Transcriptional Regulation and Chromosome Structural Arrangement by GalR in E. coli. Frontiers in Molecular Biosciences. 3: 74. PMID 27900321 DOI: 10.3389/Fmolb.2016.00074 |
0.369 |
|
| 2016 |
Qian Z, Adhya S. DNA repeat sequences: diversity and versatility of functions. Current Genetics. PMID 27743028 DOI: 10.1007/S00294-016-0654-7 |
0.347 |
|
| 2016 |
Lewis D, Gussin GN, Adhya S. New Insights into the Phage Genetic Switch: Effects of Bacteriophage Lambda Operator Mutations on DNA Looping and Regulation of PR, PL, and PRM. Journal of Molecular Biology. PMID 27670714 DOI: 10.1016/J.Jmb.2016.08.027 |
0.333 |
|
| 2016 |
Hammel M, Amlanjyoti D, Reyes FE, Chen JH, Parpana R, Tang HY, Larabell CA, Tainer JA, Adhya S. HU multimerization shift controls nucleoid compaction. Science Advances. 2: e1600650. PMID 27482541 DOI: 10.1107/S0108767317099019 |
0.375 |
|
| 2016 |
Lal A, Dhar A, Trostel A, Kouzine F, Seshasayee AS, Adhya S. Genome scale patterns of supercoiling in a bacterial chromosome. Nature Communications. 7: 11055. PMID 27025941 DOI: 10.1038/Ncomms11055 |
0.35 |
|
| 2016 |
Tolstorukov MY, Virnik K, Zhurkin VB, Adhya S. Organization of DNA in a bacterial nucleoid. Bmc Microbiology. 16: 22. PMID 26897370 DOI: 10.1186/S12866-016-0637-3 |
0.394 |
|
| 2015 |
Lewis DE, Adhya S. Molecular Mechanisms of Transcription Initiation at gal Promoters and their Multi-Level Regulation by GalR, CRP and DNA Loop. Biomolecules. 5: 2782-807. PMID 26501343 DOI: 10.3390/biom5042782 |
0.309 |
|
| 2015 |
Qian Z, Macvanin M, Dimitriadis EK, He X, Zhurkin V, Adhya S. A New Noncoding RNA Arranges Bacterial Chromosome Organization. Mbio. 6. PMID 26307168 DOI: 10.1128/Mbio.00998-15 |
0.388 |
|
| 2015 |
Lewis DE, Le P, Adhya S. Differential role of base pairs on gal promoters strength. Journal of Molecular Biology. 427: 792-806. PMID 25543084 DOI: 10.1016/J.Jmb.2014.12.010 |
0.385 |
|
| 2014 |
Adhya S, Merril CR, Biswas B. Therapeutic and prophylactic applications of bacteriophage components in modern medicine Cold Spring Harbor Perspectives in Medicine. 4. PMID 24384811 DOI: 10.1101/Cshperspect.A012518 |
0.597 |
|
| 2012 |
Macvanin M, Edgar R, Cui F, Trostel A, Zhurkin V, Adhya S. Noncoding RNAs binding to the nucleoid protein HU in Escherichia coli. Journal of Bacteriology. 194: 6046-55. PMID 22942248 DOI: 10.1128/Jb.00961-12 |
0.342 |
|
| 2012 |
Qian Z, Dimitriadis EK, Edgar R, Eswaramoorthy P, Adhya S. Galactose repressor mediated intersegmental chromosomal connections in Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 109: 11336-41. PMID 22733746 DOI: 10.1073/Pnas.1208595109 |
0.344 |
|
| 2012 |
Macvanin M, Adhya S. Architectural organization in E. coli nucleoid. Biochimica Et Biophysica Acta. 1819: 830-5. PMID 22387214 DOI: 10.1016/J.Bbagrm.2012.02.012 |
0.395 |
|
| 2012 |
Dimitriadis EK, Qian Z, Adhya S. GalR Mediated Interactions Across the E. Coli Chromosome Biophysical Journal. 102. DOI: 10.1016/J.Bpj.2011.11.427 |
0.346 |
|
| 2011 |
Koli P, Sudan S, Fitzgerald D, Adhya S, Kar S. Conversion of commensal Escherichia coli K-12 to an invasive form via expression of a mutant histone-like protein. Mbio. 2. PMID 21896677 DOI: 10.1128/Mbio.00182-11 |
0.368 |
|
| 2011 |
Lewis D, Le P, Zurla C, Finzi L, Adhya S. Multilevel autoregulation of λ repressor protein CI by DNA looping in vitro Proceedings of the National Academy of Sciences of the United States of America. 108: 14807-14812. PMID 21873207 DOI: 10.1073/Pnas.1111221108 |
0.392 |
|
| 2011 |
Csiszovszki Z, Krishna S, Orosz L, Adhya S, Semsey S. Structure and function of the D-galactose network in enterobacteria. Mbio. 2: e00053-11. PMID 21712421 DOI: 10.1128/Mbio.00053-11 |
0.328 |
|
| 2011 |
Finzi L, Manzo C, Zurla C, Adhya S, Dunlap DD. Kinetic Studies of Lambda Repressor-Mediated DNA Looping Suggest Physiological Role for Non-Specific Binding Biophysical Journal. 100. DOI: 10.1016/J.Bpj.2010.12.587 |
0.358 |
|
| 2009 |
Krishna S, Orosz L, Sneppen K, Adhya S, Semsey S. Relation of intracellular signal levels and promoter activities in the gal regulon of Escherichia coli. Journal of Molecular Biology. 391: 671-8. PMID 19559028 DOI: 10.1016/J.Jmb.2009.06.043 |
0.335 |
|
| 2009 |
Semsey S, Krishna S, Erdossy J, Horváth P, Orosz L, Sneppen K, Adhya S. Dominant negative autoregulation limits steady-state repression levels in gene networks. Journal of Bacteriology. 191: 4487-91. PMID 19429616 DOI: 10.1128/Jb.00056-09 |
0.328 |
|
| 2009 |
Zurla C, Manzo C, Dunlap D, Lewis DEA, Adhya S, Finzi L. Direct demonstration and quantification of long-range DNA looping by the λ bacteriophage repressor Nucleic Acids Research. 37: 2789-2795. PMID 19276206 DOI: 10.1093/Nar/Gkp134 |
0.355 |
|
| 2008 |
Hong J, Kim KP, Heu S, Lee SJ, Adhya S, Ryu S. Identification of host receptor and receptor-binding module of a newly sequenced T5-like phage EPS7. Fems Microbiology Letters. 289: 202-9. PMID 19025561 DOI: 10.1111/J.1574-6968.2008.01397.X |
0.404 |
|
| 2008 |
Lewis DE, Komissarova N, Le P, Kashlev M, Adhya S. DNA sequences in gal operon override transcription elongation blocks. Journal of Molecular Biology. 382: 843-58. PMID 18691599 DOI: 10.1016/J.Jmb.2008.07.060 |
0.414 |
|
| 2008 |
Lia G, Semsey S, Lewis DEA, Adhya S, Bensimon D, Dunlap D, Finzi L. The antiparallel loops in gal DNA Nucleic Acids Research. 36: 4204-4210. PMID 18573800 DOI: 10.1093/Nar/Gkn389 |
0.362 |
|
| 2008 |
Edgar R, Rokney A, Feeney M, Semsey S, Kessel M, Goldberg MB, Adhya S, Oppenheim AB. Bacteriophage infection is targeted to cellular poles. Molecular Microbiology. 68: 1107-16. PMID 18363799 DOI: 10.1111/J.1365-2958.2008.06205.X |
0.375 |
|
| 2008 |
Bair CL, Oppenheim A, Trostel A, Prag G, Adhya S. A phage display system designed to detect and study protein-protein interactions. Molecular Microbiology. 67: 719-28. PMID 18179417 DOI: 10.1111/J.1365-2958.2007.06077.X |
0.332 |
|
| 2007 |
Semsey S, Krishna S, Sneppen K, Adhya S. Signal integration in the galactose network of Escherichia coli. Molecular Microbiology. 65: 465-76. PMID 17630975 DOI: 10.1111/J.1365-2958.2007.05798.X |
0.363 |
|
| 2007 |
Guo F, Adhya S. Spiral structure of Escherichia coli HUalphabeta provides foundation for DNA supercoiling. Proceedings of the National Academy of Sciences of the United States of America. 104: 4309-14. PMID 17360520 DOI: 10.1073/Pnas.0611686104 |
0.357 |
|
| 2006 |
Kar S, Choi EJ, Guo F, Dimitriadis EK, Kotova SL, Adhya S. Right-handed DNA supercoiling by an octameric form of histone-like protein HU: modulation of cellular transcription. The Journal of Biological Chemistry. 281: 40144-53. PMID 17062578 DOI: 10.1074/Jbc.M605576200 |
0.397 |
|
| 2006 |
Wilder PT, Lin J, Bair CL, Charpentier TH, Yang D, Liriano M, Varney KM, Lee A, Oppenheim AB, Adhya S, Carrier F, Weber DJ. Recognition of the tumor suppressor protein p53 and other protein targets by the calcium-binding protein S100B. Biochimica Et Biophysica Acta. 1763: 1284-97. PMID 17010455 DOI: 10.1016/J.Bbamcr.2006.08.024 |
0.3 |
|
| 2006 |
Sukhodolets MV, Garges S, Adhya S. Ribosomal protein S1 promotes transcriptional cycling. Rna (New York, N.Y.). 12: 1505-13. PMID 16775305 DOI: 10.1261/Rna.2321606 |
0.327 |
|
| 2006 |
Edgar R, McKinstry M, Hwang J, Oppenheim AB, Fekete RA, Giulian G, Merril C, Nagashima K, Adhya S. High-sensitivity bacterial detection using biotin-tagged phage and quantum-dot nanocomplexes. Proceedings of the National Academy of Sciences of the United States of America. 103: 4841-5. PMID 16549760 DOI: 10.1073/Pnas.0601211103 |
0.304 |
|
| 2006 |
Semsey S, Virnik K, Adhya S. Three-stage regulation of the amphibolic gal operon: from repressosome to GalR-free DNA. Journal of Molecular Biology. 358: 355-63. PMID 16524589 DOI: 10.1016/J.Jmb.2006.02.022 |
0.418 |
|
| 2006 |
Zurla C, Franzini A, Galli G, Dunlap DD, Lewis DEA, Adhya S, Finzi L. Novel tethered particle motion analysis of CI protein-mediated DNA looping in the regulation of bacteriophage lambda Journal of Physics Condensed Matter. 18: S225-S234. DOI: 10.1088/0953-8984/18/14/S07 |
0.335 |
|
| 2005 |
Oppenheim AB, Kobiler O, Stavans J, Court DL, Adhya S. Switches in bacteriophage lambda development. Annual Review of Genetics. 39: 409-29. PMID 16285866 DOI: 10.1146/Annurev.Genet.39.073003.113656 |
0.309 |
|
| 2005 |
Kar S, Edgar R, Adhya S. Nucleoid remodeling by an altered HU protein: reorganization of the transcription program. Proceedings of the National Academy of Sciences of the United States of America. 102: 16397-402. PMID 16258062 DOI: 10.1073/Pnas.0508032102 |
0.379 |
|
| 2005 |
Vitiello CL, Merril CR, Adhya S. An amino acid substitution in a capsid protein enhances phage survival in mouse circulatory system more than a 1000-fold. Virus Research. 114: 101-3. PMID 16055223 DOI: 10.1016/J.Virusres.2005.05.014 |
0.341 |
|
| 2005 |
Tolstorukov MY, Virnik KM, Adhya S, Zhurkin VB. A-tract clusters may facilitate DNA packaging in bacterial nucleoid. Nucleic Acids Research. 33: 3907-18. PMID 16024741 DOI: 10.1093/Nar/Gki699 |
0.39 |
|
| 2005 |
Semsey S, Virnik K, Adhya S. A gamut of loops: meandering DNA. Trends in Biochemical Sciences. 30: 334-41. PMID 15950878 DOI: 10.1016/J.Tibs.2005.04.009 |
0.376 |
|
| 2005 |
Roy S, Dimitriadis EK, Kar S, Geanacopoulos M, Lewis MS, Adhya S. Gal repressor-operator-HU ternary complex: pathway of repressosome formation. Biochemistry. 44: 5373-80. PMID 15807530 DOI: 10.1021/Bi047720T |
0.398 |
|
| 2005 |
Svenningsen SL, Costantino N, Court DL, Adhya S. On the role of Cro in lambda prophage induction. Proceedings of the National Academy of Sciences of the United States of America. 102: 4465-9. PMID 15728734 DOI: 10.1073/Pnas.0409839102 |
0.704 |
|
| 2004 |
Roy S, Semsey S, Liu M, Gussin GN, Adhya S. GalR represses galP1 by inhibiting the rate-determining open complex formation through RNA polymerase contact: a GalR negative control mutant. Journal of Molecular Biology. 344: 609-18. PMID 15533432 DOI: 10.1016/J.Jmb.2004.09.070 |
0.36 |
|
| 2004 |
Lewis DE, Adhya S. Axiom of determining transcription start points by RNA polymerase in Escherichia coli. Molecular Microbiology. 54: 692-701. PMID 15491360 DOI: 10.1111/J.1365-2958.2004.04318.X |
0.37 |
|
| 2004 |
Liu M, Garges S, Adhya S. lacP1 promoter with an extended -10 motif. Pleiotropic effects of cyclic AMP protein at different steps of transcription initiation. The Journal of Biological Chemistry. 279: 54552-7. PMID 15385551 DOI: 10.1074/Jbc.M408609200 |
0.35 |
|
| 2004 |
Semsey S, Tolstorukov MY, Virnik K, Zhurkin VB, Adhya S. DNA trajectory in the Gal repressosome. Genes & Development. 18: 1898-907. PMID 15289461 DOI: 10.1101/Gad.1209404 |
0.401 |
|
| 2004 |
Liu M, Tolstorukov M, Zhurkin V, Garges S, Adhya S. A mutant spacer sequence between -35 and -10 elements makes the Plac promoter hyperactive and cAMP receptor protein-independent. Proceedings of the National Academy of Sciences of the United States of America. 101: 6911-6. PMID 15118087 DOI: 10.1073/Pnas.0401929101 |
0.37 |
|
| 2004 |
Lee HJ, Lim HM, Adhya S. An unsubstituted C2 hydrogen of adenine is critical and sufficient at the -11 position of a promoter to signal base pair deformation. The Journal of Biological Chemistry. 279: 16899-902. PMID 14990576 DOI: 10.1074/Jbc.C400054200 |
0.31 |
|
| 2004 |
Roy S, Lim HM, Liu M, Adhya S. Asynchronous basepair openings in transcription initiation: CRP enhances the rate-limiting step. The Embo Journal. 23: 869-75. PMID 14963488 DOI: 10.1038/Sj.Emboj.7600098 |
0.312 |
|
| 2004 |
Scholl D, Kieleczawa J, Kemp P, Rush J, Richardson CC, Merril C, Adhya S, Molineux IJ. Genomic analysis of bacteriophages SP6 and K1-5, an estranged subgroup of the T7 supergroup. Journal of Molecular Biology. 335: 1151-71. PMID 14729334 DOI: 10.1016/J.Jmb.2003.11.035 |
0.335 |
|
| 2003 |
Gupta A, Onda M, Pastan I, Adhya S, Chaudhary VK. High-density functional display of proteins on bacteriophage lambda. Journal of Molecular Biology. 334: 241-54. PMID 14607116 DOI: 10.1016/J.Jmb.2003.09.033 |
0.398 |
|
| 2003 |
Virnik K, Lyubchenko YL, Karymov MA, Dahlgren P, Tolstorukov MY, Semsey S, Zhurkin VB, Adhya S. "Antiparallel" DNA loop in gal repressosome visualized by atomic force microscopy. Journal of Molecular Biology. 334: 53-63. PMID 14596799 DOI: 10.1016/J.Jmb.2003.09.030 |
0.406 |
|
| 2003 |
Lia G, Bensimon D, Croquette V, Allemand JF, Dunlap D, Lewis DEA, Adhya S, Finzi L. Supercoiling and denaturation in Gal repressor/heat unstable nucleoid protein (HU)-mediated DNA looping Proceedings of the National Academy of Sciences of the United States of America. 100: 11373-11377. PMID 14500788 DOI: 10.1073/Pnas.2034851100 |
0.396 |
|
| 2003 |
Lim HM, Lewis DE, Lee HJ, Liu M, Adhya S. Effect of varying the supercoiling of DNA on transcription and its regulation. Biochemistry. 42: 10718-25. PMID 12962496 DOI: 10.1021/Bi030110T |
0.401 |
|
| 2003 |
Adhya S. Suboperonic regulatory signals. Science's Stke : Signal Transduction Knowledge Environment. 2003: pe22. PMID 12783981 DOI: 10.1126/Stke.2003.185.Pe22 |
0.348 |
|
| 2002 |
Semsey S, Geanacopoulos M, Lewis DE, Adhya S. Operator-bound GalR dimers close DNA loops by direct interaction: tetramerization and inducer binding. The Embo Journal. 21: 4349-56. PMID 12169637 DOI: 10.1093/Emboj/Cdf431 |
0.412 |
|
| 2002 |
Geanacopoulos M, Adhya S. Genetic analysis of GalR tetramerization in DNA looping during repressosome assembly. The Journal of Biological Chemistry. 277: 33148-52. PMID 12065579 DOI: 10.1074/Jbc.M202445200 |
0.367 |
|
| 2002 |
Roy S, Sahu A, Adhya S. Evolution of DNA binding motifs and operators. Gene. 285: 169-73. PMID 12039043 DOI: 10.1016/S0378-1119(02)00413-4 |
0.41 |
|
| 2002 |
Scholl D, Adhya S, Merrill CR. Bacteriophage SP6 is closely related to phages K1-5, K5, and K1E but encodes a tail protein very similar to that of the distantly related P22 Journal of Bacteriology. 184: 2833-2836. PMID 11976314 DOI: 10.1128/Jb.184.10.2833-2836.2002 |
0.308 |
|
| 2002 |
Biswas B, Adhya S, Washart P, Paul B, Trostel AN, Powell B, Carlton R, Merril CR. Bacteriophage therapy rescues mice bacteremic from a clinical isolate of vancomycin-resistant Enterococcus faecium. Infection and Immunity. 70: 204-10. PMID 11748184 DOI: 10.1128/Iai.70.1.204-210.2002 |
0.631 |
|
| 2002 |
Lewis DE, Adhya S. In vitro repression of the gal promoters by GalR and HU depends on the proper helical phasing of the two operators. The Journal of Biological Chemistry. 277: 2498-504. PMID 11700313 DOI: 10.1074/Jbc.M108456200 |
0.407 |
|
| 2001 |
Lim HM, Lee HJ, Roy S, Adhya S. A “master” in base unpairing during isomerization of a promoter upon RNA polymerase binding Proceedings of the National Academy of Sciences of the United States of America. 98: 14849-14852. PMID 11734629 DOI: 10.1073/Pnas.261517398 |
0.3 |
|
| 2001 |
Kar S, Adhya S. Recruitment of HU by piggyback: A special role of GalR m repressosome assembly Genes and Development. 15: 2273-2281. PMID 11544184 DOI: 10.1101/Gad.920301 |
0.392 |
|
| 2001 |
Geanacopoulos M, Vasmatzis G, Zhurkin VB, Adhya S. Gal repressosome contains an antiparallel DNA loop. Nature Structural & Molecular Biology. 8: 432-436. PMID 11323719 DOI: 10.1038/87595 |
0.394 |
|
| 2001 |
Scholl D, Rogers S, Adhya S, Merril CR. Bacteriophage K1-5 encodes two different tail fiber proteins, allowing it to infect and replicate on both K1 and K5 strains of Escherichia coli Journal of Virology. 75: 2509-2515. PMID 11222673 DOI: 10.1128/Jvi.75.6.2509-2515.2001 |
0.368 |
|
| 1999 |
Adhya S, Geanacopoulos M, Lewis DE, Roy S, Aki T. Transcription regulation by repressosome and by RNA polymerase contact. Cold Spring Harbor Symposia On Quantitative Biology. 63: 1-9. PMID 10384265 DOI: 10.1101/Sqb.1998.63.1 |
0.367 |
|
| 1999 |
Geanacopoulos M, Vasmatzis G, Lewis DEA, Roy S, Lee B, Adhya S. GalR mutants defective in repressosome formation Genes & Development. 13: 1251-1262. PMID 10346814 DOI: 10.1101/Gad.13.10.1251 |
0.415 |
|
| 1999 |
Lewis DEA, Geanacopoulos M, Adhya S. Role of HU and DNA supercoiling in transcription repression: specialized nucleoprotein repression complex at gal promoters in Escherichia coli Molecular Microbiology. 31: 451-461. PMID 10027963 DOI: 10.1046/J.1365-2958.1999.01186.X |
0.398 |
|
| 1998 |
Ryu S, Fujita N, Ishihama A, Adhya S. GalR-mediated repression and activation of hybrid lacUV5 promoter: differential contacts with RNA polymerase Gene. 223: 235-245. PMID 9858739 DOI: 10.1016/S0378-1119(98)00237-6 |
0.395 |
|
| 1998 |
Roy S, Garges S, Adhya S. Activation and Repression of Transcription by Differential Contact: Two Sides of a Coin Journal of Biological Chemistry. 273: 14059-14062. PMID 9603899 DOI: 10.1074/Jbc.273.23.14059 |
0.35 |
|
| 1998 |
Rajendrakumar GV, Adhya S. Fluorescence-Based Protein Footprinting Using Histidine-Tagged Protein Biotechniques. 24: 110-115. PMID 9454962 DOI: 10.2144/98241St04 |
0.32 |
|
| 1997 |
Choy HE, Hanger RR, Aki T, Mahoney M, Murakami K, Ishihama A, Adhya S. Repression and activation of promoter-bound RNA polymerase activity by Gal repressor. Journal of Molecular Biology. 272: 293-300. PMID 9325090 DOI: 10.1006/Jmbi.1997.1221 |
0.374 |
|
| 1997 |
Aki T, Adhya S. Repressor induced site‐specific binding of HU for transcriptional regulation The Embo Journal. 16: 3666-3674. PMID 9218807 DOI: 10.1093/Emboj/16.12.3666 |
0.398 |
|
| 1997 |
Chatterjee S, Zhou Y, Roy S, Adhya S. Interaction of Gal repressor with inducer and operator: Induction of gal transcription from repressor-bound DNA Proceedings of the National Academy of Sciences of the United States of America. 94: 2957-2962. PMID 9096328 DOI: 10.1073/Pnas.94.7.2957 |
0.352 |
|
| 1997 |
Lyubchenko YL, Shlyakhtenko LS, Aki T, Adhya S. Atomic force microscopic demonstration of DNA looping by GalR and HU. Nucleic Acids Research. 25: 873-876. PMID 9016640 DOI: 10.1093/Nar/25.4.873 |
0.401 |
|
| 1997 |
Geanacopoulos M, Adhya S. Functional characterization of roles of GalR and GalS as regulators of the gal regulon. Journal of Bacteriology. 179: 228-234. PMID 8982002 DOI: 10.1128/Jb.179.1.228-234.1997 |
0.324 |
|
| 1996 |
Aki T, Choy HE, Adhya S. Histone-like protein HU as a specific transcriptional regulator: co-factor role in repression of gal transcription by GAL repressor. Genes to Cells. 1: 179-188. PMID 9140062 DOI: 10.1046/J.1365-2443.1996.D01-236.X |
0.385 |
|
| 1996 |
Merril CR, Biswas B, Carlton R, Jensen NC, Creed GJ, Zullo S, Adhya S. Long-circulating bacteriophage as antibacterial agents Proceedings of the National Academy of Sciences of the United States of America. 93: 3188-3192. PMID 8622911 DOI: 10.1073/Pnas.93.8.3188 |
0.361 |
|
| 1995 |
Adhya S, Ryu S, Garges S. Role of allosteric changes in cyclic AMP receptor protein function. Sub-Cellular Biochemistry. 24: 303-21. PMID 7900180 DOI: 10.1007/978-1-4899-1727-0_10 |
0.333 |
|
| 1995 |
Ivanov VI, Minchenkova LE, Chernov BK, McPhie P, Ryu S, Garges S, Barber AM, Zhurkin VB, Adhya S. CRP-DNA complexes: Inducing the A-like form in the binding sites with an extended central spacer Journal of Molecular Biology. 245: 228-240. PMID 7844815 DOI: 10.1006/Jmbi.1994.0019 |
0.39 |
|
| 1995 |
Choy HE, Park S-, Parrack P, Adhya S. Transcription regulation by inflexibility of promoter DNA in a looped complex Proceedings of the National Academy of Sciences of the United States of America. 92: 7327-7331. PMID 7638190 DOI: 10.1073/Pnas.92.16.7327 |
0.416 |
|
| 1995 |
Zhou YN, Chatterjee S, Roy S, Adhya S. The non-inducible nature of super-repressors of the gal operon in Escherichia coli. Journal of Molecular Biology. 253: 414-25. PMID 7473724 DOI: 10.1006/Jmbi.1995.0563 |
0.394 |
|
| 1995 |
Choy HE, Park SW, Aki T, Parrack P, Fujita N, Ishihama A, Adhya S. Repression and activation of transcription by Gal and Lac repressors: involvement of alpha subunit of RNA polymerase. The Embo Journal. 14: 4523-4529. DOI: 10.1002/J.1460-2075.1995.Tb00131.X |
0.353 |
|
| 1994 |
Zwieb C, Adhya S. Improved plasmid vectors for the analysis of protein-induced DNA bending. Methods of Molecular Biology. 30: 281-294. PMID 8004202 DOI: 10.1385/0-89603-256-6:281 |
0.348 |
|
| 1994 |
Ryu S, Garges S, Adhya S. An arcane role of DNA in transcription activation. Proceedings of the National Academy of Sciences of the United States of America. 91: 11281. PMID 7972048 DOI: 10.1073/Pnas.91.23.11281B |
0.359 |
|
| 1994 |
Ryu S, Garges S, Adhya S. An arcane role of DNA in transcription activation. Proceedings of the National Academy of Sciences of the United States of America. 91: 8582-6. PMID 7811325 DOI: 10.1073/Pnas.91.18.8582 |
0.416 |
|
| 1993 |
Weickert MJ, Adhya S. Control of transcription of gal repressor and isorepressor genes in Escherichia coli. Journal of Bacteriology. 175: 251-258. PMID 8416900 DOI: 10.1128/Jb.175.1.251-258.1993 |
0.352 |
|
| 1993 |
Adhya S, Gottesman M, Garges S, Oppenheim A. Promoter resurrection by activators--a minireview. Gene. 132: 1-6. PMID 8406030 DOI: 10.1016/0378-1119(93)90507-Y |
0.396 |
|
| 1993 |
Barber AM, Zhurkin VB, Adhya S. CRP-binding sites: evidence for two structural classes with 6-bp and 8-bp spacers Gene. 130: 1-8. PMID 8393822 DOI: 10.1016/0378-1119(93)90339-5 |
0.362 |
|
| 1993 |
Choy HE, Adhya S. RNA polymerase idling and clearance in gal promoters: use of supercoiled minicircle DNA template made in vivo. Proceedings of the National Academy of Sciences of the United States of America. 90: 472-476. PMID 8380640 DOI: 10.1073/Pnas.90.2.472 |
0.378 |
|
| 1993 |
Ryu S, Kim J, Adhya S, Garges S. Pivotal role of amino acid at position 138 in the allosteric hinge reorientation of cAMP receptor protein. Proceedings of the National Academy of Sciences of the United States of America. 90: 75-9. PMID 8380500 DOI: 10.1073/Pnas.90.1.75 |
0.379 |
|
| 1993 |
Weickert MJ, Adhya S. The galactose regulon of Escherichia coli. Molecular Microbiology. 10: 245-251. PMID 7934815 DOI: 10.1111/J.1365-2958.1993.Tb01950.X |
0.333 |
|
| 1992 |
Weickert MJ, Adhya S. Isorepressor of the gal regulon in Escherichia coli. Journal of Molecular Biology. 226: 69-83. PMID 1619663 DOI: 10.1016/0022-2836(92)90125-4 |
0.375 |
|
| 1992 |
Choy HE, Adhya S. Control of gal transcription through DNA looping: inhibition of the initial transcribing complex. Proceedings of the National Academy of Sciences of the United States of America. 89: 11264-11268. PMID 1454806 DOI: 10.1073/Pnas.89.23.11264 |
0.422 |
|
| 1992 |
Kim J, Adhya S, Garges S. Allosteric changes in the cAMP receptor protein of Escherichia coli: hinge reorientation. Proceedings of the National Academy of Sciences of the United States of America. 89: 9700-9704. PMID 1409686 DOI: 10.1073/Pnas.89.20.9700 |
0.325 |
|
| 1992 |
Fox DK, Presper KA, Adhya S, Roseman S, Garges S. Evidence for two promoters upstream of the pts operon: regulation by the cAMP receptor protein regulatory complex. Proceedings of the National Academy of Sciences of the United States of America. 89: 7056-9. PMID 1323126 DOI: 10.1073/Pnas.89.15.7056 |
0.368 |
|
| 1991 |
Tokeson JPE, Garges S, Adhya S. Further inducibility of a constitutive system: ultrainduction of the gal operon. Journal of Bacteriology. 173: 2319-2327. PMID 2007555 DOI: 10.1128/Jb.173.7.2319-2327.1991 |
0.398 |
|
| 1991 |
Golding A, Weickert MJ, Tokeson JPE, Garges S, Adhya S. A mutation defining ultrainduction of the Escherichia coli gal operon. Journal of Bacteriology. 173: 6294-6296. PMID 1655705 DOI: 10.1128/Jb.173.19.6294-6296.1991 |
0.342 |
|
| 1990 |
Adhya S. Multipartite genetic control elements: communication by DNA loop. Annual Review of Genetics. 23: 227-50. PMID 2694932 DOI: 10.1146/Annurev.Ge.23.120189.001303 |
0.381 |
|
| 1990 |
Brenowitz M, Jamison E, Majumdar A, Adhya S. Interaction of the Escherichia coli gal repressor protein with its DNA operators in vitro Biochemistry. 29: 3374-3383. PMID 2185837 DOI: 10.1021/Bi00465A033 |
0.345 |
|
| 1990 |
Ren YL, Garges S, Adhya S, Krakow JS. Characterization of the binding of cAMP and cGMP to the CRP*598 mutant of the E. coli cAMP receptor protein Nucleic Acids Research. 18: 5127-5132. PMID 2169605 DOI: 10.1093/Nar/18.17.5127 |
0.325 |
|
| 1989 |
Zwieb C, Kim J, Adhya S. DNA bending by negative regulatory proteins: Gal and Lac repressors. Genes & Development. 3: 606-611. PMID 2744457 DOI: 10.1101/Gad.3.5.606 |
0.381 |
|
| 1989 |
Majumdar A, Adhya S. Effect of ethylation of operator-phosphates on Gal represser binding. DNA contortion by repressor Journal of Molecular Biology. 208: 217-223. PMID 2671389 DOI: 10.1016/0022-2836(89)90383-5 |
0.366 |
|
| 1989 |
Irani M, Musso R, Adhya S. Cyclic-AMP-dependent switch in initiation of transcription from the two promoters of the Escherichia coli gal operon: Identification and assay of 5'-triphosphate ends of mRNA by GTP/RNA guanyltransferase Journal of Bacteriology. 171: 1623-1630. PMID 2537823 DOI: 10.1128/Jb.171.3.1623-1630.1989 |
0.328 |
|
| 1989 |
Kim J, Zwieb CW, Wu C, Adhya S. Bending of DNA by gene-regulatory proteins: construction and use of a DNA bending vector Gene. 85: 15-23. PMID 2533576 DOI: 10.1016/0378-1119(89)90459-9 |
0.418 |
|
| 1988 |
Haber R, Adhya S. Interaction of spatially separated protein-DNA complexes for control of gene expression: operator conversions. Proceedings of the National Academy of Sciences of the United States of America. 85: 9683-9687. PMID 3059350 DOI: 10.1073/Pnas.85.24.9683 |
0.359 |
|
| 1988 |
Ren YL, Garges S, Adhya S, Krakow JS. Cooperative DNA binding of heterologous proteins: evidence for contact between the cyclic AMP receptor protein and RNA polymerase. Proceedings of the National Academy of Sciences of the United States of America. 85: 4138-4142. PMID 2837757 DOI: 10.1073/Pnas.85.12.4138 |
0.375 |
|
| 1987 |
Haber R, Adhya S. Autoregulation of gene expression: rho Journal of Biosciences. 11: 225-230. DOI: 10.1007/Bf02704672 |
0.354 |
|
| 1985 |
Garges S, Adhya S. Sites of allosteric shift in the structure of the cyclic AMP receptor protein Cell. 41: 745-751. PMID 2988785 DOI: 10.1016/S0092-8674(85)80055-6 |
0.335 |
|
| 1984 |
Majumdar A, Adhya S. Demonstration of two operator elements in gal: in vitro repressor binding studies Proceedings of the National Academy of Sciences of the United States of America. 81: 6100-6104. PMID 6385008 DOI: 10.1073/Pnas.81.19.6100 |
0.441 |
|
| 1983 |
Irani M, Orosz L, Busby S, Taniguchi T, Adhya S. Cyclic AMP-dependent constitutive expression of gal operon: use of repressor titration to isolate operator mutations. Proceedings of the National Academy of Sciences of the United States of America. 80: 4775-9. PMID 6308647 DOI: 10.1073/Pnas.80.15.4775 |
0.339 |
|
| 1983 |
Irani MH, Orosz L, Adhya S. A control element within a structural gene: the gal operon of Escherichia coli. Cell. 32: 783-8. PMID 6299576 DOI: 10.1016/0092-8674(83)90064-8 |
0.391 |
|
| 1980 |
Gottesman ME, Adhya S, Das A. Transcription antitermination by bacteriophage lambda N gene product. Journal of Molecular Biology. 140: 57-75. PMID 6447798 DOI: 10.1016/0022-2836(80)90356-3 |
0.367 |
|
| 1979 |
Reyes O, Gottesman M, Adhya S. Formation of lambda lysogens by IS2 recombination: gal operon--lambda pR promoter fusions. Virology. 94: 400-408. PMID 377790 DOI: 10.1016/0042-6822(79)90470-7 |
0.345 |
|
| 1979 |
Adhya S, Miller W. Modulation of the two promoters of the galactose operon of Escherichia coli. Nature. 279: 492-494. PMID 221830 DOI: 10.1038/279492A0 |
0.347 |
|
| 1979 |
Das A, Merril C, Adhya S. Interaction of RNA polymerase and rho in transcription termination: coupled ATPase. Proceedings of the National Academy of Sciences of the United States of America. 75: 4828-32. PMID 154103 DOI: 10.1073/Pnas.75.10.4828 |
0.33 |
|
| 1978 |
Adhya S, Gottesman M. Control of Transcription Termination Annual Review of Biochemistry. 47: 967-996. PMID 354508 DOI: 10.1146/Annurev.Bi.47.070178.004535 |
0.316 |
|
| 1978 |
Merril C, Gottesman M, Court D, Adhya S. Disco-ordinate expression of the Escherichia coli gal operon after prophage lambda induction. Journal of Molecular Biology. 118: 241-5. PMID 342710 DOI: 10.1016/0022-2836(78)90415-1 |
0.333 |
|
| 1978 |
Hilliker S, Gottesman M, Adhya S. The activity of Salmonella phage P22 gene 24 product in Escherichia coli. Virology. 86: 37-47. PMID 208254 DOI: 10.1016/0042-6822(78)90005-3 |
0.342 |
|
| 1977 |
Adhya S, Gottesman M, Court D. Independence of gene N and tof functions of bacteriophage lambda. Journal of Molecular Biology. 112: 657-60. PMID 875037 DOI: 10.1016/S0022-2836(77)80171-X |
0.305 |
|
| 1977 |
Weisberg RA, Adhya S. Illegitimate recombination in bacteria and bacteriophage. Annual Review of Genetics. 11: 451-73. PMID 339822 DOI: 10.1146/Annurev.Ge.11.120177.002315 |
0.317 |
|
| 1977 |
Musso RE, Lauro RD, Adhya S, Crombrugghe Bd. Dual control for transcription of the galactose operon by cyclic AMP and its receptor protein at two interspersed promoters Cell. 12: 847-854. PMID 200371 DOI: 10.1016/0092-8674(77)90283-5 |
0.381 |
|
| 1976 |
Das A, Court D, Adhya S. Isolation and characterization of conditional lethal mutants of Escherichia coli defective in transcription termination factor rho. Proceedings of the National Academy of Sciences of the United States of America. 73: 1959-63. PMID 132662 DOI: 10.1073/Pnas.73.6.1959 |
0.348 |
|
| 1976 |
Adhya S, Gottesman M, Crombrugghe BD, Court D. Transcription Termination Regulates Gene Expression Cold Spring Harbor Monograph Archive. 6: 719-730. DOI: 10.1101/087969115.6.719 |
0.372 |
|
| 1974 |
Adhya S, Gottesman M, De Crombrugghe B. Release of polarity in Escherichia coli by gene N of phage lambda: termination and antitermination of transcription. Proceedings of the National Academy of Sciences of the United States of America. 71: 2534-8. PMID 4601822 DOI: 10.1073/Pnas.71.6.2534 |
0.374 |
|
| 1974 |
Nakanishi S, Adhya S, Gottesman M, Pastan I. Effects of dimethylsulfoxide on the E. coli gal operon and on bacteriophage lambda in vivo. Cell. 3: 39-46. PMID 4369966 DOI: 10.1016/0092-8674(74)90035-X |
0.379 |
|
| 1974 |
Adhya S, Gottesman M, De Crombrugghe B. Termination and antitermination in transcription: control of gene expression. Basic Life Sciences. 3: 213-21. PMID 4362806 DOI: 10.1007/978-1-4613-4529-9_17 |
0.364 |
|
| 1973 |
De Crombrugghe B, Adhya S, Gottesman M, Pastan I. Effect of Rho on transcription of bacterial operons. Nature: New Biology. 241: 260-4. PMID 4348358 DOI: 10.1038/Newbio241260A0 |
0.34 |
|
| 1973 |
Nakanishi S, Adhya S, Gottesman ME, Pastan I. In vitro repression of the transcription of gas operon by purified gal repressor. Proceedings of the National Academy of Sciences of the United States of America. 70: 334-8. PMID 4346883 DOI: 10.1073/Pnas.70.2.334 |
0.373 |
|
| 1968 |
Adhya S, Cleary P, Campbell A. A deletion analysis of prophage lambda and adjacent genetic regions. Proceedings of the National Academy of Sciences of the United States of America. 61: 956-962. PMID 5246560 DOI: 10.1073/Pnas.61.3.956 |
0.608 |
|
| 1966 |
Adhya S, Echols H. Glucose effect and the galactose enzymes of Escherichia coli: correlation between glucose inhibition of induction and inducer transport. Journal of Bacteriology. 92: 601-8. PMID 5332079 DOI: 10.1128/Jb.92.3.601-608.1966 |
0.565 |
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