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Michael Verzi, Ph.D. - Publications

Affiliations: 
2006 University of California, San Francisco, San Francisco, CA 
Area:
Molecular Biology, Neuroscience Biology
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41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Nguyen MU, Potgieter S, Huang W, Pfeffer J, Woo S, Zhao C, Lawlor M, Yang R, Halstead A, Dent S, Sáenz JB, Zheng H, Yuan ZF, Sidoli S, Ellison CE, ... Verzi M, et al. paralogs prevent dsRNA accumulation and interferon signaling to maintain intestinal stem cells. Biorxiv : the Preprint Server For Biology. PMID 37732252 DOI: 10.1101/2023.09.04.556156  0.328
2023 Vemuri K, Radi SH, Sladek FM, Verzi MP. Multiple roles and regulatory mechanisms of the transcription factor HNF4 in the intestine. Frontiers in Endocrinology. 14: 1232569. PMID 37635981 DOI: 10.3389/fendo.2023.1232569  0.335
2022 Bara AM, Chen L, Ma C, Underwood J, Moreci RS, Sumigray K, Sun T, Diao Y, Verzi M, Lechler T. Maf family transcription factors are required for nutrient uptake in the mouse neonatal gut. Development (Cambridge, England). 149. PMID 36504079 DOI: 10.1242/dev.201251  0.349
2022 Aita R, Aldea D, Hassan S, Hur J, Pellon-Cardenas O, Cohen E, Chen L, Shroyer N, Christakos S, Verzi MP, Fleet JC. Genomic Analysis of 1,25-dihydroxyvitamin D Action in Mouse Intestine Reveals Compartment and Segment-Specific Gene Regulatory Effects. The Journal of Biological Chemistry. 102213. PMID 35779631 DOI: 10.1016/j.jbc.2022.102213  0.314
2022 Fleet JC, Aldea D, Chen L, Christakos S, Verzi M. Regulatory domains controlling high intestinal vitamin D receptor (VDR) gene expression are conserved in mouse and human. The Journal of Biological Chemistry. 101616. PMID 35065959 DOI: 10.1016/j.jbc.2022.101616  0.304
2021 Mehta GA, Angus SP, Khella CA, Tong K, Khanna P, Dixon SAH, Verzi MP, Johnson GL, Gatza ML. SOX4 and SMARCA4 cooperatively regulate PI3k signaling through transcriptional activation of TGFBR2. Npj Breast Cancer. 7: 40. PMID 33837205 DOI: 10.1038/s41523-021-00248-2  0.413
2021 Suzuki K, Masuike Y, Mizuno R, Sachdeva UM, Chatterji P, Andres SF, Sun W, Klein-Szanto AJ, Besharati S, Remotti HE, Verzi MP, Rustgi AK. LIN28B induces a differentiation program through CDX2 in colon cancer. Jci Insight. PMID 33755595 DOI: 10.1172/jci.insight.140382  0.327
2021 Chen L, Cao W, Aita R, Aldea D, Flores J, Gao N, Bonder EM, Ellison CE, Verzi MP. Three-dimensional interactions between enhancers and promoters during intestinal differentiation depend upon HNF4. Cell Reports. 34: 108679. PMID 33503426 DOI: 10.1016/j.celrep.2020.108679  0.362
2020 Chen L, Marishta A, Ellison CE, Verzi MP. Identification of transcription factors regulating SARS-CoV-2 entry genes in the intestine. Cellular and Molecular Gastroenterology and Hepatology. PMID 32810597 DOI: 10.1016/J.Jcmgh.2020.08.005  0.347
2020 Wang H, Wang J, Zhao Y, Zhang X, Liu J, Zhang C, Haffty B, Verzi M, Zhang L, Gao N, Feng Z, Hu W. LIF is essential for ISC function and protects against radiation-induced gastrointestinal syndrome. Cell Death & Disease. 11: 588. PMID 32719388 DOI: 10.1038/S41419-020-02790-6  0.331
2020 Verzi MP, Shivdasani RA. Epigenetic regulation of intestinal stem cell differentiation. American Journal of Physiology. Gastrointestinal and Liver Physiology. PMID 32628072 DOI: 10.1152/Ajpgi.00084.2020  0.374
2019 Chen L, Toke NH, Luo S, Vasoya RP, Aita R, Parthasarathy A, Tsai YH, Spence JR, Verzi MP. HNF4 factors control chromatin accessibility and are redundantly required for maturation of the fetal intestine. Development (Cambridge, England). PMID 31345929 DOI: 10.1242/dev.179432  0.38
2019 Chen L, Toke NH, Luo S, Vasoya RP, Fullem RL, Parthasarathy A, Perekatt AO, Verzi MP. A reinforcing HNF4-SMAD4 feed-forward module stabilizes enterocyte identity. Nature Genetics. PMID 30988513 DOI: 10.1038/s41588-019-0384-0  0.448
2019 Kumar N, Tsai YH, Chen L, Zhou A, Banerjee KK, Saxena M, Huang S, Toke NH, Xing J, Shivdasani RA, Spence JR, Verzi MP. The lineage-specific transcription factor CDX2 navigates dynamic chromatin to control distinct stages of intestine development. Development (Cambridge, England). PMID 30745430 DOI: 10.1242/Dev.172189  0.338
2019 Ma X, Das NK, Castillo C, Gourani A, Perekatt AO, Verzi MP, Shah YM. SMAD family member 3 (SMAD3) and SMAD4 repress HIF2a-dependent iron-regulatory genes. The Journal of Biological Chemistry. PMID 30659096 DOI: 10.1074/Jbc.Ra118.005549  0.306
2018 Banerjee KK, Saxena M, Kumar N, Chen L, Cavazza A, Toke NH, O'Neill NK, Madha S, Jadhav U, Verzi MP, Shivdasani RA. Enhancer, transcriptional, and cell fate plasticity precedes intestinal determination during endoderm development. Genes & Development. PMID 30366903 DOI: 10.1101/Gad.318832.118  0.343
2018 Perekatt AO, Shah PP, Cheung S, Jariwala N, Wu A, Gandhi V, Kumar N, Feng Q, Patel N, Chen L, Joshi S, Zhou A, Taketo MM, Xing J, White E, ... ... Verzi M, et al. SMAD4 suppresses WNT-driven de-differentiation and oncogenesis in the differentiated gut epithelium. Cancer Research. PMID 29986996 DOI: 10.1158/0008-5472.Can-18-0043  0.305
2017 Chatterjee I, Kumar A, Castilla Madrigal RM, Pellon-Cardenas O, Gill RK, Alrefai WA, Borthakur A, Verzi M, Dudeja PK. CDX2 upregulates SLC26A3 gene expression in intestinal epithelial cells. American Journal of Physiology. Gastrointestinal and Liver Physiology. ajpgi.00108.2017. PMID 28572085 DOI: 10.1152/Ajpgi.00108.2017  0.463
2017 Singhal M, Chatterjee I, Manzella CR, Glofelty L, Verzi M, Saksena S, Alrefai WA, Dudeja PK, Gill RK. Caudal-Related Homeobox Transcription Factor 2 (CDX2) Regulates Serotonin Transporter Expression in Intestinal Epithelial Cells Gastroenterology. 152: S53. DOI: 10.1016/S0016-5085(17)30535-8  0.411
2015 Hu J, Verzi MP, Robinson AS, Tang PL, Hua LL, Xu SM, Kwok PY, Black BL. Endothelin signaling activates Mef2c expression in the neural crest through a MEF2C-dependent positive-feedback transcriptional pathway. Development (Cambridge, England). PMID 26160899 DOI: 10.1242/Dev.126391  0.562
2015 Guo Y, Lee JH, Shu L, Huang Y, Li W, Zhang C, Yang AY, Boyanapalli SS, Perekatt A, Hart RP, Verzi M, Kong AN. Association of aberrant DNA methylation in Apc(min/+) mice with the epithelial-mesenchymal transition and Wnt/β-catenin pathways: genome-wide analysis using MeDIP-seq. Cell & Bioscience. 5: 24. PMID 26101583 DOI: 10.1186/S13578-015-0013-2  0.306
2015 San Roman AK, Aronson BE, Krasinski SD, Shivdasani RA, Verzi MP. Transcription factors GATA4 and HNF4A control distinct aspects of intestinal homeostasis in conjunction with transcription factor CDX2. The Journal of Biological Chemistry. 290: 1850-60. PMID 25488664 DOI: 10.1074/Jbc.M114.620211  0.389
2014 Chahar S, Gandhi V, Yu S, Desai K, Cowper-Sal-lari R, Kim Y, Perekatt AO, Kumar N, Thackray JK, Musolf A, Kumar N, Hoffman A, Londono D, Vazquez BN, Serrano L, ... ... Verzi MP, et al. Chromatin profiling reveals regulatory network shifts and a protective role for hepatocyte nuclear factor 4α during colitis. Molecular and Cellular Biology. 34: 3291-304. PMID 24980432 DOI: 10.1128/Mcb.00349-14  0.341
2014 Aronson BE, Rabello Aronson S, Berkhout RP, Chavoushi SF, He A, Pu WT, Verzi MP, Krasinski SD. GATA4 represses an ileal program of gene expression in the proximal small intestine by inhibiting the acetylation of histone H3, lysine 27. Biochimica Et Biophysica Acta. 1839: 1273-82. PMID 24878542 DOI: 10.1016/j.bbagrm.2014.05.018  0.329
2014 Kim TH, Li F, Ferreiro-Neira I, Ho LL, Luyten A, Nalapareddy K, Long H, Verzi M, Shivdasani RA. Broadly permissive intestinal chromatin underlies lateral inhibition and cell plasticity. Nature. 506: 511-5. PMID 24413398 DOI: 10.1038/Nature12903  0.469
2013 Ho LL, Sinha A, Verzi M, Bernt KM, Armstrong SA, Shivdasani RA. DOT1L-mediated H3K79 methylation in chromatin is dispensable for Wnt pathway-specific and other intestinal epithelial functions. Molecular and Cellular Biology. 33: 1735-45. PMID 23428873 DOI: 10.1128/Mcb.01463-12  0.423
2013 Verzi MP, Shin H, San Roman AK, Liu XS, Shivdasani RA. Intestinal master transcription factor CDX2 controls chromatin access for partner transcription factor binding. Molecular and Cellular Biology. 33: 281-92. PMID 23129810 DOI: 10.1128/Mcb.01185-12  0.395
2011 Agarwal P, Verzi MP, Nguyen T, Hu J, Ehlers ML, McCulley DJ, Xu SM, Dodou E, Anderson JP, Wei ML, Black BL. The MADS box transcription factor MEF2C regulates melanocyte development and is a direct transcriptional target and partner of SOX10. Development (Cambridge, England). 138: 2555-65. PMID 21610032 DOI: 10.1242/Dev.056804  0.678
2011 Verzi MP, Shin H, Ho LL, Liu XS, Shivdasani RA. Essential and redundant functions of caudal family proteins in activating adult intestinal genes. Molecular and Cellular Biology. 31: 2026-39. PMID 21402776 DOI: 10.1128/Mcb.01250-10  0.366
2010 Verzi MP, Shin H, He HH, Sulahian R, Meyer CA, Montgomery RK, Fleet JC, Brown M, Liu XS, Shivdasani RA. Differentiation-specific histone modifications reveal dynamic chromatin interactions and partners for the intestinal transcription factor CDX2. Developmental Cell. 19: 713-26. PMID 21074721 DOI: 10.1016/J.Devcel.2010.10.006  0.401
2010 Horst D, Gu X, Bhasin M, Yang Q, Verzi M, Lin D, Joseph M, Zhang X, Chen W, Li YP, Shivdasani RA, Libermann TA. Requirement of the epithelium-specific Ets transcription factor Spdef for mucous gland cell function in the gastric antrum Journal of Biological Chemistry. 285: 35047-35055. PMID 20801882 DOI: 10.1074/Jbc.M110.164541  0.399
2010 Verzi MP, Hatzis P, Sulahian R, Philips J, Schuijers J, Shin H, Freed E, Lynch JP, Dang DT, Brown M, Clevers H, Liu XS, Shivdasani RA. TCF4 and CDX2, major transcription factors for intestinal function, converge on the same cis-regulatory regions. Proceedings of the National Academy of Sciences of the United States of America. 107: 15157-62. PMID 20696899 DOI: 10.1073/Pnas.1003822107  0.385
2009 Verzi MP, Stanfel MN, Moses KA, Kim BM, Zhang Y, Schwartz RJ, Shivdasani RA, Zimmer WE. Role of the homeodomain transcription factor Bapx1 in mouse distal stomach development. Gastroenterology. 136: 1701-10. PMID 19208343 DOI: 10.1053/J.Gastro.2009.01.009  0.352
2008 Verzi MP, Shivdasani RA. Wnt signaling in gut organogenesis. Organogenesis. 4: 87-91. PMID 19279719 DOI: 10.4161/Org.4.2.5854  0.308
2008 Verzi MP, Khan AH, Ito S, Shivdasani RA. Transcription factor foxq1 controls mucin gene expression and granule content in mouse stomach surface mucous cells. Gastroenterology. 135: 591-600. PMID 18558092 DOI: 10.1053/J.Gastro.2008.04.019  0.332
2008 Agarwal P, Verzi MP, Black BL. Genetic and functional interaction between transcription factors MEF2C and Dlx5/6 is required for craniofacial development Developmental Biology. 319: 595. DOI: 10.1016/J.Ydbio.2008.05.507  0.569
2007 Verzi MP, Agarwal P, Brown C, McCulley DJ, Schwarz JJ, Black BL. The transcription factor MEF2C is required for craniofacial development. Developmental Cell. 12: 645-52. PMID 17420000 DOI: 10.1016/J.Devcel.2007.03.007  0.64
2006 Ai D, Liu W, Ma L, Dong F, Lu MF, Wang D, Verzi MP, Cai C, Gage PJ, Evans S, Black BL, Brown NA, Martin JF. Pitx2 regulates cardiac left-right asymmetry by patterning second cardiac lineage-derived myocardium. Developmental Biology. 296: 437-49. PMID 16836994 DOI: 10.1016/J.Ydbio.2006.06.009  0.585
2005 Verzi MP, McCulley DJ, De Val S, Dodou E, Black BL. The right ventricle, outflow tract, and ventricular septum comprise a restricted expression domain within the secondary/anterior heart field. Developmental Biology. 287: 134-45. PMID 16188249 DOI: 10.1016/J.Ydbio.2005.08.041  0.548
2004 Dodou E, Verzi MP, Anderson JP, Xu SM, Black BL. Mef2c is a direct transcriptional target of ISL1 and GATA factors in the anterior heart field during mouse embryonic development. Development (Cambridge, England). 131: 3931-42. PMID 15253934 DOI: 10.1242/Dev.01256  0.631
2002 Verzi MP, Anderson JP, Dodou E, Kelly KK, Greene SB, North BJ, Cripps RM, Black BL. N-twist, an evolutionarily conserved bHLH protein expressed in the developing CNS, functions as a transcriptional inhibitor. Developmental Biology. 249: 174-90. PMID 12217327 DOI: 10.1006/Dbio.2002.0753  0.596
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