Esti Yeger-Lotem - Publications

Clinical Biochemistry & Pharmacology Ben-Gurion University of the Negev, Be'er Sheva, South District, Israel 
network biology

27 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Ziv M, Gruber G, Sharon M, Vinogradov E, Yeger-Lotem E. The TissueNet v.3 Database: Protein-protein Interactions in Adult and Embryonic Human Tissue contexts. Journal of Molecular Biology. 434: 167532. PMID 35662455 DOI: 10.1016/j.jmb.2022.167532  0.365
2020 Luck K, Kim DK, Lambourne L, Spirohn K, Begg BE, Bian W, Brignall R, Cafarelli T, Campos-Laborie FJ, Charloteaux B, Choi D, Coté AG, Daley M, Deimling S, Desbuleux A, ... ... Yeger-Lotem E, et al. A reference map of the human binary protein interactome. Nature. 580: 402-408. PMID 32296183 DOI: 10.1038/S41586-020-2188-X  0.517
2020 Basha O, Argov CM, Artzy R, Zoabi Y, Hekselman I, Alfandari L, Chalifa-Caspi V, Yeger-Lotem E. Differential network analysis of multiple human tissue interactomes highlights tissue-selective processes and genetic disorder genes. Bioinformatics (Oxford, England). PMID 31960892 DOI: 10.1093/Bioinformatics/Btaa034  0.477
2020 Hekselman I, Yeger-Lotem E. Mechanisms of tissue and cell-type specificity in heritable traits and diseases. Nature Reviews. Genetics. PMID 31913361 DOI: 10.1038/S41576-019-0200-9  0.322
2019 Basha O, Mauer O, Simonovsky E, Shpringer R, Yeger-Lotem E. ResponseNet v.3: revealing signaling and regulatory pathways connecting your proteins and genes across human tissues. Nucleic Acids Research. PMID 31114913 DOI: 10.1093/Nar/Gkz421  0.451
2018 Iacovella MG, Bremang M, Basha O, Giacò L, Carotenuto W, Golfieri C, Szakal B, Dal Maschio M, Infantino V, Beznoussenko GV, Joseph CR, Visintin C, Mironov AA, Visintin R, Branzei D, ... ... Yeger-Lotem E, et al. Integrating Rio1 activities discloses its nutrient-activated network in Saccharomyces cerevisiae. Nucleic Acids Research. PMID 30011030 DOI: 10.1093/Nar/Gky618  0.517
2018 Barshir R, Hekselman I, Shemesh N, Sharon M, Novack L, Yeger-Lotem E. Role of duplicate genes in determining the tissue-selectivity of hereditary diseases. Plos Genetics. 14: e1007327. PMID 29723191 DOI: 10.1371/Journal.Pgen.1007327  0.318
2018 Perez Y, Menascu S, Cohen I, Kadir R, Basha O, Shorer Z, Romi H, Meiri G, Rabinski T, Ofir R, Yeger-Lotem E, Birk OS. RSRC1 mutation affects intellect and behaviour through aberrant splicing and transcription, downregulating IGFBP3. Brain : a Journal of Neurology. PMID 29522154 DOI: 10.1093/Brain/Awy045  0.364
2017 Basha O, Shpringer R, Argov CM, Yeger-Lotem E. The DifferentialNet database of differential protein-protein interactions in human tissues. Nucleic Acids Research. PMID 29069447 DOI: 10.1093/Nar/Gkx981  0.393
2017 Smoly IY, Lerman E, Ziv-Ukelson M, Yeger-Lotem E. MotifNet: A web-server for network motif analysis. Bioinformatics (Oxford, England). PMID 28165111 DOI: 10.1093/Bioinformatics/Btx056  0.417
2017 Smoly I, Shemesh N, Ziv-Ukelson M, Ben-Zvi A, Yeger-Lotem E. An Asymmetrically Balanced Organization of Kinases versus Phosphatases across Eukaryotes Determines Their Distinct Impacts. Plos Computational Biology. 13: e1005221. PMID 28135269 DOI: 10.1371/Journal.Pcbi.1005221  0.352
2016 Bar-Lavan Y, Shemesh N, Dror S, Ofir R, Yeger-Lotem E, Ben-Zvi A. A Differentiation Transcription Factor Establishes Muscle-Specific Proteostasis in Caenorhabditis elegans. Plos Genetics. 12: e1006531. PMID 28036392 DOI: 10.1371/Journal.Pgen.1006531  0.382
2016 Basha O, Barshir R, Sharon M, Lerman E, Kirson BF, Hekselman I, Yeger-Lotem E. The TissueNet v.2 database: A quantitative view of protein-protein interactions across human tissues. Nucleic Acids Research. PMID 27899616 DOI: 10.1093/Nar/Gkw1088  0.426
2016 Smoly I, Carmel A, Shemer-Avni Y, Yeger-Lotem E, Ziv-Ukelson M. Algorithms for Regular Tree Grammar Network Search and Their Application to Mining Human-viral Infection Patterns. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 23: 165-79. PMID 26953875 DOI: 10.1089/Cmb.2015.0168  0.379
2015 Yeger-Lotem E, Sharan R. Human protein interaction networks across tissues and diseases. Frontiers in Genetics. 6: 257. PMID 26347769 DOI: 10.3389/Fgene.2015.00257  0.517
2015 Basha O, Flom D, Barshir R, Smoly I, Tirman S, Yeger-Lotem E. MyProteinNet: build up-to-date protein interaction networks for organisms, tissues and user-defined contexts. Nucleic Acids Research. 43: W258-63. PMID 25990735 DOI: 10.1093/Nar/Gkv515  0.531
2015 Ransbotyn V, Yeger-Lotem E, Basha O, Acuna T, Verduyn C, Gordon M, Chalifa-Caspi V, Hannah MA, Barak S. A combination of gene expression ranking and co-expression network analysis increases discovery rate in large-scale mutant screens for novel Arabidopsis thaliana abiotic stress genes. Plant Biotechnology Journal. 13: 501-13. PMID 25370817 DOI: 10.1111/Pbi.12274  0.367
2014 Barshir R, Shwartz O, Smoly IY, Yeger-Lotem E. Comparative analysis of human tissue interactomes reveals factors leading to tissue-specific manifestation of hereditary diseases. Plos Computational Biology. 10: e1003632. PMID 24921629 DOI: 10.1371/Journal.Pcbi.1003632  0.406
2013 Lan A, Ziv-Ukelson M, Yeger-Lotem E. A context-sensitive framework for the analysis of human signalling pathways in molecular interaction networks. Bioinformatics (Oxford, England). 29: i210-6. PMID 23812986 DOI: 10.1093/Bioinformatics/Btt240  0.504
2013 Basha O, Tirman S, Eluk A, Yeger-Lotem E. ResponseNet2.0: Revealing signaling and regulatory pathways connecting your proteins and genes--now with human data. Nucleic Acids Research. 41: W198-203. PMID 23761447 DOI: 10.1093/Nar/Gkt532  0.45
2013 Barshir R, Basha O, Eluk A, Smoly IY, Lan A, Yeger-Lotem E. The TissueNet database of human tissue protein-protein interactions. Nucleic Acids Research. 41: D841-4. PMID 23193266 DOI: 10.1093/Nar/Gks1198  0.421
2011 Lan A, Smoly IY, Rapaport G, Lindquist S, Fraenkel E, Yeger-Lotem E. ResponseNet: Revealing signaling and regulatory networks linking genetic and transcriptomic screening data Nucleic Acids Research. 39: W424-W429. PMID 21576238 DOI: 10.1093/Nar/Gkr359  0.478
2009 Yeger-Lotem E, Riva L, Su LJ, Gitler AD, Cashikar AG, King OD, Auluck PK, Geddie ML, Valastyan JS, Karger DR, Lindquist S, Fraenkel E. Bridging high-throughput genetic and transcriptional data reveals cellular responses to alpha-synuclein toxicity. Nature Genetics. 41: 316-23. PMID 19234470 DOI: 10.1038/Ng.337  0.359
2005 Pinter RY, Rokhlenko O, Yeger-Lotem E, Ziv-Ukelson M. Alignment of metabolic pathways. Bioinformatics (Oxford, England). 21: 3401-8. PMID 15985496 DOI: 10.1093/Bioinformatics/Bti554  0.591
2005 Hershberg R, Yeger-Lotem E, Margalit H. Chromosomal organization is shaped by the transcription regulatory network. Trends in Genetics : Tig. 21: 138-42. PMID 15734572 DOI: 10.1016/J.Tig.2005.01.003  0.576
2004 Yeger-Lotem E, Sattath S, Kashtan N, Itzkovitz S, Milo R, Pinter RY, Alon U, Margalit H. Network motifs in integrated cellular networks of transcription-regulation and protein-protein interaction. Proceedings of the National Academy of Sciences of the United States of America. 101: 5934-9. PMID 15079056 DOI: 10.1073/Pnas.0306752101  0.642
2003 Yeger-Lotem E, Margalit H. Detection of regulatory circuits by integrating the cellular networks of protein-protein interactions and transcription regulation. Nucleic Acids Research. 31: 6053-61. PMID 14530453 DOI: 10.1093/Nar/Gkg787  0.637
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